AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0439770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0439770 MtrunA17_Chr8g0386201 97.633 338 8 0 1 338 1 338 0.0 680
Msa0439770 MtrunA17_Chr8g0386201 46.715 274 110 4 342 584 43 311 2.46e-73 239
Msa0439770 MtrunA17_Chr8g0386171 64.353 317 68 2 338 609 46 362 5.78e-137 403
Msa0439770 MtrunA17_Chr8g0386171 43.544 333 143 3 11 311 18 337 2.57e-89 281
Msa0439770 MtrunA17_Chr5g0396351 45.659 311 163 4 1 310 1 306 3.14e-84 268
Msa0439770 MtrunA17_Chr5g0396351 39.544 263 135 4 342 581 43 304 1.22e-52 184
Msa0439770 MtrunA17_Chr8g0386191 71.264 174 18 6 378 548 34 178 2.48e-66 215
Msa0439770 MtrunA17_Chr8g0386191 38.961 154 61 6 126 275 54 178 1.28e-25 104
Msa0439770 MtrunA17_Chr7g0249571 33.778 225 139 7 43 260 36 257 5.17e-24 103
Msa0439770 MtrunA17_Chr7g0249571 30.457 197 117 4 340 517 34 229 2.10e-12 68.6
Msa0439770 MtrunA17_Chr3g0124471 29.134 254 153 9 49 289 30 269 9.88e-19 87.4
Msa0439770 MtrunA17_Chr7g0267011 28.061 196 129 5 43 232 6 195 4.70e-17 80.1
Msa0439770 MtrunA17_Chr8g0357481 31.390 223 137 6 40 250 9 227 5.70e-17 82.0
Msa0439770 MtrunA17_Chr4g0025981 31.863 204 116 6 347 531 44 243 2.22e-16 80.9
Msa0439770 MtrunA17_Chr4g0025981 25.652 230 151 6 47 266 43 262 1.49e-14 75.1
Msa0439770 MtrunA17_Chr4g0075531 27.111 225 146 4 41 252 3 222 2.48e-16 79.3
Msa0439770 MtrunA17_Chr3g0122901 27.232 224 147 7 43 263 73 283 3.20e-16 80.1
Msa0439770 MtrunA17_Chr3g0124481 28.390 236 149 9 63 289 30 254 4.75e-16 79.0
Msa0439770 MtrunA17_Chr4g0026001 29.703 202 121 5 347 530 17 215 1.10e-15 77.8
Msa0439770 MtrunA17_Chr4g0026001 26.512 215 142 7 47 253 16 222 1.65e-13 71.2
Msa0439770 MtrunA17_Chr4g0044131 28.495 186 121 5 47 226 10 189 1.29e-15 77.4
Msa0439770 MtrunA17_Chr2g0287951 30.180 222 132 7 45 250 33 247 1.33e-15 78.6
Msa0439770 MtrunA17_Chr1g0191751 28.061 196 132 4 42 229 97 291 1.93e-15 78.2
Msa0439770 MtrunA17_Chr7g0272961 26.400 250 171 6 40 277 34 282 2.34e-15 77.0
Msa0439770 MtrunA17_Chr7g0239491 30.088 226 143 8 47 267 17 232 1.06e-14 74.7
Msa0439770 MtrunA17_Chr4g0028921 28.358 201 135 6 43 235 9 208 2.70e-14 73.6
Msa0439770 MtrunA17_Chr6g0459281 28.426 197 129 6 45 234 13 204 3.23e-14 73.2
Msa0439770 MtrunA17_Chr7g0239511 29.310 232 144 9 44 267 15 234 5.89e-14 72.4
Msa0439770 MtrunA17_Chr4g0025971 30.500 200 117 5 334 517 7 200 8.27e-14 72.0
Msa0439770 MtrunA17_Chr4g0025971 26.606 218 138 5 47 253 16 222 1.01e-13 72.0
Msa0439770 MtrunA17_Chr4g0028911 27.861 201 136 6 43 235 9 208 1.13e-13 71.6
Msa0439770 MtrunA17_Chr4g0045061 27.500 200 133 4 46 233 5 204 1.24e-13 73.9
Msa0439770 MtrunA17_Chr4g0045061 27.136 199 120 4 350 523 10 208 3.40e-11 66.2
Msa0439770 MtrunA17_Chr6g0459261 28.788 198 127 6 45 234 25 216 1.92e-13 71.2
Msa0439770 MtrunA17_Chr1g0171831 27.000 200 134 5 48 235 17 216 4.26e-13 69.7
Msa0439770 MtrunA17_Chr4g0045041 26.500 200 135 4 46 233 5 204 6.41e-13 71.6
Msa0439770 MtrunA17_Chr4g0045041 27.136 199 120 4 350 523 10 208 2.24e-11 67.0
Msa0439770 MtrunA17_Chr4g0054341 26.804 194 134 6 48 238 5 193 2.07e-12 68.2
Msa0439770 MtrunA17_Chr7g0239501 29.075 227 151 7 44 267 15 234 3.99e-12 67.0
Msa0439770 MtrunA17_Chr7g0244061 28.634 227 132 9 347 548 32 253 8.96e-12 66.6
Msa0439770 MtrunA17_Chr7g0244061 27.368 190 129 4 42 226 26 211 2.18e-11 65.5
Msa0439770 MtrunA17_Chr6g0459351 28.283 198 128 6 45 234 13 204 9.91e-12 65.9
Msa0439770 MtrunA17_Chr7g0270451 32.653 196 111 6 342 520 4 195 1.79e-11 65.1
Msa0439770 MtrunA17_Chr7g0268591 30.693 202 115 8 336 517 22 218 3.83e-11 64.7
Msa0439770 MtrunA17_Chr7g0247011 31.724 145 87 3 52 184 11 155 4.41e-11 64.3
Msa0439770 MtrunA17_Chr4g0074511 26.425 193 129 6 47 229 42 231 4.43e-11 64.3
Msa0439770 MtrunA17_Chr6g0459301 28.283 198 128 6 45 234 14 205 4.82e-11 63.9
Msa0439770 MtrunA17_Chr7g0239451 27.232 224 153 6 47 267 18 234 5.00e-11 63.5
Msa0439770 MtrunA17_Chr4g0040371 27.411 197 131 5 42 233 16 205 5.34e-11 63.9
Msa0439770 MtrunA17_Chr7g0259531 27.604 192 133 4 48 233 14 205 7.70e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0439770 AT5G50700.1 61.538 338 128 2 1 338 1 336 8.77e-141 413
Msa0439770 AT5G50700.1 45.185 270 121 4 341 584 42 310 7.63e-73 238
Msa0439770 AT5G50600.1 61.538 338 128 2 1 338 1 336 8.77e-141 413
Msa0439770 AT5G50600.1 45.185 270 121 4 341 584 42 310 7.63e-73 238
Msa0439770 AT5G50770.1 50.000 336 166 2 1 336 1 334 9.41e-107 325
Msa0439770 AT5G50770.1 42.697 267 126 4 341 581 42 307 2.54e-64 215
Msa0439770 AT3G47350.1 46.965 313 152 3 1 313 1 299 3.19e-97 300
Msa0439770 AT3G47350.1 46.296 270 126 3 342 595 42 308 7.59e-69 226
Msa0439770 AT5G50590.1 49.505 303 142 2 1 303 1 292 8.15e-95 293
Msa0439770 AT5G50590.1 46.875 256 113 4 340 576 41 292 2.54e-67 221
Msa0439770 AT5G50690.1 49.505 303 142 2 1 303 1 292 8.15e-95 293
Msa0439770 AT5G50690.1 46.875 256 113 4 340 576 41 292 2.54e-67 221
Msa0439770 AT3G47360.1 46.645 313 154 2 1 313 1 300 3.86e-92 286
Msa0439770 AT3G47360.1 45.926 270 127 5 342 595 43 309 8.51e-66 218
Msa0439770 AT4G10020.1 45.912 318 165 4 1 316 2 314 9.15e-88 278
Msa0439770 AT4G10020.1 42.322 267 130 5 336 579 39 304 5.79e-58 199
Msa0439770 AT3G47350.2 49.470 283 127 4 1 283 1 267 6.95e-87 273
Msa0439770 AT3G47350.2 47.085 223 99 3 342 548 42 261 6.06e-55 189
Msa0439770 AT5G50590.2 53.975 239 110 0 1 239 1 239 3.61e-81 256
Msa0439770 AT5G50590.2 51.042 192 79 2 340 517 41 231 7.72e-55 187
Msa0439770 AT5G50690.2 53.975 239 110 0 1 239 1 239 3.61e-81 256
Msa0439770 AT5G50690.2 51.042 192 79 2 340 517 41 231 7.72e-55 187
Msa0439770 AT3G47350.3 38.978 313 133 4 1 313 1 255 1.35e-68 224
Msa0439770 AT3G47350.3 39.259 270 101 4 342 595 42 264 2.44e-45 162
Msa0439770 AT3G03330.1 35.088 228 135 7 17 231 6 233 5.42e-24 103
Msa0439770 AT3G03330.1 32.857 210 116 6 330 517 27 233 2.97e-14 74.7
Msa0439770 AT5G65205.1 34.211 190 111 7 49 233 10 190 2.46e-21 95.1
Msa0439770 AT5G65205.1 29.648 199 127 5 348 535 10 206 1.02e-12 69.3
Msa0439770 AT5G10050.1 31.606 193 122 5 49 238 9 194 3.14e-21 94.7
Msa0439770 AT5G10050.1 30.808 198 121 6 348 534 9 201 1.86e-16 80.5
Msa0439770 AT1G63380.2 28.934 197 132 5 48 236 25 221 1.72e-16 80.9
Msa0439770 AT1G54870.1 29.146 199 130 5 40 229 76 272 1.90e-16 81.6
Msa0439770 AT1G54870.2 29.648 199 129 6 40 229 78 274 1.93e-16 81.6
Msa0439770 AT3G05260.1 29.648 199 126 7 39 227 30 224 2.03e-16 80.5
Msa0439770 AT1G24360.1 28.718 195 134 5 43 234 72 264 2.46e-16 80.9
Msa0439770 AT1G24360.1 30.622 209 121 8 348 536 78 282 4.22e-12 68.2
Msa0439770 AT1G63380.3 28.934 197 132 5 48 236 18 214 2.52e-16 80.1
Msa0439770 AT1G63380.4 28.934 197 132 5 48 236 22 218 3.19e-16 80.1
Msa0439770 AT1G63380.1 28.934 197 132 5 48 236 20 216 3.50e-16 79.7
Msa0439770 AT3G12800.1 30.594 219 129 6 40 243 5 215 4.76e-16 79.7
Msa0439770 AT1G49670.2 33.673 196 105 5 350 520 10 205 1.12e-15 80.9
Msa0439770 AT1G49670.2 24.490 196 136 3 52 235 11 206 1.83e-12 70.9
Msa0439770 AT1G49670.1 33.673 196 105 5 350 520 10 205 1.18e-15 80.9
Msa0439770 AT1G49670.1 24.490 196 136 3 52 235 11 206 1.91e-12 70.9
Msa0439770 AT1G62610.2 28.934 197 132 5 48 236 16 212 2.28e-15 77.4
Msa0439770 AT1G62610.1 28.934 197 132 5 48 236 17 213 2.43e-15 77.0
Msa0439770 AT1G62610.3 28.934 197 132 5 48 236 18 214 2.55e-15 77.0
Msa0439770 AT1G62610.4 28.934 197 132 5 48 236 22 218 3.71e-15 76.6
Msa0439770 AT3G55310.1 28.000 200 127 6 48 235 20 214 4.36e-14 73.6
Msa0439770 AT4G05530.1 26.154 195 130 5 41 229 5 191 9.30e-14 72.0
Msa0439770 AT2G17845.1 27.500 200 133 6 48 236 50 248 1.76e-13 72.0
Msa0439770 AT3G55290.1 28.061 196 134 5 48 236 21 216 3.34e-13 70.9
Msa0439770 AT3G55290.2 28.061 196 134 5 48 236 20 215 3.69e-13 70.9
Msa0439770 AT5G06060.1 27.948 229 147 8 44 267 8 223 4.24e-13 70.5
Msa0439770 AT3G46170.1 27.041 196 136 5 48 236 29 224 2.31e-12 68.6
Msa0439770 AT4G13180.1 25.764 229 149 6 45 255 13 238 4.40e-12 67.4
Msa0439770 AT2G29290.2 30.493 223 133 9 52 267 14 221 5.69e-12 67.0
Msa0439770 AT5G18210.1 26.180 233 148 7 44 255 7 236 8.30e-12 66.2
Msa0439770 AT3G06060.1 31.034 203 114 7 52 238 44 236 9.26e-12 67.0
Msa0439770 AT3G06060.2 31.034 203 114 7 52 238 61 253 1.01e-11 67.0
Msa0439770 AT1G67730.1 25.746 268 173 13 16 261 12 275 1.21e-11 66.6
Msa0439770 AT3G04000.1 27.670 206 135 5 42 233 11 216 1.36e-11 65.9
Msa0439770 AT5G18210.2 26.087 230 152 6 44 255 7 236 1.44e-11 65.9
Msa0439770 AT3G26770.1 28.426 197 131 6 43 234 39 230 2.46e-11 65.5
Msa0439770 AT2G29370.1 28.384 229 146 7 44 267 15 230 2.83e-11 65.1
Msa0439770 AT4G24050.2 29.302 215 118 8 52 237 39 248 4.12e-11 64.7
Msa0439770 AT5G19200.1 29.949 197 121 6 50 235 40 230 7.31e-11 64.3
Msa0439770 AT4G24050.1 29.302 215 118 8 52 237 39 248 7.63e-11 64.3
Msa0439770 AT3G03980.1 26.829 205 137 5 42 233 11 215 8.21e-11 63.5

Find 167 sgRNAs with CRISPR-Local

Find 841 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCAACAAACGGTTCTAATT+TGG 0.141257 3_3:+6139973 Msa0439770:three_prime_UTR
CAAGAAAACACATTTCATTT+AGG 0.152230 3_3:+6139944 Msa0439770:three_prime_UTR
GTAAATAATGCTGGAATTAT+TGG 0.187644 3_3:+6138727 Msa0439770:CDS
TCCCCTGATGTTATCATTAT+TGG 0.195093 3_3:+6138545 Msa0439770:CDS
TACATTATATATACTCCTTC+TGG 0.214734 3_3:-6128676 None:intergenic
GCTATGGAGCATATTATAAA+AGG 0.238850 3_3:+6140409 Msa0439770:three_prime_UTR
TTGCTAGGTGCTTCTCTTGC+TGG 0.240546 3_3:-6129278 None:intergenic
GTCTAAATACACACAAATTA+TGG 0.246179 3_3:+6138783 Msa0439770:CDS
GTCACTTGTTGACATTAAAA+TGG 0.249790 3_3:+6138481 Msa0439770:CDS
TAAATAATGCTGGAATTATT+GGG 0.259768 3_3:+6138728 Msa0439770:CDS
CTAATCACTGGAGCAGCTTC+TGG 0.259839 3_3:+6138050 Msa0439770:CDS
TCCTTTCATCAATTGATTCT+TGG 0.265350 3_3:+6128643 Msa0439770:CDS
AAGAAAACACATTTCATTTA+GGG 0.271925 3_3:+6139945 Msa0439770:three_prime_UTR
GATGAAACCGTTAACCATTT+TGG 0.281093 3_3:+6128270 Msa0439770:CDS
ATTGAACTTGGTTGGTCTAT+TGG 0.282291 3_3:+6139591 Msa0439770:CDS
GCTGATAGAGCTCGTGATTT+TGG 0.286452 3_3:+6128183 Msa0439770:CDS
TTTCTCAGGAAACAAACTTC+TGG 0.287027 3_3:+6139271 Msa0439770:intron
TCAAAACAGACCTGGCATTC+AGG 0.295225 3_3:+6139640 Msa0439770:CDS
AAACCCCACTCCAACAATTC+TGG 0.298326 3_3:-6129221 None:intergenic
TGGACCCAACGACACATCTT+TGG 0.322629 3_3:+6139828 Msa0439770:CDS
TTTCTAAAGTTGATGATTGT+AGG 0.326151 3_3:+6128238 Msa0439770:CDS
TTTGGTAGGACACAAACTTT+TGG 0.338368 3_3:+6128556 Msa0439770:intron
CAATAAGACAGTGTGATAAA+AGG 0.349024 3_3:-6140029 None:intergenic
AGGGAAGAATGTAAAGATAA+TGG 0.356930 3_3:-6127946 None:intergenic
CATACATACGTCTACCAAAA+TGG 0.358019 3_3:-6128284 None:intergenic
ACTGGAGCAGCTTCTGGAAT+TGG 0.358733 3_3:+6138056 Msa0439770:CDS
AAGAATTTGAAGGTCCAATA+TGG 0.365021 3_3:-6127918 None:intergenic
TTCTCAGGAAACAAACTTCT+GGG 0.368129 3_3:+6139272 Msa0439770:intron
ATTGCCACCAGAAGGCAAAA+TGG 0.369505 3_3:+6128940 Msa0439770:CDS
TCTAGTAGCAGTGGCTGATA+TGG 0.371464 3_3:+6138508 Msa0439770:CDS
GGACCCAACGACACATCTTT+GGG 0.376556 3_3:+6139829 Msa0439770:CDS
GTTGGTGCGAACAGAAAATA+TGG 0.382305 3_3:+6138013 Msa0439770:CDS
