AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0880500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0880500 MtrunA17_Chr8g0386201 97.633 338 8 0 1 338 1 338 0.0 679
Msa0880500 MtrunA17_Chr8g0386201 50.730 274 113 3 342 598 43 311 2.47e-85 270
Msa0880500 MtrunA17_Chr8g0386171 68.139 317 70 1 338 623 46 362 4.40e-151 440
Msa0880500 MtrunA17_Chr8g0386171 43.544 333 143 3 11 311 18 337 3.34e-89 281
Msa0880500 MtrunA17_Chr5g0396351 45.659 311 163 4 1 310 1 306 4.53e-84 268
Msa0880500 MtrunA17_Chr5g0396351 42.966 263 140 3 342 595 43 304 7.08e-64 214
Msa0880500 MtrunA17_Chr8g0386191 84.397 141 3 5 425 562 54 178 4.14e-67 217
Msa0880500 MtrunA17_Chr8g0386191 38.961 154 61 6 126 275 54 178 1.45e-25 104
Msa0880500 MtrunA17_Chr7g0249571 33.778 225 139 7 43 260 36 257 6.18e-24 103
Msa0880500 MtrunA17_Chr7g0249571 32.995 197 126 5 340 531 34 229 2.04e-16 80.9
Msa0880500 MtrunA17_Chr4g0025981 33.816 207 122 6 347 545 44 243 4.93e-21 94.7
Msa0880500 MtrunA17_Chr4g0025981 25.652 230 151 6 47 266 43 262 1.53e-14 75.1
Msa0880500 MtrunA17_Chr4g0026001 31.683 202 131 4 347 544 17 215 6.86e-20 90.1
Msa0880500 MtrunA17_Chr4g0026001 26.512 215 142 7 47 253 16 222 1.70e-13 71.2
Msa0880500 MtrunA17_Chr3g0124471 29.134 254 153 9 49 289 30 269 1.00e-18 87.4
Msa0880500 MtrunA17_Chr4g0025971 32.683 205 124 5 334 533 7 202 4.03e-18 85.1
Msa0880500 MtrunA17_Chr4g0025971 26.606 218 138 5 47 253 16 222 9.82e-14 72.0
Msa0880500 MtrunA17_Chr7g0267011 31.250 192 119 6 347 532 11 195 1.01e-17 82.0
Msa0880500 MtrunA17_Chr7g0267011 28.061 196 129 5 43 232 6 195 4.83e-17 80.1
Msa0880500 MtrunA17_Chr7g0244061 29.956 227 143 8 347 562 32 253 3.90e-17 82.8
Msa0880500 MtrunA17_Chr7g0244061 27.368 190 129 4 42 226 26 211 1.76e-11 65.5
Msa0880500 MtrunA17_Chr8g0357481 31.390 223 137 6 40 250 9 227 6.60e-17 82.0
Msa0880500 MtrunA17_Chr6g0459281 29.851 201 130 5 344 538 13 208 8.50e-17 80.9
Msa0880500 MtrunA17_Chr6g0459281 28.426 197 129 6 45 234 13 204 3.43e-14 73.2
Msa0880500 MtrunA17_Chr4g0075531 27.111 225 146 4 41 252 3 222 2.24e-16 79.3
Msa0880500 MtrunA17_Chr3g0122901 27.232 224 147 7 43 263 73 283 3.05e-16 80.1
Msa0880500 MtrunA17_Chr3g0122901 30.000 210 135 8 348 550 79 283 8.50e-13 69.7
Msa0880500 MtrunA17_Chr3g0124481 28.390 236 149 9 63 289 30 254 4.39e-16 79.3
Msa0880500 MtrunA17_Chr3g0124481 34.194 155 95 4 396 548 58 207 6.07e-15 75.9
Msa0880500 MtrunA17_Chr4g0054341 30.964 197 127 5 346 539 4 194 6.42e-16 78.6
Msa0880500 MtrunA17_Chr4g0054341 26.804 194 134 6 48 238 5 193 1.91e-12 68.2
Msa0880500 MtrunA17_Chr7g0268591 33.171 205 120 8 336 531 22 218 7.30e-16 78.6
Msa0880500 MtrunA17_Chr6g0459351 29.353 201 133 6 344 539 13 209 9.26e-16 77.8
Msa0880500 MtrunA17_Chr4g0044131 30.645 186 116 6 347 526 11 189 1.08e-15 77.8
Msa0880500 MtrunA17_Chr4g0044131 28.495 186 121 5 47 226 10 189 1.25e-15 77.8
Msa0880500 MtrunA17_Chr2g0287951 30.180 222 132 7 45 250 33 247 1.46e-15 78.2
Msa0880500 MtrunA17_Chr1g0191751 28.061 196 132 4 42 229 97 291 1.76e-15 78.6
Msa0880500 MtrunA17_Chr1g0191751 28.326 233 152 6 341 560 98 328 1.44e-13 72.4
Msa0880500 MtrunA17_Chr7g0272961 26.400 250 171 6 40 277 34 282 2.46e-15 77.0
Msa0880500 MtrunA17_Chr7g0272961 28.431 204 137 4 347 543 43 244 3.92e-12 67.4
Msa0880500 MtrunA17_Chr7g0239491 30.088 226 143 8 47 267 17 232 1.07e-14 74.7
Msa0880500 MtrunA17_Chr4g0028921 28.358 201 135 6 43 235 9 208 2.43e-14 73.9
Msa0880500 MtrunA17_Chr7g0239481 29.694 229 147 8 44 267 14 233 3.39e-14 73.2
Msa0880500 MtrunA17_Chr7g0239511 29.310 232 144 9 44 267 15 234 5.19e-14 72.8
Msa0880500 MtrunA17_Chr4g0045061 28.141 199 132 3 350 537 10 208 5.93e-14 75.1
Msa0880500 MtrunA17_Chr4g0045061 27.500 200 133 4 46 233 5 204 1.24e-13 73.9
Msa0880500 MtrunA17_Chr4g0028911 27.861 201 136 6 43 235 9 208 1.03e-13 72.0
Msa0880500 MtrunA17_Chr4g0045041 28.141 199 132 3 350 537 10 208 1.24e-13 73.9
Msa0880500 MtrunA17_Chr4g0045041 26.500 200 135 4 46 233 5 204 7.61e-13 71.6
Msa0880500 MtrunA17_Chr6g0459261 28.788 198 127 6 45 234 25 216 1.69e-13 71.2
Msa0880500 MtrunA17_Chr6g0459261 27.363 201 135 5 344 538 25 220 1.99e-12 68.2
Msa0880500 MtrunA17_Chr7g0266981 29.592 196 129 5 347 538 16 206 2.71e-13 70.9
Msa0880500 MtrunA17_Chr1g0171831 27.000 200 134 5 48 235 17 216 4.23e-13 69.7
Msa0880500 MtrunA17_Chr7g0270451 34.328 201 115 8 342 534 4 195 9.28e-13 68.9
Msa0880500 MtrunA17_Chr4g0044111 29.082 196 130 5 347 538 16 206 1.75e-12 68.2
Msa0880500 MtrunA17_Chr7g0239501 29.075 227 151 7 44 267 15 234 3.29e-12 67.4
Msa0880500 MtrunA17_Chr6g0459301 26.337 243 149 7 344 576 14 236 3.55e-12 67.4
Msa0880500 MtrunA17_Chr7g0267001 27.568 185 105 5 347 526 11 171 5.95e-12 66.2
Msa0880500 MtrunA17_Chr7g0266891 28.372 215 140 6 342 547 5 214 6.29e-12 66.6
Msa0880500 MtrunA17_Chr4g0040371 28.571 210 133 5 339 537 9 212 8.08e-12 66.2
Msa0880500 MtrunA17_Chr4g0040371 27.411 197 131 5 42 233 16 205 6.05e-11 63.9
Msa0880500 MtrunA17_Chr7g0252031 27.803 223 140 8 347 562 38 246 3.21e-11 64.7
Msa0880500 MtrunA17_Chr7g0259521 29.439 214 138 5 347 547 9 222 3.63e-11 64.3
Msa0880500 MtrunA17_Chr4g0074511 27.083 192 129 6 47 229 42 231 4.29e-11 64.3
Msa0880500 MtrunA17_Chr7g0247011 31.724 145 87 3 52 184 11 155 4.39e-11 64.3
Msa0880500 MtrunA17_Chr7g0239451 27.232 224 153 6 47 267 18 234 4.41e-11 63.9
Msa0880500 MtrunA17_Chr7g0259531 27.604 192 133 4 48 233 14 205 7.18e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0880500 AT5G50700.1 61.538 338 128 2 1 338 1 336 1.20e-140 413
Msa0880500 AT5G50700.1 48.519 270 126 3 341 598 42 310 1.16e-84 269
Msa0880500 AT5G50600.1 61.538 338 128 2 1 338 1 336 1.20e-140 413
Msa0880500 AT5G50600.1 48.519 270 126 3 341 598 42 310 1.16e-84 269
Msa0880500 AT5G50770.1 50.000 336 166 2 1 336 1 334 8.98e-107 326
Msa0880500 AT5G50770.1 46.067 267 131 3 341 595 42 307 4.39e-75 244
Msa0880500 AT3G47350.1 46.965 313 152 3 1 313 1 299 5.75e-97 300
Msa0880500 AT3G47350.1 49.630 270 131 2 342 609 42 308 1.23e-81 259
Msa0880500 AT5G50590.1 49.505 303 142 2 1 303 1 292 1.51e-94 293
Msa0880500 AT5G50590.1 50.980 255 116 3 341 590 42 292 9.10e-79 252
Msa0880500 AT5G50690.1 49.505 303 142 2 1 303 1 292 1.51e-94 293
Msa0880500 AT5G50690.1 50.980 255 116 3 341 590 42 292 9.10e-79 252
Msa0880500 AT3G47360.1 46.645 313 154 2 1 313 1 300 4.88e-92 287
Msa0880500 AT3G47360.1 49.259 270 132 4 342 609 43 309 3.31e-78 251
Msa0880500 AT4G10020.1 45.912 318 165 4 1 316 2 314 1.19e-87 278
Msa0880500 AT4G10020.1 44.569 267 138 4 336 593 39 304 5.88e-68 226
Msa0880500 AT3G47350.2 49.470 283 127 4 1 283 1 267 1.27e-86 273
Msa0880500 AT3G47350.2 51.121 223 104 2 342 562 42 261 1.62e-67 223
Msa0880500 AT5G50590.2 53.975 239 110 0 1 239 1 239 5.97e-81 256
Msa0880500 AT5G50590.2 56.250 192 83 1 340 531 41 231 4.08e-66 217
Msa0880500 AT5G50690.2 53.975 239 110 0 1 239 1 239 5.97e-81 256
Msa0880500 AT5G50690.2 56.250 192 83 1 340 531 41 231 4.08e-66 217
Msa0880500 AT3G47350.3 38.978 313 133 4 1 313 1 255 1.79e-68 224
Msa0880500 AT3G47350.3 42.222 270 107 3 342 609 42 264 1.47e-56 192
Msa0880500 AT3G03330.1 35.088 228 135 7 17 231 6 233 6.17e-24 103
Msa0880500 AT3G03330.1 35.238 210 125 7 330 531 27 233 2.74e-18 87.0
Msa0880500 AT5G65205.1 34.211 190 111 7 49 233 10 190 1.98e-21 95.5
Msa0880500 AT5G65205.1 30.244 205 132 5 348 549 10 206 1.81e-16 80.9
Msa0880500 AT5G10050.1 31.606 193 122 5 49 238 9 194 2.93e-21 94.7
Msa0880500 AT5G10050.1 31.373 204 126 6 348 548 9 201 5.22e-20 90.9
