Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083920 | XP_013469374.1 | 99.057 | 530 | 5 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1090 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083920 | sp|Q9LZR3|CSLA9_ARATH | 76.608 | 513 | 117 | 3 | 17 | 528 | 21 | 531 | 0.0 | 832 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083920 | A0A072VNP9 | 99.057 | 530 | 5 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1090 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005050 | Msa0083920 | 0.812106 | 5.010004e-51 | -8.615850e-47 |
| Msa0035810 | Msa0083920 | 0.910471 | 1.804980e-82 | -8.615850e-47 |
| Msa0036010 | Msa0083920 | 0.879760 | 9.577177e-70 | -8.615850e-47 |
| Msa0036430 | Msa0083920 | 0.826210 | 3.073289e-54 | -8.615850e-47 |
| Msa0053110 | Msa0083920 | 0.828183 | 1.035943e-54 | -8.615850e-47 |
| Msa0073670 | Msa0083920 | 0.841762 | 3.902414e-58 | -8.615850e-47 |
| Msa0076040 | Msa0083920 | 0.811964 | 5.378090e-51 | -8.615850e-47 |
| Msa0083920 | Msa0084500 | 0.811994 | 5.298890e-51 | -8.615850e-47 |
| Msa0083920 | Msa0098440 | 0.820772 | 5.747671e-53 | -8.615850e-47 |
| Msa0083920 | Msa0109950 | 0.809033 | 2.310581e-50 | -8.615850e-47 |
| Msa0083920 | Msa0110970 | 0.800522 | 1.385339e-48 | -8.615850e-47 |
| Msa0083920 | Msa0130010 | 0.810004 | 1.429696e-50 | -8.615850e-47 |
| Msa0083920 | Msa0130240 | 0.837167 | 6.097889e-57 | -8.615850e-47 |
| Msa0083920 | Msa0130570 | 0.804124 | 2.511319e-49 | -8.615850e-47 |
| Msa0083920 | Msa0134130 | 0.836493 | 9.061773e-57 | -8.615850e-47 |
| Msa0083920 | Msa0181610 | 0.804161 | 2.467502e-49 | -8.615850e-47 |
| Msa0083920 | Msa0186890 | 0.816656 | 4.941133e-52 | -8.615850e-47 |
| Msa0083920 | Msa0219190 | 0.857892 | 1.197019e-62 | -8.615850e-47 |
| Msa0083920 | Msa0298240 | 0.869056 | 4.121664e-66 | -8.615850e-47 |
| Msa0083920 | Msa0317280 | 0.802714 | 4.921163e-49 | -8.615850e-47 |
| Msa0083920 | Msa0334040 | 0.803597 | 3.231403e-49 | -8.615850e-47 |
| Msa0083920 | Msa0336090 | 0.864184 | 1.459893e-64 | -8.615850e-47 |
| Msa0083920 | Msa0370600 | 0.807081 | 6.015643e-50 | -8.615850e-47 |
| Msa0083920 | Msa0418200 | 0.805481 | 1.307729e-49 | -8.615850e-47 |
| Msa0083920 | Msa0436500 | 0.800116 | 1.676131e-48 | -8.615850e-47 |
| Msa0083920 | Msa0439770 | 0.803440 | 3.481969e-49 | -8.615850e-47 |
| Msa0083920 | Msa0464540 | 0.801629 | 8.228900e-49 | -8.615850e-47 |
| Msa0083920 | Msa0537920 | 0.822595 | 2.178038e-53 | -8.615850e-47 |
| Msa0083920 | Msa0538220 | 0.833084 | 6.533836e-56 | -8.615850e-47 |
| Msa0083920 | Msa0541860 | 0.815866 | 7.420646e-52 | -8.615850e-47 |
| Msa0083920 | Msa0552810 | 0.823502 | 1.338031e-53 | -8.615850e-47 |
| Msa0083920 | Msa0555910 | 0.801543 | 8.570214e-49 | -8.615850e-47 |
| Msa0083920 | Msa0581070 | 0.821657 | 3.594465e-53 | -8.615850e-47 |
| Msa0083920 | Msa0593190 | 0.811475 | 6.873044e-51 | -8.615850e-47 |
| Msa0083920 | Msa0620260 | 0.818992 | 1.467182e-52 | -8.615850e-47 |
| Msa0083920 | Msa0620990 | 0.805614 | 1.225856e-49 | -8.615850e-47 |
| Msa0083920 | Msa0650090 | 0.802515 | 5.409498e-49 | -8.615850e-47 |
| Msa0083920 | Msa0684500 | 0.800286 | 1.547786e-48 | -8.615850e-47 |
| Msa0083920 | Msa0688500 | 0.834898 | 2.295868e-56 | -8.615850e-47 |
| Msa0083920 | Msa0691410 | 0.803136 | 4.026375e-49 | -8.615850e-47 |
| Msa0083920 | Msa0692080 | 0.805765 | 1.139905e-49 | -8.615850e-47 |
| Msa0083920 | Msa0703230 | 0.816469 | 5.441296e-52 | -8.615850e-47 |
| Msa0083920 | Msa0716800 | 0.819828 | 9.463395e-53 | -8.615850e-47 |
| Msa0083920 | Msa0734960 | 0.800802 | 1.214825e-48 | -8.615850e-47 |
| Msa0083920 | Msa0741900 | 0.852844 | 3.535161e-61 | -8.615850e-47 |
| Msa0083920 | Msa0747780 | 0.827611 | 1.421520e-54 | -8.615850e-47 |
| Msa0083920 | Msa0755340 | 0.800837 | 1.195088e-48 | -8.615850e-47 |
| Msa0083920 | Msa0757870 | 0.830359 | 3.070198e-55 | -8.615850e-47 |
| Msa0083920 | Msa0761580 | 0.832326 | 1.007512e-55 | -8.615850e-47 |
| Msa0083920 | Msa0788770 | 0.801380 | 9.255515e-49 | -8.615850e-47 |
| Msa0083920 | Msa0799210 | 0.806227 | 9.113239e-50 | -8.615850e-47 |
| Msa0083920 | Msa0822990 | 0.831314 | 1.790544e-55 | -8.615850e-47 |
| Msa0083920 | Msa0824640 | 0.800477 | 1.414925e-48 | -8.615850e-47 |
| Msa0083920 | Msa0862100 | 0.845814 | 3.211297e-59 | -8.615850e-47 |
| Msa0083920 | Msa0864010 | 0.808570 | 2.902426e-50 | -8.615850e-47 |
| Msa0083920 | Msa0867350 | 0.813672 | 2.273271e-51 | -8.615850e-47 |
| Msa0083920 | Msa0872310 | 0.855108 | 7.870196e-62 | -8.615850e-47 |
| Msa0083920 | Msa0896970 | 0.805892 | 1.071967e-49 | -8.615850e-47 |
| Msa0083920 | Msa0898730 | 0.814318 | 1.637317e-51 | -8.615850e-47 |
| Msa0083920 | Msa0905550 | 0.842212 | 2.968897e-58 | -8.615850e-47 |
| Msa0083920 | Msa0930780 | 0.830762 | 2.446062e-55 | -8.615850e-47 |
| Msa0083920 | Msa0936340 | 0.822890 | 1.858954e-53 | -8.615850e-47 |
| Msa0083920 | Msa0937550 | 0.860385 | 2.143579e-63 | -8.615850e-47 |
| Msa0083920 | Msa0974750 | 0.813475 | 2.511518e-51 | -8.615850e-47 |
| Msa0083920 | Msa0996080 | 0.804257 | 2.356290e-49 | -8.615850e-47 |
| Msa0083920 | Msa1004420 | 0.803724 | 3.040726e-49 | -8.615850e-47 |
| Msa0083920 | Msa1007350 | 0.815242 | 1.021797e-51 | -8.615850e-47 |
| Msa0083920 | Msa1012810 | 0.800915 | 1.152100e-48 | -8.615850e-47 |
| Msa0083920 | Msa1032450 | 0.836085 | 1.150456e-56 | -8.615850e-47 |
| Msa0083920 | Msa1033560 | 0.807588 | 4.697877e-50 | -8.615850e-47 |
| Msa0083920 | Msa1037900 | 0.809962 | 1.459946e-50 | -8.615850e-47 |
| Msa0083920 | Msa1037910 | 0.802757 | 4.821172e-49 | -8.615850e-47 |
| Msa0083920 | Msa1037920 | 0.848354 | 6.467530e-60 | -8.615850e-47 |
| Msa0083920 | Msa1041530 | 0.839684 | 1.367194e-57 | -8.615850e-47 |
| Msa0083920 | Msa1055010 | 0.802117 | 6.531662e-49 | -8.615850e-47 |
| Msa0083920 | Msa1081570 | 0.831096 | 2.025382e-55 | -8.615850e-47 |
| Msa0083920 | Msa1097640 | 0.826782 | 2.246197e-54 | -8.615850e-47 |
| Msa0083920 | Msa1123880 | 0.832242 | 1.056953e-55 | -8.615850e-47 |
| Msa0083920 | Msa1126510 | 0.806414 | 8.324205e-50 | -8.615850e-47 |