TTGTTACATCTCTCATATCT+TGG 0.383129 3_3:-6128970 None:intergenic
TTCTTCCCTGAAAATGTTGC+TGG 0.384509 3_3:+6127960 Msa0439770:CDS
CATTGAAGATGAGGCTACTC+TGG 0.388998 3_3:+6139665 Msa0439770:CDS
CAAGAGTTACCAAGAGCTTA+AGG 0.391355 3_3:+6139896 Msa0439770:CDS
GTTTCATGCAGTGGATCATC+TGG 0.391549 3_3:+6138705 Msa0439770:intron
TTTATTCTACCTTAAGCTCT+TGG 0.393929 3_3:-6139905 None:intergenic
CTTAAGCTCTTGGTAACTCT+TGG 0.396197 3_3:-6139895 None:intergenic
ATGCATTACAGTGGATCATT+TGG 0.398219 3_3:+6128381 Msa0439770:intron
TAAGCAGATTATCATTCTTC+CGG 0.400439 3_3:-6139869 None:intergenic
GGTTCAGGAACTTATGAATA+AGG 0.407519 3_3:-6127848 None:intergenic
TAGATACTGAGTCTCGGAAT+TGG 0.408361 3_3:-6139384 None:intergenic
CACATCACTGGTGCTTCCTC+TGG 0.411745 3_3:+6127993 Msa0439770:CDS
TGTATGTGACAAACCCTTCA+TGG 0.413786 3_3:+6139757 Msa0439770:CDS
ACTGGTGCTTCCTCTGGTAT+TGG 0.420526 3_3:+6127999 Msa0439770:CDS
TGCACCTTTCACTATGTCCT+TGG 0.421028 3_3:-6139721 None:intergenic
TGGCAATAAGACTTTGCCTT+TGG 0.423226 3_3:-6128924 None:intergenic
AGTTGATGATTGTAGGCGTT+TGG 0.425267 3_3:+6128245 Msa0439770:CDS
GCACCAATAATGATAACATC+AGG 0.433269 3_3:-6138548 None:intergenic
CGTTTAAGATATATTAAAGA+AGG 0.434088 3_3:-6140293 None:intergenic
GCTGATATGGCAAGGTCTCT+TGG 0.434769 3_3:+6138521 Msa0439770:CDS
CCATAGCTGCCTTGCAAATG+AGG 0.434832 3_3:-6140393 None:intergenic
TTTATCCCCACCTGGTGGAC+TGG 0.435024 3_3:+6139808 Msa0439770:CDS
ACATTATATATACTCCTTCT+GGG 0.435152 3_3:-6128675 None:intergenic
AATATTACTTTGACCCATGA+AGG 0.435612 3_3:-6139771 None:intergenic
CCTCATTTGCAAGGCAGCTA+TGG 0.435684 3_3:+6140393 Msa0439770:three_prime_UTR
ACGTCTACCAAAATGGTTAA+CGG 0.443115 3_3:-6128277 None:intergenic
TCCAATATGGTGGTAAGAAA+AGG 0.443917 3_3:-6127905 None:intergenic
GAAAAGGAGTAAGGAAAAGA+AGG 0.450873 3_3:-6127889 None:intergenic
AAAGGTACATGCTAATTAAA+CGG 0.451226 3_3:-6140011 None:intergenic
AATGATATATCAGGCTAGTA+AGG 0.453299 3_3:+6139536 Msa0439770:intron
TCCAAATTAGAACCGTTTGT+TGG 0.453568 3_3:-6139974 None:intergenic
CAAAACAGACCTGGCATTCA+GGG 0.453872 3_3:+6139641 Msa0439770:CDS
AGTAAGGAAAAGAAGGTGAA+TGG 0.457421 3_3:-6127882 None:intergenic
CTTCAATGACCCTGAATGCC+AGG 0.457896 3_3:-6139650 None:intergenic
AGATTATCATTCTTCCGGTA+AGG 0.458492 3_3:-6139864 None:intergenic
GATCATCTGGTAAATAATGC+TGG 0.468710 3_3:+6138718 Msa0439770:CDS
GCGCTTACTGTCTTCAACCT+TGG 0.472912 3_3:-6138579 None:intergenic
AGAAAAGTTGTACTAATCAC+TGG 0.477822 3_3:+6138038 Msa0439770:CDS
ATGGAGGAGCTACTAGGTTC+AGG 0.479762 3_3:-6127863 None:intergenic
CTTTAAGAATTGAACTTGGT+TGG 0.480366 3_3:+6139583 Msa0439770:CDS
TACTCTGGGAAGACTTCCAT+TGG 0.485275 3_3:+6139680 Msa0439770:CDS
TGAGGTGTGGTAAAGCAAAA+CGG 0.485877 3_3:-6128596 None:intergenic
GTGTCCAGAATTGTTGGAGT+GGG 0.486451 3_3:+6129217 Msa0439770:CDS
TTGCCACCAGAAGGCAAAAT+GGG 0.488945 3_3:+6128941 Msa0439770:CDS
GGCATAACAATTGCCACACC+TGG 0.489859 3_3:+6139612 Msa0439770:CDS
TGGGGTTCCAAGGTTGGTAG+AGG 0.491125 3_3:+6138747 Msa0439770:CDS
TATATACTCCTTCTGGGTGC+AGG 0.491452 3_3:-6128669 None:intergenic
ACATAGTGAAAGGTGCATGC+AGG 0.491624 3_3:+6139727 Msa0439770:CDS
GAGCTCTATCAGCAACTTCA+CGG 0.495626 3_3:-6128173 None:intergenic
GATTATCATTCTTCCGGTAA+GGG 0.496088 3_3:-6139863 None:intergenic
AAGTCTTTATGAAACATTGA+GGG 0.498519 3_3:+6128838 Msa0439770:CDS
TGGTGGTAAGAAAAGGAGTA+AGG 0.505040 3_3:-6127898 None:intergenic
TGTGGTGAAAAGAGGAGGAT+TGG 0.506284 3_3:-6140238 None:intergenic
CCTCTGCTGTTTCTGAGGTG+TGG 0.510515 3_3:-6128609 None:intergenic
CTGGAATTATTGGGGTTCCA+AGG 0.514905 3_3:+6138737 Msa0439770:CDS
GCACGCATTATAATAACATC+AGG 0.515853 3_3:-6128210 None:intergenic
GTTTAAGATATATTAAAGAA+GGG 0.516057 3_3:-6140292 None:intergenic
TAGCTTTAAATTACCATGAG+AGG 0.516356 3_3:-6128469 None:intergenic
GAAACATTGAGGGTTGAAGT+TGG 0.516747 3_3:+6128848 Msa0439770:CDS
ACTCTGGGAAGACTTCCATT+GGG 0.519855 3_3:+6139681 Msa0439770:CDS
ATGGTACATTGAGGGGAGAT+AGG 0.520717 3_3:+6129144 Msa0439770:CDS
GAGGTGTGGTAAAGCAAAAC+GGG 0.520958 3_3:-6128595 None:intergenic
TACCATGAGAGGTCTCCAAT+TGG 0.521548 3_3:-6128458 None:intergenic
AGTGTTGTGTCCAGAATTGT+TGG 0.521927 3_3:+6129211 Msa0439770:CDS
AGGTGAATGGAGGAGCTACT+AGG 0.526268 3_3:-6127869 None:intergenic
AATCCCAAAGATGTGTCGTT+GGG 0.526397 3_3:-6139832 None:intergenic
CATAGTGAAAGGTGCATGCA+GGG 0.526660 3_3:+6139728 Msa0439770:CDS
AATGGAAAGGAAGAATTTGA+AGG 0.527999 3_3:-6127928 None:intergenic
ATAGTCGTTGCTTCAGCTTG+TGG 0.530720 3_3:+6139354 Msa0439770:CDS
TCGTTGCTTCAGCTTGTGGA+TGG 0.531934 3_3:+6139358 Msa0439770:CDS
GTCGTTGGGTCCAGTCCACC+AGG 0.532099 3_3:-6139818 None:intergenic
AATAGTGAATGGTACATTGA+GGG 0.532567 3_3:+6129136 Msa0439770:CDS
ACCAGAAGGCAAAATGGGCG+TGG 0.534597 3_3:+6128946 Msa0439770:CDS
CTATGGAGCATATTATAAAA+GGG 0.535593 3_3:+6140410 Msa0439770:three_prime_UTR
TTAGGGACTTAGCCAACAAA+CGG 0.537764 3_3:+6139962 Msa0439770:three_prime_UTR
TTGGGTCCAGTCCACCAGGT+GGG 0.538985 3_3:-6139814 None:intergenic
GGTGAAAAGAGGAGGATTGG+TGG 0.540680 3_3:-6140235 None:intergenic
GAGACTTTAAGAATTGAACT+TGG 0.549331 3_3:+6139579 Msa0439770:CDS
AAATCCCAAAGATGTGTCGT+TGG 0.552388 3_3:-6139833 None:intergenic
GGTAAAGTTGTTCACATCAC+TGG 0.554581 3_3:+6127981 Msa0439770:CDS
AATTCAGATTCTATGTAACC+TGG 0.554617 3_3:-6128899 None:intergenic
AATTATTGGGGTTCCAAGGT+TGG 0.558074 3_3:+6138741 Msa0439770:CDS
ATGTAACTGATATCACCAAT+TGG 0.561569 3_3:+6128443 Msa0439770:CDS
TAAGTCTTTATGAAACATTG+AGG 0.565380 3_3:+6128837 Msa0439770:CDS
CACCAATTGGAGACCTCTCA+TGG 0.567087 3_3:+6128456 Msa0439770:CDS
AAATAATGCTGGAATTATTG+GGG 0.573354 3_3:+6138729 Msa0439770:CDS
TCCAAGAATCAATTGATGAA+AGG 0.573578 3_3:-6128644 None:intergenic
CAATAGTGAATGGTACATTG+AGG 0.574939 3_3:+6129135 Msa0439770:CDS
CATTCACTCACTGATCCCAC+TGG 0.576814 3_3:-6129104 None:intergenic
GAAGGTGCTTTATCCCCACC+TGG 0.576932 3_3:+6139800 Msa0439770:CDS
GTATGTGACAAACCCTTCAT+GGG 0.577043 3_3:+6139758 Msa0439770:CDS
CACCAATAATGATAACATCA+GGG 0.577672 3_3:-6138547 None:intergenic
AGTTACATCTTCAAACATCA+TGG 0.578048 3_3:-6128428 None:intergenic
ATATTACTTTGACCCATGAA+GGG 0.580640 3_3:-6139770 None:intergenic
AACTTCTGGGGAGCAGCTCG+TGG 0.582009 3_3:+6139285 Msa0439770:CDS
CTTGGATGCCTGCACCCAGA+AGG 0.586038 3_3:+6128661 Msa0439770:CDS
TATGTCATTCTAAACCATGC+TGG 0.590361 3_3:-6129179 None:intergenic
TGTGCAAAATCAATAGTGAA+TGG 0.591847 3_3:+6129125 Msa0439770:CDS
ATTGAAGATGAGGCTACTCT+GGG 0.592222 3_3:+6139666 Msa0439770:CDS
TGCTTCCTCTGGTATTGGAG+AGG 0.597134 3_3:+6128004 Msa0439770:CDS
TGAAGTGAGTGCAACTCCAG+TGG 0.598795 3_3:+6129088 Msa0439770:CDS
GGTATTTGACTGCACCAGCA+TGG 0.600958 3_3:+6129165 Msa0439770:CDS
ACGTTATAGATACTGAGTCT+CGG 0.601954 3_3:-6139390 None:intergenic
ATTCAGGGTCATTGAAGATG+AGG 0.603172 3_3:+6139656 Msa0439770:CDS
TGTCCAGAATTGTTGGAGTG+GGG 0.604050 3_3:+6129218 Msa0439770:CDS
AAGGAAAAGAAGGTGAATGG+AGG 0.605287 3_3:-6127879 None:intergenic
AATGGAGAATCTAGTAGCAG+TGG 0.606093 3_3:+6138499 Msa0439770:CDS
TCTCAGGAAACAAACTTCTG+GGG 0.608091 3_3:+6139273 Msa0439770:intron
AAAGTCTTATTGCCACCAGA+AGG 0.611122 3_3:+6128932 Msa0439770:CDS
TGGGTCCAGTCCACCAGGTG+GGG 0.616076 3_3:-6139813 None:intergenic
GAAGTGAGTGCAACTCCAGT+GGG 0.616438 3_3:+6129089 Msa0439770:CDS
TTCATCAGTTGAATGTGCCA+AGG 0.618817 3_3:+6139704 Msa0439770:CDS
AGCAGCTTCTGGAATTGGCG+AGG 0.622046 3_3:+6138061 Msa0439770:CDS
TGTGTCCAGAATTGTTGGAG+TGG 0.626150 3_3:+6129216 Msa0439770:CDS
AAACAGCAGAGGCAAAATTG+TGG 0.631748 3_3:+6128620 Msa0439770:CDS
ATAGAATCTGAATTAACCAA+AGG 0.631775 3_3:+6128908 Msa0439770:CDS
GGTGCTTTATCCCCACCTGG+TGG 0.631992 3_3:+6139803 Msa0439770:CDS
TAGCAGTGGCTGATATGGCA+AGG 0.633184 3_3:+6138513 Msa0439770:CDS
ATAGTGAATGGTACATTGAG+GGG 0.634116 3_3:+6129137 Msa0439770:CDS
GGTGTAACAATTGTTACACC+AGG 0.641548 3_3:+6128881 Msa0439770:CDS
CATTCAACTGATGAACCCAA+TGG 0.642419 3_3:-6139696 None:intergenic
AGAATGTAAAGATAATGGAA+AGG 0.645582 3_3:-6127941 None:intergenic
GTTGGGTCCAGTCCACCAGG+TGG 0.645605 3_3:-6139815 None:intergenic
ATAGTAGTACCTCATTTGCA+AGG 0.648988 3_3:+6140384 Msa0439770:three_prime_UTR
GCTTACGAGTATGCTAAGAG+AGG 0.664397 3_3:+6128111 Msa0439770:CDS
AATTTGAAGGTCCAATATGG+TGG 0.665878 3_3:-6127915 None:intergenic
TGGAGCATATTATAAAAGGG+AGG 0.669784 3_3:+6140413 Msa0439770:three_prime_UTR
GTTGAAGTTGGAGCAGACGT+AGG 0.674435 3_3:+6128860 Msa0439770:CDS
ACCAATAATGATAACATCAG+GGG 0.676766 3_3:-6138546 None:intergenic
ATAGTGAAAGGTGCATGCAG+GGG 0.678255 3_3:+6139729 Msa0439770:CDS
AGTATGCTAGACGAGGAGCA+AGG 0.694009 3_3:+6138456 Msa0439770:CDS
CCACACCTCAGAAACAGCAG+AGG 0.715008 3_3:+6128609 Msa0439770:CDS
TGTGCCAAGGACATAGTGAA+AGG 0.715969 3_3:+6139717 Msa0439770:CDS
GCTTATGAGTATGCTAGACG+AGG 0.721771 3_3:+6138449 Msa0439770:CDS
TATTGGTGCAGATGTGACCA+AGG 0.724737 3_3:+6138562 Msa0439770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATTATTTAAAAA+AGG + chr3_3:6134171-6134190 Msa0439770:intron 0.0%
!! AATAAATAAATAAAATAATA+TGG + chr3_3:6136214-6136233 Msa0439770:intron 0.0%
!! GATTAATTAATATTTGTTTA+AGG - chr3_3:6128325-6128344 None:intergenic 10.0%
!! ATTTCTCTAATATAAAATAT+TGG + chr3_3:6129809-6129828 Msa0439770:intron 10.0%
!! TTCTTCTAATAAAATAATAT+TGG + chr3_3:6130301-6130320 Msa0439770:intron 10.0%
!! TCTTCTAATAAAATAATATT+GGG + chr3_3:6130302-6130321 Msa0439770:intron 10.0%
!! TTGAGTAAATAAATATTATT+GGG - chr3_3:6130511-6130530 None:intergenic 10.0%
!! TTTGAGTAAATAAATATTAT+TGG - chr3_3:6130512-6130531 None:intergenic 10.0%
!!! TTTTTGTTTATAATAATGAT+AGG - chr3_3:6131030-6131049 None:intergenic 10.0%
!! TATTTATTAAATAATGTATG+AGG + chr3_3:6131077-6131096 Msa0439770:intron 10.0%
!!! AAAATTTTATAACATGTTTT+TGG + chr3_3:6131293-6131312 Msa0439770:intron 10.0%
!! TAAACATGAAATAAATTATT+GGG - chr3_3:6133579-6133598 None:intergenic 10.0%
!! ATAAACATGAAATAAATTAT+TGG - chr3_3:6133580-6133599 None:intergenic 10.0%
!! TGTTTATATGATAAAATATT+AGG - chr3_3:6133641-6133660 None:intergenic 10.0%
!! AAATCATTTATTAAAATGTA+AGG - chr3_3:6134246-6134265 None:intergenic 10.0%
!! AAAATTTGAGAATTTAATTA+TGG - chr3_3:6134713-6134732 None:intergenic 10.0%
!!! AGAAATATTTTATTTTGTTT+TGG - chr3_3:6136499-6136518 None:intergenic 10.0%
!! AATTGCTTATTTATATAAAA+AGG + chr3_3:6137991-6138010 Msa0439770:intron 10.0%
!! ATAAATAAATTAACAAAGAA+AGG - chr3_3:6138414-6138433 None:intergenic 10.0%
!! AACAAAAAAAATTATATGAT+GGG + chr3_3:6138674-6138693 Msa0439770:intron 10.0%
!!! CATTTTTTTTAAATAAAAAG+AGG + chr3_3:6140196-6140215 Msa0439770:three_prime_UTR 10.0%
!!! ATTTTAATTTTTGTAGCATT+TGG + chr3_3:6128089-6128108 Msa0439770:intron 15.0%
!! CTTTAACATTTGATATTAAT+AGG - chr3_3:6129528-6129547 None:intergenic 15.0%
!! CTAAAATTTCACTATATTTA+AGG + chr3_3:6129957-6129976 Msa0439770:intron 15.0%
!!! TTTAATTTTCATAAATTTGC+CGG - chr3_3:6130650-6130669 None:intergenic 15.0%
!!! TTTATGAAAATTAAAGTGTT+TGG + chr3_3:6130655-6130674 Msa0439770:intron 15.0%
!!! TTCAAAATTTTATTTTACCA+GGG - chr3_3:6131320-6131339 None:intergenic 15.0%
!!! TTTCAAAATTTTATTTTACC+AGG - chr3_3:6131321-6131340 None:intergenic 15.0%
!!! TTTCAAAATTTTAATTTACC+AGG + chr3_3:6131517-6131536 Msa0439770:intron 15.0%
!!! TTCAAAATTTTAATTTACCA+GGG + chr3_3:6131518-6131537 Msa0439770:intron 15.0%