Msa0880500 AT1G49670.2 35.204 196 116 4 350 534 10 205 2.66e-18 89.4
Msa0880500 AT1G49670.2 24.490 196 136 3 52 235 11 206 1.73e-12 70.9
Msa0880500 AT1G49670.1 35.204 196 116 4 350 534 10 205 2.90e-18 89.4
Msa0880500 AT1G49670.1 24.490 196 136 3 52 235 11 206 1.85e-12 70.9
Msa0880500 AT1G63380.2 28.934 197 132 5 48 236 25 221 1.90e-16 80.9
Msa0880500 AT1G63380.2 25.792 221 152 8 332 541 7 226 4.32e-11 64.7
Msa0880500 AT1G24360.1 28.718 195 134 5 43 234 72 264 1.90e-16 81.3
Msa0880500 AT1G24360.1 30.622 209 135 7 348 550 78 282 4.90e-14 73.9
Msa0880500 AT3G05260.1 29.798 198 125 7 40 227 31 224 1.95e-16 80.9
Msa0880500 AT3G05260.1 28.270 237 149 6 324 542 6 239 3.32e-13 71.2
Msa0880500 AT1G54870.2 29.648 199 129 6 40 229 78 274 2.21e-16 81.3
Msa0880500 AT1G54870.2 29.297 256 155 8 347 588 87 330 5.69e-14 73.9
Msa0880500 AT1G54870.1 29.648 199 129 6 40 229 76 272 2.37e-16 81.3
Msa0880500 AT1G54870.1 29.297 256 155 8 347 588 85 328 6.34e-14 73.9
Msa0880500 AT1G63380.3 28.934 197 132 5 48 236 18 214 2.61e-16 80.1
Msa0880500 AT1G63380.4 28.934 197 132 5 48 236 22 218 3.24e-16 80.1
Msa0880500 AT1G63380.1 28.934 197 132 5 48 236 20 216 3.30e-16 79.7
Msa0880500 AT3G12800.1 30.594 219 129 6 40 243 5 215 3.69e-16 80.1
Msa0880500 AT3G51680.1 32.487 197 119 6 347 533 35 227 5.94e-16 79.3
Msa0880500 AT1G62610.2 28.934 197 132 5 48 236 16 212 2.27e-15 77.4
Msa0880500 AT1G62610.1 28.934 197 132 5 48 236 17 213 2.39e-15 77.4
Msa0880500 AT1G62610.3 28.934 197 132 5 48 236 18 214 2.47e-15 77.4
Msa0880500 AT1G62610.4 28.934 197 132 5 48 236 22 218 3.01e-15 77.0
Msa0880500 AT3G55310.1 28.000 200 127 6 48 235 20 214 4.30e-14 73.6
Msa0880500 AT3G55310.1 26.733 202 140 5 347 541 20 220 1.69e-12 68.9
Msa0880500 AT4G05530.1 26.154 195 130 5 41 229 5 191 1.01e-13 72.0
Msa0880500 AT2G17845.1 27.500 200 133 6 48 236 50 248 1.54e-13 72.4
Msa0880500 AT3G26770.1 28.571 203 136 6 341 539 38 235 1.86e-13 72.0
Msa0880500 AT3G26770.1 28.426 197 131 6 43 234 39 230 2.12e-11 65.9
Msa0880500 AT2G29150.1 30.736 231 137 9 44 267 15 229 2.41e-13 71.2
Msa0880500 AT5G06060.1 29.680 219 136 8 343 550 8 219 2.62e-13 70.9
Msa0880500 AT5G06060.1 27.948 229 147 8 44 267 8 223 4.67e-13 70.1
Msa0880500 AT3G55290.2 28.061 196 134 5 48 236 20 215 3.10e-13 70.9
Msa0880500 AT3G55290.1 28.061 196 134 5 48 236 21 216 3.32e-13 70.9
Msa0880500 AT1G52340.1 30.198 202 130 6 347 541 21 218 1.77e-12 68.9
Msa0880500 AT2G29360.1 30.317 221 131 8 44 247 15 229 1.79e-12 68.6
Msa0880500 AT3G46170.1 27.041 196 136 5 48 236 29 224 1.98e-12 68.6
Msa0880500 AT4G13180.1 25.764 229 149 6 45 255 13 238 4.71e-12 67.4
Msa0880500 AT4G03140.1 33.908 174 102 7 347 515 81 246 5.70e-12 68.2
Msa0880500 AT2G29290.2 30.493 223 133 9 52 267 14 221 5.82e-12 67.0
Msa0880500 AT3G26760.1 31.188 202 122 7 347 540 39 231 7.04e-12 67.4
Msa0880500 AT3G26760.1 25.980 204 143 5 35 234 26 225 9.89e-11 63.9
Msa0880500 AT5G18210.1 26.180 233 148 7 44 255 7 236 7.66e-12 66.6
Msa0880500 AT1G24470.1 29.741 232 139 13 15 233 22 242 8.49e-12 67.0
Msa0880500 AT3G06060.1 31.034 203 114 7 52 238 44 236 8.59e-12 67.4
Msa0880500 AT3G06060.2 31.034 203 114 7 52 238 61 253 9.53e-12 67.4
Msa0880500 AT1G67730.1 25.746 268 173 13 16 261 12 275 1.16e-11 66.6
Msa0880500 AT5G18210.2 26.180 233 148 7 44 255 7 236 1.27e-11 66.2
Msa0880500 AT3G04000.1 27.670 206 135 5 42 233 11 216 1.38e-11 65.9
Msa0880500 AT2G29370.1 28.384 229 146 7 44 267 15 230 3.00e-11 64.7
Msa0880500 AT4G24050.2 29.302 215 118 8 52 237 39 248 3.38e-11 64.7
Msa0880500 AT2G47130.1 28.358 201 134 5 347 544 9 202 4.37e-11 64.3
Msa0880500 AT4G24050.1 29.302 215 118 8 52 237 39 248 6.96e-11 64.7
Msa0880500 AT5G19200.1 29.949 197 121 6 50 235 40 230 7.56e-11 64.3
Msa0880500 AT3G03980.1 26.829 205 137 5 42 233 11 215 7.87e-11 63.5

Find 166 sgRNAs with CRISPR-Local

Find 650 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCAACAAACGGTTCTAATT+TGG 0.141257 6_1:+27189058 Msa0880500:three_prime_UTR
CAAGAAAACACATTTCATTT+AGG 0.152230 6_1:+27189029 Msa0880500:three_prime_UTR
GTAAATAATGCTGGAATTAT+TGG 0.187644 6_1:+27187810 Msa0880500:CDS
TCCCCTGATGTTATCATTAT+TGG 0.195093 6_1:+27187628 Msa0880500:CDS
TACATTATATATACTCCTTC+TGG 0.214734 6_1:-27180347 None:intergenic
TTGCTAGGTGCTTCTCTTGC+TGG 0.240546 6_1:-27180949 None:intergenic
GTCTAAATACACACAAATTA+TGG 0.246179 6_1:+27187866 Msa0880500:CDS
GTCACTTGTTGACATTAAAA+TGG 0.249790 6_1:+27187564 Msa0880500:CDS
TAAATAATGCTGGAATTATT+GGG 0.259768 6_1:+27187811 Msa0880500:CDS
CTAATCACTGGAGCAGCTTC+TGG 0.259839 6_1:+27187133 Msa0880500:CDS
TCCTTTCATCAATTGATTCT+TGG 0.265350 6_1:+27180314 Msa0880500:CDS
AAGAAAACACATTTCATTTA+GGG 0.271925 6_1:+27189030 Msa0880500:three_prime_UTR
GATGAAACCGTTAACCATTT+TGG 0.281093 6_1:+27179941 Msa0880500:CDS
ATTGAACTTGGTTGGTCTAT+TGG 0.282291 6_1:+27188676 Msa0880500:CDS
GCTGATAGAGCTCGTGATTT+TGG 0.286452 6_1:+27179854 Msa0880500:CDS
TTTCTCAGGAAACAAACTTC+TGG 0.287027 6_1:+27188356 Msa0880500:intron
TCAAAACAGACCTGGCATTC+AGG 0.295225 6_1:+27188725 Msa0880500:CDS
AAACCCCACTCCAACAATTC+TGG 0.298326 6_1:-27180892 None:intergenic
TGGACCCAACGACACATCTT+TGG 0.322629 6_1:+27188913 Msa0880500:CDS
TTTCTAAAGTTGATGATTGT+AGG 0.326151 6_1:+27179909 Msa0880500:CDS
TTTGGTAGGACACAAACTTT+TGG 0.338368 6_1:+27180227 Msa0880500:intron
CAATAAGACAGTGTGATAAA+AGG 0.349024 6_1:-27189114 None:intergenic
AGGGAAGAATGTAAAGATAA+TGG 0.356930 6_1:-27179613 None:intergenic
CATACATACGTCTACCAAAA+TGG 0.358019 6_1:-27179955 None:intergenic
ACTGGAGCAGCTTCTGGAAT+TGG 0.358733 6_1:+27187139 Msa0880500:CDS
AAGAATTTGAAGGTCCAATA+TGG 0.365021 6_1:-27179585 None:intergenic
TTCTCAGGAAACAAACTTCT+GGG 0.368129 6_1:+27188357 Msa0880500:intron
ATTGCCACCAGAAGGCAAAA+TGG 0.369505 6_1:+27180611 Msa0880500:CDS
TCTAGTAGCAGTGGCTGATA+TGG 0.371464 6_1:+27187591 Msa0880500:CDS
GGACCCAACGACACATCTTT+GGG 0.376556 6_1:+27188914 Msa0880500:CDS
GTTGGTGCGAACAGAAAATA+TGG 0.382305 6_1:+27187096 Msa0880500:CDS
TTGTTACATCTCTCATATCT+TGG 0.383129 6_1:-27180641 None:intergenic
TTCTTCCCTGAAAATGTTGC+TGG 0.384509 6_1:+27179627 Msa0880500:CDS
CATTGAAGATGAGGCTACTC+TGG 0.388998 6_1:+27188750 Msa0880500:CDS
CAAGAGTTACCAAGAGCTTA+AGG 0.391355 6_1:+27188981 Msa0880500:CDS
GTTTCATGCAGTGGATCATC+TGG 0.391549 6_1:+27187788 Msa0880500:intron
TTTATTCTACCTTAAGCTCT+TGG 0.393929 6_1:-27188990 None:intergenic
CTTAAGCTCTTGGTAACTCT+TGG 0.396197 6_1:-27188980 None:intergenic
ATGCATTACAGTGGATCATT+TGG 0.398219 6_1:+27180052 Msa0880500:intron
TAAGCAGATTATCATTCTTC+CGG 0.400439 6_1:-27188954 None:intergenic
GGTTCAGGAACTTATGAATA+AGG 0.407519 6_1:-27179515 None:intergenic
TAGATACTGAGTCTCGGAAT+TGG 0.408361 6_1:-27188469 None:intergenic
CACATCACTGGTGCTTCCTC+TGG 0.411745 6_1:+27179660 Msa0880500:CDS
TGTATGTGACAAACCCTTCA+TGG 0.413786 6_1:+27188842 Msa0880500:CDS
ACTGGTGCTTCCTCTGGTAT+TGG 0.420526 6_1:+27179666 Msa0880500:CDS
TGCACCTTTCACTATGTCCT+TGG 0.421028 6_1:-27188806 None:intergenic
TGGCAATAAGACTTTGCCTT+TGG 0.423226 6_1:-27180595 None:intergenic
AGTTGATGATTGTAGGCGTT+TGG 0.425267 6_1:+27179916 Msa0880500:CDS
GCACCAATAATGATAACATC+AGG 0.433269 6_1:-27187631 None:intergenic
CGTTTAAGATATATTAAAGA+AGG 0.434088 6_1:-27189381 None:intergenic
GCTGATATGGCAAGGTCTCT+TGG 0.434769 6_1:+27187604 Msa0880500:CDS
CCATAGCTGCCTTGCAAATG+AGG 0.434832 6_1:-27189481 None:intergenic
TTTATCCCCACCTGGTGGAC+TGG 0.435024 6_1:+27188893 Msa0880500:CDS
ACATTATATATACTCCTTCT+GGG 0.435152 6_1:-27180346 None:intergenic