| Msa0083920 | Msa1126770 | 0.800211 | 1.603029e-48 | -8.615850e-47 |
| Msa0083920 | Msa1127140 | 0.840689 | 7.474472e-58 | -8.615850e-47 |
| Msa0083920 | Msa1129960 | 0.820818 | 5.610514e-53 | -8.615850e-47 |
| Msa0083920 | Msa1129970 | 0.828189 | 1.032533e-54 | -8.615850e-47 |
| Msa0083920 | Msa1129980 | 0.833945 | 3.983083e-56 | -8.615850e-47 |
| Msa0083920 | Msa1130760 | 0.800083 | 1.701732e-48 | -8.615850e-47 |
| Msa0083920 | Msa1134110 | 0.802110 | 6.552520e-49 | -8.615850e-47 |
| Msa0083920 | Msa1139810 | 0.826099 | 3.266417e-54 | -8.615850e-47 |
| Msa0083920 | Msa1150970 | 0.803928 | 2.758447e-49 | -8.615850e-47 |
| Msa0083920 | Msa1165870 | 0.802627 | 5.128458e-49 | -8.615850e-47 |
| Msa0083920 | Msa1166400 | 0.845503 | 3.898680e-59 | -8.615850e-47 |
| Msa0083920 | Msa1169990 | 0.836169 | 1.095329e-56 | -8.615850e-47 |
| Msa0083920 | Msa1174530 | 0.800472 | 1.418235e-48 | -8.615850e-47 |
| Msa0083920 | Msa1186830 | 0.819545 | 1.097896e-52 | -8.615850e-47 |
| Msa0083920 | Msa1227220 | 0.819410 | 1.178411e-52 | -8.615850e-47 |
| Msa0083920 | Msa1227690 | 0.808049 | 3.748848e-50 | -8.615850e-47 |
| Msa0083920 | Msa1228890 | 0.832124 | 1.130831e-55 | -8.615850e-47 |
| Msa0083920 | Msa1235250 | 0.806352 | 8.578041e-50 | -8.615850e-47 |
| Msa0083920 | Msa1246470 | 0.808420 | 3.124456e-50 | -8.615850e-47 |
| Msa0083920 | Msa1254710 | 0.802706 | 4.940472e-49 | -8.615850e-47 |
| Msa0083920 | Msa1280560 | 0.806711 | 7.205260e-50 | -8.615850e-47 |
| Msa0083920 | Msa1309130 | 0.804917 | 1.715684e-49 | -8.615850e-47 |
| Msa0083920 | Msa1355400 | 0.805951 | 1.041615e-49 | -8.615850e-47 |
| Msa0083920 | Msa1365150 | 0.812578 | 3.950637e-51 | -8.615850e-47 |
| Msa0083920 | Msa1365200 | 0.812679 | 3.755235e-51 | -8.615850e-47 |
| Msa0083920 | Msa1367880 | 0.820921 | 5.313024e-53 | -8.615850e-47 |
| Msa0083920 | Msa1398860 | 0.804650 | 1.951267e-49 | -8.615850e-47 |
| Msa0083920 | Msa1404210 | 0.811974 | 5.353680e-51 | -8.615850e-47 |
| Msa0083920 | Msa1414930 | 0.807416 | 5.108049e-50 | -8.615850e-47 |
| Msa0083920 | Msa1420060 | 0.868836 | 4.855678e-66 | -8.615850e-47 |
| Msa0083920 | Msa1421550 | 0.807586 | 4.702236e-50 | -8.615850e-47 |
| Msa0083920 | Msa1438640 | 0.805199 | 1.498311e-49 | -8.615850e-47 |
| Msa0083920 | Msa1465080 | 0.800905 | 1.157122e-48 | -8.615850e-47 |
| Msa0083920 | Msa1466990 | 0.819050 | 1.423437e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083920 | MtrunA17_Chr1g0198111 | 99.057 | 530 | 5 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1090 |
| Msa0083920 | MtrunA17_Chr7g0265711 | 76.460 | 531 | 121 | 2 | 1 | 528 | 1 | 530 | 0.0 | 879 |
| Msa0083920 | MtrunA17_Chr1g0179441 | 75.624 | 521 | 126 | 1 | 10 | 530 | 4 | 523 | 0.0 | 857 |
| Msa0083920 | MtrunA17_Chr1g0179421 | 71.785 | 521 | 146 | 1 | 10 | 530 | 4 | 523 | 0.0 | 813 |
| Msa0083920 | MtrunA17_Chr1g0179381 | 70.441 | 521 | 152 | 2 | 10 | 530 | 4 | 522 | 0.0 | 793 |
| Msa0083920 | MtrunA17_Chr4g0027221 | 67.297 | 529 | 159 | 3 | 12 | 527 | 15 | 542 | 0.0 | 760 |
| Msa0083920 | MtrunA17_Chr7g0264621 | 63.529 | 510 | 182 | 3 | 21 | 528 | 21 | 528 | 0.0 | 699 |
| Msa0083920 | MtrunA17_Chr1g0179391 | 76.106 | 339 | 81 | 0 | 139 | 477 | 1 | 339 | 0.0 | 565 |
| Msa0083920 | MtrunA17_Chr3g0135191 | 48.611 | 432 | 216 | 3 | 25 | 455 | 171 | 597 | 2.19e-146 | 436 |
| Msa0083920 | MtrunA17_Chr4g0000581 | 48.190 | 442 | 225 | 2 | 16 | 457 | 162 | 599 | 8.04e-146 | 435 |
| Msa0083920 | MtrunA17_Chr3g0139081 | 47.033 | 455 | 238 | 2 | 25 | 479 | 155 | 606 | 3.89e-144 | 430 |
| Msa0083920 | MtrunA17_Chr6g0451381 | 45.495 | 455 | 239 | 3 | 24 | 477 | 139 | 585 | 1.80e-143 | 428 |
| Msa0083920 | MtrunA17_Chr8g0339101 | 41.588 | 529 | 275 | 5 | 25 | 524 | 175 | 698 | 4.76e-133 | 402 |
| Msa0083920 | MtrunA17_Chr1g0179401 | 63.359 | 131 | 47 | 1 | 10 | 140 | 4 | 133 | 1.57e-52 | 176 |
| Msa0083920 | MtrunA17_Chr4g0064791 | 44.355 | 124 | 63 | 1 | 79 | 196 | 77 | 200 | 5.26e-25 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083920 | AT5G03760.1 | 76.608 | 513 | 117 | 3 | 17 | 528 | 21 | 531 | 0.0 | 832 |
| Msa0083920 | AT5G22740.1 | 71.401 | 521 | 146 | 3 | 10 | 528 | 14 | 533 | 0.0 | 796 |
| Msa0083920 | AT1G23480.1 | 68.605 | 516 | 162 | 0 | 13 | 528 | 39 | 554 | 0.0 | 772 |
| Msa0083920 | AT1G23480.2 | 68.605 | 516 | 162 | 0 | 13 | 528 | 39 | 554 | 0.0 | 772 |
| Msa0083920 | AT1G23480.3 | 70.539 | 482 | 142 | 0 | 47 | 528 | 1 | 482 | 0.0 | 739 |
| Msa0083920 | AT4G13410.1 | 64.833 | 509 | 173 | 2 | 16 | 524 | 34 | 536 | 0.0 | 728 |
| Msa0083920 | AT2G35650.1 | 66.732 | 514 | 167 | 2 | 17 | 530 | 43 | 552 | 0.0 | 726 |
| Msa0083920 | AT5G16190.3 | 67.000 | 500 | 163 | 2 | 25 | 524 | 6 | 503 | 0.0 | 710 |
| Msa0083920 | AT1G24070.1 | 63.168 | 524 | 190 | 3 | 2 | 524 | 30 | 551 | 0.0 | 706 |
| Msa0083920 | AT2G35650.4 | 68.182 | 484 | 150 | 2 | 47 | 530 | 1 | 480 | 0.0 | 698 |
| Msa0083920 | AT2G35650.2 | 68.182 | 484 | 150 | 2 | 47 | 530 | 1 | 480 | 0.0 | 698 |
| Msa0083920 | AT5G16190.4 | 62.852 | 533 | 163 | 3 | 25 | 524 | 6 | 536 | 0.0 | 693 |
| Msa0083920 | AT3G56000.1 | 60.501 | 519 | 199 | 4 | 16 | 530 | 13 | 529 | 0.0 | 667 |
| Msa0083920 | AT5G16190.2 | 70.022 | 447 | 132 | 2 | 25 | 471 | 6 | 450 | 0.0 | 662 |
| Msa0083920 | AT5G16190.1 | 69.231 | 442 | 135 | 1 | 83 | 524 | 2 | 442 | 0.0 | 652 |
| Msa0083920 | AT4G16590.1 | 58.020 | 505 | 176 | 3 | 20 | 524 | 51 | 519 | 0.0 | 620 |
| Msa0083920 | AT1G23480.4 | 70.694 | 389 | 114 | 0 | 140 | 528 | 21 | 409 | 0.0 | 598 |
| Msa0083920 | AT4G13410.3 | 67.105 | 380 | 120 | 1 | 145 | 524 | 1 | 375 | 0.0 | 565 |
| Msa0083920 | AT2G35650.3 | 67.684 | 393 | 124 | 1 | 138 | 530 | 5 | 394 | 0.0 | 561 |
| Msa0083920 | AT4G13410.2 | 64.444 | 360 | 119 | 3 | 16 | 374 | 34 | 385 | 3.04e-176 | 502 |
| Msa0083920 | AT1G24070.2 | 61.039 | 385 | 136 | 4 | 2 | 385 | 30 | 401 | 4.87e-171 | 489 |
| Msa0083920 | AT4G31590.1 | 47.903 | 453 | 228 | 3 | 25 | 472 | 160 | 609 | 1.22e-148 | 442 |
| Msa0083920 | AT2G24630.1 | 49.083 | 436 | 213 | 3 | 25 | 457 | 160 | 589 | 1.56e-148 | 442 |