!!! TTCAAAATTTTATTTTACCA+GGG - chr3_3:6131320-6131339 None:intergenic 15.0%
!!! TTTCAAAATTTTATTTTACC+AGG - chr3_3:6131321-6131340 None:intergenic 15.0%
!! AATTAAGAAAACAATAAAAC+TGG - chr3_3:6132606-6132625 None:intergenic 15.0%
!! TATTTATTAAATGATGTATG+AGG - chr3_3:6133126-6133145 None:intergenic 15.0%
!!! TTTTTGCTTATAATAATGAT+AGG + chr3_3:6133173-6133192 Msa0439770:intron 15.0%
!! AAAAGGATTAAATATGTTAT+TGG + chr3_3:6134188-6134207 Msa0439770:intron 15.0%
!!! AATTTTTTTTGTTGTTGATA+CGG + chr3_3:6134352-6134371 Msa0439770:intron 15.0%
!! AAAAAAATCACCAATAAAAT+GGG - chr3_3:6134435-6134454 None:intergenic 15.0%
!! AAAAAAAATCACCAATAAAA+TGG - chr3_3:6134436-6134455 None:intergenic 15.0%
!! ATTCAAAGGAAAAAAAAAAA+AGG - chr3_3:6134864-6134883 None:intergenic 15.0%
!! AAAACATTTATTGAAATGTA+AGG + chr3_3:6135533-6135552 Msa0439770:intron 15.0%
!!! CTTTCAGATTTTTTTTTTAA+GGG - chr3_3:6135607-6135626 None:intergenic 15.0%
!!! ACTTTCAGATTTTTTTTTTA+AGG - chr3_3:6135608-6135627 None:intergenic 15.0%
!! TTTCTGTAAAATATAAAACA+CGG + chr3_3:6135976-6135995 Msa0439770:intron 15.0%
!!! AATATTTTATTTTGTTTTGG+AGG - chr3_3:6136496-6136515 None:intergenic 15.0%
!! ATATTTATTATAAATAGGAC+TGG + chr3_3:6137429-6137448 Msa0439770:intron 15.0%
!! TATGAAAAATCTAATTGATA+TGG + chr3_3:6138214-6138233 Msa0439770:intron 15.0%
!!! TGTACTATAAAGTTTTTTAT+TGG - chr3_3:6138263-6138282 None:intergenic 15.0%
!! GAACAAAAAAAATTATATGA+TGG + chr3_3:6138673-6138692 Msa0439770:intron 15.0%
!! TTATTAACAAATAACAATGT+TGG + chr3_3:6138887-6138906 Msa0439770:intron 15.0%
!!! TGGAACTTTATTTAAAATTA+TGG + chr3_3:6139060-6139079 Msa0439770:intron 15.0%
!!! TACATTTTTTTTTAAGTTCA+AGG + chr3_3:6140099-6140118 Msa0439770:three_prime_UTR 15.0%
!!! ACATTTTTTTTTAAGTTCAA+GGG + chr3_3:6140100-6140119 Msa0439770:three_prime_UTR 15.0%
!!! TAAAATCAATAGTTTTTTTG+GGG - chr3_3:6140139-6140158 None:intergenic 15.0%
!!! CTAAAATCAATAGTTTTTTT+GGG - chr3_3:6140140-6140159 None:intergenic 15.0%
!!! ACTAAAATCAATAGTTTTTT+TGG - chr3_3:6140141-6140160 None:intergenic 15.0%
!!! GTTTAAGATATATTAAAGAA+GGG - chr3_3:6140295-6140314 None:intergenic 15.0%
!!! TAATTATTTGCTGTGTATTT+TGG + chr3_3:6128538-6128557 Msa0439770:intron 20.0%
!!! TTTAATTTACCTAGTAATAC+AGG + chr3_3:6129010-6129029 Msa0439770:intron 20.0%
!! TGTTATGATGATATATATGT+AGG + chr3_3:6129064-6129083 Msa0439770:intron 20.0%
!! TAGAGAGAAAAAAAAAACAA+AGG - chr3_3:6129587-6129606 None:intergenic 20.0%
!! ACTCTTACTCTTTATATTAT+AGG - chr3_3:6129616-6129635 None:intergenic 20.0%
!!! TATTTTTGACAGAAATATGT+TGG + chr3_3:6129840-6129859 Msa0439770:intron 20.0%
!!! CTTCATTTCTTTTTGAAAAA+TGG - chr3_3:6130062-6130081 None:intergenic 20.0%
!!! TAATGACTTTAATTTGAAGT+AGG + chr3_3:6130125-6130144 Msa0439770:intron 20.0%
!! TAAAAAAATAGGCTTATGAA+AGG + chr3_3:6130174-6130193 Msa0439770:intron 20.0%
!!! AAAGTTTTTAAAACCCAAAA+AGG + chr3_3:6130572-6130591 Msa0439770:intron 20.0%
!!! AGTCATTTTTGAATTTGTAA+CGG + chr3_3:6130705-6130724 Msa0439770:intron 20.0%
!!! ATTTTGCTTATAATAGTGAA+AGG - chr3_3:6131278-6131297 None:intergenic 20.0%
!! TAAAAAATTATAGCGAGTTT+GGG - chr3_3:6131551-6131570 None:intergenic 20.0%
!!! TTTAGGTTAAAACATGTTTT+TGG + chr3_3:6131567-6131586 Msa0439770:intron 20.0%
!!! TGTAAATTTTATTCTCATCT+TGG - chr3_3:6132450-6132469 None:intergenic 20.0%
!! AGTAATATTCATTATTCTTG+CGG - chr3_3:6133414-6133433 None:intergenic 20.0%
!! AATAAATTATTGGGAAGTAA+AGG - chr3_3:6133570-6133589 None:intergenic 20.0%
!!! GTAGCGTAAAATAATTATTT+TGG - chr3_3:6134049-6134068 None:intergenic 20.0%
!!! ATTTTTTTTGTTGTTGATAC+GGG + chr3_3:6134353-6134372 Msa0439770:intron 20.0%
!!! TTTTTTATCAGCCAATATAT+TGG + chr3_3:6134456-6134475 Msa0439770:intron 20.0%
!! AATCTTATCATATAACGTTA+TGG - chr3_3:6134659-6134678 None:intergenic 20.0%
!!! AACGTTATATGATAAGATTT+TGG + chr3_3:6134660-6134679 Msa0439770:intron 20.0%
!! GAAAAAAAAAAAAGGAAAAG+TGG - chr3_3:6134856-6134875 None:intergenic 20.0%
!! AAATTTCAAAAGAAATAAGC+TGG - chr3_3:6134919-6134938 None:intergenic 20.0%
!! ATTTACATTCATTTAATGTG+TGG + chr3_3:6135237-6135256 Msa0439770:intron 20.0%
!! TTTACATTCATTTAATGTGT+GGG + chr3_3:6135238-6135257 Msa0439770:intron 20.0%
!! ATTTACATTCATTTAATGTG+TGG + chr3_3:6135237-6135256 Msa0439770:intron 20.0%
!! TTTACATTCATTTAATGTGT+GGG + chr3_3:6135238-6135257 Msa0439770:intron 20.0%
!! ATGTAAGGACTATTTATTAA+AGG + chr3_3:6135548-6135567 Msa0439770:intron 20.0%
!!! CGTGTTTTATTCAAATATAA+TGG + chr3_3:6135635-6135654 Msa0439770:intron 20.0%
!!! TAAAATAATATGGATTAGAC+CGG + chr3_3:6136224-6136243 Msa0439770:intron 20.0%
!!! TCTAATTTTAAAGTCGAAAT+AGG + chr3_3:6136516-6136535 Msa0439770:intron 20.0%
!!! ATCTCTCTTTTATTTAGTAT+TGG + chr3_3:6136701-6136720 Msa0439770:intron 20.0%
!!! TCTCTCTTTTATTTAGTATT+GGG + chr3_3:6136702-6136721 Msa0439770:intron 20.0%
!! TGTAAAACGACATATAATTT+AGG - chr3_3:6137072-6137091 None:intergenic 20.0%
!! AAATAACACTAATGTTTCAT+TGG - chr3_3:6137098-6137117 None:intergenic 20.0%
!! CATTGCATAAATAATGTATT+TGG - chr3_3:6137394-6137413 None:intergenic 20.0%
!! ATCATGTGTAAAATGATTAT+AGG - chr3_3:6137623-6137642 None:intergenic 20.0%
!!! TTTTTGCTTATATTAGTAAC+CGG - chr3_3:6137664-6137683 None:intergenic 20.0%
!!! GTGATTTCATTTTTCATTTT+TGG + chr3_3:6137853-6137872 Msa0439770:intron 20.0%
!! GCTTATTTATATAAAAAGGT+TGG + chr3_3:6137995-6138014 Msa0439770:intron 20.0%
!!! TTTGCTCTATTATTTTGTTT+TGG + chr3_3:6138093-6138112 Msa0439770:intron 20.0%
!!! TTTGAGTTAATTTTGACTTA+TGG - chr3_3:6138166-6138185 None:intergenic 20.0%
!! TAAATAATGCTGGAATTATT+GGG + chr3_3:6138728-6138747 Msa0439770:CDS 20.0%
!! GAGTATAATTTACATATACA+TGG + chr3_3:6139005-6139024 Msa0439770:intron 20.0%
!! ATGTTGTAAAGAAACAAAAA+CGG + chr3_3:6139160-6139179 Msa0439770:intron 20.0%
!!! ATAATAATAATTAAGAGCAC+CGG - chr3_3:6139195-6139214 None:intergenic 20.0%
!! GCTCTTAATTATTATTATCA+TGG + chr3_3:6139197-6139216 Msa0439770:intron 20.0%
!!! CTTTACTATTTTTAAGATGT+TGG - chr3_3:6139326-6139345 None:intergenic 20.0%
!! CAACATCTTAAAAATAGTAA+AGG + chr3_3:6139324-6139343 Msa0439770:CDS 20.0%
!!! CAAAGTAATATTTTATTGGA+AGG + chr3_3:6139782-6139801 Msa0439770:CDS 20.0%
!! AAGAAAACACATTTCATTTA+GGG + chr3_3:6139945-6139964 Msa0439770:three_prime_UTR 20.0%
!!! CATTTTTTTTTAAGTTCAAG+GGG + chr3_3:6140101-6140120 Msa0439770:three_prime_UTR 20.0%
!!! CGTTTAAGATATATTAAAGA+AGG - chr3_3:6140296-6140315 None:intergenic 20.0%
!!! AGAATGTAAAGATAATGGAA+AGG - chr3_3:6127944-6127963 None:intergenic 25.0%
!!! TTTCTAAAGTTGATGATTGT+AGG + chr3_3:6128238-6128257 Msa0439770:CDS 25.0%
! ACATTATATATACTCCTTCT+GGG - chr3_3:6128678-6128697 None:intergenic 25.0%
! TACATTATATATACTCCTTC+TGG - chr3_3:6128679-6128698 None:intergenic 25.0%
! TAAGTCTTTATGAAACATTG+AGG + chr3_3:6128837-6128856 Msa0439770:CDS 25.0%
! AAGTCTTTATGAAACATTGA+GGG + chr3_3:6128838-6128857 Msa0439770:CDS 25.0%
! ATAGAATCTGAATTAACCAA+AGG + chr3_3:6128908-6128927 Msa0439770:CDS 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - chr3_3:6129681-6129700 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + chr3_3:6129680-6129699 Msa0439770:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + chr3_3:6129693-6129712 Msa0439770:intron 25.0%
!!! AACCATTTTTTGACAACTTT+TGG - chr3_3:6129778-6129797 None:intergenic 25.0%
!!! CTTCGTTTCTTTTTGAAAAA+TGG - chr3_3:6129934-6129953 None:intergenic 25.0%
! AAACCTACATAAAAATACGT+TGG + chr3_3:6130026-6130045 Msa0439770:intron 25.0%
!!! TTTCCAACGTATTTTTATGT+AGG - chr3_3:6130032-6130051 None:intergenic 25.0%
!! ACACCAACTAAATTTTATGA+AGG + chr3_3:6130392-6130411 Msa0439770:intron 25.0%
! ACACCTTCATAAAATTTAGT+TGG - chr3_3:6130398-6130417 None:intergenic 25.0%
!! ATTCATAAGATCACCTTTTT+GGG - chr3_3:6130588-6130607 None:intergenic 25.0%
!! TATTCATAAGATCACCTTTT+TGG - chr3_3:6130589-6130608 None:intergenic 25.0%
! TGAATAAACTCTCAATATTC+AGG + chr3_3:6130603-6130622 Msa0439770:intron 25.0%
!! CTCAATATTCAGGTTTATAA+CGG + chr3_3:6130613-6130632 Msa0439770:intron 25.0%
! AGTAGTTGAAAAAAAACTTG+AGG + chr3_3:6130826-6130845 Msa0439770:intron 25.0%
! GTAGTTGAAAAAAAACTTGA+GGG + chr3_3:6130827-6130846 Msa0439770:intron 25.0%
! TAGTTGAAAAAAAACTTGAG+GGG + chr3_3:6130828-6130847 Msa0439770:intron 25.0%
! CTAAAAAATTATAGCGAGTT+TGG - chr3_3:6131552-6131571 None:intergenic 25.0%
!!! CAAACTCGCTATAATTTTTT+AGG + chr3_3:6131550-6131569 Msa0439770:intron 25.0%
!! AACAAAAAATTTTGCAGAGA+TGG - chr3_3:6131345-6131364 None:intergenic 25.0%
! TAATTGAAATAAATGCCATG+TGG - chr3_3:6132699-6132718 None:intergenic 25.0%
!! TTTTTCATTCTCCAAATTCT+GGG - chr3_3:6131915-6131934 None:intergenic 25.0%
!! ATTTTTCATTCTCCAAATTC+TGG - chr3_3:6131916-6131935 None:intergenic 25.0%
!! ACATGAATTTGTTTATGGTT+TGG - chr3_3:6132061-6132080 None:intergenic 25.0%
! TAATTGAAATAAATGCCATG+TGG + chr3_3:6132699-6132718 Msa0439770:intron 25.0%
!!! TTTAGGTTAAAACTTGCTTT+TGG - chr3_3:6132894-6132913 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAG+AGG + chr3_3:6132925-6132944 Msa0439770:intron 25.0%
! AAAAATGCAACACTAGTATT+AGG + chr3_3:6133215-6133234 Msa0439770:intron 25.0%
! AAAATGCAACACTAGTATTA+GGG + chr3_3:6133216-6133235 Msa0439770:intron 25.0%
! TATTCTTGAGCTATGTAATT+GGG - chr3_3:6133451-6133470 None:intergenic 25.0%
! TTATTCTTGAGCTATGTAAT+TGG - chr3_3:6133452-6133471 None:intergenic 25.0%
! TAGAAATGAATTGAAAGAGA+TGG - chr3_3:6133532-6133551 None:intergenic 25.0%
! GGCAAAACTTATATCAAAAT+AGG - chr3_3:6133620-6133639 None:intergenic 25.0%
!! ACTTGTTACAAAGTAAACAT+AGG - chr3_3:6133678-6133697 None:intergenic 25.0%
! ATGTTTACTTTGTAACAAGT+TGG + chr3_3:6133678-6133697 Msa0439770:intron 25.0%
!!! AAACATGCATAAGTATTGAT+TGG + chr3_3:6134107-6134126 Msa0439770:intron 25.0%
! GATTTGAATCACCAATATAT+TGG - chr3_3:6134470-6134489 None:intergenic 25.0%
!!! AGGAAAATTTTGGGAATTTA+GGG - chr3_3:6134492-6134511 None:intergenic 25.0%
!!! AAGGAAAATTTTGGGAATTT+AGG - chr3_3:6134493-6134512 None:intergenic 25.0%
! AATTTCTCTTGACTAGATTA+TGG + chr3_3:6134592-6134611 Msa0439770:intron 25.0%
! ATTTCTCTTGACTAGATTAT+GGG + chr3_3:6134593-6134612 Msa0439770:intron 25.0%
!! ATTTCATTCCTTTTCATCTA+TGG + chr3_3:6134822-6134841 Msa0439770:intron 25.0%
!!! CTTTTGAAATTTCAGTACAT+AGG + chr3_3:6134927-6134946 Msa0439770:intron 25.0%
!! AAGAGAAACATAGAAGTTTT+AGG + chr3_3:6135033-6135052 Msa0439770:intron 25.0%
!!! TGATAACGGATTAAAAATGT+AGG + chr3_3:6135503-6135522 Msa0439770:intron 25.0%
!!! GATAACGGATTAAAAATGTA+GGG + chr3_3:6135504-6135523 Msa0439770:intron 25.0%
! TAAGGACTATTTATTAAAGG+AGG + chr3_3:6135551-6135570 Msa0439770:intron 25.0%
! AAGGACTATTTATTAAAGGA+GGG + chr3_3:6135552-6135571 Msa0439770:intron 25.0%
! ATTCAAATATAATGGCAACT+AGG + chr3_3:6135643-6135662 Msa0439770:intron 25.0%
! AAATATATTGTGAGAATGAG+AGG + chr3_3:6135920-6135939 Msa0439770:intron 25.0%
! GAGGTAAAAATGTCATAAAA+TGG + chr3_3:6135939-6135958 Msa0439770:intron 25.0%
! GATATTTGAACATCCTAAAA+AGG - chr3_3:6136162-6136181 None:intergenic 25.0%
!!! AAAATAATATGGATTAGACC+GGG + chr3_3:6136225-6136244 Msa0439770:intron 25.0%
!!! TTTTGTTTTGGAGGTTTTTA+TGG - chr3_3:6136487-6136506 None:intergenic 25.0%