AATATTACTTTGACCCATGA+AGG 0.435612 6_1:-27188856 None:intergenic
CCTCATTTGCAAGGCAGCTA+TGG 0.435684 6_1:+27189481 Msa0880500:three_prime_UTR
CCGCTTACTGTCTTCAACCT+TGG 0.441439 6_1:-27187662 None:intergenic
ACGTCTACCAAAATGGTTAA+CGG 0.443115 6_1:-27179948 None:intergenic
TCCAATATGGTGGTAAGAAA+AGG 0.443917 6_1:-27179572 None:intergenic
GAAAAGGAGTAAGGAAAAGA+AGG 0.450873 6_1:-27179556 None:intergenic
AAAGGTACATGCTAATTAAA+CGG 0.451226 6_1:-27189096 None:intergenic
AATGATATATCAGGCTAGTA+AGG 0.453299 6_1:+27188621 Msa0880500:intron
TCCAAATTAGAACCGTTTGT+TGG 0.453568 6_1:-27189059 None:intergenic
CAAAACAGACCTGGCATTCA+GGG 0.453872 6_1:+27188726 Msa0880500:CDS
AGTAAGGAAAAGAAGGTGAA+TGG 0.457421 6_1:-27179549 None:intergenic
CTTCAATGACCCTGAATGCC+AGG 0.457896 6_1:-27188735 None:intergenic
AGATTATCATTCTTCCGGTA+AGG 0.458492 6_1:-27188949 None:intergenic
GATCATCTGGTAAATAATGC+TGG 0.468710 6_1:+27187801 Msa0880500:CDS
AGAAAAGTTGTACTAATCAC+TGG 0.477822 6_1:+27187121 Msa0880500:CDS
ATGGAGGAGCTACTAGGTTC+AGG 0.479762 6_1:-27179530 None:intergenic
CTTTAAGAATTGAACTTGGT+TGG 0.480366 6_1:+27188668 Msa0880500:CDS
TACTCTGGGAAGACTTCCAT+TGG 0.485275 6_1:+27188765 Msa0880500:CDS
TGAGGTGTGGTAAAGCAAAA+CGG 0.485877 6_1:-27180267 None:intergenic
GTGTCCAGAATTGTTGGAGT+GGG 0.486451 6_1:+27180888 Msa0880500:CDS
TTGCCACCAGAAGGCAAAAT+GGG 0.488945 6_1:+27180612 Msa0880500:CDS
GGCATAACAATTGCCACACC+TGG 0.489859 6_1:+27188697 Msa0880500:CDS
TGGGGTTCCAAGGTTGGTAG+AGG 0.491125 6_1:+27187830 Msa0880500:CDS
TATATACTCCTTCTGGGTGC+AGG 0.491452 6_1:-27180340 None:intergenic
ACATAGTGAAAGGTGCATGC+AGG 0.491624 6_1:+27188812 Msa0880500:CDS
GAGCTCTATCAGCAACTTCA+CGG 0.495626 6_1:-27179844 None:intergenic
GATTATCATTCTTCCGGTAA+GGG 0.496088 6_1:-27188948 None:intergenic
AAGTCTTTATGAAACATTGA+GGG 0.498519 6_1:+27180509 Msa0880500:CDS
TGGTGGTAAGAAAAGGAGTA+AGG 0.505040 6_1:-27179565 None:intergenic
TGTGGTGAAAAGAGGAGGAT+TGG 0.506284 6_1:-27189326 None:intergenic
CCTCTGCTGTTTCTGAGGTG+TGG 0.510515 6_1:-27180280 None:intergenic
CTGGAATTATTGGGGTTCCA+AGG 0.514905 6_1:+27187820 Msa0880500:CDS
GCACGCATTATAATAACATC+AGG 0.515853 6_1:-27179881 None:intergenic
GTTTAAGATATATTAAAGAA+GGG 0.516057 6_1:-27189380 None:intergenic
TAGCTTTAAATTACCATGAG+AGG 0.516356 6_1:-27180140 None:intergenic
GAAACATTGAGGGTTGAAGT+TGG 0.516747 6_1:+27180519 Msa0880500:CDS
ACTCTGGGAAGACTTCCATT+GGG 0.519855 6_1:+27188766 Msa0880500:CDS
ATGGTACATTGAGGGGAGAT+AGG 0.520717 6_1:+27180815 Msa0880500:CDS
GAGGTGTGGTAAAGCAAAAC+GGG 0.520958 6_1:-27180266 None:intergenic
TACCATGAGAGGTCTCCAAT+TGG 0.521548 6_1:-27180129 None:intergenic
AGTGTTGTGTCCAGAATTGT+TGG 0.521927 6_1:+27180882 Msa0880500:CDS
AGGTGAATGGAGGAGCTACT+AGG 0.526268 6_1:-27179536 None:intergenic
AATCCCAAAGATGTGTCGTT+GGG 0.526397 6_1:-27188917 None:intergenic
CATAGTGAAAGGTGCATGCA+GGG 0.526660 6_1:+27188813 Msa0880500:CDS
AATGGAAAGGAAGAATTTGA+AGG 0.527999 6_1:-27179595 None:intergenic
ATAGTCGTTGCTTCAGCTTG+TGG 0.530720 6_1:+27188439 Msa0880500:CDS
TCGTTGCTTCAGCTTGTGGA+TGG 0.531934 6_1:+27188443 Msa0880500:CDS
GTCGTTGGGTCCAGTCCACC+AGG 0.532099 6_1:-27188903 None:intergenic
AATAGTGAATGGTACATTGA+GGG 0.532567 6_1:+27180807 Msa0880500:CDS
ACCAGAAGGCAAAATGGGCG+TGG 0.534597 6_1:+27180617 Msa0880500:CDS
TTAGGGACTTAGCCAACAAA+CGG 0.537764 6_1:+27189047 Msa0880500:three_prime_UTR
TTGGGTCCAGTCCACCAGGT+GGG 0.538985 6_1:-27188899 None:intergenic
GGTGAAAAGAGGAGGATTGG+TGG 0.540680 6_1:-27189323 None:intergenic
GAGACTTTAAGAATTGAACT+TGG 0.549331 6_1:+27188664 Msa0880500:CDS
AAATCCCAAAGATGTGTCGT+TGG 0.552388 6_1:-27188918 None:intergenic
GGTAAAGTTGTTCACATCAC+TGG 0.554581 6_1:+27179648 Msa0880500:CDS
AATTCAGATTCTATGTAACC+TGG 0.554617 6_1:-27180570 None:intergenic
AATTATTGGGGTTCCAAGGT+TGG 0.558074 6_1:+27187824 Msa0880500:CDS
ATGTAACTGATATCACCAAT+TGG 0.561569 6_1:+27180114 Msa0880500:CDS
TAAGTCTTTATGAAACATTG+AGG 0.565380 6_1:+27180508 Msa0880500:CDS
CACCAATTGGAGACCTCTCA+TGG 0.567087 6_1:+27180127 Msa0880500:CDS
AAATAATGCTGGAATTATTG+GGG 0.573354 6_1:+27187812 Msa0880500:CDS
TCCAAGAATCAATTGATGAA+AGG 0.573578 6_1:-27180315 None:intergenic
CAATAGTGAATGGTACATTG+AGG 0.574939 6_1:+27180806 Msa0880500:CDS
CATTCACTCACTGATCCCAC+TGG 0.576814 6_1:-27180775 None:intergenic
GAAGGTGCTTTATCCCCACC+TGG 0.576932 6_1:+27188885 Msa0880500:CDS
GTATGTGACAAACCCTTCAT+GGG 0.577043 6_1:+27188843 Msa0880500:CDS
CACCAATAATGATAACATCA+GGG 0.577672 6_1:-27187630 None:intergenic
AGTTACATCTTCAAACATCA+TGG 0.578048 6_1:-27180099 None:intergenic
ATATTACTTTGACCCATGAA+GGG 0.580640 6_1:-27188855 None:intergenic
AACTTCTGGGGAGCAGCTCG+TGG 0.582009 6_1:+27188370 Msa0880500:CDS
CTTGGATGCCTGCACCCAGA+AGG 0.586038 6_1:+27180332 Msa0880500:CDS
TATGTCATTCTAAACCATGC+TGG 0.590361 6_1:-27180850 None:intergenic
TGTGCAAAATCAATAGTGAA+TGG 0.591847 6_1:+27180796 Msa0880500:CDS
ATTGAAGATGAGGCTACTCT+GGG 0.592222 6_1:+27188751 Msa0880500:CDS
TGCTTCCTCTGGTATTGGAG+AGG 0.597134 6_1:+27179671 Msa0880500:CDS
TGAAGTGAGTGCAACTCCAG+TGG 0.598795 6_1:+27180759 Msa0880500:CDS
GGTATTTGACTGCACCAGCA+TGG 0.600958 6_1:+27180836 Msa0880500:CDS
ACGTTATAGATACTGAGTCT+CGG 0.601954 6_1:-27188475 None:intergenic
ATTCAGGGTCATTGAAGATG+AGG 0.603172 6_1:+27188741 Msa0880500:CDS
TGTCCAGAATTGTTGGAGTG+GGG 0.604050 6_1:+27180889 Msa0880500:CDS
AAGGAAAAGAAGGTGAATGG+AGG 0.605287 6_1:-27179546 None:intergenic
AATGGAGAATCTAGTAGCAG+TGG 0.606093 6_1:+27187582 Msa0880500:CDS
TCTCAGGAAACAAACTTCTG+GGG 0.608091 6_1:+27188358 Msa0880500:intron
AAAGTCTTATTGCCACCAGA+AGG 0.611122 6_1:+27180603 Msa0880500:CDS
TGGGTCCAGTCCACCAGGTG+GGG 0.616076 6_1:-27188898 None:intergenic
GAAGTGAGTGCAACTCCAGT+GGG 0.616438 6_1:+27180760 Msa0880500:CDS
TTCATCAGTTGAATGTGCCA+AGG 0.618817 6_1:+27188789 Msa0880500:CDS
AGCAGCTTCTGGAATTGGCG+AGG 0.622046 6_1:+27187144 Msa0880500:CDS
GTCACGCACATCGTTCAAAG+TGG 0.625407 6_1:-27187705 None:intergenic
TGTGTCCAGAATTGTTGGAG+TGG 0.626150 6_1:+27180887 Msa0880500:CDS
AAACAGCAGAGGCAAAATTG+TGG 0.631748 6_1:+27180291 Msa0880500:CDS
ATAGAATCTGAATTAACCAA+AGG 0.631775 6_1:+27180579 Msa0880500:CDS
GGTGCTTTATCCCCACCTGG+TGG 0.631992 6_1:+27188888 Msa0880500:CDS
TAGCAGTGGCTGATATGGCA+AGG 0.633184 6_1:+27187596 Msa0880500:CDS
ATAGTGAATGGTACATTGAG+GGG 0.634116 6_1:+27180808 Msa0880500:CDS
CCAAGGTTGAAGACAGTAAG+CGG 0.640572 6_1:+27187662 Msa0880500:CDS
GGTGTAACAATTGTTACACC+AGG 0.641548 6_1:+27180552 Msa0880500:CDS
CATTCAACTGATGAACCCAA+TGG 0.642419 6_1:-27188781 None:intergenic
AGAATGTAAAGATAATGGAA+AGG 0.645582 6_1:-27179608 None:intergenic
GTTGGGTCCAGTCCACCAGG+TGG 0.645605 6_1:-27188900 None:intergenic
ATAGTAGTACCTCATTTGCA+AGG 0.648988 6_1:+27189472 Msa0880500:three_prime_UTR
GCTTACGAGTATGCTAAGAG+AGG 0.664397 6_1:+27179782 Msa0880500:CDS
AATTTGAAGGTCCAATATGG+TGG 0.665878 6_1:-27179582 None:intergenic
GTTGAAGTTGGAGCAGACGT+AGG 0.674435 6_1:+27180531 Msa0880500:CDS
ACCAATAATGATAACATCAG+GGG 0.676766 6_1:-27187629 None:intergenic
ATAGTGAAAGGTGCATGCAG+GGG 0.678255 6_1:+27188814 Msa0880500:CDS
AGTATGCTAGACGAGGAGCA+AGG 0.694009 6_1:+27187539 Msa0880500:CDS
CCACACCTCAGAAACAGCAG+AGG 0.715008 6_1:+27180280 Msa0880500:CDS
TGTGCCAAGGACATAGTGAA+AGG 0.715969 6_1:+27188802 Msa0880500:CDS
GCTTATGAGTATGCTAGACG+AGG 0.721771 6_1:+27187532 Msa0880500:CDS
TATTGGTGCAGATGTGACCA+AGG 0.724737 6_1:+27187645 Msa0880500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATTATTTAAAAA+AGG + chr6_1:27182548-27182567 Msa0880500:intron 0.0%
!! TATATATATTATTTAAAAAA+GGG + chr6_1:27182549-27182568 Msa0880500:intron 0.0%
!! AATAAATAAATAAAATAATA+TGG + chr6_1:27185298-27185317 Msa0880500:intron 0.0%