| Msa0083920 | AT2G24630.2 | 49.083 | 436 | 213 | 3 | 25 | 457 | 160 | 589 | 1.56e-148 | 442 |
| Msa0083920 | AT3G28180.1 | 47.973 | 444 | 222 | 3 | 15 | 457 | 126 | 561 | 2.19e-145 | 434 |
| Msa0083920 | AT3G07330.1 | 41.588 | 529 | 277 | 5 | 25 | 524 | 153 | 678 | 6.46e-141 | 422 |
| Msa0083920 | AT3G07330.2 | 41.588 | 529 | 277 | 5 | 25 | 524 | 153 | 678 | 6.46e-141 | 422 |
| Msa0083920 | AT4G07960.1 | 43.643 | 527 | 265 | 7 | 25 | 524 | 174 | 695 | 5.95e-138 | 415 |
| Msa0083920 | AT4G07960.2 | 43.643 | 527 | 265 | 7 | 25 | 524 | 174 | 695 | 5.95e-138 | 415 |
Find 133 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGCTTTCCCTATGGTTT+TGG | 0.193902 | 1_2:+63100882 | Msa0083920:CDS |
| TTCAAGTATTACAAAATAAT+TGG | 0.222837 | 1_2:-63104643 | None:intergenic |
| TCCATAACTCATGCTTTCTT+TGG | 0.225275 | 1_2:+63102584 | Msa0083920:CDS |
| ATGGGTAGTTACTGAGAAAT+TGG | 0.267713 | 1_2:+63104137 | Msa0083920:CDS |
| AGCAAATCTCTTCAGGAAAA+TGG | 0.286938 | 1_2:+63103586 | Msa0083920:CDS |
| AGGACCAAGGCAACAGTTAT+AGG | 0.295281 | 1_2:+63104087 | Msa0083920:CDS |
| CTCAACAGATCCAATCATTA+AGG | 0.296511 | 1_2:+63101933 | Msa0083920:CDS |
| ATTGTCTTTCTTAAGTTGTT+TGG | 0.309441 | 1_2:+63100796 | Msa0083920:CDS |
| CATGCTTTCTTTGGTTTCAA+TGG | 0.321614 | 1_2:+63102593 | Msa0083920:CDS |
| TTGGAGTTCCAACAGCATTA+AGG | 0.324765 | 1_2:-63103918 | None:intergenic |
| GGATGCTATGATCTTGCCTT+TGG | 0.327298 | 1_2:+63104364 | Msa0083920:CDS |
| TCTATTGCCTTCTTTGTTGT+GGG | 0.334726 | 1_2:+63104421 | Msa0083920:CDS |
| TCCCATTTGTAATGTTTCTC+TGG | 0.336628 | 1_2:-63100826 | None:intergenic |
| AGGCTCCCACACCAAGTTCT+AGG | 0.349691 | 1_2:-63104327 | None:intergenic |
| GATTTCAAAACCTTAATGAT+TGG | 0.350715 | 1_2:-63101943 | None:intergenic |
| TTAACCAAATGAATTTCATT+TGG | 0.366936 | 1_2:+63100665 | Msa0083920:CDS |
| TCTGGAACTAAAACAGTTGC+AGG | 0.378471 | 1_2:-63103844 | None:intergenic |
| GTTGCCAAATGAAATTCATT+TGG | 0.381283 | 1_2:-63100669 | None:intergenic |
| AACCAGAGAAACATTACAAA+TGG | 0.386703 | 1_2:+63100824 | Msa0083920:CDS |
| CACTTGGGAACTTCTACTTC+TGG | 0.390733 | 1_2:-63103862 | None:intergenic |
| GATGCTATGATCTTGCCTTT+GGG | 0.390992 | 1_2:+63104365 | Msa0083920:CDS |
| GAATTTGAAAGTGTGCATTA+TGG | 0.393541 | 1_2:+63100637 | Msa0083920:CDS |
| GTGGCCCAGCAAATCTCTTC+AGG | 0.393738 | 1_2:+63103579 | Msa0083920:CDS |
| TTACAAATGGGAGGCACTTA+AGG | 0.395765 | 1_2:+63100837 | Msa0083920:CDS |
| ATCTATTGCCTTCTTTGTTG+TGG | 0.397674 | 1_2:+63104420 | Msa0083920:CDS |
| TGACTGTTGTAAACTCGATC+TGG | 0.403691 | 1_2:+63104512 | Msa0083920:three_prime_UTR |
| CGGTAGGCTTTGAATGTACT+TGG | 0.409136 | 1_2:-63103533 | None:intergenic |
| CCACATGGGCTATGATCTTC+CGG | 0.409526 | 1_2:-63103792 | None:intergenic |
| CCGCACAACAGTGGAAGATA+TGG | 0.414499 | 1_2:+63102782 | Msa0083920:CDS |
| TCTATGTTCCCAGGTCTTAG+AGG | 0.415597 | 1_2:+63104461 | Msa0083920:CDS |
| CGGTAAAGAAAGTTAGATTC+AGG | 0.418214 | 1_2:-63102238 | None:intergenic |
| CAGGTGTATCAATTATCAAT+TGG | 0.424571 | 1_2:+63101853 | Msa0083920:intron |
| AAACATAAAGTATGAGATAA+GGG | 0.425945 | 1_2:+63102114 | Msa0083920:CDS |
| TAGGTTTGTTTGAGGCTGGT+AGG | 0.426910 | 1_2:+63104106 | Msa0083920:CDS |
| CAAAGAAGGCAATAGATTGC+AGG | 0.430943 | 1_2:-63104414 | None:intergenic |
| AGTTCCAGTGTTGAAATTGT+TGG | 0.435622 | 1_2:+63100711 | Msa0083920:CDS |
| ATTACACTCCTTAATGCTGT+TGG | 0.436203 | 1_2:+63103910 | Msa0083920:CDS |
| CAAACCTATAACTGTTGCCT+TGG | 0.447912 | 1_2:-63104091 | None:intergenic |
| AGGATTCATTTCCTAGAACT+TGG | 0.450671 | 1_2:+63104316 | Msa0083920:intron |
| TTGCAGGTACAGCTGGTGTT+TGG | 0.459649 | 1_2:+63102721 | Msa0083920:intron |
| ATTTCATTTGGCAACAAGCT+AGG | 0.462248 | 1_2:+63100677 | Msa0083920:CDS |
| TTCCTTGTGGAACAAGAAGT+TGG | 0.464966 | 1_2:+63102560 | Msa0083920:CDS |
| GATGCTCTTAAAATAAAATC+AGG | 0.466800 | 1_2:+63104162 | Msa0083920:CDS |
| TGGAAACTCTGCTTTCCCTA+TGG | 0.470085 | 1_2:+63100876 | Msa0083920:CDS |
| GAGATAAGGGAAAATAGAAA+TGG | 0.471145 | 1_2:+63102127 | Msa0083920:CDS |
| TGTGAGAGATGGAGAAGGAA+AGG | 0.472902 | 1_2:+63102088 | Msa0083920:CDS |
| AATAGAAATGGTTACAAAGC+TGG | 0.476155 | 1_2:+63102139 | Msa0083920:CDS |
| AGGCTGGTAGGGTAAATGAA+TGG | 0.476703 | 1_2:+63104118 | Msa0083920:CDS |
| GTTCAAGCTCGATGGCAATT+CGG | 0.480229 | 1_2:+63102301 | Msa0083920:CDS |
| ACCAAAGAAAGCATGAGTTA+TGG | 0.484858 | 1_2:-63102585 | None:intergenic |
| AATCCCAATGTATAATGAAA+AGG | 0.485916 | 1_2:+63100909 | Msa0083920:CDS |
| AGGTTTGTTTGAGGCTGGTA+GGG | 0.485982 | 1_2:+63104107 | Msa0083920:CDS |
| GTTATAGGTTTGTTTGAGGC+TGG | 0.487666 | 1_2:+63104102 | Msa0083920:CDS |
| TTGAAAATCAGCATCAAAGA+TGG | 0.492249 | 1_2:-63102215 | None:intergenic |
| TAAACATAAAGTATGAGATA+AGG | 0.492901 | 1_2:+63102113 | Msa0083920:CDS |
| TCATGCATTGCAGGTACAGC+TGG | 0.493085 | 1_2:+63102714 | Msa0083920:intron |
| TTTGTAGAAAGAGTTTATAT+GGG | 0.493598 | 1_2:+63100766 | Msa0083920:CDS |
| AACAGTTATAGGTTTGTTTG+AGG | 0.493816 | 1_2:+63104098 | Msa0083920:CDS |
| TGGGTAGTTACTGAGAAATT+GGG | 0.496260 | 1_2:+63104138 | Msa0083920:CDS |
| AAAGCTGGTGCTCTTAAAGA+AGG | 0.505067 | 1_2:+63102154 | Msa0083920:CDS |
| TTCAACACTGGAACTATAAG+TGG | 0.505104 | 1_2:-63100703 | None:intergenic |
| TTTCATTTGGCAACAAGCTA+GGG | 0.505126 | 1_2:+63100678 | Msa0083920:CDS |
| TATATAGACAGCACCCCACT+TGG | 0.506102 | 1_2:-63103878 | None:intergenic |
| GAGCTGCATGTGGGTTATCA+TGG | 0.506578 | 1_2:+63101875 | Msa0083920:CDS |
| CTATTGCCTTCTTTGTTGTG+GGG | 0.506806 | 1_2:+63104422 | Msa0083920:CDS |
| CTTGATCAAAATCCACAAGT+TGG | 0.507813 | 1_2:+63102274 | Msa0083920:CDS |
| GGCTGGTAGGGTAAATGAAT+GGG | 0.511827 | 1_2:+63104119 | Msa0083920:CDS |
| CACTAAATGAAGCTGGTGGA+TGG | 0.511876 | 1_2:+63102754 | Msa0083920:CDS |
| GGGATTTGCACCAAAACCAT+AGG | 0.516420 | 1_2:-63100892 | None:intergenic |
| ACCAGAGAAACATTACAAAT+GGG | 0.517363 | 1_2:+63100825 | Msa0083920:CDS |
| AAGGATGATGATATCGAGCT+TGG | 0.528085 | 1_2:+63100856 | Msa0083920:CDS |
| TACGAGCTAGTCTCAAAGGC+TGG | 0.530014 | 1_2:+63102814 | Msa0083920:CDS |
| TATTGCCTTCTTTGTTGTGG+GGG | 0.530266 | 1_2:+63104423 | Msa0083920:CDS |
| CATTCCACTTAGTAATATTG+TGG | 0.530712 | 1_2:+63104034 | Msa0083920:CDS |