! TTGTAGTTATTAGTTACAAG+GGG - chr3_3:6136675-6136694 None:intergenic 25.0%
! GTTGTAGTTATTAGTTACAA+GGG - chr3_3:6136676-6136695 None:intergenic 25.0%
! TGTTGTAGTTATTAGTTACA+AGG - chr3_3:6136677-6136696 None:intergenic 25.0%
!!! CTCTCTTTTATTTAGTATTG+GGG + chr3_3:6136703-6136722 Msa0439770:intron 25.0%
! GAAAGAGTAATCAATAGTTA+AGG - chr3_3:6137133-6137152 None:intergenic 25.0%
! TTCTTATAAATAAGACCGAA+TGG - chr3_3:6137317-6137336 None:intergenic 25.0%
! TTTATTATAAATAGGACTGG+AGG + chr3_3:6137432-6137451 Msa0439770:intron 25.0%
! TTATTATAAATAGGACTGGA+GGG + chr3_3:6137433-6137452 Msa0439770:intron 25.0%
! AAAATGAAACTCCCAAAAAT+TGG + chr3_3:6137466-6137485 Msa0439770:intron 25.0%
!! CAAATAACACTCATTGTTTT+GGG - chr3_3:6137894-6137913 None:intergenic 25.0%
! AGCAATTTGAAGAAAATGTA+AGG - chr3_3:6137978-6137997 None:intergenic 25.0%
! TGATACTCATGAAAAAAATG+TGG + chr3_3:6138127-6138146 Msa0439770:intron 25.0%
!!! AGAAAGGTTTTATTAGCAAA+TGG - chr3_3:6138398-6138417 None:intergenic 25.0%
! GTAAATAATGCTGGAATTAT+TGG + chr3_3:6138727-6138746 Msa0439770:CDS 25.0%
! AAATAATGCTGGAATTATTG+GGG + chr3_3:6138729-6138748 Msa0439770:CDS 25.0%
! GTCTAAATACACACAAATTA+TGG + chr3_3:6138783-6138802 Msa0439770:CDS 25.0%
! ACCTATTCTTGCAAATATTA+TGG + chr3_3:6139131-6139150 Msa0439770:intron 25.0%
! CCTATTCTTGCAAATATTAT+GGG + chr3_3:6139132-6139151 Msa0439770:intron 25.0%
! CAAAAGTGGTTTCATATTAA+AGG + chr3_3:6139229-6139248 Msa0439770:intron 25.0%
!! TTTATGTGTGTATTTTTCTC+AGG + chr3_3:6139257-6139276 Msa0439770:intron 25.0%
! ATCTTAAAAATAGTAAAGGC+AGG + chr3_3:6139328-6139347 Msa0439770:CDS 25.0%
! AATCTATATATGTGATGTTG+TGG - chr3_3:6139462-6139481 None:intergenic 25.0%
! ACACACATATATATAGATGA+TGG + chr3_3:6139492-6139511 Msa0439770:intron 25.0%
!!! GATTTGTTGAATGATATATC+AGG + chr3_3:6139527-6139546 Msa0439770:intron 25.0%
!! GGGTCAAAGTAATATTTTAT+TGG + chr3_3:6139778-6139797 Msa0439770:CDS 25.0%
!! AAATGAAATGTGTTTTCTTG+TGG - chr3_3:6139944-6139963 None:intergenic 25.0%
! CAAGAAAACACATTTCATTT+AGG + chr3_3:6139944-6139963 Msa0439770:three_prime_UTR 25.0%
!! AAAGGTACATGCTAATTAAA+CGG - chr3_3:6140014-6140033 None:intergenic 25.0%
! AAAAAAATGTAGTTTCACGT+CGG - chr3_3:6140185-6140204 None:intergenic 25.0%
! CTATGGAGCATATTATAAAA+GGG + chr3_3:6140410-6140429 Msa0439770:three_prime_UTR 25.0%
AAGAATTTGAAGGTCCAATA+TGG - chr3_3:6127921-6127940 None:intergenic 30.0%
AATGGAAAGGAAGAATTTGA+AGG - chr3_3:6127931-6127950 None:intergenic 30.0%
AGGGAAGAATGTAAAGATAA+TGG - chr3_3:6127949-6127968 None:intergenic 30.0%
AGTTACATCTTCAAACATCA+TGG - chr3_3:6128431-6128450 None:intergenic 30.0%
ATGTAACTGATATCACCAAT+TGG + chr3_3:6128443-6128462 Msa0439770:CDS 30.0%
!! TAGCTTTAAATTACCATGAG+AGG - chr3_3:6128472-6128491 None:intergenic 30.0%
ATTCCCAATTCAACTCAATA+AGG - chr3_3:6128514-6128533 None:intergenic 30.0%
!! TATTGAGTTGAATTGGGAAT+TGG + chr3_3:6128514-6128533 Msa0439770:intron 30.0%
!!! TATTTGCTGTGTATTTTGGT+AGG + chr3_3:6128542-6128561 Msa0439770:intron 30.0%
! TCCTTTCATCAATTGATTCT+TGG + chr3_3:6128643-6128662 Msa0439770:CDS 30.0%
TCCAAGAATCAATTGATGAA+AGG - chr3_3:6128647-6128666 None:intergenic 30.0%
AATTCAGATTCTATGTAACC+TGG - chr3_3:6128902-6128921 None:intergenic 30.0%
TTGTTACATCTCTCATATCT+TGG - chr3_3:6128973-6128992 None:intergenic 30.0%
TAGTTATAGCCTGTATTACT+AGG - chr3_3:6129022-6129041 None:intergenic 30.0%
TGTGCAAAATCAATAGTGAA+TGG + chr3_3:6129125-6129144 Msa0439770:CDS 30.0%
AATAGTGAATGGTACATTGA+GGG + chr3_3:6129136-6129155 Msa0439770:CDS 30.0%
! AAAAAGATTTTGGATGCTAC+TGG + chr3_3:6129299-6129318 Msa0439770:CDS 30.0%
TGAATGAGTGATTGTCAAAT+GGG + chr3_3:6129373-6129392 Msa0439770:intron 30.0%
! AGATAGTTTTCTTGTATGTC+AGG + chr3_3:6129426-6129445 Msa0439770:intron 30.0%
AAAACAATGGAGAGAGAAAA+AGG + chr3_3:6129706-6129725 Msa0439770:intron 30.0%
GTCCAAAAGTTGTCAAAAAA+TGG + chr3_3:6129773-6129792 Msa0439770:intron 30.0%
! TTTGAAGTAGGTCTGTAAAT+AGG + chr3_3:6130137-6130156 Msa0439770:intron 30.0%
!!! CTTGAAGTTTTTTCATAGGT+AGG + chr3_3:6130215-6130234 Msa0439770:intron 30.0%
CACACTCATAACAAATAGAT+AGG - chr3_3:6130272-6130291 None:intergenic 30.0%
CTAAAAGACACCTTCATATA+AGG - chr3_3:6130343-6130362 None:intergenic 30.0%
TATAACGGCAAAAATAAAGC+CGG + chr3_3:6130628-6130647 Msa0439770:intron 30.0%
AGTTGAAAAAAAACTTGAGG+GGG + chr3_3:6130829-6130848 Msa0439770:intron 30.0%
TTTGGTTATTAAATGCCATG+TGG - chr3_3:6131458-6131477 None:intergenic 30.0%
!! AATATAACGAGTTTGGGTTT+TGG + chr3_3:6131598-6131617 Msa0439770:intron 30.0%
AAGATGAATGTATGTGTGAA+GGG - chr3_3:6131986-6132005 None:intergenic 30.0%
! GGTTCACATGAATTTGTTTA+TGG - chr3_3:6132066-6132085 None:intergenic 30.0%
AAGATGAAAAGAGCAAAGAT+TGG - chr3_3:6132087-6132106 None:intergenic 30.0%
TTCATAGAAGCTAAAGAATG+CGG - chr3_3:6132122-6132141 None:intergenic 30.0%
AACAATAAAACTGGAGCAAA+GGG - chr3_3:6132597-6132616 None:intergenic 30.0%
AAACAATAAAACTGGAGCAA+AGG - chr3_3:6132598-6132617 None:intergenic 30.0%
TGTTTATAATAGTGACGAGA+TGG - chr3_3:6133048-6133067 None:intergenic 30.0%
AAATGCAACACTAGTATTAG+GGG + chr3_3:6133217-6133236 Msa0439770:intron 30.0%
TATTCATTATTCTTGCGGTT+TGG - chr3_3:6133409-6133428 None:intergenic 30.0%
ATGAATTGAAAGAGATGGAA+AGG - chr3_3:6133527-6133546 None:intergenic 30.0%
CTAAATTGACATGTGTTTGT+AGG - chr3_3:6133929-6133948 None:intergenic 30.0%
TCAAAAGAGGGCAAAATATA+GGG - chr3_3:6134215-6134234 None:intergenic 30.0%
AAGGACTATTTGTCAAAAGA+GGG - chr3_3:6134227-6134246 None:intergenic 30.0%
TAAGGACTATTTGTCAAAAG+AGG - chr3_3:6134228-6134247 None:intergenic 30.0%
TTGTTGATACGGGTTTATAA+TGG + chr3_3:6134363-6134382 Msa0439770:intron 30.0%
!! ATACGGGTTTATAATGGATT+GGG + chr3_3:6134369-6134388 Msa0439770:intron 30.0%
!! ATAAAATGGGTTAGATCCAT+GGG - chr3_3:6134422-6134441 None:intergenic 30.0%
!! AATAAAATGGGTTAGATCCA+TGG - chr3_3:6134423-6134442 None:intergenic 30.0%
! ATGGATCTAACCCATTTTAT+TGG + chr3_3:6134422-6134441 Msa0439770:intron 30.0%
AAGAAGAAGAAATTTGGGAA+AGG - chr3_3:6134539-6134558 None:intergenic 30.0%
! TCAAGAGAAATTCCTTTTTG+GGG - chr3_3:6134584-6134603 None:intergenic 30.0%
! GTCAAGAGAAATTCCTTTTT+GGG - chr3_3:6134585-6134604 None:intergenic 30.0%
! AGTCAAGAGAAATTCCTTTT+TGG - chr3_3:6134586-6134605 None:intergenic 30.0%
CTTATCATATAACGTTATGG+TGG - chr3_3:6134656-6134675 None:intergenic 30.0%
! TCTTTGGACTAGATTATGAA+AGG - chr3_3:6134779-6134798 None:intergenic 30.0%
AAAAAAAAGGAAAAGTGGCT+CGG - chr3_3:6134851-6134870 None:intergenic 30.0%
CACAAAATCATGAGATTTGA+GGG - chr3_3:6134891-6134910 None:intergenic 30.0%
ACACAAAATCATGAGATTTG+AGG - chr3_3:6134892-6134911 None:intergenic 30.0%
GATGAGAAATTTGATCCTTA+GGG + chr3_3:6134949-6134968 Msa0439770:intron 30.0%
ATGAGAAATTTGATCCTTAG+GGG + chr3_3:6134950-6134969 Msa0439770:intron 30.0%
GCATATAACAAGAAGATTGA+AGG + chr3_3:6134990-6135009 Msa0439770:intron 30.0%
AACAAGAAGATTGAAGGTTA+AGG + chr3_3:6134996-6135015 Msa0439770:intron 30.0%
AAGGACTTTGTGAAAAGTTT+AGG + chr3_3:6135124-6135143 Msa0439770:intron 30.0%
AGGACTTTGTGAAAAGTTTA+GGG + chr3_3:6135125-6135144 Msa0439770:intron 30.0%
ATGGCCACGTTAAAAAAAAT+TGG + chr3_3:6135289-6135308 Msa0439770:intron 30.0%
TGGCCACGTTAAAAAAAATT+GGG + chr3_3:6135290-6135309 Msa0439770:intron 30.0%
ATGGCCACGTTAAAAAAAAT+TGG + chr3_3:6135289-6135308 Msa0439770:intron 30.0%
TGGCCACGTTAAAAAAAATT+GGG + chr3_3:6135290-6135309 Msa0439770:intron 30.0%
ATTAAAGGAGGGCAAAATAT+AGG + chr3_3:6135563-6135582 Msa0439770:intron 30.0%
TTAAAGGAGGGCAAAATATA+GGG + chr3_3:6135564-6135583 Msa0439770:intron 30.0%
GACGATATCAATATGTTGAA+TGG + chr3_3:6135703-6135722 Msa0439770:intron 30.0%
TATGGAATGTTTACGTTGTT+TGG - chr3_3:6136469-6136488 None:intergenic 30.0%
TTGCAATTTATCTGCATTCA+GGG - chr3_3:6136776-6136795 None:intergenic 30.0%
TTTGCAATTTATCTGCATTC+AGG - chr3_3:6136777-6136796 None:intergenic 30.0%
TTTGCAATTTCTCTTCATTC+AGG + chr3_3:6136925-6136944 Msa0439770:intron 30.0%
TTGCAATTTCTCTTCATTCA+GGG + chr3_3:6136926-6136945 Msa0439770:intron 30.0%
TACTGGAGTAATACTAAATG+GGG - chr3_3:6136999-6137018 None:intergenic 30.0%
CTACTGGAGTAATACTAAAT+GGG - chr3_3:6137000-6137019 None:intergenic 30.0%
TCTACTGGAGTAATACTAAA+TGG - chr3_3:6137001-6137020 None:intergenic 30.0%
! TCTAAAGCGACATACAATTT+AGG - chr3_3:6137037-6137056 None:intergenic 30.0%
! TACGAGACATACCAATTTTT+GGG - chr3_3:6137480-6137499 None:intergenic 30.0%
! ATACGAGACATACCAATTTT+TGG - chr3_3:6137481-6137500 None:intergenic 30.0%
AGTTAGATGGTAGATAGATA+TGG - chr3_3:6137504-6137523 None:intergenic 30.0%
TAACTAGTGGTCGATAAAAT+TGG + chr3_3:6137519-6137538 Msa0439770:intron 30.0%
CTTGTATCACCATAAATTCA+AGG + chr3_3:6137549-6137568 Msa0439770:intron 30.0%
! ATCAATGCATATGCTATTTG+TGG + chr3_3:6137586-6137605 Msa0439770:intron 30.0%
! TGCTATTTGTGGAAATTTCA+AGG + chr3_3:6137597-6137616 Msa0439770:intron 30.0%
TTGCTTATATTAGTGACTGA+AGG + chr3_3:6137776-6137795 Msa0439770:intron 30.0%
TGCTTATATTAGTGACTGAA+GGG + chr3_3:6137777-6137796 Msa0439770:intron 30.0%
! GCAAATAACACTCATTGTTT+TGG - chr3_3:6137895-6137914 None:intergenic 30.0%
AGAAAAGTTGTACTAATCAC+TGG + chr3_3:6138038-6138057 Msa0439770:CDS 30.0%
! GTCACTTGTTGACATTAAAA+TGG + chr3_3:6138481-6138500 Msa0439770:CDS 30.0%
ACCAATAATGATAACATCAG+GGG - chr3_3:6138549-6138568 None:intergenic 30.0%
CACCAATAATGATAACATCA+GGG - chr3_3:6138550-6138569 None:intergenic 30.0%
!! TTACCTCTGAAATTGTAAGA+TGG + chr3_3:6139040-6139059 Msa0439770:intron 30.0%
CCCATAATATTTGCAAGAAT+AGG - chr3_3:6139135-6139154 None:intergenic 30.0%
AATGATATATCAGGCTAGTA+AGG + chr3_3:6139536-6139555 Msa0439770:intron 30.0%
! GAGACTTTAAGAATTGAACT+TGG + chr3_3:6139579-6139598 Msa0439770:CDS 30.0%
! CTTTAAGAATTGAACTTGGT+TGG + chr3_3:6139583-6139602 Msa0439770:CDS 30.0%
ATATTACTTTGACCCATGAA+GGG - chr3_3:6139773-6139792 None:intergenic 30.0%
AATATTACTTTGACCCATGA+AGG - chr3_3:6139774-6139793 None:intergenic 30.0%
TAAGCAGATTATCATTCTTC+CGG - chr3_3:6139872-6139891 None:intergenic 30.0%
TTTATTCTACCTTAAGCTCT+TGG - chr3_3:6139908-6139927 None:intergenic 30.0%
CAATAAGACAGTGTGATAAA+AGG - chr3_3:6140032-6140051 None:intergenic 30.0%
!!! AAAAGAATGGAGGTATTTTG+TGG - chr3_3:6140259-6140278 None:intergenic 30.0%
AGTGTGAGATTGAAAAAGAA+TGG - chr3_3:6140272-6140291 None:intergenic 30.0%
GCTATGGAGCATATTATAAA+AGG + chr3_3:6140409-6140428 Msa0439770:three_prime_UTR 30.0%
GGTTCAGGAACTTATGAATA+AGG - chr3_3:6127851-6127870 None:intergenic 35.0%
AGTAAGGAAAAGAAGGTGAA+TGG - chr3_3:6127885-6127904 None:intergenic 35.0%
GAAAAGGAGTAAGGAAAAGA+AGG - chr3_3:6127892-6127911 None:intergenic 35.0%
! TCCTTTTCTTACCACCATAT+TGG + chr3_3:6127904-6127923 Msa0439770:CDS 35.0%
TCCAATATGGTGGTAAGAAA+AGG - chr3_3:6127908-6127927 None:intergenic 35.0%
AATTTGAAGGTCCAATATGG+TGG - chr3_3:6127918-6127937 None:intergenic 35.0%
! CTTTACCAGCAACATTTTCA+GGG - chr3_3:6127968-6127987 None:intergenic 35.0%
! ACTTTACCAGCAACATTTTC+AGG - chr3_3:6127969-6127988 None:intergenic 35.0%
GCACGCATTATAATAACATC+AGG - chr3_3:6128213-6128232 None:intergenic 35.0%
! GATGAAACCGTTAACCATTT+TGG + chr3_3:6128270-6128289 Msa0439770:CDS 35.0%
ACGTCTACCAAAATGGTTAA+CGG - chr3_3:6128280-6128299 None:intergenic 35.0%