!! GATTAATTAATATTTGTTTA+AGG - chr6_1:27179996-27180015 None:intergenic 10.0%
!!! CTTAAACATTTTATATTAAT+AGG - chr6_1:27181199-27181218 None:intergenic 10.0%
!! TTCTTCTAATAAAATAATAT+TGG + chr6_1:27181857-27181876 Msa0880500:intron 10.0%
!! TCTTCTAATAAAATAATATT+GGG + chr6_1:27181858-27181877 Msa0880500:intron 10.0%
!! TTGAGTAAATAAATATTATT+GGG - chr6_1:27182067-27182086 None:intergenic 10.0%
!! TTTGAGTAAATAAATATTAT+TGG - chr6_1:27182068-27182087 None:intergenic 10.0%
!!! TTGATGTTTTTTTAAAATAA+GGG - chr6_1:27183061-27183080 None:intergenic 10.0%
!!! TTTGATGTTTTTTTAAAATA+AGG - chr6_1:27183062-27183081 None:intergenic 10.0%
!!! AAATTTTGAGAATTTAATTA+TGG - chr6_1:27183909-27183928 None:intergenic 10.0%
!!! TTTCAGATTTTTTTTTTAAA+GGG - chr6_1:27184674-27184693 None:intergenic 10.0%
!!! AGAAATATTTTATTTTGTTT+TGG - chr6_1:27185583-27185602 None:intergenic 10.0%
!! AATTGCTTATTTATATAAAA+AGG + chr6_1:27187074-27187093 Msa0880500:intron 10.0%
!! ATAAATAAATTAACAAAGAA+AGG - chr6_1:27187497-27187516 None:intergenic 10.0%
!! AACAAAAAAAATTATATGAT+GGG + chr6_1:27187757-27187776 Msa0880500:intron 10.0%
!!! CATTTTTTTTAAATAAAAAG+AGG + chr6_1:27189284-27189303 Msa0880500:three_prime_UTR 10.0%
!!! ATTTTAATTTTTGTAGCATT+TGG + chr6_1:27179760-27179779 Msa0880500:intron 15.0%
!! ATCATTACTCTTTATATTAT+AGG - chr6_1:27181290-27181309 None:intergenic 15.0%
!!! CTAAAATTTCACTTTATTTA+AGG + chr6_1:27181512-27181531 Msa0880500:intron 15.0%
!!! TTTAATTTTCATAAATTTGC+CGG - chr6_1:27182206-27182225 None:intergenic 15.0%
!!! TTTATGAAAATTAAAGTGTT+TGG + chr6_1:27182211-27182230 Msa0880500:intron 15.0%
!! AAATCATTTATTGAAATGTA+AGG - chr6_1:27182617-27182636 None:intergenic 15.0%
!!! TTTTAAAATAAGGGTAAAAT+TGG - chr6_1:27183052-27183071 None:intergenic 15.0%
!! ATTCAAAGGAAAAAAAAAAA+AGG - chr6_1:27184060-27184079 None:intergenic 15.0%
!! AAAACATTTATTGAAATGTA+AGG + chr6_1:27184600-27184619 Msa0880500:intron 15.0%
!!! CTTTCAGATTTTTTTTTTAA+AGG - chr6_1:27184675-27184694 None:intergenic 15.0%
!! TTTCTGTAAAATATAAAACA+CGG + chr6_1:27185044-27185063 Msa0880500:intron 15.0%
!!! AATATTTTATTTTGTTTTGG+AGG - chr6_1:27185580-27185599 None:intergenic 15.0%
!! ATATTTATTATAAATAGGAC+TGG + chr6_1:27186512-27186531 Msa0880500:intron 15.0%
!! TATGAAAAATCTAATTGATA+TGG + chr6_1:27187297-27187316 Msa0880500:intron 15.0%
!!! TGTACTATAAAGTTTTTTAT+TGG - chr6_1:27187346-27187365 None:intergenic 15.0%
!! GAACAAAAAAAATTATATGA+TGG + chr6_1:27187756-27187775 Msa0880500:intron 15.0%
!! TTATTAACAAATAACAATGT+TGG + chr6_1:27187970-27187989 Msa0880500:intron 15.0%
!!! TGGAACTTTATTTAAAATTA+TGG + chr6_1:27188143-27188162 Msa0880500:intron 15.0%
!!! TACATTTTTTTTAAGTTCAA+GGG + chr6_1:27189188-27189207 Msa0880500:three_prime_UTR 15.0%
!!! GTTTAAGATATATTAAAGAA+GGG - chr6_1:27189383-27189402 None:intergenic 15.0%
!!! TAATTATTTGCTGTGTATTT+TGG + chr6_1:27180209-27180228 Msa0880500:intron 20.0%
!!! TTTAATTTACCTAGTAATAC+AGG + chr6_1:27180681-27180700 Msa0880500:intron 20.0%
!! TGTTATGATGATATAAATGT+AGG + chr6_1:27180735-27180754 Msa0880500:intron 20.0%
!! TAGAGAGAAAAAAAAAACAA+AGG - chr6_1:27181261-27181280 None:intergenic 20.0%
!! AAACCTACATAAAAATATGT+TGG + chr6_1:27181581-27181600 Msa0880500:intron 20.0%
!!! TTTCCAACATATTTTTATGT+AGG - chr6_1:27181587-27181606 None:intergenic 20.0%
!!! CTTCATTTCTTTTTGAAAAA+TGG - chr6_1:27181617-27181636 None:intergenic 20.0%
!!! TAATGACTTTAATTTGAAGT+AGG + chr6_1:27181680-27181699 Msa0880500:intron 20.0%
!! TAAAAAAATAGGCTTATGAA+AGG + chr6_1:27181729-27181748 Msa0880500:intron 20.0%
!!! AAAGTTTTTAAAACCCAAAA+AGG + chr6_1:27182128-27182147 Msa0880500:intron 20.0%
!!! AGTCATTTTTGAATTTGTAA+CGG + chr6_1:27182261-27182280 Msa0880500:intron 20.0%
!!! GTAGCGTAAAATAATTATTT+TGG - chr6_1:27182427-27182446 None:intergenic 20.0%
!! AAAAGGGTTAAATATGTTAT+TGG + chr6_1:27182565-27182584 Msa0880500:intron 20.0%
!!! CAATTTTTTTTTGTTGATAC+CGG + chr6_1:27182722-27182741 Msa0880500:intron 20.0%
!! AAAAAAATCACCAACAAAAT+GGG - chr6_1:27182804-27182823 None:intergenic 20.0%
!! AAAAAAAATCACCAACAAAA+TGG - chr6_1:27182805-27182824 None:intergenic 20.0%
!!! TTTTTTATCAGCCAATATAT+TGG + chr6_1:27182822-27182841 Msa0880500:intron 20.0%
!! TTTGGATAAGTTAAAACTAA+CGG + chr6_1:27182868-27182887 Msa0880500:intron 20.0%
!!! TAATTTTTCATTCCATTGTT+TGG + chr6_1:27182989-27183008 Msa0880500:intron 20.0%
!! AAGCAAAAATTTATTGGTAA+AGG + chr6_1:27183281-27183300 Msa0880500:intron 20.0%
!! AAAATTGGGAATGAAAAATA+AGG + chr6_1:27183446-27183465 Msa0880500:intron 20.0%
!!! ATTGTTTGGTTTTGTAAATA+AGG - chr6_1:27183602-27183621 None:intergenic 20.0%
!! TTATTTACAAAACCAAACAA+TGG + chr6_1:27183601-27183620 Msa0880500:intron 20.0%
!! AATCTTATCATATAACGTTA+TGG - chr6_1:27183855-27183874 None:intergenic 20.0%
!!! AACGTTATATGATAAGATTT+TGG + chr6_1:27183856-27183875 Msa0880500:intron 20.0%
!! GAAAAAAAAAAAAGGAAAAG+TGG - chr6_1:27184052-27184071 None:intergenic 20.0%
!! AAATTTCAAAAGAAATAAGC+TGG - chr6_1:27184115-27184134 None:intergenic 20.0%
!! ATTTACATTCATTTAATGTG+TGG + chr6_1:27184438-27184457 Msa0880500:intron 20.0%
!! TTTACATTCATTTAATGTGT+GGG + chr6_1:27184439-27184458 Msa0880500:intron 20.0%
!! ATGTAAGGACTATTTATTAA+AGG + chr6_1:27184615-27184634 Msa0880500:intron 20.0%
!! GAGATAAAAATGTCATAAAA+TGG + chr6_1:27185007-27185026 Msa0880500:intron 20.0%
!!! TCTAATTTTAAAGTCGAAAT+AGG + chr6_1:27185600-27185619 Msa0880500:intron 20.0%
!!! ATCTCTCTTTTATTTAGTAT+TGG + chr6_1:27185785-27185804 Msa0880500:intron 20.0%
!!! TCTCTCTTTTATTTAGTATT+GGG + chr6_1:27185786-27185805 Msa0880500:intron 20.0%
!! TGTAAAACGACATATAATTT+AGG - chr6_1:27186155-27186174 None:intergenic 20.0%
!! AAATAACACTAATGTTTCAT+TGG - chr6_1:27186181-27186200 None:intergenic 20.0%
!! ATCATGTGTAAAATGATTAT+AGG - chr6_1:27186706-27186725 None:intergenic 20.0%
!!! TTTTTGCTTATATTAGTAAC+CGG - chr6_1:27186747-27186766 None:intergenic 20.0%
!!! GTGATTTCATTTTTCATTTT+TGG + chr6_1:27186936-27186955 Msa0880500:intron 20.0%
!! GCTTATTTATATAAAAAGGT+TGG + chr6_1:27187078-27187097 Msa0880500:intron 20.0%
!!! TTTGCTCTATTATTTTGTTT+TGG + chr6_1:27187176-27187195 Msa0880500:intron 20.0%
!!! TTTGAGTTAATTTTGACTTA+TGG - chr6_1:27187249-27187268 None:intergenic 20.0%
!! TAAATAATGCTGGAATTATT+GGG + chr6_1:27187811-27187830 Msa0880500:CDS 20.0%
!! GAGTATAATTTACATATACA+TGG + chr6_1:27188088-27188107 Msa0880500:intron 20.0%
!! ATGTTGTAAAGAAACAAAAA+CGG + chr6_1:27188245-27188264 Msa0880500:intron 20.0%
!!! ATAATAATAATTAAGAGCAC+CGG - chr6_1:27188280-27188299 None:intergenic 20.0%
!! GCTCTTAATTATTATTATCA+TGG + chr6_1:27188282-27188301 Msa0880500:intron 20.0%
!!! CTTTACTATTTTTAAGATGT+GGG - chr6_1:27188411-27188430 None:intergenic 20.0%
!!! CAAAGTAATATTTTATTGGA+AGG + chr6_1:27188867-27188886 Msa0880500:CDS 20.0%
!! AAGAAAACACATTTCATTTA+GGG + chr6_1:27189030-27189049 Msa0880500:three_prime_UTR 20.0%
!!! GTACATTTTTTTTAAGTTCA+AGG + chr6_1:27189187-27189206 Msa0880500:three_prime_UTR 20.0%
!!! ACATTTTTTTTAAGTTCAAG+GGG + chr6_1:27189189-27189208 Msa0880500:three_prime_UTR 20.0%
!!! TAAAATCAGTAGTTTTTTTG+GGG - chr6_1:27189227-27189246 None:intergenic 20.0%
!!! CTAAAATCAGTAGTTTTTTT+GGG - chr6_1:27189228-27189247 None:intergenic 20.0%
!!! ACTAAAATCAGTAGTTTTTT+TGG - chr6_1:27189229-27189248 None:intergenic 20.0%
!!! CGTTTAAGATATATTAAAGA+AGG - chr6_1:27189384-27189403 None:intergenic 20.0%
!!! AGAATGTAAAGATAATGGAA+AGG - chr6_1:27179611-27179630 None:intergenic 25.0%
!!! TTTCTAAAGTTGATGATTGT+AGG + chr6_1:27179909-27179928 Msa0880500:CDS 25.0%