| TCGATCTGGGATATCGAGTT+CGG | 0.532920 | 1_2:+63104526 | Msa0083920:three_prime_UTR |
| AAGAATGCAAGAGATGTCAT+TGG | 0.534193 | 1_2:+63102529 | Msa0083920:CDS |
| ATGTTGGCATCTATGTTCCC+AGG | 0.535755 | 1_2:+63104452 | Msa0083920:CDS |
| ACCAAGAAAGCTTACTGAGA+TGG | 0.541040 | 1_2:+63100594 | None:intergenic |
| GAGTGAGTTCCTCTAAGACC+TGG | 0.550085 | 1_2:-63104470 | None:intergenic |
| ACTACCAACAATTTCAACAC+TGG | 0.552023 | 1_2:-63100715 | None:intergenic |
| AAAATACCTTGAGGTCACTA+AGG | 0.552124 | 1_2:-63102848 | None:intergenic |
| TGAATAATAATTCTATCAGA+TGG | 0.555057 | 1_2:-63101898 | None:intergenic |
| TAGAATGTGAGAGATGGAGA+AGG | 0.558986 | 1_2:+63102083 | Msa0083920:CDS |
| AAAATGTTATGTCAATGCAT+AGG | 0.560427 | 1_2:+63104067 | Msa0083920:CDS |
| CTCGTATCACGATCGATGGA+AGG | 0.562630 | 1_2:+63104205 | Msa0083920:CDS |
| AAATGAAGCTGGTGGATGGA+AGG | 0.564281 | 1_2:+63102758 | Msa0083920:CDS |
| GCAGTACGAGCTAGTCTCAA+AGG | 0.568633 | 1_2:+63102810 | Msa0083920:CDS |
| TGGAGATAGAATGTGAGAGA+TGG | 0.570198 | 1_2:+63102077 | Msa0083920:CDS |
| ACCACCTGTGTTGCTGATAA+CGG | 0.570982 | 1_2:-63103553 | None:intergenic |
| GGATTTGCACCAAAACCATA+GGG | 0.574114 | 1_2:-63100891 | None:intergenic |
| ATTTCAGCACTAAATGAAGC+TGG | 0.577109 | 1_2:+63102747 | Msa0083920:CDS |
| TAGAGGAACTCACTCTTGCA+TGG | 0.577849 | 1_2:+63104478 | Msa0083920:exon |
| TTATCAATTGGAGCTGCATG+TGG | 0.578331 | 1_2:+63101865 | Msa0083920:CDS |
| AGTGAGTTCCTCTAAGACCT+GGG | 0.582884 | 1_2:-63104469 | None:intergenic |
| ATTGGACTATCATTTCCTTG+TGG | 0.584551 | 1_2:+63102547 | Msa0083920:CDS |
| TGTGTACCTTAGTGACCTCA+AGG | 0.585422 | 1_2:+63102842 | Msa0083920:CDS |
| GTATCCACAATATTACTAAG+TGG | 0.588421 | 1_2:-63104038 | None:intergenic |
| CATTTCCTAGAACTTGGTGT+GGG | 0.589574 | 1_2:+63104322 | Msa0083920:CDS |
| AAGCCTCGTATCACGATCGA+TGG | 0.591131 | 1_2:+63104201 | Msa0083920:CDS |
| TCATTTCCTAGAACTTGGTG+TGG | 0.591922 | 1_2:+63104321 | Msa0083920:CDS |
| CCCAATGTATAATGAAAAGG+AGG | 0.596084 | 1_2:+63100912 | Msa0083920:CDS |
| CAGAAGTAGAAGTTCCCAAG+TGG | 0.598985 | 1_2:+63103863 | Msa0083920:CDS |
| GACTGTTGTAAACTCGATCT+GGG | 0.605326 | 1_2:+63104513 | Msa0083920:three_prime_UTR |
| TTAAGGAGTGTAATAATACA+AGG | 0.606049 | 1_2:-63103901 | None:intergenic |
| TTGGACTAGTTCAAGCTCGA+TGG | 0.612953 | 1_2:+63102293 | Msa0083920:CDS |
| CACATAAAACTTCTTCCACA+TGG | 0.616199 | 1_2:-63103749 | None:intergenic |
| TTAAACACAACAGAATATGG+TGG | 0.622551 | 1_2:+63102057 | Msa0083920:intron |
| GCTTGAACTAGTCCAACTTG+TGG | 0.622881 | 1_2:-63102286 | None:intergenic |
| CAGCAACACAGGTGGTCATG+TGG | 0.623641 | 1_2:+63103560 | Msa0083920:CDS |
| AGAAGTAGAAGTTCCCAAGT+GGG | 0.627113 | 1_2:+63103864 | Msa0083920:CDS |
| AGAATGTAAATGTGACCACA+TGG | 0.631193 | 1_2:-63103807 | None:intergenic |
| GATCAAGGAATGGGATGGTG+CGG | 0.636879 | 1_2:-63102258 | None:intergenic |
| CCATATCTTCCACTGTTGTG+CGG | 0.638192 | 1_2:-63102782 | None:intergenic |
| CCTGTGTTGCTGATAACGGT+AGG | 0.640256 | 1_2:-63103549 | None:intergenic |
| AACCAACTTCTTGTTCCACA+AGG | 0.642327 | 1_2:-63102562 | None:intergenic |
| ATGGAAGGACCGCACAACAG+TGG | 0.644477 | 1_2:+63102773 | Msa0083920:CDS |
| TATCAATTGGAGCTGCATGT+GGG | 0.644918 | 1_2:+63101866 | Msa0083920:CDS |
| GAAGTAGAAGTTCCCAAGTG+GGG | 0.649479 | 1_2:+63103865 | Msa0083920:CDS |
| AATAGAAATCATAAGAAACA+AGG | 0.650357 | 1_2:+63103610 | Msa0083920:CDS |
| GCTCTTAAAATAAAATCAGG+AGG | 0.655234 | 1_2:+63104165 | Msa0083920:CDS |
| CTTCCATCGATCGTGATACG+AGG | 0.657335 | 1_2:-63104204 | None:intergenic |
| TTAATGCTGTTGGAACTCCA+AGG | 0.658326 | 1_2:+63103920 | Msa0083920:CDS |
| CCTACCGTTATCAGCAACAC+AGG | 0.662586 | 1_2:+63103549 | Msa0083920:CDS |
| TCAGCACTAAATGAAGCTGG+TGG | 0.663266 | 1_2:+63102750 | Msa0083920:CDS |
| ATAGCACTGATTCTTCCCAA+AGG | 0.669004 | 1_2:-63104380 | None:intergenic |
| AGAGAAACATTACAAATGGG+AGG | 0.673251 | 1_2:+63100828 | Msa0083920:CDS |
| TATGTCAATGCATAGGACCA+AGG | 0.675182 | 1_2:+63104074 | Msa0083920:CDS |
| ATATAGACAGCACCCCACTT+GGG | 0.679378 | 1_2:-63103877 | None:intergenic |
| ACCGTTATCAGCAACACAGG+TGG | 0.685287 | 1_2:+63103552 | Msa0083920:CDS |
| CAAGAAATATAAGAGAAACG+TGG | 0.692109 | 1_2:+63104687 | Msa0083920:three_prime_UTR |
| GAATGTAAATGTGACCACAT+GGG | 0.692476 | 1_2:-63103806 | None:intergenic |
| TGATGCAGAAAGTGACCATG+TGG | 0.707458 | 1_2:+63103734 | Msa0083920:intron |
| CCGGAAGATCATAGCCCATG+TGG | 0.731875 | 1_2:+63103792 | Msa0083920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACATGATTAATTTTAATAA+AGG | + | chr1_2:63103078-63103097 | Msa0083920:intron | 10.0% |
| !!! | AGTTATTTTATTTTAGTAAA+TGG | - | chr1_2:63103413-63103432 | None:intergenic | 10.0% |
| !! | CTTTAACTATATATATATAT+AGG | - | chr1_2:63103443-63103462 | None:intergenic | 10.0% |
| !! | CTATATATATATATAGTTAA+AGG | + | chr1_2:63103441-63103460 | Msa0083920:intron | 10.0% |
| !! | AAAACAAAAACAAAAATTCA+AGG | - | chr1_2:63101506-63101525 | None:intergenic | 15.0% |
| !! | ATTAAAGCAAAAAATAGTAT+AGG | - | chr1_2:63101539-63101558 | None:intergenic | 15.0% |
| !! | ATTGATAAAAAATTAGTTCA+TGG | - | chr1_2:63101798-63101817 | None:intergenic | 15.0% |
| !!! | TCAATAGTTAAAAAGTTTTT+TGG | + | chr1_2:63101813-63101832 | Msa0083920:intron | 15.0% |
| !! | AACATTAATCTCAATTAATT+AGG | - | chr1_2:63102352-63102371 | None:intergenic | 15.0% |
| !! | CTAAAATAAAATAACTAGTT+AGG | + | chr1_2:63103417-63103436 | Msa0083920:intron | 15.0% |
| !! | ATATATATATAGTTAAAGGA+TGG | + | chr1_2:63103445-63103464 | Msa0083920:intron | 15.0% |
| !! | AATAATTATGATGATTTGAT+TGG | - | chr1_2:63103674-63103693 | None:intergenic | 15.0% |
| !! | AAATTATGAACTTGATTATA+GGG | - | chr1_2:63103993-63104012 | None:intergenic | 15.0% |
| !! | AAAATTATGAACTTGATTAT+AGG | - | chr1_2:63103994-63104013 | None:intergenic | 15.0% |
| !!! | TCAAATCATTTTTTATCAAT+AGG | - | chr1_2:63104558-63104577 | None:intergenic | 15.0% |
| !! | TTCAAGTATTACAAAATAAT+TGG | - | chr1_2:63104646-63104665 | None:intergenic | 15.0% |
| !! | TTAACCAAATGAATTTCATT+TGG | + | chr1_2:63100665-63100684 | Msa0083920:CDS | 20.0% |