CATACATACGTCTACCAAAA+TGG - chr3_3:6128287-6128306 None:intergenic 35.0%
TTCTCTGTAATGCATTACAG+TGG + chr3_3:6128372-6128391 Msa0439770:intron 35.0%
ATGCATTACAGTGGATCATT+TGG + chr3_3:6128381-6128400 Msa0439770:intron 35.0%
GCTAACTACATGACTTTATC+TGG + chr3_3:6128488-6128507 Msa0439770:intron 35.0%
!! TGGCCTTATTGAGTTGAATT+GGG + chr3_3:6128508-6128527 Msa0439770:intron 35.0%
! TTTGGTAGGACACAAACTTT+TGG + chr3_3:6128556-6128575 Msa0439770:intron 35.0%
! TTGGTAGGACACAAACTTTT+GGG + chr3_3:6128557-6128576 Msa0439770:intron 35.0%
CAATAGTGAATGGTACATTG+AGG + chr3_3:6129135-6129154 Msa0439770:CDS 35.0%
ATAGTGAATGGTACATTGAG+GGG + chr3_3:6129137-6129156 Msa0439770:CDS 35.0%
TATGTCATTCTAAACCATGC+TGG - chr3_3:6129182-6129201 None:intergenic 35.0%
! AGCACCTAGCAAAAAGATTT+TGG + chr3_3:6129289-6129308 Msa0439770:CDS 35.0%
! GCATCCAAAATCTTTTTGCT+AGG - chr3_3:6129296-6129315 None:intergenic 35.0%
CTGAATGAGTGATTGTCAAA+TGG + chr3_3:6129372-6129391 Msa0439770:intron 35.0%
ATGTTAAAGACAGCAATGTC+CGG + chr3_3:6129539-6129558 Msa0439770:intron 35.0%
AAGAAATTAAGAAGCAGCAC+CGG - chr3_3:6129561-6129580 None:intergenic 35.0%
TCAGGTCAGGCTAAAAAAAT+AGG + chr3_3:6130163-6130182 Msa0439770:intron 35.0%
AAAAACTTCAAGCTCGAATC+TGG - chr3_3:6130207-6130226 None:intergenic 35.0%
!!! CGAGCTTGAAGTTTTTTCAT+AGG + chr3_3:6130211-6130230 Msa0439770:intron 35.0%
TCATAACAAATAGATAGGCC+AGG - chr3_3:6130267-6130286 None:intergenic 35.0%
CTAGAAGACACCTTATATGA+AGG + chr3_3:6130330-6130349 Msa0439770:intron 35.0%
AAAGTGAAAATCACACCTTG+AGG + chr3_3:6130440-6130459 Msa0439770:intron 35.0%
TTGCTAAAAGACACCTTCAT+GGG + chr3_3:6130469-6130488 Msa0439770:intron 35.0%
TTATATGATCTCCTACGGTA+GGG - chr3_3:6133976-6133995 None:intergenic 35.0%
TTTATATGATCTCCTACGGT+AGG - chr3_3:6133975-6133994 None:intergenic 35.0%
ACCGTAGGAGATCATATAAA+AGG + chr3_3:6130901-6130920 Msa0439770:intron 35.0%
! CCCTTTTATATGATCTCCTA+CGG - chr3_3:6133971-6133990 None:intergenic 35.0%
CCGTAGGAGATCATATAAAA+GGG + chr3_3:6130902-6130921 Msa0439770:intron 35.0%
AATTGACATGTGTTTGCATG+TGG + chr3_3:6130954-6130973 Msa0439770:intron 35.0%
TGCTTATAATAGTGACGAGA+TGG + chr3_3:6131155-6131174 Msa0439770:intron 35.0%
TATAACGTGAGTATGAGAGA+AGG - chr3_3:6132984-6133003 None:intergenic 35.0%
!!! TATAACATGTTTTTGGTCCC+TGG + chr3_3:6131300-6131319 Msa0439770:intron 35.0%
! ACCCCACTTTATTGATGATT+TGG + chr3_3:6131382-6131401 Msa0439770:intron 35.0%
GCCAAATCATCAATAAAGTG+GGG - chr3_3:6132771-6132790 None:intergenic 35.0%
CGCCAAATCATCAATAAAGT+GGG - chr3_3:6132770-6132789 None:intergenic 35.0%
!! ATTATAGCGAGTTTGGGTTT+TGG - chr3_3:6131545-6131564 None:intergenic 35.0%
CCAAACTCGTTATATTTGCA+GGG - chr3_3:6131594-6131613 None:intergenic 35.0%
CCTGCAAATATAACGAGTTT+GGG + chr3_3:6131592-6131611 Msa0439770:intron 35.0%
! ACCCCACTTTATTGATGATT+TGG + chr3_3:6131382-6131401 Msa0439770:intron 35.0%
GCCAAATCATCAATAAAGTG+GGG - chr3_3:6132771-6132790 None:intergenic 35.0%
CGCCAAATCATCAATAAAGT+GGG - chr3_3:6132770-6132789 None:intergenic 35.0%
GAAGATGAATGTATGTGTGA+AGG - chr3_3:6131987-6132006 None:intergenic 35.0%
! TTGCAAATGTTTCTGTGAGT+GGG - chr3_3:6132036-6132055 None:intergenic 35.0%
! ATTGCAAATGTTTCTGTGAG+TGG - chr3_3:6132037-6132056 None:intergenic 35.0%
TAAGCCTAGATCTTATGAGA+GGG + chr3_3:6132385-6132404 Msa0439770:intron 35.0%
TATTCTCATCTTGGATTTGC+AGG - chr3_3:6132441-6132460 None:intergenic 35.0%
! AGGAAGAAGAATGATGATGA+AGG + chr3_3:6132493-6132512 Msa0439770:intron 35.0%
! GAATGATGATGAAGGATCAT+AGG + chr3_3:6132501-6132520 Msa0439770:intron 35.0%
TTCCATTGAAGAAGAAGCAA+AGG + chr3_3:6132533-6132552 Msa0439770:intron 35.0%
TTCCTTTGCTTCTTCTTCAA+TGG - chr3_3:6132538-6132557 None:intergenic 35.0%
ATTGAAGAAGAAGCAAAGGA+AGG + chr3_3:6132537-6132556 Msa0439770:intron 35.0%
AGCAAAGGGGAAAATCTTTA+CGG - chr3_3:6132583-6132602 None:intergenic 35.0%
ACAATAAAACTGGAGCAAAG+GGG - chr3_3:6132596-6132615 None:intergenic 35.0%
CGCCAAATCATCAATAAAGT+GGG + chr3_3:6132770-6132789 Msa0439770:intron 35.0%
GCCAAATCATCAATAAAGTG+GGG + chr3_3:6132771-6132790 Msa0439770:intron 35.0%
! ACCCCACTTTATTGATGATT+TGG - chr3_3:6131382-6131401 None:intergenic 35.0%
!! AATATAGCGAGTTTGGGTTT+TGG - chr3_3:6132863-6132882 None:intergenic 35.0%
CCTTCAAATATAGCGAGTTT+GGG - chr3_3:6132869-6132888 None:intergenic 35.0%
CCAAACTCGCTATATTTGAA+GGG + chr3_3:6132867-6132886 Msa0439770:intron 35.0%
TATAACGTGAGTATGAGAGA+AGG + chr3_3:6132984-6133003 Msa0439770:intron 35.0%
!!! GTTTTTCTATTGGGTTGGTT+CGG - chr3_3:6133252-6133271 None:intergenic 35.0%
!! TGGTTTGCGGTTTTTCTATT+GGG - chr3_3:6133261-6133280 None:intergenic 35.0%
!!! TTGGTTTGCGGTTTTTCTAT+TGG - chr3_3:6133262-6133281 None:intergenic 35.0%
!! ATTATTCTTGCGGTTTGGTT+TGG - chr3_3:6133404-6133423 None:intergenic 35.0%
GGAATTAGAATCGAACTTGA+TGG - chr3_3:6133506-6133525 None:intergenic 35.0%
! AGATAAAAAAGCATGCGGTT+TGG - chr3_3:6133824-6133843 None:intergenic 35.0%
GCACAATAGATACTAGTTAG+GGG - chr3_3:6133900-6133919 None:intergenic 35.0%
GGCACAATAGATACTAGTTA+GGG - chr3_3:6133901-6133920 None:intergenic 35.0%
AGGCACAATAGATACTAGTT+AGG - chr3_3:6133902-6133921 None:intergenic 35.0%
AATTGACATGTGTTTGTAGG+TGG - chr3_3:6133926-6133945 None:intergenic 35.0%
CCGTAGGAGATCATATAAAA+GGG - chr3_3:6130902-6130921 None:intergenic 35.0%
! CCCTTTTATATGATCTCCTA+CGG + chr3_3:6133971-6133990 Msa0439770:intron 35.0%
ACCGTAGGAGATCATATAAA+AGG - chr3_3:6130901-6130920 None:intergenic 35.0%
TTTATATGATCTCCTACGGT+AGG + chr3_3:6133975-6133994 Msa0439770:intron 35.0%
TTATATGATCTCCTACGGTA+GGG + chr3_3:6133976-6133995 Msa0439770:intron 35.0%
GTCAAAAGAGGGCAAAATAT+AGG - chr3_3:6134216-6134235 None:intergenic 35.0%
AATAATCCCCAATCACCAAA+CGG + chr3_3:6134315-6134334 Msa0439770:intron 35.0%
!! GATACGGGTTTATAATGGAT+TGG + chr3_3:6134368-6134387 Msa0439770:intron 35.0%
!! GTCATTTTACCCATTTCGTT+TGG - chr3_3:6134395-6134414 None:intergenic 35.0%
! GGAGGAAGAAGGAAAATTTT+GGG - chr3_3:6134501-6134520 None:intergenic 35.0%
! AGGAGGAAGAAGGAAAATTT+TGG - chr3_3:6134502-6134521 None:intergenic 35.0%
GGAGGAAGAAGAAGAAATTT+GGG - chr3_3:6134544-6134563 None:intergenic 35.0%
AGGAGGAAGAAGAAGAAATT+TGG - chr3_3:6134545-6134564 None:intergenic 35.0%
GATTATGAAAGGTTGTGACT+AGG - chr3_3:6134768-6134787 None:intergenic 35.0%
ATCTAGTCCAAAGAACACAA+AGG + chr3_3:6134785-6134804 Msa0439770:intron 35.0%
TCTAGTCCAAAGAACACAAA+GGG + chr3_3:6134786-6134805 Msa0439770:intron 35.0%
AACTTACCCTTTGTGTTCTT+TGG - chr3_3:6134795-6134814 None:intergenic 35.0%
! TCATTCCTTTTCATCTATGG+TGG + chr3_3:6134825-6134844 Msa0439770:intron 35.0%
GATTTGAGGGAAGAATTCAA+AGG - chr3_3:6134878-6134897 None:intergenic 35.0%
GGATGAGAAATTTGATCCTT+AGG + chr3_3:6134948-6134967 Msa0439770:intron 35.0%
! ATATGCCTCTAAAGATGTGT+TGG - chr3_3:6134976-6134995 None:intergenic 35.0%
AAGAAGATTGAAGGTTAAGG+AGG + chr3_3:6134999-6135018 Msa0439770:intron 35.0%
ATCTACTGAAATGGCTCTTA+AGG + chr3_3:6135063-6135082 Msa0439770:intron 35.0%
ATGGATGTATATGTGGCAAT+GGG - chr3_3:6135265-6135284 None:intergenic 35.0%
CATACACATGGATGTATATG+TGG - chr3_3:6135272-6135291 None:intergenic 35.0%
CACATATACATCCATGTGTA+TGG + chr3_3:6135270-6135289 Msa0439770:intron 35.0%
GGCCACGTTAAAAAAAATTG+GGG + chr3_3:6135291-6135310 Msa0439770:intron 35.0%
GCATCTCGTTAAGAAATTGA+CGG + chr3_3:6135333-6135352 Msa0439770:intron 35.0%
ATGGATGTATATGTGGCAAT+GGG - chr3_3:6135265-6135284 None:intergenic 35.0%
CATACACATGGATGTATATG+TGG - chr3_3:6135272-6135291 None:intergenic 35.0%
CACATATACATCCATGTGTA+TGG + chr3_3:6135270-6135289 Msa0439770:intron 35.0%
GGCCACGTTAAAAAAAATTG+GGG + chr3_3:6135291-6135310 Msa0439770:intron 35.0%
GCATCTCGTTAAGAAATTGA+CGG + chr3_3:6135333-6135352 Msa0439770:intron 35.0%
GCAGGGACTATTAATGATAA+CGG + chr3_3:6135489-6135508 Msa0439770:intron 35.0%
!!! TTGATTGGTTTTGTTTGGCA+TGG - chr3_3:6135679-6135698 None:intergenic 35.0%
TGCCAAACAAAACCAATCAA+AGG + chr3_3:6135679-6135698 Msa0439770:intron 35.0%
!!! CTCCTTTGATTGGTTTTGTT+TGG - chr3_3:6135684-6135703 None:intergenic 35.0%
TTGATATCGTCTCCTTTGAT+TGG - chr3_3:6135694-6135713 None:intergenic 35.0%
! GCATACTTGACAACCTTTTT+AGG + chr3_3:6136146-6136165 Msa0439770:intron 35.0%
TCTGGTATGGCTACATAAAT+GGG - chr3_3:6136327-6136346 None:intergenic 35.0%
ATCTGGTATGGCTACATAAA+TGG - chr3_3:6136328-6136347 None:intergenic 35.0%
TTTATGTAGCCATACCAGAT+CGG + chr3_3:6136328-6136347 Msa0439770:intron 35.0%
AAAGCGCGTGAGAAATTAAT+AGG - chr3_3:6136425-6136444 None:intergenic 35.0%
TCAATTCAATGCAAGTAGAG+AGG - chr3_3:6136578-6136597 None:intergenic 35.0%
TCTCTACTTGCATTGAATTG+AGG + chr3_3:6136577-6136596 Msa0439770:intron 35.0%
ACTAACAAGGTCTACATTCA+GGG - chr3_3:6136805-6136824 None:intergenic 35.0%
AGGGACTAAATTGACTAACA+AGG - chr3_3:6136818-6136837 None:intergenic 35.0%
ACTAACGAAGTTTGCATTCA+GGG - chr3_3:6136837-6136856 None:intergenic 35.0%
ACTAATGGAGTCTACATTCA+GGG - chr3_3:6136869-6136888 None:intergenic 35.0%
! AGTCACTTTAGTCCATGAAT+GGG - chr3_3:6136972-6136991 None:intergenic 35.0%
! TAGTCACTTTAGTCCATGAA+TGG - chr3_3:6136973-6136992 None:intergenic 35.0%
AAGCGACATACAATTTAGGA+CGG - chr3_3:6137033-6137052 None:intergenic 35.0%
AGAGAGTAGTTTACTCCATT+CGG + chr3_3:6137299-6137318 Msa0439770:intron 35.0%
TCTATCTACCATCTAACTAG+TGG + chr3_3:6137506-6137525 Msa0439770:intron 35.0%
TTTATCGACCACTAGTTAGA+TGG - chr3_3:6137517-6137536 None:intergenic 35.0%
TGGTATAGGCCTTGAATTTA+TGG - chr3_3:6137561-6137580 None:intergenic 35.0%
!! TGCATTGATGATGATGGTAT+AGG - chr3_3:6137575-6137594 None:intergenic 35.0%
!! AGCATATGCATTGATGATGA+TGG - chr3_3:6137581-6137600 None:intergenic 35.0%
TATATACTGTATACACCCTC+CGG + chr3_3:6137642-6137661 Msa0439770:intron 35.0%
TGCTTATATTAGTAACCGGA+GGG - chr3_3:6137660-6137679 None:intergenic 35.0%
TTGCTTATATTAGTAACCGG+AGG - chr3_3:6137661-6137680 None:intergenic 35.0%
TGTAAGGTAGCATGATGATA+GGG - chr3_3:6137962-6137981 None:intergenic 35.0%
ATGTAAGGTAGCATGATGAT+AGG - chr3_3:6137963-6137982 None:intergenic 35.0%
!! GTTTTATTAGCAAATGGCAG+TGG - chr3_3:6138392-6138411 None:intergenic 35.0%
TCCCCTGATGTTATCATTAT+TGG + chr3_3:6138545-6138564 Msa0439770:CDS 35.0%
GCACCAATAATGATAACATC+AGG - chr3_3:6138551-6138570 None:intergenic 35.0%
!! GTACTTTTTGTTTCATGCAG+TGG + chr3_3:6138696-6138715 Msa0439770:intron 35.0%
GATCATCTGGTAAATAATGC+TGG + chr3_3:6138718-6138737 Msa0439770:CDS 35.0%
!!! AAGGTTGGTAGAGGATTTTT+CGG + chr3_3:6138756-6138775 Msa0439770:CDS 35.0%
GTTCCATCTTACAATTTCAG+AGG - chr3_3:6139046-6139065 None:intergenic 35.0%
TTTCTCAGGAAACAAACTTC+TGG + chr3_3:6139271-6139290 Msa0439770:intron 35.0%
TTCTCAGGAAACAAACTTCT+GGG + chr3_3:6139272-6139291 Msa0439770:intron 35.0%
ACGTTATAGATACTGAGTCT+CGG - chr3_3:6139393-6139412 None:intergenic 35.0%
!! ATTGAACTTGGTTGGTCTAT+TGG + chr3_3:6139591-6139610 Msa0439770:CDS 35.0%
!!! TGTTTTGATAAAACCAGGTG+TGG - chr3_3:6139628-6139647 None:intergenic 35.0%
!!! AGGTCTGTTTTGATAAAACC+AGG - chr3_3:6139633-6139652 None:intergenic 35.0%
!!! TGGTTTTATCAAAACAGACC+TGG + chr3_3:6139632-6139651 Msa0439770:CDS 35.0%
GATTATCATTCTTCCGGTAA+GGG - chr3_3:6139866-6139885 None:intergenic 35.0%