! ACATTATATATACTCCTTCT+GGG - chr6_1:27180349-27180368 None:intergenic 25.0%
! TACATTATATATACTCCTTC+TGG - chr6_1:27180350-27180369 None:intergenic 25.0%
! TAAGTCTTTATGAAACATTG+AGG + chr6_1:27180508-27180527 Msa0880500:CDS 25.0%
! AAGTCTTTATGAAACATTGA+GGG + chr6_1:27180509-27180528 Msa0880500:CDS 25.0%
! ATAGAATCTGAATTAACCAA+AGG + chr6_1:27180579-27180598 Msa0880500:CDS 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - chr6_1:27181349-27181368 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + chr6_1:27181348-27181367 Msa0880500:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + chr6_1:27181361-27181380 Msa0880500:intron 25.0%
!!! CTTCGTTTCTTTTTGAAAAA+TGG - chr6_1:27181489-27181508 None:intergenic 25.0%
!! ACACCAACTAAATTTTATGA+AGG + chr6_1:27181948-27181967 Msa0880500:intron 25.0%
! ACACCTTCATAAAATTTAGT+TGG - chr6_1:27181954-27181973 None:intergenic 25.0%
! GCAAAGTTATAACTAAAAAG+TGG + chr6_1:27181980-27181999 Msa0880500:intron 25.0%
!! ATTCATAAGATCACCTTTTT+GGG - chr6_1:27182144-27182163 None:intergenic 25.0%
!! TATTCATAAGATCACCTTTT+TGG - chr6_1:27182145-27182164 None:intergenic 25.0%
! TGAATAAACTCTCAATATTC+AGG + chr6_1:27182159-27182178 Msa0880500:intron 25.0%
!! CTCAATATTCAGGTTTATAA+CGG + chr6_1:27182169-27182188 Msa0880500:intron 25.0%
! AGTAGTTGAAAAAAAACTTG+AGG + chr6_1:27182382-27182401 Msa0880500:intron 25.0%
! GTAGTTGAAAAAAAACTTGA+GGG + chr6_1:27182383-27182402 Msa0880500:intron 25.0%
! TAGTTGAAAAAAAACTTGAG+GGG + chr6_1:27182384-27182403 Msa0880500:intron 25.0%
!!! AAACATGCATAAGTATTGAT+TGG + chr6_1:27182486-27182505 Msa0880500:intron 25.0%
! GATTTGAATCACCAATATAT+TGG - chr6_1:27182836-27182855 None:intergenic 25.0%
! ATAAGTTAAAACTAACGGAA+TGG + chr6_1:27182873-27182892 Msa0880500:intron 25.0%
! AAACATTCCATTCTATTGTT+TGG + chr6_1:27182944-27182963 Msa0880500:intron 25.0%
!! AAAGTATCCAAACAATAGAA+TGG - chr6_1:27182954-27182973 None:intergenic 25.0%
! ATTGTTTGGATACTTTATGA+TGG + chr6_1:27182958-27182977 Msa0880500:intron 25.0%
!!! AGTACTTTTTTTTAGTAGCA+TGG - chr6_1:27183190-27183209 None:intergenic 25.0%
! TGCTACAAGCAAAAATTTAT+TGG + chr6_1:27183275-27183294 Msa0880500:intron 25.0%
! TCAAACATAAATACAGATGA+AGG + chr6_1:27183339-27183358 Msa0880500:intron 25.0%
! AGAAGTGAAGAAAAAAGAAA+TGG + chr6_1:27183409-27183428 Msa0880500:intron 25.0%
! GAAGTGAAGAAAAAAGAAAT+GGG + chr6_1:27183410-27183429 Msa0880500:intron 25.0%
! GGAATGAAAATTTGGTTAAA+TGG + chr6_1:27183529-27183548 Msa0880500:intron 25.0%
! TGAAAATTTGGTTAAATGGA+TGG + chr6_1:27183533-27183552 Msa0880500:intron 25.0%
! TTTGTAAATAAGGAATGGAA+TGG - chr6_1:27183592-27183611 None:intergenic 25.0%
!!! TTGGTTTTGTAAATAAGGAA+TGG - chr6_1:27183597-27183616 None:intergenic 25.0%
!!! AAGGAAAATTTTGGGAATTT+AGG - chr6_1:27183689-27183708 None:intergenic 25.0%
! AATTTCTCTTGACTAGATTA+TGG + chr6_1:27183788-27183807 Msa0880500:intron 25.0%
! ATTTCTCTTGACTAGATTAT+GGG + chr6_1:27183789-27183808 Msa0880500:intron 25.0%
!! ATTTCATTCCTTTTCATCTA+TGG + chr6_1:27184018-27184037 Msa0880500:intron 25.0%
!!! CTTTTGAAATTTCAGTACAT+AGG + chr6_1:27184123-27184142 Msa0880500:intron 25.0%
!! AAGAGAAACATAGAAGTTTT+AGG + chr6_1:27184229-27184248 Msa0880500:intron 25.0%
!!! TGATAACGGATTAAAAATGT+AGG + chr6_1:27184570-27184589 Msa0880500:intron 25.0%
!!! GATAACGGATTAAAAATGTA+GGG + chr6_1:27184571-27184590 Msa0880500:intron 25.0%
! TAAGGACTATTTATTAAAGG+AGG + chr6_1:27184618-27184637 Msa0880500:intron 25.0%
! AAGGACTATTTATTAAAGGA+GGG + chr6_1:27184619-27184638 Msa0880500:intron 25.0%
! ATTCAAATATAATGGCAACT+AGG + chr6_1:27184711-27184730 Msa0880500:intron 25.0%
! GATATTTGAACATCCTAAAA+AGG - chr6_1:27185230-27185249 None:intergenic 25.0%
! TAAAATAATATGGATCAGAC+CGG + chr6_1:27185308-27185327 Msa0880500:intron 25.0%
!!! TTTTGTTTTGGAGGTTTTTA+TGG - chr6_1:27185571-27185590 None:intergenic 25.0%
! TTGTAGTTATTAGTTACAAG+GGG - chr6_1:27185759-27185778 None:intergenic 25.0%
! GTTGTAGTTATTAGTTACAA+GGG - chr6_1:27185760-27185779 None:intergenic 25.0%
! TGTTGTAGTTATTAGTTACA+AGG - chr6_1:27185761-27185780 None:intergenic 25.0%
!!! CTCTCTTTTATTTAGTATTG+GGG + chr6_1:27185787-27185806 Msa0880500:intron 25.0%
! GAAAGAGTAATCAATAGTTA+AGG - chr6_1:27186216-27186235 None:intergenic 25.0%
! TTCTTATAAATAAGACCGAA+TGG - chr6_1:27186400-27186419 None:intergenic 25.0%
! TTTATTATAAATAGGACTGG+AGG + chr6_1:27186515-27186534 Msa0880500:intron 25.0%
! TTATTATAAATAGGACTGGA+GGG + chr6_1:27186516-27186535 Msa0880500:intron 25.0%
! AAAATGAAACTCCCAAAAAT+TGG + chr6_1:27186549-27186568 Msa0880500:intron 25.0%
!! CAAATAACACTCATTGTTTT+GGG - chr6_1:27186977-27186996 None:intergenic 25.0%
! AGCAATTTGAAGAAAATGTA+AGG - chr6_1:27187061-27187080 None:intergenic 25.0%
! TGATACTCATGAAAAAAATG+TGG + chr6_1:27187210-27187229 Msa0880500:intron 25.0%
!!! AGAAAGGTTTTATTAGCAAA+TGG - chr6_1:27187481-27187500 None:intergenic 25.0%
! GTAAATAATGCTGGAATTAT+TGG + chr6_1:27187810-27187829 Msa0880500:CDS 25.0%
! AAATAATGCTGGAATTATTG+GGG + chr6_1:27187812-27187831 Msa0880500:CDS 25.0%
! GTCTAAATACACACAAATTA+TGG + chr6_1:27187866-27187885 Msa0880500:CDS 25.0%
! ACCTATTCTTGCAAATATTA+TGG + chr6_1:27188216-27188235 Msa0880500:intron 25.0%
! CCTATTCTTGCAAATATTAT+GGG + chr6_1:27188217-27188236 Msa0880500:intron 25.0%
! CAAAAGTGGTTTCATATTAA+AGG + chr6_1:27188314-27188333 Msa0880500:intron 25.0%
!! TTTATGTGTGTATTTTTCTC+AGG + chr6_1:27188342-27188361 Msa0880500:intron 25.0%
!!! CCTTTACTATTTTTAAGATG+TGG - chr6_1:27188412-27188431 None:intergenic 25.0%
! CCACATCTTAAAAATAGTAA+AGG + chr6_1:27188409-27188428 Msa0880500:CDS 25.0%
! ATCTTAAAAATAGTAAAGGC+AGG + chr6_1:27188413-27188432 Msa0880500:CDS 25.0%
! AATCTATATATGTGATGTTG+TGG - chr6_1:27188547-27188566 None:intergenic 25.0%
! ACACACATATATATAGATGA+TGG + chr6_1:27188577-27188596 Msa0880500:intron 25.0%
!!! GATTTGTTGAATGATATATC+AGG + chr6_1:27188612-27188631 Msa0880500:intron 25.0%
!! GGGTCAAAGTAATATTTTAT+TGG + chr6_1:27188863-27188882 Msa0880500:CDS 25.0%
!! AAATGAAATGTGTTTTCTTG+TGG - chr6_1:27189029-27189048 None:intergenic 25.0%
! CAAGAAAACACATTTCATTT+AGG + chr6_1:27189029-27189048 Msa0880500:three_prime_UTR 25.0%
!! AAAGGTACATGCTAATTAAA+CGG - chr6_1:27189099-27189118 None:intergenic 25.0%
!!! AAAATCAGTAGTTTTTTTGG+GGG - chr6_1:27189226-27189245 None:intergenic 25.0%
! AAAAAAATGTAGTTTCACGT+CGG - chr6_1:27189273-27189292 None:intergenic 25.0%
AAGAATTTGAAGGTCCAATA+TGG - chr6_1:27179588-27179607 None:intergenic 30.0%
AATGGAAAGGAAGAATTTGA+AGG - chr6_1:27179598-27179617 None:intergenic 30.0%
AGGGAAGAATGTAAAGATAA+TGG - chr6_1:27179616-27179635 None:intergenic 30.0%
AGTTACATCTTCAAACATCA+TGG - chr6_1:27180102-27180121 None:intergenic 30.0%
ATGTAACTGATATCACCAAT+TGG + chr6_1:27180114-27180133 Msa0880500:CDS 30.0%
!! TAGCTTTAAATTACCATGAG+AGG - chr6_1:27180143-27180162 None:intergenic 30.0%
ATTCCCAATTCAACTCAATA+AGG - chr6_1:27180185-27180204 None:intergenic 30.0%
!! TATTGAGTTGAATTGGGAAT+TGG + chr6_1:27180185-27180204 Msa0880500:intron 30.0%
!!! TATTTGCTGTGTATTTTGGT+AGG + chr6_1:27180213-27180232 Msa0880500:intron 30.0%
! TCCTTTCATCAATTGATTCT+TGG + chr6_1:27180314-27180333 Msa0880500:CDS 30.0%
TCCAAGAATCAATTGATGAA+AGG - chr6_1:27180318-27180337 None:intergenic 30.0%
AATTCAGATTCTATGTAACC+TGG - chr6_1:27180573-27180592 None:intergenic 30.0%
TTGTTACATCTCTCATATCT+TGG - chr6_1:27180644-27180663 None:intergenic 30.0%
TAGTTATAGCCTGTATTACT+AGG - chr6_1:27180693-27180712 None:intergenic 30.0%
TGTGCAAAATCAATAGTGAA+TGG + chr6_1:27180796-27180815 Msa0880500:CDS 30.0%