| !!! | TTTTGTAGAAAGAGTTTATA+TGG | + | chr1_2:63100765-63100784 | Msa0083920:CDS | 20.0% |
| !! | TTTGTAGAAAGAGTTTATAT+GGG | + | chr1_2:63100766-63100785 | Msa0083920:CDS | 20.0% |
| !! | TTTCAAATTATTAGCTATGT+CGG | + | chr1_2:63101071-63101090 | Msa0083920:intron | 20.0% |
| !! | TAATTTCAAAAAACAGAAGT+AGG | + | chr1_2:63101261-63101280 | Msa0083920:intron | 20.0% |
| !!! | ATAACACTAGTTTTTTTTAC+AGG | - | chr1_2:63101350-63101369 | None:intergenic | 20.0% |
| !! | GAATATTTATTTGATCTAGT+AGG | + | chr1_2:63101628-63101647 | Msa0083920:intron | 20.0% |
| !! | TGAATAATAATTCTATCAGA+TGG | - | chr1_2:63101901-63101920 | None:intergenic | 20.0% |
| !! | TATTTAAACACAACAGAATA+TGG | + | chr1_2:63102054-63102073 | Msa0083920:intron | 20.0% |
| !! | TAAACATAAAGTATGAGATA+AGG | + | chr1_2:63102113-63102132 | Msa0083920:CDS | 20.0% |
| !! | AAACATAAAGTATGAGATAA+GGG | + | chr1_2:63102114-63102133 | Msa0083920:CDS | 20.0% |
| !! | TATCATTAAATTCCCTAATA+CGG | + | chr1_2:63102620-63102639 | Msa0083920:intron | 20.0% |
| !! | ATGGTTAAAAAGAATGTTAA+AGG | - | chr1_2:63102885-63102904 | None:intergenic | 20.0% |
| !! | AAGATCTATATGATTTAGTT+GGG | - | chr1_2:63102948-63102967 | None:intergenic | 20.0% |
| !! | TAAGATCTATATGATTTAGT+TGG | - | chr1_2:63102949-63102968 | None:intergenic | 20.0% |
| !!! | AATTTTAACATGTGTATGTT+TGG | + | chr1_2:63103172-63103191 | Msa0083920:intron | 20.0% |
| !! | AATAGAAATCATAAGAAACA+AGG | + | chr1_2:63103610-63103629 | Msa0083920:CDS | 20.0% |
| !! | AAATATAGAGAAAATTGCAA+GGG | - | chr1_2:63103644-63103663 | None:intergenic | 20.0% |
| !! | TAAATATAGAGAAAATTGCA+AGG | - | chr1_2:63103645-63103664 | None:intergenic | 20.0% |
| !!! | AATTATTGTACATTTTCTCT+TGG | + | chr1_2:63103687-63103706 | Msa0083920:intron | 20.0% |
| !!! | TATATAGTTTTTTCTTTGTC+CGG | + | chr1_2:63103773-63103792 | Msa0083920:CDS | 20.0% |
| !!! | CTGGTTTACAAATTAAATTT+TGG | - | chr1_2:63103966-63103985 | None:intergenic | 20.0% |
| !!! | TTTTCATGTACTTTTTTTGT+AGG | + | chr1_2:63104010-63104029 | Msa0083920:intron | 20.0% |
| !!! | ATCATTTTTTATCAATAGGA+AGG | - | chr1_2:63104554-63104573 | None:intergenic | 20.0% |
| !!! | AGTTATTTTGTATAGTGATT+GGG | - | chr1_2:63104584-63104603 | None:intergenic | 20.0% |
| !!! | TAGTTATTTTGTATAGTGAT+TGG | - | chr1_2:63104585-63104604 | None:intergenic | 20.0% |
| !! | ATTGTCTTTCTTAAGTTGTT+TGG | + | chr1_2:63100796-63100815 | Msa0083920:CDS | 25.0% |
| ! | AATCCCAATGTATAATGAAA+AGG | + | chr1_2:63100909-63100928 | Msa0083920:CDS | 25.0% |
| ! | TTTAATGTAAGCAAACAAGA+TGG | - | chr1_2:63101229-63101248 | None:intergenic | 25.0% |
| !! | TTTTACAGGAAAACACTTAA+TGG | - | chr1_2:63101336-63101355 | None:intergenic | 25.0% |
| ! | CAAGGAATTAAAAGCAAAAA+TGG | - | chr1_2:63101488-63101507 | None:intergenic | 25.0% |
| ! | GATTTCAAAACCTTAATGAT+TGG | - | chr1_2:63101946-63101965 | None:intergenic | 25.0% |
| !! | ATTTTCTACATTATCTTGCA+TGG | + | chr1_2:63101993-63102012 | Msa0083920:intron | 25.0% |
| ! | ATTAATTAGGAGTTTCATGA+AGG | - | chr1_2:63102339-63102358 | None:intergenic | 25.0% |
| ! | AAAGTTACACTAACATTAGA+TGG | + | chr1_2:63102450-63102469 | Msa0083920:intron | 25.0% |
| ! | TTATGATTGAAAATACCTTG+AGG | - | chr1_2:63102860-63102879 | None:intergenic | 25.0% |
| !!! | TAGCTTTTAGAAAATCATTG+TGG | + | chr1_2:63103257-63103276 | Msa0083920:intron | 25.0% |
| !! | TTAAGGAGTGTAATAATACA+AGG | - | chr1_2:63103904-63103923 | None:intergenic | 25.0% |
| ! | CATTATCAAAATTCTTACCT+TGG | - | chr1_2:63103940-63103959 | None:intergenic | 25.0% |
| ! | AAAATGTTATGTCAATGCAT+AGG | + | chr1_2:63104067-63104086 | Msa0083920:CDS | 25.0% |
| ! | GATGCTCTTAAAATAAAATC+AGG | + | chr1_2:63104162-63104181 | Msa0083920:CDS | 25.0% |
| ! | GTTTATTAATTACCCTTTCA+AGG | + | chr1_2:63104232-63104251 | Msa0083920:intron | 25.0% |
| ! | GAATTTGAAAGTGTGCATTA+TGG | + | chr1_2:63100637-63100656 | Msa0083920:CDS | 30.0% |
| GTTGCCAAATGAAATTCATT+TGG | - | chr1_2:63100672-63100691 | None:intergenic | 30.0% | |
| AACCAGAGAAACATTACAAA+TGG | + | chr1_2:63100824-63100843 | Msa0083920:CDS | 30.0% | |
| ACCAGAGAAACATTACAAAT+GGG | + | chr1_2:63100825-63100844 | Msa0083920:CDS | 30.0% | |
| ! | CCTCCTTTTCATTATACATT+GGG | - | chr1_2:63100915-63100934 | None:intergenic | 30.0% |
| ! | ACCTCCTTTTCATTATACAT+TGG | - | chr1_2:63100916-63100935 | None:intergenic | 30.0% |
| TATATATCACTGTGAAGCTA+TGG | + | chr1_2:63100945-63100964 | Msa0083920:intron | 30.0% | |
| TTCAGTGTAATTACAAGTGA+CGG | - | chr1_2:63101040-63101059 | None:intergenic | 30.0% | |
| AAAAAACAGAAGTAGGTTGT+TGG | + | chr1_2:63101268-63101287 | Msa0083920:intron | 30.0% | |
| CGAGAATCAAAAGCAAAAAA+TGG | + | chr1_2:63101708-63101727 | Msa0083920:intron | 30.0% | |
| CAGGTGTATCAATTATCAAT+TGG | + | chr1_2:63101853-63101872 | Msa0083920:intron | 30.0% | |
| TTAAACACAACAGAATATGG+TGG | + | chr1_2:63102057-63102076 | Msa0083920:intron | 30.0% | |
| GAGATAAGGGAAAATAGAAA+TGG | + | chr1_2:63102127-63102146 | Msa0083920:CDS | 30.0% | |
| AATAGAAATGGTTACAAAGC+TGG | + | chr1_2:63102139-63102158 | Msa0083920:CDS | 30.0% | |
| TTGAAAATCAGCATCAAAGA+TGG | - | chr1_2:63102218-63102237 | None:intergenic | 30.0% | |
| CACATAAACTCAATCAGATA+TGG | + | chr1_2:63102398-63102417 | Msa0083920:intron | 30.0% | |
| !!! | GTGTAACTTTTTTTTACCCA+TGG | - | chr1_2:63102440-63102459 | None:intergenic | 30.0% |
| ATTAACTGCAAGCATTAAGA+AGG | - | chr1_2:63102489-63102508 | None:intergenic | 30.0% | |
| CATCATCATCTAATATCACA+TGG | - | chr1_2:63102684-63102703 | None:intergenic | 30.0% | |
| CATGTGATATTAGATGATGA+TGG | + | chr1_2:63102682-63102701 | Msa0083920:intron | 30.0% | |
| !! | ATTAGATGATGATGGTGATA+TGG | + | chr1_2:63102690-63102709 | Msa0083920:intron | 30.0% |
| ACATTATCTAGTTAGGTTCA+TGG | - | chr1_2:63102904-63102923 | None:intergenic | 30.0% | |
| ATGAACCTAACTAGATAATG+TGG | + | chr1_2:63102903-63102922 | Msa0083920:intron | 30.0% | |
| ACTATCCACATTATCTAGTT+AGG | - | chr1_2:63102911-63102930 | None:intergenic | 30.0% | |
| TCTTAGCAACCAATTAAGAT+TGG | + | chr1_2:63102964-63102983 | Msa0083920:intron | 30.0% | |
| CTTAGCAACCAATTAAGATT+GGG | + | chr1_2:63102965-63102984 | Msa0083920:intron | 30.0% | |