AGATTATCATTCTTCCGGTA+AGG - chr3_3:6139867-6139886 None:intergenic 35.0%
TCCAAATTAGAACCGTTTGT+TGG - chr3_3:6139977-6139996 None:intergenic 35.0%
! TATTTTGTGGTGAAAAGAGG+AGG - chr3_3:6140246-6140265 None:intergenic 35.0%
! AGGTATTTTGTGGTGAAAAG+AGG - chr3_3:6140249-6140268 None:intergenic 35.0%
GTGAGATTGAAAAAGAATGG+AGG - chr3_3:6140269-6140288 None:intergenic 35.0%
ATAGTAGTACCTCATTTGCA+AGG + chr3_3:6140384-6140403 Msa0439770:three_prime_UTR 35.0%
TGGAGCATATTATAAAAGGG+AGG + chr3_3:6140413-6140432 Msa0439770:three_prime_UTR 35.0%
AAGGAAAAGAAGGTGAATGG+AGG - chr3_3:6127882-6127901 None:intergenic 40.0%
TGGTGGTAAGAAAAGGAGTA+AGG - chr3_3:6127901-6127920 None:intergenic 40.0%
TTCTTCCCTGAAAATGTTGC+TGG + chr3_3:6127960-6127979 Msa0439770:CDS 40.0%
GGTAAAGTTGTTCACATCAC+TGG + chr3_3:6127981-6128000 Msa0439770:CDS 40.0%
! TTTTACCTCTCCAATACCAG+AGG - chr3_3:6128012-6128031 None:intergenic 40.0%
!! AGTTGATGATTGTAGGCGTT+TGG + chr3_3:6128245-6128264 Msa0439770:CDS 40.0%
!! CTGGCCTTATTGAGTTGAAT+TGG + chr3_3:6128507-6128526 Msa0439770:intron 40.0%
! TGGTAGGACACAAACTTTTG+GGG + chr3_3:6128558-6128577 Msa0439770:intron 40.0%
TGAGGTGTGGTAAAGCAAAA+CGG - chr3_3:6128599-6128618 None:intergenic 40.0%
AAACAGCAGAGGCAAAATTG+TGG + chr3_3:6128620-6128639 Msa0439770:CDS 40.0%
GAAACATTGAGGGTTGAAGT+TGG + chr3_3:6128848-6128867 Msa0439770:CDS 40.0%
GGTGTAACAATTGTTACACC+AGG + chr3_3:6128881-6128900 Msa0439770:CDS 40.0%
TGGCAATAAGACTTTGCCTT+TGG - chr3_3:6128927-6128946 None:intergenic 40.0%
!! AAAGTCTTATTGCCACCAGA+AGG + chr3_3:6128932-6128951 Msa0439770:CDS 40.0%
AGTGTTGTGTCCAGAATTGT+TGG + chr3_3:6129211-6129230 Msa0439770:CDS 40.0%
TCAGGAGATCGAATTGAAGA+TGG - chr3_3:6129344-6129363 None:intergenic 40.0%
ATCTTCAATTCGATCTCCTG+AGG + chr3_3:6129343-6129362 Msa0439770:intron 40.0%
!!! TGTCAAATGGGAGTGTCTTT+TGG + chr3_3:6129385-6129404 Msa0439770:intron 40.0%
!!! GTCAAATGGGAGTGTCTTTT+GGG + chr3_3:6129386-6129405 Msa0439770:intron 40.0%
!!! TCAAATGGGAGTGTCTTTTG+GGG + chr3_3:6129387-6129406 Msa0439770:intron 40.0%
GACTTGACAGTCAAGTCTTA+CGG + chr3_3:6129984-6130003 Msa0439770:intron 40.0%
GTCAAGTCTTACGGTGAAAT+AGG + chr3_3:6129993-6130012 Msa0439770:intron 40.0%
AGGTCTGTAAATAGGCTTTC+AGG + chr3_3:6130145-6130164 Msa0439770:intron 40.0%
! TGTAAATAGGCTTTCAGGTC+AGG + chr3_3:6130150-6130169 Msa0439770:intron 40.0%
CTTGCTAAAAGACACCTTCA+TGG + chr3_3:6130468-6130487 Msa0439770:intron 40.0%
!! TTTGTGTTGCTTTCGACAGA+TGG - chr3_3:6130548-6130567 None:intergenic 40.0%
TTGAGGGGGATGATTTACAA+TGG + chr3_3:6130843-6130862 Msa0439770:intron 40.0%
!! ATTTACAATGGTGCCGTCTA+CGG + chr3_3:6130855-6130874 Msa0439770:intron 40.0%
TATATGATCTCCTACGGTAG+GGG - chr3_3:6133977-6133996 None:intergenic 40.0%
GCGCCAAATCATCAATAAAG+TGG - chr3_3:6132769-6132788 None:intergenic 40.0%
!! GATGATTTGGCGCATTTTTG+CGG + chr3_3:6131395-6131414 Msa0439770:intron 40.0%
CCCTGCAAATATAACGAGTT+TGG + chr3_3:6131591-6131610 Msa0439770:intron 40.0%
CCCAAACTCGTTATATTTGC+AGG - chr3_3:6131595-6131614 None:intergenic 40.0%
GCGCCAAATCATCAATAAAG+TGG - chr3_3:6132769-6132788 None:intergenic 40.0%
!! GATGATTTGGCGCATTTTTG+CGG + chr3_3:6131395-6131414 Msa0439770:intron 40.0%
TATCTTTGCTGCCCAGAATT+TGG + chr3_3:6131901-6131920 Msa0439770:intron 40.0%
AGACCTGGGAATTGGAATTT+GGG - chr3_3:6131953-6131972 None:intergenic 40.0%
ATAGAAGCTAAAGAATGCGG+TGG - chr3_3:6132119-6132138 None:intergenic 40.0%
GTATCGTCGCTACTTATGAA+GGG + chr3_3:6132218-6132237 Msa0439770:intron 40.0%
CATAAGATCTAGGCTTACTC+CGG - chr3_3:6132382-6132401 None:intergenic 40.0%
GTAAGCCTAGATCTTATGAG+AGG + chr3_3:6132384-6132403 Msa0439770:intron 40.0%
AAGCCTAGATCTTATGAGAG+GGG + chr3_3:6132386-6132405 Msa0439770:intron 40.0%
AAACCCCTCTCATAAGATCT+AGG - chr3_3:6132392-6132411 None:intergenic 40.0%
TTTCAATGATTGACACGCAG+AGG + chr3_3:6132473-6132492 Msa0439770:intron 40.0%
AGAAGAAGCAAAGGAAGGAA+AGG + chr3_3:6132542-6132561 Msa0439770:intron 40.0%
GAAGAAGCAAAGGAAGGAAA+GGG + chr3_3:6132543-6132562 Msa0439770:intron 40.0%
AAGAAGCAAAGGAAGGAAAG+GGG + chr3_3:6132544-6132563 Msa0439770:intron 40.0%
!! GATGATTTGGCGCATTTTTG+CGG - chr3_3:6131395-6131414 None:intergenic 40.0%
GCGCCAAATCATCAATAAAG+TGG + chr3_3:6132769-6132788 Msa0439770:intron 40.0%
ATCATCAATAAAGTGGGGTC+AGG + chr3_3:6132776-6132795 Msa0439770:intron 40.0%
TCATCAATAAAGTGGGGTCA+GGG + chr3_3:6132777-6132796 Msa0439770:intron 40.0%
CCCAAACTCGCTATATTTGA+AGG + chr3_3:6132866-6132885 Msa0439770:intron 40.0%
CCCTTCAAATATAGCGAGTT+TGG - chr3_3:6132870-6132889 None:intergenic 40.0%
! TTGCGGTTTTTCTATTGGGT+TGG - chr3_3:6133257-6133276 None:intergenic 40.0%
!! GTTTGGATTGGTTTGGTTTG+CGG - chr3_3:6133274-6133293 None:intergenic 40.0%
!! GGTTTCAGTTTGGATTGGTT+TGG - chr3_3:6133281-6133300 None:intergenic 40.0%
TTTGCGGTTTCAGTTTGGAT+TGG - chr3_3:6133286-6133305 None:intergenic 40.0%
!!! GGTTTTTTGCGGTTTCAGTT+TGG - chr3_3:6133291-6133310 None:intergenic 40.0%
CAAACCAAACCAAACCAATG+CGG - chr3_3:6133771-6133790 None:intergenic 40.0%
!! AAAAAGCATGCGGTTTGGTT+TGG - chr3_3:6133819-6133838 None:intergenic 40.0%
!!! TGCTTTTTTATCTCGCGGTT+TGG + chr3_3:6133831-6133850 Msa0439770:intron 40.0%
TATATGATCTCCTACGGTAG+GGG + chr3_3:6133977-6133996 Msa0439770:intron 40.0%
TTGTTAATCAGTGCCGTCTA+CGG - chr3_3:6134021-6134040 None:intergenic 40.0%
TTGGGGATTATTTGACAGCA+GGG - chr3_3:6134307-6134326 None:intergenic 40.0%
ATTGGGGATTATTTGACAGC+AGG - chr3_3:6134308-6134327 None:intergenic 40.0%
!! TTTTTGGGGAAGAAGAGAGA+AGG - chr3_3:6134570-6134589 None:intergenic 40.0%
TTCTCTCTTCTTCCCCAAAA+AGG + chr3_3:6134569-6134588 Msa0439770:intron 40.0%
TGACTAGGAAACATGCAAGA+GGG - chr3_3:6134753-6134772 None:intergenic 40.0%
! GGCTTTGACATCTACTGAAA+TGG + chr3_3:6135054-6135073 Msa0439770:intron 40.0%
! TTTTGGTACTTGGATGGAGA+AGG + chr3_3:6135105-6135124 Msa0439770:intron 40.0%
CATGGATGTATATGTGGCAA+TGG - chr3_3:6135266-6135285 None:intergenic 40.0%
! TTTTAACGTGGCCATACACA+TGG - chr3_3:6135284-6135303 None:intergenic 40.0%
!!! GGCCCCAATTTTTTTTAACG+TGG - chr3_3:6135296-6135315 None:intergenic 40.0%
AAAAAAAATTGGGGCCCACT+TGG + chr3_3:6135300-6135319 Msa0439770:intron 40.0%
TCGTTAAGAAATTGACGGCA+GGG + chr3_3:6135338-6135357 Msa0439770:intron 40.0%
CATGGATGTATATGTGGCAA+TGG - chr3_3:6135266-6135285 None:intergenic 40.0%
! TTTTAACGTGGCCATACACA+TGG - chr3_3:6135284-6135303 None:intergenic 40.0%
!!! GGCCCCAATTTTTTTTAACG+TGG - chr3_3:6135296-6135315 None:intergenic 40.0%
AAAAAAAATTGGGGCCCACT+TGG + chr3_3:6135300-6135319 Msa0439770:intron 40.0%
TCGTTAAGAAATTGACGGCA+GGG + chr3_3:6135338-6135357 Msa0439770:intron 40.0%
! ACATCGATGTCTAGCGTTTT+AGG + chr3_3:6135750-6135769 Msa0439770:intron 40.0%
GCAAGTTTCTTTCTTTGCCT+TGG + chr3_3:6136082-6136101 Msa0439770:intron 40.0%
TTATGTAGCCATACCAGATC+GGG + chr3_3:6136329-6136348 Msa0439770:intron 40.0%
!!! CTCACGCGCTTTATTTTGTT+TGG + chr3_3:6136433-6136452 Msa0439770:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+CGG + chr3_3:6136730-6136749 Msa0439770:intron 40.0%
GACTAACAAGGTCTACATTC+AGG - chr3_3:6136806-6136825 None:intergenic 40.0%
GACTAACGAAGTTTGCATTC+AGG - chr3_3:6136838-6136857 None:intergenic 40.0%
GACTAATGGAGTCTACATTC+AGG - chr3_3:6136870-6136889 None:intergenic 40.0%
TCAGGGACTAAAGTGACTAA+TGG - chr3_3:6136728-6136747 None:intergenic 40.0%
TCTTCATTCAGGGACTAAAG+TGG + chr3_3:6136936-6136955 Msa0439770:intron 40.0%
! GACATACAATTTAGGACGGA+GGG - chr3_3:6137029-6137048 None:intergenic 40.0%
GTTGGTGCGAACAGAAAATA+TGG + chr3_3:6138013-6138032 Msa0439770:CDS 40.0%
AATGGAGAATCTAGTAGCAG+TGG + chr3_3:6138499-6138518 Msa0439770:CDS 40.0%
AATTATTGGGGTTCCAAGGT+TGG + chr3_3:6138741-6138760 Msa0439770:CDS 40.0%
GAAAAATCCTCTACCAACCT+TGG - chr3_3:6138757-6138776 None:intergenic 40.0%
ACAAAAACGGTCATGCTAAC+CGG + chr3_3:6139173-6139192 Msa0439770:intron 40.0%
TCTCAGGAAACAAACTTCTG+GGG + chr3_3:6139273-6139292 Msa0439770:intron 40.0%
TAGATACTGAGTCTCGGAAT+TGG - chr3_3:6139387-6139406 None:intergenic 40.0%
ATTCAGGGTCATTGAAGATG+AGG + chr3_3:6139656-6139675 Msa0439770:CDS 40.0%
ATTGAAGATGAGGCTACTCT+GGG + chr3_3:6139666-6139685 Msa0439770:CDS 40.0%
CATTCAACTGATGAACCCAA+TGG - chr3_3:6139699-6139718 None:intergenic 40.0%
TTCATCAGTTGAATGTGCCA+AGG + chr3_3:6139704-6139723 Msa0439770:CDS 40.0%
TGTATGTGACAAACCCTTCA+TGG + chr3_3:6139757-6139776 Msa0439770:CDS 40.0%
GTATGTGACAAACCCTTCAT+GGG + chr3_3:6139758-6139777 Msa0439770:CDS 40.0%
! AATCCCAAAGATGTGTCGTT+GGG - chr3_3:6139835-6139854 None:intergenic 40.0%
AAATCCCAAAGATGTGTCGT+TGG - chr3_3:6139836-6139855 None:intergenic 40.0%
!! GGATTTTGACAAACCCTTAC+CGG + chr3_3:6139850-6139869 Msa0439770:CDS 40.0%
! CTTAAGCTCTTGGTAACTCT+TGG - chr3_3:6139898-6139917 None:intergenic 40.0%
CAAGAGTTACCAAGAGCTTA+AGG + chr3_3:6139896-6139915 Msa0439770:CDS 40.0%
TTAGGGACTTAGCCAACAAA+CGG + chr3_3:6139962-6139981 Msa0439770:three_prime_UTR 40.0%
! GCCAACAAACGGTTCTAATT+TGG + chr3_3:6139973-6139992 Msa0439770:three_prime_UTR 40.0%
GCTTACGAGTATGCTAAGAG+AGG + chr3_3:6128111-6128130 Msa0439770:CDS 45.0%
GAGCTCTATCAGCAACTTCA+CGG - chr3_3:6128176-6128195 None:intergenic 45.0%
! GCTGATAGAGCTCGTGATTT+TGG + chr3_3:6128183-6128202 Msa0439770:CDS 45.0%
TACCATGAGAGGTCTCCAAT+TGG - chr3_3:6128461-6128480 None:intergenic 45.0%
GAGGTGTGGTAAAGCAAAAC+GGG - chr3_3:6128598-6128617 None:intergenic 45.0%
!!! TTTTGCCTCTGCTGTTTCTG+AGG - chr3_3:6128617-6128636 None:intergenic 45.0%
TATATACTCCTTCTGGGTGC+AGG - chr3_3:6128672-6128691 None:intergenic 45.0%
AGTAAACACTACTACCCTGC+AGG + chr3_3:6128796-6128815 Msa0439770:intron 45.0%
ATTGCCACCAGAAGGCAAAA+TGG + chr3_3:6128940-6128959 Msa0439770:CDS 45.0%
TTGCCACCAGAAGGCAAAAT+GGG + chr3_3:6128941-6128960 Msa0439770:CDS 45.0%
ATGGTACATTGAGGGGAGAT+AGG + chr3_3:6129144-6129163 Msa0439770:CDS 45.0%
TGTGTCCAGAATTGTTGGAG+TGG + chr3_3:6129216-6129235 Msa0439770:CDS 45.0%
GTGTCCAGAATTGTTGGAGT+GGG + chr3_3:6129217-6129236 Msa0439770:CDS 45.0%
TGTCCAGAATTGTTGGAGTG+GGG + chr3_3:6129218-6129237 Msa0439770:CDS 45.0%
AAACCCCACTCCAACAATTC+TGG - chr3_3:6129224-6129243 None:intergenic 45.0%
ACTCATTCAGTCTTGACCTC+AGG - chr3_3:6129362-6129381 None:intergenic 45.0%
TCAAGCTCGAATCTGGTCTA+TGG - chr3_3:6130200-6130219 None:intergenic 45.0%
! AGGTCAGACGAGGCTTTAAT+AGG - chr3_3:6130247-6130266 None:intergenic 45.0%
TATTAAAGCCTCGTCTGACC+TGG + chr3_3:6130246-6130265 Msa0439770:intron 45.0%
! TTTTAGCAAGTCACGCCTCA+AGG - chr3_3:6130458-6130477 None:intergenic 45.0%
CTAAAAGACACCTTCATGGG+TGG + chr3_3:6130472-6130491 Msa0439770:intron 45.0%
GACATGTGTTTGCATGTGGT+TGG + chr3_3:6130958-6130977 Msa0439770:intron 45.0%
!! CGAGTAGCGAGTTTGAGTTT+TGG - chr3_3:6131476-6131495 None:intergenic 45.0%
ATTGGAATTTGGGAGAGAGG+AGG - chr3_3:6131943-6131962 None:intergenic 45.0%
GGAATTGGAATTTGGGAGAG+AGG - chr3_3:6131946-6131965 None:intergenic 45.0%
TCTCCCAAATTCCAATTCCC+AGG + chr3_3:6131947-6131966 Msa0439770:intron 45.0%
CAGACCTGGGAATTGGAATT+TGG - chr3_3:6131954-6131973 None:intergenic 45.0%
TTCTATGAACAGCGTCACCA+TGG + chr3_3:6132133-6132152 Msa0439770:intron 45.0%
TCTATGAACAGCGTCACCAT+GGG + chr3_3:6132134-6132153 Msa0439770:intron 45.0%