AATAGTGAATGGTACATTGA+GGG + chr6_1:27180807-27180826 Msa0880500:CDS 30.0%
! AAAAAGATTTTGGATGCTAC+TGG + chr6_1:27180970-27180989 Msa0880500:CDS 30.0%
TGAATGAGTGATTGTCAAAT+GGG + chr6_1:27181044-27181063 Msa0880500:intron 30.0%
! AGATAGTTTTCTTGTATGTC+AGG + chr6_1:27181097-27181116 Msa0880500:intron 30.0%
TCAACAAAGTTGTCATCAAA+TGG - chr6_1:27181323-27181342 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG + chr6_1:27181374-27181393 Msa0880500:intron 30.0%
! TTTGAAGTAGGTCTGTAAAT+AGG + chr6_1:27181692-27181711 Msa0880500:intron 30.0%
!!! CTTGAAGTTTTTTCATAGGT+AGG + chr6_1:27181770-27181789 Msa0880500:intron 30.0%
ACACTTCATAGCAAATAGAT+AGG - chr6_1:27181827-27181846 None:intergenic 30.0%
CTAAAAGACACCTTCATATA+AGG - chr6_1:27181899-27181918 None:intergenic 30.0%
AGTTGAAAAAAAACTTGAGG+GGG + chr6_1:27182385-27182404 Msa0880500:intron 30.0%
AAGGACTATTTGTCAAAAGA+GGG - chr6_1:27182598-27182617 None:intergenic 30.0%
TAAGGACTATTTGTCAAAAG+AGG - chr6_1:27182599-27182618 None:intergenic 30.0%
AATAATCTCCAATCACCAAA+CGG + chr6_1:27182686-27182705 Msa0880500:intron 30.0%
!! TTGTTGATACCGGTTTATAA+TGG + chr6_1:27182732-27182751 Msa0880500:intron 30.0%
!! ATACCGGTTTATAATGGATT+GGG + chr6_1:27182738-27182757 Msa0880500:intron 30.0%
! TTGGATACTTTATGATGGAA+CGG + chr6_1:27182963-27182982 Msa0880500:intron 30.0%
TTCCATTGTTTGGAAATTGA+CGG + chr6_1:27182999-27183018 Msa0880500:intron 30.0%
TTTAGTAGCATGGTATACAA+GGG - chr6_1:27183180-27183199 None:intergenic 30.0%
! TTTTAGTAGCATGGTATACA+AGG - chr6_1:27183181-27183200 None:intergenic 30.0%
GCTAGCATTCATAAATTAGA+AGG + chr6_1:27183310-27183329 Msa0880500:intron 30.0%
GAAGAAAAAAGAAATGGGAA+TGG + chr6_1:27183415-27183434 Msa0880500:intron 30.0%
! ATTTTCATTCCACCCAATTT+GGG - chr6_1:27183520-27183539 None:intergenic 30.0%
! AATTTTCATTCCACCCAATT+TGG - chr6_1:27183521-27183540 None:intergenic 30.0%
AATTGGGTGGAATGAAAATT+TGG + chr6_1:27183521-27183540 Msa0880500:intron 30.0%
TTTGGTTAAATGGATGGTAT+TGG + chr6_1:27183539-27183558 Msa0880500:intron 30.0%
AAATAAGGAATGGAATGGAA+TGG - chr6_1:27183587-27183606 None:intergenic 30.0%
AAGAAGAAGAAATTTGGGAA+AGG - chr6_1:27183735-27183754 None:intergenic 30.0%
! TCAAGAGAAATTCCTTTTTG+GGG - chr6_1:27183780-27183799 None:intergenic 30.0%
! GTCAAGAGAAATTCCTTTTT+GGG - chr6_1:27183781-27183800 None:intergenic 30.0%
! AGTCAAGAGAAATTCCTTTT+TGG - chr6_1:27183782-27183801 None:intergenic 30.0%
CTTATCATATAACGTTATGG+TGG - chr6_1:27183852-27183871 None:intergenic 30.0%
! TCTTTGGACTAGATTATGAA+AGG - chr6_1:27183975-27183994 None:intergenic 30.0%
AAAAAAAAGGAAAAGTGGCT+CGG - chr6_1:27184047-27184066 None:intergenic 30.0%
CACAAAATCATGAGATTTGA+GGG - chr6_1:27184087-27184106 None:intergenic 30.0%
ACACAAAATCATGAGATTTG+AGG - chr6_1:27184088-27184107 None:intergenic 30.0%
GATGAGAAATTTGATCCTTA+GGG + chr6_1:27184145-27184164 Msa0880500:intron 30.0%
ATGAGAAATTTGATCCTTAG+GGG + chr6_1:27184146-27184165 Msa0880500:intron 30.0%
GCATATAACAAGAAGATTGA+AGG + chr6_1:27184186-27184205 Msa0880500:intron 30.0%
AACAAGAAGATTGAAGGTTA+AGG + chr6_1:27184192-27184211 Msa0880500:intron 30.0%
TGATTTGACATCTACTGAAA+TGG + chr6_1:27184255-27184274 Msa0880500:intron 30.0%
AAGGACTTTGTGAAAAGTTT+AGG + chr6_1:27184325-27184344 Msa0880500:intron 30.0%
AGGACTTTGTGAAAAGTTTA+GGG + chr6_1:27184326-27184345 Msa0880500:intron 30.0%
ATGGCCACGTTAAAAAAAAT+TGG + chr6_1:27184490-27184509 Msa0880500:intron 30.0%
TGGCCACGTTAAAAAAAATT+GGG + chr6_1:27184491-27184510 Msa0880500:intron 30.0%
ATTAAAGGAGGGCAAAATAT+AGG + chr6_1:27184630-27184649 Msa0880500:intron 30.0%
TTAAAGGAGGGCAAAATATA+GGG + chr6_1:27184631-27184650 Msa0880500:intron 30.0%
GACGATATCAATATGTTGAA+TGG + chr6_1:27184771-27184790 Msa0880500:intron 30.0%
AAAATAATATGGATCAGACC+GGG + chr6_1:27185309-27185328 Msa0880500:intron 30.0%
TATGGAATGTTTACGTTGTT+TGG - chr6_1:27185553-27185572 None:intergenic 30.0%
TTGCAATTTATCTGCATTCA+GGG - chr6_1:27185860-27185879 None:intergenic 30.0%
TTTGCAATTTATCTGCATTC+AGG - chr6_1:27185861-27185880 None:intergenic 30.0%
TTTGCAATTTCTCTTCATTC+AGG + chr6_1:27186008-27186027 Msa0880500:intron 30.0%
TTGCAATTTCTCTTCATTCA+GGG + chr6_1:27186009-27186028 Msa0880500:intron 30.0%
TACTGGAGTAATACTAAATG+GGG - chr6_1:27186082-27186101 None:intergenic 30.0%
CTACTGGAGTAATACTAAAT+GGG - chr6_1:27186083-27186102 None:intergenic 30.0%
TCTACTGGAGTAATACTAAA+TGG - chr6_1:27186084-27186103 None:intergenic 30.0%
! TCTAAAGCGACATACAATTT+AGG - chr6_1:27186120-27186139 None:intergenic 30.0%
! TACGAGACATACCAATTTTT+GGG - chr6_1:27186563-27186582 None:intergenic 30.0%
! ATACGAGACATACCAATTTT+TGG - chr6_1:27186564-27186583 None:intergenic 30.0%
AGTTAGATGGTAGATAGATA+TGG - chr6_1:27186587-27186606 None:intergenic 30.0%
TAACTAGTGGTCGATAAAAT+TGG + chr6_1:27186602-27186621 Msa0880500:intron 30.0%
CTTGTATCACCATAAATTCA+AGG + chr6_1:27186632-27186651 Msa0880500:intron 30.0%
! ATCAATGCATATGCTATTTG+TGG + chr6_1:27186669-27186688 Msa0880500:intron 30.0%
! TGCTATTTGTGGAAATTTCA+AGG + chr6_1:27186680-27186699 Msa0880500:intron 30.0%
TTGCTTATATTAGTGACTGA+AGG + chr6_1:27186859-27186878 Msa0880500:intron 30.0%
TGCTTATATTAGTGACTGAA+GGG + chr6_1:27186860-27186879 Msa0880500:intron 30.0%
! GCAAATAACACTCATTGTTT+TGG - chr6_1:27186978-27186997 None:intergenic 30.0%
AGAAAAGTTGTACTAATCAC+TGG + chr6_1:27187121-27187140 Msa0880500:CDS 30.0%
! GTCACTTGTTGACATTAAAA+TGG + chr6_1:27187564-27187583 Msa0880500:CDS 30.0%
ACCAATAATGATAACATCAG+GGG - chr6_1:27187632-27187651 None:intergenic 30.0%
CACCAATAATGATAACATCA+GGG - chr6_1:27187633-27187652 None:intergenic 30.0%
!! TTACCTCTGAAATTGTAAGA+TGG + chr6_1:27188123-27188142 Msa0880500:intron 30.0%
CCCATAATATTTGCAAGAAT+AGG - chr6_1:27188220-27188239 None:intergenic 30.0%
AATGATATATCAGGCTAGTA+AGG + chr6_1:27188621-27188640 Msa0880500:intron 30.0%
! GAGACTTTAAGAATTGAACT+TGG + chr6_1:27188664-27188683 Msa0880500:CDS 30.0%
! CTTTAAGAATTGAACTTGGT+TGG + chr6_1:27188668-27188687 Msa0880500:CDS 30.0%
ATATTACTTTGACCCATGAA+GGG - chr6_1:27188858-27188877 None:intergenic 30.0%
AATATTACTTTGACCCATGA+AGG - chr6_1:27188859-27188878 None:intergenic 30.0%
TAAGCAGATTATCATTCTTC+CGG - chr6_1:27188957-27188976 None:intergenic 30.0%
TTTATTCTACCTTAAGCTCT+TGG - chr6_1:27188993-27189012 None:intergenic 30.0%
CAATAAGACAGTGTGATAAA+AGG - chr6_1:27189117-27189136 None:intergenic 30.0%
!!! AAAAGAATGGAGGTATTTTG+TGG - chr6_1:27189347-27189366 None:intergenic 30.0%
AGTGTGAGATTGAAAAAGAA+TGG - chr6_1:27189360-27189379 None:intergenic 30.0%
GGTTCAGGAACTTATGAATA+AGG - chr6_1:27179518-27179537 None:intergenic 35.0%
AGTAAGGAAAAGAAGGTGAA+TGG - chr6_1:27179552-27179571 None:intergenic 35.0%
GAAAAGGAGTAAGGAAAAGA+AGG - chr6_1:27179559-27179578 None:intergenic 35.0%
! TCCTTTTCTTACCACCATAT+TGG + chr6_1:27179571-27179590 Msa0880500:CDS 35.0%
TCCAATATGGTGGTAAGAAA+AGG - chr6_1:27179575-27179594 None:intergenic 35.0%
AATTTGAAGGTCCAATATGG+TGG - chr6_1:27179585-27179604 None:intergenic 35.0%
! CTTTACCAGCAACATTTTCA+GGG - chr6_1:27179635-27179654 None:intergenic 35.0%
! ACTTTACCAGCAACATTTTC+AGG - chr6_1:27179636-27179655 None:intergenic 35.0%
GCACGCATTATAATAACATC+AGG - chr6_1:27179884-27179903 None:intergenic 35.0%
! GATGAAACCGTTAACCATTT+TGG + chr6_1:27179941-27179960 Msa0880500:CDS 35.0%
ACGTCTACCAAAATGGTTAA+CGG - chr6_1:27179951-27179970 None:intergenic 35.0%
CATACATACGTCTACCAAAA+TGG - chr6_1:27179958-27179977 None:intergenic 35.0%
TTCTCTGTAATGCATTACAG+TGG + chr6_1:27180043-27180062 Msa0880500:intron 35.0%