| !! | TTTTAATAAAGGAGAGTACG+TGG | + | chr1_2:63103089-63103108 | Msa0083920:intron | 30.0% |
| ! | TTTAATAAAGGAGAGTACGT+GGG | + | chr1_2:63103090-63103109 | Msa0083920:intron | 30.0% |
| AAGCTAAAAAAAAAACCACG+TGG | + | chr1_2:63103113-63103132 | Msa0083920:intron | 30.0% | |
| !! | TATGATTTTGACATACCCAT+CGG | - | chr1_2:63103202-63103221 | None:intergenic | 30.0% |
| TAAACACTATAGCCTATGTT+TGG | - | chr1_2:63103313-63103332 | None:intergenic | 30.0% | |
| CACTTTCTGCATCATATATA+TGG | - | chr1_2:63103728-63103747 | None:intergenic | 30.0% | |
| AACTTGATTATAGGGAAAAC+TGG | - | chr1_2:63103985-63104004 | None:intergenic | 30.0% | |
| CATTCCACTTAGTAATATTG+TGG | + | chr1_2:63104034-63104053 | Msa0083920:CDS | 30.0% | |
| GTATCCACAATATTACTAAG+TGG | - | chr1_2:63104041-63104060 | None:intergenic | 30.0% | |
| ! | AACAGTTATAGGTTTGTTTG+AGG | + | chr1_2:63104098-63104117 | Msa0083920:CDS | 30.0% |
| GCTCTTAAAATAAAATCAGG+AGG | + | chr1_2:63104165-63104184 | Msa0083920:CDS | 30.0% | |
| TATTAATTACCCTTTCAAGG+AGG | + | chr1_2:63104235-63104254 | Msa0083920:intron | 30.0% | |
| TCAACAAACAAGTAAGTACA+AGG | - | chr1_2:63104287-63104306 | None:intergenic | 30.0% | |
| ! | TTGTTTGTTGATGTTGAAAC+AGG | + | chr1_2:63104296-63104315 | Msa0083920:intron | 30.0% |
| TTAGTTTCTTATATTGCAGC+TGG | + | chr1_2:63104608-63104627 | Msa0083920:intron | 30.0% | |
| CAAGAAATATAAGAGAAACG+TGG | + | chr1_2:63104687-63104706 | Msa0083920:three_prime_UTR | 30.0% | |
| ATTTCATTTGGCAACAAGCT+AGG | + | chr1_2:63100677-63100696 | Msa0083920:CDS | 35.0% | |
| TTTCATTTGGCAACAAGCTA+GGG | + | chr1_2:63100678-63100697 | Msa0083920:CDS | 35.0% | |
| TTCAACACTGGAACTATAAG+TGG | - | chr1_2:63100706-63100725 | None:intergenic | 35.0% | |
| ! | AGTTCCAGTGTTGAAATTGT+TGG | + | chr1_2:63100711-63100730 | Msa0083920:CDS | 35.0% |
| ACTACCAACAATTTCAACAC+TGG | - | chr1_2:63100718-63100737 | None:intergenic | 35.0% | |
| TCCCATTTGTAATGTTTCTC+TGG | - | chr1_2:63100829-63100848 | None:intergenic | 35.0% | |
| AGAGAAACATTACAAATGGG+AGG | + | chr1_2:63100828-63100847 | Msa0083920:CDS | 35.0% | |
| CCCAATGTATAATGAAAAGG+AGG | + | chr1_2:63100912-63100931 | Msa0083920:CDS | 35.0% | |
| AGAGCTATGAAGCATAGATA+CGG | - | chr1_2:63101132-63101151 | None:intergenic | 35.0% | |
| CTCAACAGATCCAATCATTA+AGG | + | chr1_2:63101933-63101952 | Msa0083920:CDS | 35.0% | |
| CGGTAAAGAAAGTTAGATTC+AGG | - | chr1_2:63102241-63102260 | None:intergenic | 35.0% | |
| !! | ATTTTGATCAAGGAATGGGA+TGG | - | chr1_2:63102266-63102285 | None:intergenic | 35.0% |
| !! | GTGGATTTTGATCAAGGAAT+GGG | - | chr1_2:63102270-63102289 | None:intergenic | 35.0% |
| !! | TGTGGATTTTGATCAAGGAA+TGG | - | chr1_2:63102271-63102290 | None:intergenic | 35.0% |
| !! | CAACTTGTGGATTTTGATCA+AGG | - | chr1_2:63102276-63102295 | None:intergenic | 35.0% |
| CTTGATCAAAATCCACAAGT+TGG | + | chr1_2:63102274-63102293 | Msa0083920:CDS | 35.0% | |
| TGAGATTTGATGAGATCCAT+GGG | + | chr1_2:63102421-63102440 | Msa0083920:intron | 35.0% | |
| AAGAATGCAAGAGATGTCAT+TGG | + | chr1_2:63102529-63102548 | Msa0083920:CDS | 35.0% | |
| ATTGGACTATCATTTCCTTG+TGG | + | chr1_2:63102547-63102566 | Msa0083920:CDS | 35.0% | |
| TCCATAACTCATGCTTTCTT+TGG | + | chr1_2:63102584-63102603 | Msa0083920:CDS | 35.0% | |
| ! | ACCAAAGAAAGCATGAGTTA+TGG | - | chr1_2:63102588-63102607 | None:intergenic | 35.0% |
| ! | CATGCTTTCTTTGGTTTCAA+TGG | + | chr1_2:63102593-63102612 | Msa0083920:CDS | 35.0% |
| TTAAATTCCCTAATACGGCT+TGG | + | chr1_2:63102625-63102644 | Msa0083920:intron | 35.0% | |
| AGATATTCCAAGCCGTATTA+GGG | - | chr1_2:63102635-63102654 | None:intergenic | 35.0% | |
| TAGATATTCCAAGCCGTATT+AGG | - | chr1_2:63102636-63102655 | None:intergenic | 35.0% | |
| ATTTCAGCACTAAATGAAGC+TGG | + | chr1_2:63102747-63102766 | Msa0083920:CDS | 35.0% | |
| AAAATACCTTGAGGTCACTA+AGG | - | chr1_2:63102851-63102870 | None:intergenic | 35.0% | |
| !! | ATGATTTTGACATACCCATC+GGG | - | chr1_2:63103201-63103220 | None:intergenic | 35.0% |
| ATAGCCTATGTTTGGTATCA+CGG | - | chr1_2:63103305-63103324 | None:intergenic | 35.0% | |
| !! | TTTTCCTGAAGAGATTTGCT+GGG | - | chr1_2:63103586-63103605 | None:intergenic | 35.0% |
| ! | ATTTTCCTGAAGAGATTTGC+TGG | - | chr1_2:63103587-63103606 | None:intergenic | 35.0% |
| AGCAAATCTCTTCAGGAAAA+TGG | + | chr1_2:63103586-63103605 | Msa0083920:CDS | 35.0% | |
| CACATAAAACTTCTTCCACA+TGG | - | chr1_2:63103752-63103771 | None:intergenic | 35.0% | |
| GAATGTAAATGTGACCACAT+GGG | - | chr1_2:63103809-63103828 | None:intergenic | 35.0% | |
| AGAATGTAAATGTGACCACA+TGG | - | chr1_2:63103810-63103829 | None:intergenic | 35.0% | |
| ATTACACTCCTTAATGCTGT+TGG | + | chr1_2:63103910-63103929 | Msa0083920:CDS | 35.0% | |
| ATGGGTAGTTACTGAGAAAT+TGG | + | chr1_2:63104137-63104156 | Msa0083920:CDS | 35.0% | |
| TGGGTAGTTACTGAGAAATT+GGG | + | chr1_2:63104138-63104157 | Msa0083920:CDS | 35.0% | |
| ACATACTATCCTCCTTGAAA+GGG | - | chr1_2:63104247-63104266 | None:intergenic | 35.0% | |
| AACATACTATCCTCCTTGAA+AGG | - | chr1_2:63104248-63104267 | None:intergenic | 35.0% | |
| AGGATTCATTTCCTAGAACT+TGG | + | chr1_2:63104316-63104335 | Msa0083920:intron | 35.0% | |
| ATCTATTGCCTTCTTTGTTG+TGG | + | chr1_2:63104420-63104439 | Msa0083920:CDS | 35.0% | |
| ! | TCTATTGCCTTCTTTGTTGT+GGG | + | chr1_2:63104421-63104440 | Msa0083920:CDS | 35.0% |
| !! | TTACAAATGGGAGGCACTTA+AGG | + | chr1_2:63100837-63100856 | Msa0083920:CDS | 40.0% |
| AAGGATGATGATATCGAGCT+TGG | + | chr1_2:63100856-63100875 | Msa0083920:CDS | 40.0% | |
| GGATTTGCACCAAAACCATA+GGG | - | chr1_2:63100894-63100913 | None:intergenic | 40.0% | |
| ATGAAGCATAGATACGGACA+CGG | - | chr1_2:63101126-63101145 | None:intergenic | 40.0% | |
| AATTGATACACCTGCAAGCA+GGG | - | chr1_2:63101847-63101866 | None:intergenic | 40.0% | |
| TAATTGATACACCTGCAAGC+AGG | - | chr1_2:63101848-63101867 | None:intergenic | 40.0% | |
| TTATCAATTGGAGCTGCATG+TGG | + | chr1_2:63101865-63101884 | Msa0083920:CDS | 40.0% | |
| TATCAATTGGAGCTGCATGT+GGG | + | chr1_2:63101866-63101885 | Msa0083920:CDS | 40.0% | |
| TGGAGATAGAATGTGAGAGA+TGG | + | chr1_2:63102077-63102096 | Msa0083920:CDS | 40.0% | |