!!! AGCTCCGGTGATGGTTTTAT+GGG + chr3_3:6132192-6132211 Msa0439770:intron 45.0%
CCTTCCCATAAAACCATCAC+CGG - chr3_3:6132199-6132218 None:intergenic 45.0%
GGTATCGTCGCTACTTATGA+AGG + chr3_3:6132217-6132236 Msa0439770:intron 45.0%
GTGGTTACTGCTCATCACAA+AGG + chr3_3:6132244-6132263 Msa0439770:intron 45.0%
! ACCAGAGCATTACTGTTCGT+CGG + chr3_3:6132273-6132292 Msa0439770:intron 45.0%
AGAAGCAAAGGAAGGAAAGG+GGG + chr3_3:6132545-6132564 Msa0439770:intron 45.0%
AGGAAGGAAAGGGGGAATAT+AGG + chr3_3:6132553-6132572 Msa0439770:intron 45.0%
GGAAGGAAAGGGGGAATATA+GGG + chr3_3:6132554-6132573 Msa0439770:intron 45.0%
AAACCGCAAAAAACCGCACT+TGG + chr3_3:6133296-6133315 Msa0439770:intron 45.0%
!!! GAACCAAGTGCGGTTTTTTG+CGG - chr3_3:6133302-6133321 None:intergenic 45.0%
GCAAAAAACCGCACTTGGTT+CGG + chr3_3:6133301-6133320 Msa0439770:intron 45.0%
GAATTCATCCGAACCAAGTG+CGG - chr3_3:6133312-6133331 None:intergenic 45.0%
!! CGGTTTGGTTTGGTTTGGTT+CGG - chr3_3:6133394-6133413 None:intergenic 45.0%
!! TCTTGCGGTTTGGTTTGGTT+TGG - chr3_3:6133399-6133418 None:intergenic 45.0%
!! CGAACTTGATGGTGCAACAA+TGG - chr3_3:6133495-6133514 None:intergenic 45.0%
!! TTGGATTGGTTCGGTTTGTG+CGG - chr3_3:6133747-6133766 None:intergenic 45.0%
!! CAATGCGGTTTGGATTGGTT+CGG - chr3_3:6133756-6133775 None:intergenic 45.0%
! CAAACCAATGCGGTTTGGAT+TGG - chr3_3:6133761-6133780 None:intergenic 45.0%
!! CAATCCAAACCGCATTGGTT+TGG + chr3_3:6133759-6133778 Msa0439770:intron 45.0%
CAAACCAAACCAATGCGGTT+TGG - chr3_3:6133766-6133785 None:intergenic 45.0%
!! CAAACCGCATTGGTTTGGTT+TGG + chr3_3:6133764-6133783 Msa0439770:intron 45.0%
!! CGCATTGGTTTGGTTTGGTT+TGG + chr3_3:6133769-6133788 Msa0439770:intron 45.0%
! CCGCGAGATAAAAAAGCATG+CGG - chr3_3:6133829-6133848 None:intergenic 45.0%
!!! CCGCATGCTTTTTTATCTCG+CGG + chr3_3:6133826-6133845 Msa0439770:intron 45.0%
!! ATACTAGTTAGGGGTGTTCG+CGG - chr3_3:6133891-6133910 None:intergenic 45.0%
GACATGTGTTTGTAGGTGGT+AGG - chr3_3:6133922-6133941 None:intergenic 45.0%
GCAGGGACTATTTGTGCTAA+CGG - chr3_3:6134290-6134309 None:intergenic 45.0%
! AGCAATCCGTTTGGTGATTG+GGG - chr3_3:6134324-6134343 None:intergenic 45.0%
! CAGCAATCCGTTTGGTGATT+GGG - chr3_3:6134325-6134344 None:intergenic 45.0%
! TCAGCAATCCGTTTGGTGAT+TGG - chr3_3:6134326-6134345 None:intergenic 45.0%
!! ATGGATTGGGCCAAACGAAA+TGG + chr3_3:6134382-6134401 Msa0439770:intron 45.0%
! TGGATTGGGCCAAACGAAAT+GGG + chr3_3:6134383-6134402 Msa0439770:intron 45.0%
!! AATGGGTTAGATCCATGGGT+CGG - chr3_3:6134418-6134437 None:intergenic 45.0%
GTGACTAGGAAACATGCAAG+AGG - chr3_3:6134754-6134773 None:intergenic 45.0%
! TAAAGATGTGTTGGCCCCTA+AGG - chr3_3:6134967-6134986 None:intergenic 45.0%
TTGAAGGTTAAGGAGGAGAG+TGG + chr3_3:6135006-6135025 Msa0439770:intron 45.0%
CAAGTACCAAAACCCAGTTC+GGG - chr3_3:6135097-6135116 None:intergenic 45.0%
CCAAGTACCAAAACCCAGTT+CGG - chr3_3:6135098-6135117 None:intergenic 45.0%
!! ACTGGGTTTTGGTACTTGGA+TGG + chr3_3:6135099-6135118 Msa0439770:intron 45.0%
TTCTTAACGAGATGCTGACG+TGG - chr3_3:6135328-6135347 None:intergenic 45.0%
CTCGTTAAGAAATTGACGGC+AGG + chr3_3:6135337-6135356 Msa0439770:intron 45.0%
TTCTTAACGAGATGCTGACG+TGG - chr3_3:6135328-6135347 None:intergenic 45.0%
CTCGTTAAGAAATTGACGGC+AGG + chr3_3:6135337-6135356 Msa0439770:intron 45.0%
! CACACCATTTTGTCAGTGTG+CGG - chr3_3:6136020-6136039 None:intergenic 45.0%
TTTGTTGAACGCTTGCGCAA+AGG + chr3_3:6136041-6136060 Msa0439770:intron 45.0%
ATGTTGGTCATGAGCTATCC+CGG - chr3_3:6136246-6136265 None:intergenic 45.0%
GAGTTCGATCTGATCCATGT+TGG - chr3_3:6136262-6136281 None:intergenic 45.0%
! AGGAGAGAGAAGTATGTCGA+GGG + chr3_3:6136597-6136616 Msa0439770:intron 45.0%
ACTTTAGTCCCTGAATCGGA+AGG + chr3_3:6136734-6136753 Msa0439770:intron 45.0%
CTTTAGTCCCTGAATCGGAA+GGG + chr3_3:6136735-6136754 Msa0439770:intron 45.0%
TCCCTGAAATTGACCATGCA+GGG + chr3_3:6136897-6136916 Msa0439770:intron 45.0%
TCCCTGCATGGTCAATTTCA+GGG - chr3_3:6136901-6136920 None:intergenic 45.0%
ATTGCAAAACAGTCCCTGCA+TGG - chr3_3:6136913-6136932 None:intergenic 45.0%
! CGACATACAATTTAGGACGG+AGG - chr3_3:6137030-6137049 None:intergenic 45.0%
AGCAGAATCAGTGACAATGG+GGG - chr3_3:6137939-6137958 None:intergenic 45.0%
GAGCAGAATCAGTGACAATG+GGG - chr3_3:6137940-6137959 None:intergenic 45.0%
GGAGCAGAATCAGTGACAAT+GGG - chr3_3:6137941-6137960 None:intergenic 45.0%
GCTTATGAGTATGCTAGACG+AGG + chr3_3:6138449-6138468 Msa0439770:CDS 45.0%
TCTAGTAGCAGTGGCTGATA+TGG + chr3_3:6138508-6138527 Msa0439770:CDS 45.0%
TATTGGTGCAGATGTGACCA+AGG + chr3_3:6138562-6138581 Msa0439770:CDS 45.0%
GTTTCATGCAGTGGATCATC+TGG + chr3_3:6138705-6138724 Msa0439770:intron 45.0%
CTGGAATTATTGGGGTTCCA+AGG + chr3_3:6138737-6138756 Msa0439770:CDS 45.0%
CATGGTCGTTGTTGCAAAAG+TGG + chr3_3:6139215-6139234 Msa0439770:intron 45.0%
ATAGTCGTTGCTTCAGCTTG+TGG + chr3_3:6139354-6139373 Msa0439770:CDS 45.0%
TCAAAACAGACCTGGCATTC+AGG + chr3_3:6139640-6139659 Msa0439770:CDS 45.0%
CAAAACAGACCTGGCATTCA+GGG + chr3_3:6139641-6139660 Msa0439770:CDS 45.0%
CATTGAAGATGAGGCTACTC+TGG + chr3_3:6139665-6139684 Msa0439770:CDS 45.0%
! TACTCTGGGAAGACTTCCAT+TGG + chr3_3:6139680-6139699 Msa0439770:CDS 45.0%
! ACTCTGGGAAGACTTCCATT+GGG + chr3_3:6139681-6139700 Msa0439770:CDS 45.0%
TGTGCCAAGGACATAGTGAA+AGG + chr3_3:6139717-6139736 Msa0439770:CDS 45.0%
TGCACCTTTCACTATGTCCT+TGG - chr3_3:6139724-6139743 None:intergenic 45.0%
! ACATAGTGAAAGGTGCATGC+AGG + chr3_3:6139727-6139746 Msa0439770:CDS 45.0%
! CATAGTGAAAGGTGCATGCA+GGG + chr3_3:6139728-6139747 Msa0439770:CDS 45.0%
! ATAGTGAAAGGTGCATGCAG+GGG + chr3_3:6139729-6139748 Msa0439770:CDS 45.0%
TGTGGTGAAAAGAGGAGGAT+TGG - chr3_3:6140241-6140260 None:intergenic 45.0%
!! AAGAAATTTAATTATAAAAA+TGG + chr3_3:6129455-6129474 Msa0439770:intron 5.0%
!!! TTATTAATCTTTTTAAAAAA+TGG + chr3_3:6131855-6131874 Msa0439770:intron 5.0%
!!! ATTTTTTTAGTATTTTTTTT+AGG - chr3_3:6132009-6132028 None:intergenic 5.0%
!! CAAAAATTTATATAAAATTT+AGG - chr3_3:6132911-6132930 None:intergenic 5.0%
!! GTTAAATATTTATTATAAAT+AGG + chr3_3:6137424-6137443 Msa0439770:intron 5.0%
ATGGAGGAGCTACTAGGTTC+AGG - chr3_3:6127866-6127885 None:intergenic 50.0%
AGGTGAATGGAGGAGCTACT+AGG - chr3_3:6127872-6127891 None:intergenic 50.0%
ACTGGTGCTTCCTCTGGTAT+TGG + chr3_3:6127999-6128018 Msa0439770:CDS 50.0%
! TGCTTCCTCTGGTATTGGAG+AGG + chr3_3:6128004-6128023 Msa0439770:CDS 50.0%
CACCAATTGGAGACCTCTCA+TGG + chr3_3:6128456-6128475 Msa0439770:CDS 50.0%
GTTGAAGTTGGAGCAGACGT+AGG + chr3_3:6128860-6128879 Msa0439770:CDS 50.0%
TGAAGTGAGTGCAACTCCAG+TGG + chr3_3:6129088-6129107 Msa0439770:CDS 50.0%
GAAGTGAGTGCAACTCCAGT+GGG + chr3_3:6129089-6129108 Msa0439770:CDS 50.0%
CATTCACTCACTGATCCCAC+TGG - chr3_3:6129107-6129126 None:intergenic 50.0%
GGTATTTGACTGCACCAGCA+TGG + chr3_3:6129165-6129184 Msa0439770:CDS 50.0%
TTGCTAGGTGCTTCTCTTGC+TGG - chr3_3:6129281-6129300 None:intergenic 50.0%
TTGCTAGAAGCCACCCATGA+AGG - chr3_3:6130485-6130504 None:intergenic 50.0%
TGGATGCCAAGTGGACAAAG+TGG - chr3_3:6132719-6132738 None:intergenic 50.0%
TTGTCCACTTGGCATCCACA+TGG + chr3_3:6131440-6131459 Msa0439770:intron 50.0%
AATGCCATGTGGATGCCAAG+TGG - chr3_3:6132710-6132729 None:intergenic 50.0%
!! ACTGTGCCACTTTGTCCACT+TGG + chr3_3:6131738-6131757 Msa0439770:intron 50.0%
TGGATGCCAAGTGGACAAAG+TGG - chr3_3:6132719-6132738 None:intergenic 50.0%
TTGTCCACTTGGCATCCACA+TGG + chr3_3:6131440-6131459 Msa0439770:intron 50.0%
AATGCCATGTGGATGCCAAG+TGG - chr3_3:6132710-6132729 None:intergenic 50.0%
GTAGATGCAGACCTGGGAAT+TGG - chr3_3:6131961-6131980 None:intergenic 50.0%
AGGGTTGTAGATGCAGACCT+GGG - chr3_3:6131967-6131986 None:intergenic 50.0%
AAGGGTTGTAGATGCAGACC+TGG - chr3_3:6131968-6131987 None:intergenic 50.0%
GAAGCTAAAGAATGCGGTGG+TGG - chr3_3:6132116-6132135 None:intergenic 50.0%
!! CAGCTCCGGTGATGGTTTTA+TGG + chr3_3:6132191-6132210 Msa0439770:intron 50.0%
!!! CCGGTGATGGTTTTATGGGA+AGG + chr3_3:6132196-6132215 Msa0439770:intron 50.0%
CGCTACTTATGAAGGGATCG+TGG + chr3_3:6132225-6132244 Msa0439770:intron 50.0%
TCCGACGAACAGTAATGCTC+TGG - chr3_3:6132277-6132296 None:intergenic 50.0%
! AGAGCATTACTGTTCGTCGG+AGG + chr3_3:6132276-6132295 Msa0439770:intron 50.0%
!! CGAGACAAGATGGTGGATTG+AGG + chr3_3:6132302-6132321 Msa0439770:intron 50.0%
!! GACAAGATGGTGGATTGAGG+CGG + chr3_3:6132305-6132324 Msa0439770:intron 50.0%
TGTTGGACAGAACCAGATCC+GGG - chr3_3:6132338-6132357 None:intergenic 50.0%
GTGTTGGACAGAACCAGATC+CGG - chr3_3:6132339-6132358 None:intergenic 50.0%
GGACACGACGTTCATTGTGT+TGG - chr3_3:6132355-6132374 None:intergenic 50.0%
AAGATCTAGGCTTACTCCGG+CGG - chr3_3:6132379-6132398 None:intergenic 50.0%
AATGCCATGTGGATGCCAAG+TGG + chr3_3:6132710-6132729 Msa0439770:intron 50.0%
TTGTCCACTTGGCATCCACA+TGG - chr3_3:6131440-6131459 None:intergenic 50.0%
TGGATGCCAAGTGGACAAAG+TGG + chr3_3:6132719-6132738 Msa0439770:intron 50.0%
!! GTTGTGCCACTTTGTCCACT+TGG - chr3_3:6132728-6132747 None:intergenic 50.0%
! GACTTTTGCATTGAACCGCG+CGG + chr3_3:6133336-6133355 Msa0439770:intron 50.0%
CGAACCAATCCAAACCGCAT+TGG + chr3_3:6133754-6133773 Msa0439770:intron 50.0%
!! GCATGCGGTTTGGTTTGGTT+CGG - chr3_3:6133814-6133833 None:intergenic 50.0%
TAATCAGTGCCGTCTACGGT+AGG - chr3_3:6134017-6134036 None:intergenic 50.0%
!! CACCAAACGGATTGCTGACA+TGG + chr3_3:6134328-6134347 Msa0439770:intron 50.0%
TGCCATGTCAGCAATCCGTT+TGG - chr3_3:6134333-6134352 None:intergenic 50.0%
!! ATGGGTTAGATCCATGGGTC+GGG - chr3_3:6134417-6134436 None:intergenic 50.0%
AGATTGCGCAAGGAGGAAGA+AGG - chr3_3:6134512-6134531 None:intergenic 50.0%
GAAAGGTGAGAGATTGCGCA+AGG - chr3_3:6134522-6134541 None:intergenic 50.0%
GAAGAAGAGAGAAGGCAAGG+AGG - chr3_3:6134562-6134581 None:intergenic 50.0%
CTCGGCCACCATAGATGAAA+AGG - chr3_3:6134833-6134852 None:intergenic 50.0%
AGGGGCCAACACATCTTTAG+AGG + chr3_3:6134968-6134987 Msa0439770:intron 50.0%
!! CCGAACTGGGTTTTGGTACT+TGG + chr3_3:6135095-6135114 Msa0439770:intron 50.0%
!!! GTTTTGTTTGGCATGGCAGC+AGG - chr3_3:6135672-6135691 None:intergenic 50.0%
AGCTCCGCACACTGACAAAA+TGG + chr3_3:6136013-6136032 Msa0439770:intron 50.0%
CTTGCGCAAAGGACATGTCT+TGG + chr3_3:6136052-6136071 Msa0439770:intron 50.0%
TACAGACTACACGCAGACCA+AGG - chr3_3:6136102-6136121 None:intergenic 50.0%
GGGATAGCTCATGACCAACA+TGG + chr3_3:6136245-6136264 Msa0439770:intron 50.0%
! GAGGAGAGAGAAGTATGTCG+AGG + chr3_3:6136596-6136615 Msa0439770:intron 50.0%
GACGAATCCCTTCCGATTCA+GGG - chr3_3:6136745-6136764 None:intergenic 50.0%
TGACGAATCCCTTCCGATTC+AGG - chr3_3:6136746-6136765 None:intergenic 50.0%
GTCCCTGAAATTGACCATGC+AGG + chr3_3:6136896-6136915 Msa0439770:intron 50.0%
GTCCCTGCATGGTCAATTTC+AGG - chr3_3:6136902-6136921 None:intergenic 50.0%
GGCGAATCTTCTCCCATTCA+TGG + chr3_3:6136957-6136976 Msa0439770:intron 50.0%
GGGAGCAGAATCAGTGACAA+TGG - chr3_3:6137942-6137961 None:intergenic 50.0%
CTAATCACTGGAGCAGCTTC+TGG + chr3_3:6138050-6138069 Msa0439770:CDS 50.0%
!! ACTGGAGCAGCTTCTGGAAT+TGG + chr3_3:6138056-6138075 Msa0439770:CDS 50.0%
AGTATGCTAGACGAGGAGCA+AGG + chr3_3:6138456-6138475 Msa0439770:CDS 50.0%
TAGCAGTGGCTGATATGGCA+AGG + chr3_3:6138513-6138532 Msa0439770:CDS 50.0%