ATGCATTACAGTGGATCATT+TGG + chr6_1:27180052-27180071 Msa0880500:intron 35.0%
GCTAACTACATGACTTTATC+TGG + chr6_1:27180159-27180178 Msa0880500:intron 35.0%
!! TGGCCTTATTGAGTTGAATT+GGG + chr6_1:27180179-27180198 Msa0880500:intron 35.0%
! TTTGGTAGGACACAAACTTT+TGG + chr6_1:27180227-27180246 Msa0880500:intron 35.0%
! TTGGTAGGACACAAACTTTT+GGG + chr6_1:27180228-27180247 Msa0880500:intron 35.0%
CAATAGTGAATGGTACATTG+AGG + chr6_1:27180806-27180825 Msa0880500:CDS 35.0%
ATAGTGAATGGTACATTGAG+GGG + chr6_1:27180808-27180827 Msa0880500:CDS 35.0%
TATGTCATTCTAAACCATGC+TGG - chr6_1:27180853-27180872 None:intergenic 35.0%
! AGCACCTAGCAAAAAGATTT+TGG + chr6_1:27180960-27180979 Msa0880500:CDS 35.0%
! GCATCCAAAATCTTTTTGCT+AGG - chr6_1:27180967-27180986 None:intergenic 35.0%
CTGAATGAGTGATTGTCAAA+TGG + chr6_1:27181043-27181062 Msa0880500:intron 35.0%
! TTTAAGACAGCAATGTTGTC+AGG + chr6_1:27181213-27181232 Msa0880500:intron 35.0%
TGAGTATGAGAGAAAGTTGT+CGG + chr6_1:27181421-27181440 Msa0880500:intron 35.0%
TTAAAGCCTATTTCACCGTA+AGG - chr6_1:27181557-27181576 None:intergenic 35.0%
TCAGGTCAGGCTAAAAAAAT+AGG + chr6_1:27181718-27181737 Msa0880500:intron 35.0%
AAAAACTTCAAGCTCGAATC+TGG - chr6_1:27181762-27181781 None:intergenic 35.0%
!!! CGAGCTTGAAGTTTTTTCAT+AGG + chr6_1:27181766-27181785 Msa0880500:intron 35.0%
TCATAGCAAATAGATAGGCT+AGG - chr6_1:27181822-27181841 None:intergenic 35.0%
CTAGAAGACACCTTATATGA+AGG + chr6_1:27181886-27181905 Msa0880500:intron 35.0%
AAAGTGGAAATCACACCTTA+AGG + chr6_1:27181996-27182015 Msa0880500:intron 35.0%
! TTTTAGCAAGTCACACCTTA+AGG - chr6_1:27182014-27182033 None:intergenic 35.0%
TTGCTAAAAGACACCTTCAT+GGG + chr6_1:27182025-27182044 Msa0880500:intron 35.0%
TATAACGGCAAAAGTAAAGC+CGG + chr6_1:27182184-27182203 Msa0880500:intron 35.0%
TATTTGTCAAAAGAGGGCTA+GGG - chr6_1:27182592-27182611 None:intergenic 35.0%
TTGGAGATTATTTGACAGCA+GGG - chr6_1:27182678-27182697 None:intergenic 35.0%
ATTGGAGATTATTTGACAGC+AGG - chr6_1:27182679-27182698 None:intergenic 35.0%
!! GATACCGGTTTATAATGGAT+TGG + chr6_1:27182737-27182756 Msa0880500:intron 35.0%
!! GTCATTTTACCCATTTCGTT+TGG - chr6_1:27182764-27182783 None:intergenic 35.0%
!! ACAAAATGGGTTAGATCCAT+GGG - chr6_1:27182791-27182810 None:intergenic 35.0%
!! AACAAAATGGGTTAGATCCA+TGG - chr6_1:27182792-27182811 None:intergenic 35.0%
! ATGGATCTAACCCATTTTGT+TGG + chr6_1:27182791-27182810 Msa0880500:intron 35.0%
! ATTGGTGATTCAAATCCCTA+AGG + chr6_1:27182840-27182859 Msa0880500:intron 35.0%
TTAAAACTAACGGAATGGAG+CGG + chr6_1:27182878-27182897 Msa0880500:intron 35.0%
TTCCGTCAATTTCCAAACAA+TGG - chr6_1:27183004-27183023 None:intergenic 35.0%
TTGTTTGGAAATTGACGGAA+CGG + chr6_1:27183004-27183023 Msa0880500:intron 35.0%
TCTAATGAAACTGCATGTGT+TGG - chr6_1:27183126-27183145 None:intergenic 35.0%
TTAGTAGCATGGTATACAAG+GGG - chr6_1:27183179-27183198 None:intergenic 35.0%
! ATTATAGCTTGTAGCAGACA+TGG - chr6_1:27183248-27183267 None:intergenic 35.0%
ACATAAATACAGATGAAGGC+AGG + chr6_1:27183343-27183362 Msa0880500:intron 35.0%
! GTTAAATGGATGGTATTGGA+TGG + chr6_1:27183543-27183562 Msa0880500:intron 35.0%
CAAAACCAAACAATGGAACA+TGG + chr6_1:27183608-27183627 Msa0880500:intron 35.0%
TTAGGCTATGTTTGGATTGA+TGG - chr6_1:27183671-27183690 None:intergenic 35.0%
TTGGGAATTTAGGCTATGTT+TGG - chr6_1:27183679-27183698 None:intergenic 35.0%
! GGAGGAAGAAGGAAAATTTT+GGG - chr6_1:27183697-27183716 None:intergenic 35.0%
! AGGAGGAAGAAGGAAAATTT+TGG - chr6_1:27183698-27183717 None:intergenic 35.0%
GGAGGAAGAAGAAGAAATTT+GGG - chr6_1:27183740-27183759 None:intergenic 35.0%
AGGAGGAAGAAGAAGAAATT+TGG - chr6_1:27183741-27183760 None:intergenic 35.0%
GATTATGAAAGGTTGTGACT+AGG - chr6_1:27183964-27183983 None:intergenic 35.0%
ATCTAGTCCAAAGAACACAA+AGG + chr6_1:27183981-27184000 Msa0880500:intron 35.0%
TCTAGTCCAAAGAACACAAA+GGG + chr6_1:27183982-27184001 Msa0880500:intron 35.0%
AACTTACCCTTTGTGTTCTT+TGG - chr6_1:27183991-27184010 None:intergenic 35.0%
! TCATTCCTTTTCATCTATGG+TGG + chr6_1:27184021-27184040 Msa0880500:intron 35.0%
GATTTGAGGGAAGAATTCAA+AGG - chr6_1:27184074-27184093 None:intergenic 35.0%
GGATGAGAAATTTGATCCTT+AGG + chr6_1:27184144-27184163 Msa0880500:intron 35.0%
! ATATGCCTCTAAAGATGTGT+TGG - chr6_1:27184172-27184191 None:intergenic 35.0%
AAGAAGATTGAAGGTTAAGG+AGG + chr6_1:27184195-27184214 Msa0880500:intron 35.0%
ATCTACTGAAATGGCTCTTA+AGG + chr6_1:27184264-27184283 Msa0880500:intron 35.0%
ATGGATGTATATGTGGCAAT+GGG - chr6_1:27184466-27184485 None:intergenic 35.0%
CATACACATGGATGTATATG+TGG - chr6_1:27184473-27184492 None:intergenic 35.0%
CACATATACATCCATGTGTA+TGG + chr6_1:27184471-27184490 Msa0880500:intron 35.0%
GGCCACGTTAAAAAAAATTG+GGG + chr6_1:27184492-27184511 Msa0880500:intron 35.0%
GCATCTCGTTAAGAAATTGA+CGG + chr6_1:27184534-27184553 Msa0880500:intron 35.0%
GCAGGGACTATTAATGATAA+CGG + chr6_1:27184556-27184575 Msa0880500:intron 35.0%
!!! TTGATTGGTTTTGTTTGGCA+TGG - chr6_1:27184747-27184766 None:intergenic 35.0%
TGCCAAACAAAACCAATCAA+AGG + chr6_1:27184747-27184766 Msa0880500:intron 35.0%
!!! CTCCTTTGATTGGTTTTGTT+TGG - chr6_1:27184752-27184771 None:intergenic 35.0%
TTGATATCGTCTCCTTTGAT+TGG - chr6_1:27184762-27184781 None:intergenic 35.0%
! GCATACTTGACAACCTTTTT+AGG + chr6_1:27185214-27185233 Msa0880500:intron 35.0%
TCTGGTATGGCTACATAAAT+GGG - chr6_1:27185411-27185430 None:intergenic 35.0%
ATCTGGTATGGCTACATAAA+TGG - chr6_1:27185412-27185431 None:intergenic 35.0%
TTTATGTAGCCATACCAGAT+CGG + chr6_1:27185412-27185431 Msa0880500:intron 35.0%
AAAGCGCGTGAGAAATTAAT+AGG - chr6_1:27185509-27185528 None:intergenic 35.0%
TCAATTCAATGCAAGTAGAG+AGG - chr6_1:27185662-27185681 None:intergenic 35.0%
TCTCTACTTGCATTGAATTG+AGG + chr6_1:27185661-27185680 Msa0880500:intron 35.0%
ACTAACAAGGTCTACATTCA+GGG - chr6_1:27185889-27185908 None:intergenic 35.0%
AGGGACTAAATTGACTAACA+AGG - chr6_1:27185902-27185921 None:intergenic 35.0%
ACTAACGAAGTTTGCATTCA+GGG - chr6_1:27185921-27185940 None:intergenic 35.0%
! AGTCACTTTAGTCCATGAAT+GGG - chr6_1:27186055-27186074 None:intergenic 35.0%
! TAGTCACTTTAGTCCATGAA+TGG - chr6_1:27186056-27186075 None:intergenic 35.0%
AAGCGACATACAATTTAGGA+CGG - chr6_1:27186116-27186135 None:intergenic 35.0%
AGAGAGTAGTTTACTCCATT+CGG + chr6_1:27186382-27186401 Msa0880500:intron 35.0%
TCTATCTACCATCTAACTAG+TGG + chr6_1:27186589-27186608 Msa0880500:intron 35.0%
TTTATCGACCACTAGTTAGA+TGG - chr6_1:27186600-27186619 None:intergenic 35.0%
TGGTATAGGCCTTGAATTTA+TGG - chr6_1:27186644-27186663 None:intergenic 35.0%
!! TGCATTGATGATGATGGTAT+AGG - chr6_1:27186658-27186677 None:intergenic 35.0%
!! AGCATATGCATTGATGATGA+TGG - chr6_1:27186664-27186683 None:intergenic 35.0%
TATATACTGTATACACCCTC+CGG + chr6_1:27186725-27186744 Msa0880500:intron 35.0%
TGCTTATATTAGTAACCGGA+GGG - chr6_1:27186743-27186762 None:intergenic 35.0%
TTGCTTATATTAGTAACCGG+AGG - chr6_1:27186744-27186763 None:intergenic 35.0%
TGTAAGGTAGCATGATGATA+GGG - chr6_1:27187045-27187064 None:intergenic 35.0%
ATGTAAGGTAGCATGATGAT+AGG - chr6_1:27187046-27187065 None:intergenic 35.0%
!! GTTTTATTAGCAAATGGCAG+TGG - chr6_1:27187475-27187494 None:intergenic 35.0%
TCCCCTGATGTTATCATTAT+TGG + chr6_1:27187628-27187647 Msa0880500:CDS 35.0%
GCACCAATAATGATAACATC+AGG - chr6_1:27187634-27187653 None:intergenic 35.0%
!! GTACTTTTTGTTTCATGCAG+TGG + chr6_1:27187779-27187798 Msa0880500:intron 35.0%
GATCATCTGGTAAATAATGC+TGG + chr6_1:27187801-27187820 Msa0880500:CDS 35.0%
!!! AAGGTTGGTAGAGGATTTTT+CGG + chr6_1:27187839-27187858 Msa0880500:CDS 35.0%
GTTCCATCTTACAATTTCAG+AGG - chr6_1:27188129-27188148 None:intergenic 35.0%