| TAGAATGTGAGAGATGGAGA+AGG | + | chr1_2:63102083-63102102 | Msa0083920:CDS | 40.0% | |
| AAAGCTGGTGCTCTTAAAGA+AGG | + | chr1_2:63102154-63102173 | Msa0083920:CDS | 40.0% | |
| GTGAGATTTGATGAGATCCA+TGG | + | chr1_2:63102420-63102439 | Msa0083920:intron | 40.0% | |
| TTCCTTGTGGAACAAGAAGT+TGG | + | chr1_2:63102560-63102579 | Msa0083920:CDS | 40.0% | |
| AACCAACTTCTTGTTCCACA+AGG | - | chr1_2:63102565-63102584 | None:intergenic | 40.0% | |
| TGATATGGTTCATGCATTGC+AGG | + | chr1_2:63102705-63102724 | Msa0083920:intron | 40.0% | |
| CCAATTAAGATTGGGTCTAG+CGG | + | chr1_2:63102973-63102992 | Msa0083920:intron | 40.0% | |
| AGAAACAACTATGATCCACG+TGG | - | chr1_2:63103131-63103150 | None:intergenic | 40.0% | |
| TGTATGTTTGGTATCCCGAT+GGG | + | chr1_2:63103184-63103203 | Msa0083920:intron | 40.0% | |
| TCTACCGTGATACCAAACAT+AGG | + | chr1_2:63103298-63103317 | Msa0083920:intron | 40.0% | |
| ! | TCTGGAACTAAAACAGTTGC+AGG | - | chr1_2:63103847-63103866 | None:intergenic | 40.0% |
| AGAAGTAGAAGTTCCCAAGT+GGG | + | chr1_2:63103864-63103883 | Msa0083920:CDS | 40.0% | |
| TTGGAGTTCCAACAGCATTA+AGG | - | chr1_2:63103921-63103940 | None:intergenic | 40.0% | |
| TTAATGCTGTTGGAACTCCA+AGG | + | chr1_2:63103920-63103939 | Msa0083920:CDS | 40.0% | |
| TATGTCAATGCATAGGACCA+AGG | + | chr1_2:63104074-63104093 | Msa0083920:CDS | 40.0% | |
| CAAACCTATAACTGTTGCCT+TGG | - | chr1_2:63104094-63104113 | None:intergenic | 40.0% | |
| ! | GTTATAGGTTTGTTTGAGGC+TGG | + | chr1_2:63104102-63104121 | Msa0083920:CDS | 40.0% |
| ! | TCATTTCCTAGAACTTGGTG+TGG | + | chr1_2:63104321-63104340 | Msa0083920:CDS | 40.0% |
| !! | CATTTCCTAGAACTTGGTGT+GGG | + | chr1_2:63104322-63104341 | Msa0083920:CDS | 40.0% |
| CATAGCATCCACACAAAAAG+AGG | - | chr1_2:63104354-63104373 | None:intergenic | 40.0% | |
| GATGCTATGATCTTGCCTTT+GGG | + | chr1_2:63104365-63104384 | Msa0083920:CDS | 40.0% | |
| !! | ATAGCACTGATTCTTCCCAA+AGG | - | chr1_2:63104383-63104402 | None:intergenic | 40.0% |
| CAAAGAAGGCAATAGATTGC+AGG | - | chr1_2:63104417-63104436 | None:intergenic | 40.0% | |
| ! | CTATTGCCTTCTTTGTTGTG+GGG | + | chr1_2:63104422-63104441 | Msa0083920:CDS | 40.0% |
| ! | TATTGCCTTCTTTGTTGTGG+GGG | + | chr1_2:63104423-63104442 | Msa0083920:CDS | 40.0% |
| TGACTGTTGTAAACTCGATC+TGG | + | chr1_2:63104512-63104531 | Msa0083920:three_prime_UTR | 40.0% | |
| GACTGTTGTAAACTCGATCT+GGG | + | chr1_2:63104513-63104532 | Msa0083920:three_prime_UTR | 40.0% | |
| TGGAAACTCTGCTTTCCCTA+TGG | + | chr1_2:63100876-63100895 | Msa0083920:CDS | 45.0% | |
| ! | CTCTGCTTTCCCTATGGTTT+TGG | + | chr1_2:63100882-63100901 | Msa0083920:CDS | 45.0% |
| GGGATTTGCACCAAAACCAT+AGG | - | chr1_2:63100895-63100914 | None:intergenic | 45.0% | |
| TGTTGGCACAATATACGTCG+TGG | + | chr1_2:63101285-63101304 | Msa0083920:intron | 45.0% | |
| TGTGAGAGATGGAGAAGGAA+AGG | + | chr1_2:63102088-63102107 | Msa0083920:CDS | 45.0% | |
| GCTTGAACTAGTCCAACTTG+TGG | - | chr1_2:63102289-63102308 | None:intergenic | 45.0% | |
| !! | TTGGACTAGTTCAAGCTCGA+TGG | + | chr1_2:63102293-63102312 | Msa0083920:CDS | 45.0% |
| GTTCAAGCTCGATGGCAATT+CGG | + | chr1_2:63102301-63102320 | Msa0083920:CDS | 45.0% | |
| TCAGCACTAAATGAAGCTGG+TGG | + | chr1_2:63102750-63102769 | Msa0083920:CDS | 45.0% | |
| CACTAAATGAAGCTGGTGGA+TGG | + | chr1_2:63102754-63102773 | Msa0083920:CDS | 45.0% | |
| ! | AAATGAAGCTGGTGGATGGA+AGG | + | chr1_2:63102758-63102777 | Msa0083920:CDS | 45.0% |
| CCATATCTTCCACTGTTGTG+CGG | - | chr1_2:63102785-63102804 | None:intergenic | 45.0% | |
| TGTGTACCTTAGTGACCTCA+AGG | + | chr1_2:63102842-63102861 | Msa0083920:CDS | 45.0% | |
| CCGCTAGACCCAATCTTAAT+TGG | - | chr1_2:63102976-63102995 | None:intergenic | 45.0% | |
| GTGTATGTTTGGTATCCCGA+TGG | + | chr1_2:63103183-63103202 | Msa0083920:intron | 45.0% | |
| !! | CGGTAGGCTTTGAATGTACT+TGG | - | chr1_2:63103536-63103555 | None:intergenic | 45.0% |
| ! | ACCACCTGTGTTGCTGATAA+CGG | - | chr1_2:63103556-63103575 | None:intergenic | 45.0% |
| TGATGCAGAAAGTGACCATG+TGG | + | chr1_2:63103734-63103753 | Msa0083920:intron | 45.0% | |
| CACTTGGGAACTTCTACTTC+TGG | - | chr1_2:63103865-63103884 | None:intergenic | 45.0% | |
| CAGAAGTAGAAGTTCCCAAG+TGG | + | chr1_2:63103863-63103882 | Msa0083920:CDS | 45.0% | |
| GAAGTAGAAGTTCCCAAGTG+GGG | + | chr1_2:63103865-63103884 | Msa0083920:CDS | 45.0% | |
| ATATAGACAGCACCCCACTT+GGG | - | chr1_2:63103880-63103899 | None:intergenic | 45.0% | |
| TATATAGACAGCACCCCACT+TGG | - | chr1_2:63103881-63103900 | None:intergenic | 45.0% | |
| AGGACCAAGGCAACAGTTAT+AGG | + | chr1_2:63104087-63104106 | Msa0083920:CDS | 45.0% | |
| ! | TAGGTTTGTTTGAGGCTGGT+AGG | + | chr1_2:63104106-63104125 | Msa0083920:CDS | 45.0% |
| ! | AGGTTTGTTTGAGGCTGGTA+GGG | + | chr1_2:63104107-63104126 | Msa0083920:CDS | 45.0% |
| AGGCTGGTAGGGTAAATGAA+TGG | + | chr1_2:63104118-63104137 | Msa0083920:CDS | 45.0% | |
| GGCTGGTAGGGTAAATGAAT+GGG | + | chr1_2:63104119-63104138 | Msa0083920:CDS | 45.0% | |
| CAAGGAGGATAGTATGTTGC+TGG | + | chr1_2:63104250-63104269 | Msa0083920:intron | 45.0% | |
| GCATCCACACAAAAAGAGGT+AGG | - | chr1_2:63104350-63104369 | None:intergenic | 45.0% | |
| GGATGCTATGATCTTGCCTT+TGG | + | chr1_2:63104364-63104383 | Msa0083920:CDS | 45.0% | |
| ATGTTGGCATCTATGTTCCC+AGG | + | chr1_2:63104452-63104471 | Msa0083920:CDS | 45.0% | |
| TCTATGTTCCCAGGTCTTAG+AGG | + | chr1_2:63104461-63104480 | Msa0083920:CDS | 45.0% | |
| !! | AGTGAGTTCCTCTAAGACCT+GGG | - | chr1_2:63104472-63104491 | None:intergenic | 45.0% |
| TAGAGGAACTCACTCTTGCA+TGG | + | chr1_2:63104478-63104497 | Msa0083920:exon | 45.0% | |
| ! | TCGATCTGGGATATCGAGTT+CGG | + | chr1_2:63104526-63104545 | Msa0083920:three_prime_UTR | 45.0% |
| !! | TCTATTATTTAAATAAATTT+AGG | + | chr1_2:63103496-63103515 | Msa0083920:intron | 5.0% |
| CACTGTGAAGCTATGGAGCA+CGG | + | chr1_2:63100952-63100971 | Msa0083920:intron | 50.0% | |
| !! | TACAAGTGACGGTGTCGTGT+CGG | - | chr1_2:63101029-63101048 | None:intergenic | 50.0% |
| ATAGATACGGACACGGACAC+GGG | - | chr1_2:63101119-63101138 | None:intergenic | 50.0% | |
| CATAGATACGGACACGGACA+CGG | - | chr1_2:63101120-63101139 | None:intergenic | 50.0% | |