GCTGATATGGCAAGGTCTCT+TGG + chr3_3:6138521-6138540 Msa0439770:CDS 50.0%
GCGCTTACTGTCTTCAACCT+TGG - chr3_3:6138582-6138601 None:intergenic 50.0%
GTCACGCACATCGTTCAAAG+TGG - chr3_3:6138625-6138644 None:intergenic 50.0%
TCGTTGCTTCAGCTTGTGGA+TGG + chr3_3:6139358-6139377 Msa0439770:CDS 50.0%
GGCATAACAATTGCCACACC+TGG + chr3_3:6139612-6139631 Msa0439770:CDS 50.0%
CTTCAATGACCCTGAATGCC+AGG - chr3_3:6139653-6139672 None:intergenic 50.0%
TGGACCCAACGACACATCTT+TGG + chr3_3:6139828-6139847 Msa0439770:CDS 50.0%
GGACCCAACGACACATCTTT+GGG + chr3_3:6139829-6139848 Msa0439770:CDS 50.0%
GGTGAAAAGAGGAGGATTGG+TGG - chr3_3:6140238-6140257 None:intergenic 50.0%
CCATAGCTGCCTTGCAAATG+AGG - chr3_3:6140396-6140415 None:intergenic 50.0%
CCTCATTTGCAAGGCAGCTA+TGG + chr3_3:6140393-6140412 Msa0439770:three_prime_UTR 50.0%
CACATCACTGGTGCTTCCTC+TGG + chr3_3:6127993-6128012 Msa0439770:CDS 55.0%
!! CCTCTGCTGTTTCTGAGGTG+TGG - chr3_3:6128612-6128631 None:intergenic 55.0%
CCACACCTCAGAAACAGCAG+AGG + chr3_3:6128609-6128628 Msa0439770:CDS 55.0%
!! TGCTGCTTTGCTTGCCTGCA+GGG - chr3_3:6128813-6128832 None:intergenic 55.0%
!! ATGCTGCTTTGCTTGCCTGC+AGG - chr3_3:6128814-6128833 None:intergenic 55.0%
! ACGCCCATTTTGCCTTCTGG+TGG - chr3_3:6128947-6128966 None:intergenic 55.0%
ACCAGAAGGCAAAATGGGCG+TGG + chr3_3:6128946-6128965 Msa0439770:CDS 55.0%
! TCCACGCCCATTTTGCCTTC+TGG - chr3_3:6128950-6128969 None:intergenic 55.0%
TAGATAGGCCAGGTCAGACG+AGG - chr3_3:6130257-6130276 None:intergenic 55.0%
!! ACAATGGTGCCGTCTACGGT+AGG + chr3_3:6130859-6130878 Msa0439770:intron 55.0%
TTGCCCTCTCCTACCGTAGA+CGG - chr3_3:6134005-6134024 None:intergenic 55.0%
CTACGGTAGGAGAGGGCAAT+AGG + chr3_3:6130872-6130891 Msa0439770:intron 55.0%
!! GCTGTGCCACTTTGTCCACT+TGG + chr3_3:6131429-6131448 Msa0439770:intron 55.0%
!! CGAGTTTGGGTTTTGGTCCC+TGG - chr3_3:6131605-6131624 None:intergenic 55.0%
!! CGAGTTTGGGTTTTGGTCCC+TGG + chr3_3:6131605-6131624 Msa0439770:intron 55.0%
AACAGCGTCACCATGGGAAG+AGG + chr3_3:6132140-6132159 Msa0439770:intron 55.0%
GTCGCATCTTCCTCTTCCCA+TGG - chr3_3:6132153-6132172 None:intergenic 55.0%
GCATTACTGTTCGTCGGAGG+TGG + chr3_3:6132279-6132298 Msa0439770:intron 55.0%
!! CGAGTTTGGGTTTTGGTCCC+TGG - chr3_3:6131605-6131624 None:intergenic 55.0%
TTGCATTGAACCGCGCGGTT+TGG + chr3_3:6133341-6133360 Msa0439770:intron 55.0%
!! TTGAACCGCGCGGTTTGGTT+CGG + chr3_3:6133346-6133365 Msa0439770:intron 55.0%
!! GTTCGCGGTGCGATTTGGTT+CGG - chr3_3:6133876-6133895 None:intergenic 55.0%
CTACGGTAGGAGAGGGCAAT+AGG - chr3_3:6130872-6130891 None:intergenic 55.0%
TTGCCCTCTCCTACCGTAGA+CGG + chr3_3:6134005-6134024 Msa0439770:intron 55.0%
GGGTAAAATGACCCGACCCA+TGG + chr3_3:6134403-6134422 Msa0439770:intron 55.0%
AGGTGAGAGATTGCGCAAGG+AGG - chr3_3:6134519-6134538 None:intergenic 55.0%
GGGGAAGAAGAGAGAAGGCA+AGG - chr3_3:6134565-6134584 None:intergenic 55.0%
! TAAGGTGCTCGAACCCGAAC+TGG + chr3_3:6135081-6135100 Msa0439770:intron 55.0%
! AAGGTGCTCGAACCCGAACT+GGG + chr3_3:6135082-6135101 Msa0439770:intron 55.0%
! CTCGAACCCGAACTGGGTTT+TGG + chr3_3:6135088-6135107 Msa0439770:intron 55.0%
ATGCTGACGTGGCACCAAGT+GGG - chr3_3:6135317-6135336 None:intergenic 55.0%
ATGCTGACGTGGCACCAAGT+GGG - chr3_3:6135317-6135336 None:intergenic 55.0%
GTAGCCATACCAGATCGGGT+CGG + chr3_3:6136333-6136352 Msa0439770:intron 55.0%
CATACCAGATCGGGTCGGAT+CGG + chr3_3:6136338-6136357 Msa0439770:intron 55.0%
!! AGCAGCTTCTGGAATTGGCG+AGG + chr3_3:6138061-6138080 Msa0439770:CDS 55.0%
!! TGGGGTTCCAAGGTTGGTAG+AGG + chr3_3:6138747-6138766 Msa0439770:CDS 55.0%
!! GAAGGTGCTTTATCCCCACC+TGG + chr3_3:6139800-6139819 Msa0439770:CDS 55.0%
! TTTATCCCCACCTGGTGGAC+TGG + chr3_3:6139808-6139827 Msa0439770:CDS 55.0%
CTTGGATGCCTGCACCCAGA+AGG + chr3_3:6128661-6128680 Msa0439770:CDS 60.0%
GTGCCGTCTACGGTAGGAGA+GGG + chr3_3:6130865-6130884 Msa0439770:intron 60.0%
GGCAATAGGTCCCCTACCGT+AGG + chr3_3:6130886-6130905 Msa0439770:intron 60.0%
TCGGAGGTGGCGAGACAAGA+TGG + chr3_3:6132292-6132311 Msa0439770:intron 60.0%
GAGGTGGCGAGACAAGATGG+TGG + chr3_3:6132295-6132314 Msa0439770:intron 60.0%
GATTGAGGCGGCGTCAAACC+CGG + chr3_3:6132317-6132336 Msa0439770:intron 60.0%
ATCTAGGCTTACTCCGGCGG+CGG - chr3_3:6132376-6132395 None:intergenic 60.0%
GCAAACCGAACCAAACCGCG+CGG - chr3_3:6133354-6133373 None:intergenic 60.0%
!! GCGCGGTTTGGTTCGGTTTG+CGG + chr3_3:6133353-6133372 Msa0439770:intron 60.0%
GGCAATAGGTCCCCTACCGT+AGG - chr3_3:6130886-6130905 None:intergenic 60.0%
GTGCCGTCTACGGTAGGAGA+GGG - chr3_3:6130865-6130884 None:intergenic 60.0%
AGTGCCGTCTACGGTAGGAG+AGG - chr3_3:6134012-6134031 None:intergenic 60.0%
GATGCTGACGTGGCACCAAG+TGG - chr3_3:6135318-6135337 None:intergenic 60.0%
GATGCTGACGTGGCACCAAG+TGG - chr3_3:6135318-6135337 None:intergenic 60.0%
CGATCCGACCCGATCTGGTA+TGG - chr3_3:6136340-6136359 None:intergenic 60.0%
TAGACCGATCCGACCCGATC+TGG - chr3_3:6136345-6136364 None:intergenic 60.0%
!! GGACGGAGGGAGTACTCTAC+TGG - chr3_3:6137016-6137035 None:intergenic 60.0%
! AACTTCTGGGGAGCAGCTCG+TGG + chr3_3:6139285-6139304 Msa0439770:CDS 60.0%
GGTGCTTTATCCCCACCTGG+TGG + chr3_3:6139803-6139822 Msa0439770:CDS 60.0%
TTGGGTCCAGTCCACCAGGT+GGG - chr3_3:6139817-6139836 None:intergenic 60.0%
! GGTGCCGTCTACGGTAGGAG+AGG + chr3_3:6130864-6130883 Msa0439770:intron 65.0%
GAGGAAGATGCGACCGTCGC+CGG + chr3_3:6132159-6132178 Msa0439770:intron 65.0%
ACCGGAGCTGTCCACGACTC+CGG - chr3_3:6132181-6132200 None:intergenic 65.0%
GTCGTGGACAGCTCCGGTGA+TGG + chr3_3:6132183-6132202 Msa0439770:intron 65.0%
ATGAACGTCGTGTCCGCCGC+CGG + chr3_3:6132360-6132379 Msa0439770:intron 65.0%
! GGGGTGTTCGCGGTGCGATT+TGG - chr3_3:6133881-6133900 None:intergenic 65.0%
TGGGTCCAGTCCACCAGGTG+GGG - chr3_3:6139816-6139835 None:intergenic 65.0%
GTTGGGTCCAGTCCACCAGG+TGG - chr3_3:6139818-6139837 None:intergenic 65.0%
GTCGTTGGGTCCAGTCCACC+AGG - chr3_3:6139821-6139840 None:intergenic 65.0%
GCTGTCCACGACTCCGGCGA+CGG - chr3_3:6132175-6132194 None:intergenic 70.0%
GCCGGAGTCGTGGACAGCTC+CGG + chr3_3:6132177-6132196 Msa0439770:intron 70.0%
GGCGGCGTCAAACCCGGATC+TGG + chr3_3:6132323-6132342 Msa0439770:intron 70.0%
TGCGACCGTCGCCGGAGTCG+TGG + chr3_3:6132167-6132186 Msa0439770:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 6127843 6140448 6127843 ID=Msa0439770;Name=Msa0439770
chr3_3 mRNA 6127843 6140448 6127843 ID=Msa0439770-mRNA-1;Parent=Msa0439770;Name=Msa0439770-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0.3|0.27|1|0.9|0.81|11|522|609
chr3_3 exon 6127843 6128025 6127843 ID=Msa0439770-mRNA-1:exon:1234;Parent=Msa0439770-mRNA-1
chr3_3 exon 6128105 6128297 6128105 ID=Msa0439770-mRNA-1:exon:1235;Parent=Msa0439770-mRNA-1
chr3_3 exon 6128392 6128477 6128392 ID=Msa0439770-mRNA-1:exon:1236;Parent=Msa0439770-mRNA-1
chr3_3 exon 6128564 6128695 6128564 ID=Msa0439770-mRNA-1:exon:1237;Parent=Msa0439770-mRNA-1
chr3_3 exon 6128818 6128985 6128818 ID=Msa0439770-mRNA-1:exon:1238;Parent=Msa0439770-mRNA-1
chr3_3 exon 6129086 6129333 6129086 ID=Msa0439770-mRNA-1:exon:1239;Parent=Msa0439770-mRNA-1
chr3_3 exon 6138013 6138082 6138013 ID=Msa0439770-mRNA-1:exon:1240;Parent=Msa0439770-mRNA-1
chr3_3 exon 6138443 6138593 6138443 ID=Msa0439770-mRNA-1:exon:1241;Parent=Msa0439770-mRNA-1
chr3_3 exon 6138716 6138804 6138716 ID=Msa0439770-mRNA-1:exon:1242;Parent=Msa0439770-mRNA-1
chr3_3 exon 6139279 6139410 6139279 ID=Msa0439770-mRNA-1:exon:1243;Parent=Msa0439770-mRNA-1
chr3_3 exon 6139549 6140448 6139549 ID=Msa0439770-mRNA-1:exon:1244;Parent=Msa0439770-mRNA-1
chr3_3 CDS 6127843 6128025 6127843 ID=Msa0439770-mRNA-1:cds;Parent=Msa0439770-mRNA-1
chr3_3 CDS 6128105 6128297 6128105 ID=Msa0439770-mRNA-1:cds;Parent=Msa0439770-mRNA-1
chr3_3 CDS 6128392 6128477 6128392 ID=Msa0439770-mRNA-1:cds;Parent=Msa0439770-mRNA-1
chr3_3 CDS 6128564 6128695 6128564 ID=Msa0439770-mRNA-1:cds;Parent=Msa0439770-mRNA-1
chr3_3 CDS 6128818 6128985 6128818 ID=Msa0439770-mRNA-1:cds;Parent=Msa0439770-mRNA-1
chr3_3 CDS 6129086 6129333 6129086 ID=Msa0439770-mRNA-1:cds;Parent=Msa0439770-mRNA-1
chr3_3 CDS 6138013 6138082 6138013 ID=Msa0439770-mRNA-1:cds;Parent=Msa0439770-mRNA-1
chr3_3 CDS 6138443 6138593 6138443 ID=Msa0439770-mRNA-1:cds;Parent=Msa0439770-mRNA-1
chr3_3 CDS 6138716 6138804 6138716 ID=Msa0439770-mRNA-1:cds;Parent=Msa0439770-mRNA-1
chr3_3 CDS 6139279 6139410 6139279 ID=Msa0439770-mRNA-1:cds;Parent=Msa0439770-mRNA-1
chr3_3 CDS 6139549 6139926 6139549 ID=Msa0439770-mRNA-1:cds;Parent=Msa0439770-mRNA-1
chr3_3 three_prime_UTR 6139927 6140448 6139927 ID=Msa0439770-mRNA-1:three_prime_utr;Parent=Msa0439770-mRNA-1
Gene Sequence

>Msa0439770

ATGGACCTTATTCATAAGTTCCTGAACCTAGTAGCTCCTCCATTCACCTTCTTTTCCTTACTCCTTTTCTTACCACCATATTGGACCTTCAAATTCTTCCTTTCCATTATCTTTACATTCTTCCCTGAAAATGTTGCTGGTAAAGTTGTTCACATCACTGGTGCTTCCTCTGGTATTGGAGAGCATTTGGCTTACGAGTATGCTAAGAGAGGTGCACGCTTAGCACTTTCTGCTAGAAGAGATACAGCACTCCGTGAAGTTGCTGATAGAGCTCGTGATTTTGGTTCTCCTGATGTTATTATAATGCGTGCAGATGTTTCTAAAGTTGATGATTGTAGGCGTTTGGTCGATGAAACCGTTAACCATTTTGGTAGACTGGATCATTTGGTAAACAATGCTGCAATCAGTGCTGCCATGATGTTTGAAGATGTAACTGATATCACCAATTGGAGACCTCTCATGGACACAAACTTTTGGGGATCAGTTTACACAACCCGTTTTGCTTTACCACACCTCAGAAACAGCAGAGGCAAAATTGTGGTCCTTTCATCAATTGATTCTTGGATGCCTGCACCCAGAAGGAGTATATATAATGCAAGCAAAGCAGCATTAGTAAGTCTTTATGAAACATTGAGGGTTGAAGTTGGAGCAGACGTAGGTGTAACAATTGTTACACCAGGTTACATAGAATCTGAATTAACCAAAGGCAAAGTCTTATTGCCACCAGAAGGCAAAATGGGCGTGGACCAAGATATGAGAGATGTTGAAGTGAGTGCAACTCCAGTGGGATCAGTGAGTGAATGTGCAAAATCAATAGTGAATGGTACATTGAGGGGAGATAGGTATTTGACTGCACCAGCATGGTTTAGAATGACATATGTTGTGAAAGTGTTGTGTCCAGAATTGTTGGAGTGGGGTTTCAGAATGTTGTACTTGACTAGATCAAGTAATACTCCAGCAAGAGAAGCACCTAGCAAAAAGATTTTGGATGCTACTGGAATCAAAAACGTGTTGGTGCGAACAGAAAATATGGCAAGAAAAGTTGTACTAATCACTGGAGCAGCTTCTGGAATTGGCGAGCAACTAGCTTATGAGTATGCTAGACGAGGAGCAAGGTTGTCACTTGTTGACATTAAAATGGAGAATCTAGTAGCAGTGGCTGATATGGCAAGGTCTCTTGGTTCCCCTGATGTTATCATTATTGGTGCAGATGTGACCAAGGTTGAAGACATGGATCATCTGGTAAATAATGCTGGAATTATTGGGGTTCCAAGGTTGGTAGAGGATTTTTCGGATTTGTCTAAATACACACAAATTATGGAAACAAACTTCTGGGGAGCAGCTCGTGGCACTTTATATGCAATCCAACATCTTAAAAATAGTAAAGGCAGGATCATAGTCGTTGCTTCAGCTTGTGGATGGTTTCCAATTCCGAGACTCAGTATCTATAACGCTAGTAAGGCAGCGATAATAAGCTTCTTTGAGACTTTAAGAATTGAACTTGGTTGGTCTATTGGCATAACAATTGCCACACCTGGTTTTATCAAAACAGACCTGGCATTCAGGGTCATTGAAGATGAGGCTACTCTGGGAAGACTTCCATTGGGTTCATCAGTTGAATGTGCCAAGGACATAGTGAAAGGTGCATGCAGGGGAGATATGTATGTGACAAACCCTTCATGGGTCAAAGTAATATTTTATTGGAAGGTGCTTTATCCCCACCTGGTGGACTGGACCCAACGACACATCTTTGGGATTTTGACAAACCCTTACCGGAAGAATGATAATCTGCTTATCTCCAAGAGTTACCAAGAGCTTAAGGTAGAATAA
Protein sequence

>Msa0439770

MDLIHKFLNLVAPPFTFFSLLLFLPPYWTFKFFLSIIFTFFPENVAGKVVHITGASSGIGEHLAYEYAKRGARLALSARRDTALREVADRARDFGSPDVIIMRADVSKVDDCRRLVDETVNHFGRLDHLVNNAAISAAMMFEDVTDITNWRPLMDTNFWGSVYTTRFALPHLRNSRGKIVVLSSIDSWMPAPRRSIYNASKAALVSLYETLRVEVGADVGVTIVTPGYIESELTKGKVLLPPEGKMGVDQDMRDVEVSATPVGSVSECAKSIVNGTLRGDRYLTAPAWFRMTYVVKVLCPELLEWGFRMLYLTRSSNTPAREAPSKKILDATGIKNVLVRTENMARKVVLITGAASGIGEQLAYEYARRGARLSLVDIKMENLVAVADMARSLGSPDVIIIGADVTKVEDMDHLVNNAGIIGVPRLVEDFSDLSKYTQIMETNFWGAARGTLYAIQHLKNSKGRIIVVASACGWFPIPRLSIYNASKAAIISFFETLRIELGWSIGITIATPGFIKTDLAFRVIEDEATLGRLPLGSSVECAKDIVKGACRGDMYVTNPSWVKVIFYWKVLYPHLVDWTQRHIFGILTNPYRKNDNLLISKSYQELKVE*