| ! | GAGCTGCATGTGGGTTATCA+TGG | + | chr1_2:63101875-63101894 | Msa0083920:CDS | 50.0% |
| GATCAAGGAATGGGATGGTG+CGG | - | chr1_2:63102261-63102280 | None:intergenic | 50.0% | |
| TCATGCATTGCAGGTACAGC+TGG | + | chr1_2:63102714-63102733 | Msa0083920:intron | 50.0% | |
| TTGCAGGTACAGCTGGTGTT+TGG | + | chr1_2:63102721-63102740 | Msa0083920:intron | 50.0% | |
| CCGCACAACAGTGGAAGATA+TGG | + | chr1_2:63102782-63102801 | Msa0083920:CDS | 50.0% | |
| ! | GCAGTACGAGCTAGTCTCAA+AGG | + | chr1_2:63102810-63102829 | Msa0083920:CDS | 50.0% |
| ! | TACGAGCTAGTCTCAAAGGC+TGG | + | chr1_2:63102814-63102833 | Msa0083920:CDS | 50.0% |
| !! | CCTGTGTTGCTGATAACGGT+AGG | - | chr1_2:63103552-63103571 | None:intergenic | 50.0% |
| CCTACCGTTATCAGCAACAC+AGG | + | chr1_2:63103549-63103568 | Msa0083920:CDS | 50.0% | |
| ACCGTTATCAGCAACACAGG+TGG | + | chr1_2:63103552-63103571 | Msa0083920:CDS | 50.0% | |
| ! | CCACATGGGCTATGATCTTC+CGG | - | chr1_2:63103795-63103814 | None:intergenic | 50.0% |
| AAGCCTCGTATCACGATCGA+TGG | + | chr1_2:63104201-63104220 | Msa0083920:CDS | 50.0% | |
| CTTCCATCGATCGTGATACG+AGG | - | chr1_2:63104207-63104226 | None:intergenic | 50.0% | |
| CTCGTATCACGATCGATGGA+AGG | + | chr1_2:63104205-63104224 | Msa0083920:CDS | 50.0% | |
| ! | GGAGCCTACCTCTTTTTGTG+TGG | + | chr1_2:63104343-63104362 | Msa0083920:CDS | 50.0% |
| !! | GAGTGAGTTCCTCTAAGACC+TGG | - | chr1_2:63104473-63104492 | None:intergenic | 50.0% |
| TATGGAGCACGGACACTCCT+CGG | + | chr1_2:63100963-63100982 | Msa0083920:intron | 55.0% | |
| GACACGCACGAGTAGTTACG+TGG | + | chr1_2:63101201-63101220 | Msa0083920:intron | 55.0% | |
| ATGGAAGGACCGCACAACAG+TGG | + | chr1_2:63102773-63102792 | Msa0083920:CDS | 55.0% | |
| CAGCAACACAGGTGGTCATG+TGG | + | chr1_2:63103560-63103579 | Msa0083920:CDS | 55.0% | |
| GTGGCCCAGCAAATCTCTTC+AGG | + | chr1_2:63103579-63103598 | Msa0083920:CDS | 55.0% | |
| CCGGAAGATCATAGCCCATG+TGG | + | chr1_2:63103792-63103811 | Msa0083920:CDS | 55.0% | |
| AGGCTCCCACACCAAGTTCT+AGG | - | chr1_2:63104330-63104349 | None:intergenic | 55.0% | |
| ! | GCCTTCTTTGTTGTGGGGGT+TGG | + | chr1_2:63104427-63104446 | Msa0083920:CDS | 55.0% |
| GCCAACCCCCACAACAAAGA+AGG | - | chr1_2:63104431-63104450 | None:intergenic | 55.0% | |
| !! | GTTGTGGGGGTTGGCTATGT+TGG | + | chr1_2:63104436-63104455 | Msa0083920:CDS | 55.0% |
| AGCACGGACACTCCTCGGAT+TGG | + | chr1_2:63100968-63100987 | Msa0083920:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+GGG | + | chr1_2:63100969-63100988 | Msa0083920:intron | 60.0% | |
| ACACGACACGTGTCCGACAC+CGG | - | chr1_2:63101001-63101020 | None:intergenic | 60.0% | |
| CACGGACACGGGACACAACA+CGG | - | chr1_2:63101108-63101127 | None:intergenic | 60.0% | |
| CTACTCGTGCGTGTCGTGTG+TGG | - | chr1_2:63101196-63101215 | None:intergenic | 60.0% | |
| CACCTGCAAGCAGGGAACAG+TGG | - | chr1_2:63101839-63101858 | None:intergenic | 60.0% | |
| ! | TCCTCGGATTGGGCGTGTCC+CGG | + | chr1_2:63100979-63100998 | Msa0083920:intron | 65.0% |
| GATTGGGCGTGTCCCGGTGT+CGG | + | chr1_2:63100985-63101004 | Msa0083920:intron | 65.0% | |
| CACGACACGTGTCCGACACC+GGG | - | chr1_2:63101000-63101019 | None:intergenic | 65.0% | |
| GGCCACTGTTCCCTGCTTGC+AGG | + | chr1_2:63101834-63101853 | Msa0083920:intron | 65.0% | |
| ACCGGGACACGCCCAATCCG+AGG | - | chr1_2:63100983-63101002 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 63100603 | 63104746 | 63100603 | ID=Msa0083920;Name=Msa0083920 |
| chr1_2 | mRNA | 63100603 | 63104746 | 63100603 | ID=Msa0083920-mRNA-1;Parent=Msa0083920;Name=Msa0083920-mRNA-1;_AED=0.07;_eAED=0.07;_QI=10|1|1|1|0.88|0.8|10|241|530 |
| chr1_2 | exon | 63100603 | 63100933 | 63100603 | ID=Msa0083920-mRNA-1:exon:21126;Parent=Msa0083920-mRNA-1 |
| chr1_2 | exon | 63101856 | 63101954 | 63101856 | ID=Msa0083920-mRNA-1:exon:21127;Parent=Msa0083920-mRNA-1 |
| chr1_2 | exon | 63102070 | 63102322 | 63102070 | ID=Msa0083920-mRNA-1:exon:21128;Parent=Msa0083920-mRNA-1 |
| chr1_2 | exon | 63102504 | 63102614 | 63102504 | ID=Msa0083920-mRNA-1:exon:21129;Parent=Msa0083920-mRNA-1 |
| chr1_2 | exon | 63102727 | 63102863 | 63102727 | ID=Msa0083920-mRNA-1:exon:21130;Parent=Msa0083920-mRNA-1 |
| chr1_2 | exon | 63103518 | 63103631 | 63103518 | ID=Msa0083920-mRNA-1:exon:21131;Parent=Msa0083920-mRNA-1 |
| chr1_2 | exon | 63103742 | 63103941 | 63103742 | ID=Msa0083920-mRNA-1:exon:21132;Parent=Msa0083920-mRNA-1 |
| chr1_2 | exon | 63104032 | 63104226 | 63104032 | ID=Msa0083920-mRNA-1:exon:21133;Parent=Msa0083920-mRNA-1 |
| chr1_2 | exon | 63104318 | 63104606 | 63104318 | ID=Msa0083920-mRNA-1:exon:21134;Parent=Msa0083920-mRNA-1 |
| chr1_2 | exon | 63104632 | 63104746 | 63104632 | ID=Msa0083920-mRNA-1:exon:21135;Parent=Msa0083920-mRNA-1 |
| chr1_2 | five_prime_UTR | 63100603 | 63100612 | 63100603 | ID=Msa0083920-mRNA-1:five_prime_utr;Parent=Msa0083920-mRNA-1 |
| chr1_2 | CDS | 63100613 | 63100933 | 63100613 | ID=Msa0083920-mRNA-1:cds;Parent=Msa0083920-mRNA-1 |
| chr1_2 | CDS | 63101856 | 63101954 | 63101856 | ID=Msa0083920-mRNA-1:cds;Parent=Msa0083920-mRNA-1 |
| chr1_2 | CDS | 63102070 | 63102322 | 63102070 | ID=Msa0083920-mRNA-1:cds;Parent=Msa0083920-mRNA-1 |
| chr1_2 | CDS | 63102504 | 63102614 | 63102504 | ID=Msa0083920-mRNA-1:cds;Parent=Msa0083920-mRNA-1 |
| chr1_2 | CDS | 63102727 | 63102863 | 63102727 | ID=Msa0083920-mRNA-1:cds;Parent=Msa0083920-mRNA-1 |
| chr1_2 | CDS | 63103518 | 63103631 | 63103518 | ID=Msa0083920-mRNA-1:cds;Parent=Msa0083920-mRNA-1 |
| chr1_2 | CDS | 63103742 | 63103941 | 63103742 | ID=Msa0083920-mRNA-1:cds;Parent=Msa0083920-mRNA-1 |
| chr1_2 | CDS | 63104032 | 63104226 | 63104032 | ID=Msa0083920-mRNA-1:cds;Parent=Msa0083920-mRNA-1 |
| chr1_2 | CDS | 63104318 | 63104480 | 63104318 | ID=Msa0083920-mRNA-1:cds;Parent=Msa0083920-mRNA-1 |
| chr1_2 | three_prime_UTR | 63104481 | 63104606 | 63104481 | ID=Msa0083920-mRNA-1:three_prime_utr;Parent=Msa0083920-mRNA-1 |
| chr1_2 | three_prime_UTR | 63104632 | 63104746 | 63104632 | ID=Msa0083920-mRNA-1:three_prime_utr;Parent=Msa0083920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