TTTCTCAGGAAACAAACTTC+TGG + chr6_1:27188356-27188375 Msa0880500:intron 35.0%
TTCTCAGGAAACAAACTTCT+GGG + chr6_1:27188357-27188376 Msa0880500:intron 35.0%
ACGTTATAGATACTGAGTCT+CGG - chr6_1:27188478-27188497 None:intergenic 35.0%
!! ATTGAACTTGGTTGGTCTAT+TGG + chr6_1:27188676-27188695 Msa0880500:CDS 35.0%
!!! TGTTTTGATAAAACCAGGTG+TGG - chr6_1:27188713-27188732 None:intergenic 35.0%
!!! AGGTCTGTTTTGATAAAACC+AGG - chr6_1:27188718-27188737 None:intergenic 35.0%
!!! TGGTTTTATCAAAACAGACC+TGG + chr6_1:27188717-27188736 Msa0880500:CDS 35.0%
GATTATCATTCTTCCGGTAA+GGG - chr6_1:27188951-27188970 None:intergenic 35.0%
AGATTATCATTCTTCCGGTA+AGG - chr6_1:27188952-27188971 None:intergenic 35.0%
TCCAAATTAGAACCGTTTGT+TGG - chr6_1:27189062-27189081 None:intergenic 35.0%
! TATTTTGTGGTGAAAAGAGG+AGG - chr6_1:27189334-27189353 None:intergenic 35.0%
! AGGTATTTTGTGGTGAAAAG+AGG - chr6_1:27189337-27189356 None:intergenic 35.0%
GTGAGATTGAAAAAGAATGG+AGG - chr6_1:27189357-27189376 None:intergenic 35.0%
ATAGTAGTACCTCATTTGCA+AGG + chr6_1:27189472-27189491 Msa0880500:three_prime_UTR 35.0%
AAGGAAAAGAAGGTGAATGG+AGG - chr6_1:27179549-27179568 None:intergenic 40.0%
TGGTGGTAAGAAAAGGAGTA+AGG - chr6_1:27179568-27179587 None:intergenic 40.0%
TTCTTCCCTGAAAATGTTGC+TGG + chr6_1:27179627-27179646 Msa0880500:CDS 40.0%
GGTAAAGTTGTTCACATCAC+TGG + chr6_1:27179648-27179667 Msa0880500:CDS 40.0%
! TTTTACCTCTCCAATACCAG+AGG - chr6_1:27179679-27179698 None:intergenic 40.0%
!! AGTTGATGATTGTAGGCGTT+TGG + chr6_1:27179916-27179935 Msa0880500:CDS 40.0%
!! CTGGCCTTATTGAGTTGAAT+TGG + chr6_1:27180178-27180197 Msa0880500:intron 40.0%
! TGGTAGGACACAAACTTTTG+GGG + chr6_1:27180229-27180248 Msa0880500:intron 40.0%
TGAGGTGTGGTAAAGCAAAA+CGG - chr6_1:27180270-27180289 None:intergenic 40.0%
AAACAGCAGAGGCAAAATTG+TGG + chr6_1:27180291-27180310 Msa0880500:CDS 40.0%
GAAACATTGAGGGTTGAAGT+TGG + chr6_1:27180519-27180538 Msa0880500:CDS 40.0%
GGTGTAACAATTGTTACACC+AGG + chr6_1:27180552-27180571 Msa0880500:CDS 40.0%
TGGCAATAAGACTTTGCCTT+TGG - chr6_1:27180598-27180617 None:intergenic 40.0%
!! AAAGTCTTATTGCCACCAGA+AGG + chr6_1:27180603-27180622 Msa0880500:CDS 40.0%
AGTGTTGTGTCCAGAATTGT+TGG + chr6_1:27180882-27180901 Msa0880500:CDS 40.0%
TCAGGAGATCGAATTGAAGA+TGG - chr6_1:27181015-27181034 None:intergenic 40.0%
ATCTTCAATTCGATCTCCTG+AGG + chr6_1:27181014-27181033 Msa0880500:intron 40.0%
!!! TGTCAAATGGGAGTGTCTTT+TGG + chr6_1:27181056-27181075 Msa0880500:intron 40.0%
!!! GTCAAATGGGAGTGTCTTTT+GGG + chr6_1:27181057-27181076 Msa0880500:intron 40.0%
!!! TCAAATGGGAGTGTCTTTTG+GGG + chr6_1:27181058-27181077 Msa0880500:intron 40.0%
AGGTCTGTAAATAGGCTTTC+AGG + chr6_1:27181700-27181719 Msa0880500:intron 40.0%
! TGTAAATAGGCTTTCAGGTC+AGG + chr6_1:27181705-27181724 Msa0880500:intron 40.0%
CTTGCTAAAAGACACCTTCA+TGG + chr6_1:27182024-27182043 Msa0880500:intron 40.0%
CTATTTGTCAAAAGAGGGCT+AGG - chr6_1:27182593-27182612 None:intergenic 40.0%
TGGCCCAATCCATTATAAAC+CGG - chr6_1:27182744-27182763 None:intergenic 40.0%
CTTATCCAAACAGAGCCTTA+GGG - chr6_1:27182858-27182877 None:intergenic 40.0%
ACTTATCCAAACAGAGCCTT+AGG - chr6_1:27182859-27182878 None:intergenic 40.0%
AATTGAATTCTCTACTCCCC+AGG + chr6_1:27183080-27183099 Msa0880500:intron 40.0%
TACTCACAGATGATTGACCT+GGG - chr6_1:27183100-27183119 None:intergenic 40.0%
TGAAGAGACAGAGAAGATGA+AGG + chr6_1:27183374-27183393 Msa0880500:intron 40.0%
GAATGGTGCGTGCTAAAATT+GGG + chr6_1:27183432-27183451 Msa0880500:intron 40.0%
CATCAGATACCTCCCAAATT+GGG + chr6_1:27183505-27183524 Msa0880500:intron 40.0%
! ATGGATGGTATTGGATGGAA+TGG + chr6_1:27183548-27183567 Msa0880500:intron 40.0%
! TGGATGGTATTGGATGGAAT+GGG + chr6_1:27183549-27183568 Msa0880500:intron 40.0%
TGGAACCATGTTCCATTGTT+TGG - chr6_1:27183616-27183635 None:intergenic 40.0%
! AGTGATGGAATGGAATGGAA+TGG - chr6_1:27183646-27183665 None:intergenic 40.0%
! ATTGATGGAGAGTGATGGAA+TGG - chr6_1:27183656-27183675 None:intergenic 40.0%
TTTGGATTGATGGAGAGTGA+TGG - chr6_1:27183661-27183680 None:intergenic 40.0%
!! TTTTTGGGGAAGAAGAGAGA+TGG - chr6_1:27183766-27183785 None:intergenic 40.0%
ATCTCTCTTCTTCCCCAAAA+AGG + chr6_1:27183765-27183784 Msa0880500:intron 40.0%
TGACTAGGAAACATGCAAGA+GGG - chr6_1:27183949-27183968 None:intergenic 40.0%
! TTTTGGTACTTGGATGGAGA+AGG + chr6_1:27184306-27184325 Msa0880500:intron 40.0%
CATGGATGTATATGTGGCAA+TGG - chr6_1:27184467-27184486 None:intergenic 40.0%
! TTTTAACGTGGCCATACACA+TGG - chr6_1:27184485-27184504 None:intergenic 40.0%
!!! GGCCCCAATTTTTTTTAACG+TGG - chr6_1:27184497-27184516 None:intergenic 40.0%
AAAAAAAATTGGGGCCCACT+TGG + chr6_1:27184501-27184520 Msa0880500:intron 40.0%
TCGTTAAGAAATTGACGGCA+GGG + chr6_1:27184539-27184558 Msa0880500:intron 40.0%
! ACATCGATGTCTAGCGTTTT+AGG + chr6_1:27184818-27184837 Msa0880500:intron 40.0%
GCAAGTTTCTTTCTTTGCCT+TGG + chr6_1:27185150-27185169 Msa0880500:intron 40.0%
TTATGTAGCCATACCAGATC+GGG + chr6_1:27185413-27185432 Msa0880500:intron 40.0%
!!! CTCACGCGCTTTATTTTGTT+TGG + chr6_1:27185517-27185536 Msa0880500:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+CGG + chr6_1:27185814-27185833 Msa0880500:intron 40.0%
GACTAACAAGGTCTACATTC+AGG - chr6_1:27185890-27185909 None:intergenic 40.0%
GACTAACGAAGTTTGCATTC+AGG - chr6_1:27185922-27185941 None:intergenic 40.0%
GACTAATGGAGTCACATTCA+GGG - chr6_1:27185953-27185972 None:intergenic 40.0%
TGACTAATGGAGTCACATTC+AGG - chr6_1:27185954-27185973 None:intergenic 40.0%
TCAGGGACTAAAGTGACTAA+TGG - chr6_1:27185812-27185831 None:intergenic 40.0%
! GACATACAATTTAGGACGGA+GGG - chr6_1:27186112-27186131 None:intergenic 40.0%
GTTGGTGCGAACAGAAAATA+TGG + chr6_1:27187096-27187115 Msa0880500:CDS 40.0%
AATGGAGAATCTAGTAGCAG+TGG + chr6_1:27187582-27187601 Msa0880500:CDS 40.0%
AATTATTGGGGTTCCAAGGT+TGG + chr6_1:27187824-27187843 Msa0880500:CDS 40.0%
GAAAAATCCTCTACCAACCT+TGG - chr6_1:27187840-27187859 None:intergenic 40.0%
ACAAAAACGGTCATGCTAAC+CGG + chr6_1:27188258-27188277 Msa0880500:intron 40.0%
TCTCAGGAAACAAACTTCTG+GGG + chr6_1:27188358-27188377 Msa0880500:intron 40.0%
TAGATACTGAGTCTCGGAAT+TGG - chr6_1:27188472-27188491 None:intergenic 40.0%
ATTCAGGGTCATTGAAGATG+AGG + chr6_1:27188741-27188760 Msa0880500:CDS 40.0%
ATTGAAGATGAGGCTACTCT+GGG + chr6_1:27188751-27188770 Msa0880500:CDS 40.0%
CATTCAACTGATGAACCCAA+TGG - chr6_1:27188784-27188803 None:intergenic 40.0%
TTCATCAGTTGAATGTGCCA+AGG + chr6_1:27188789-27188808 Msa0880500:CDS 40.0%
TGTATGTGACAAACCCTTCA+TGG + chr6_1:27188842-27188861 Msa0880500:CDS 40.0%
GTATGTGACAAACCCTTCAT+GGG + chr6_1:27188843-27188862 Msa0880500:CDS 40.0%
! AATCCCAAAGATGTGTCGTT+GGG - chr6_1:27188920-27188939 None:intergenic 40.0%
AAATCCCAAAGATGTGTCGT+TGG - chr6_1:27188921-27188940 None:intergenic 40.0%
!! GGATTTTGACAAACCCTTAC+CGG + chr6_1:27188935-27188954 Msa0880500:CDS 40.0%
! CTTAAGCTCTTGGTAACTCT+TGG - chr6_1:27188983-27189002 None:intergenic 40.0%
CAAGAGTTACCAAGAGCTTA+AGG + chr6_1:27188981-27189000 Msa0880500:CDS 40.0%
TTAGGGACTTAGCCAACAAA+CGG + chr6_1:27189047-27189066 Msa0880500:three_prime_UTR 40.0%
! GCCAACAAACGGTTCTAATT+TGG + chr6_1:27189058-27189077 Msa0880500:three_prime_UTR 40.0%
GCTTACGAGTATGCTAAGAG+AGG + chr6_1:27179782-27179801 Msa0880500:CDS 45.0%
GAGCTCTATCAGCAACTTCA+CGG - chr6_1:27179847-27179866 None:intergenic 45.0%
! GCTGATAGAGCTCGTGATTT+TGG + chr6_1:27179854-27179873 Msa0880500:CDS 45.0%
TACCATGAGAGGTCTCCAAT+TGG - chr6_1:27180132-27180151 None:intergenic 45.0%
GAGGTGTGGTAAAGCAAAAC+GGG - chr6_1:27180269-27180288 None:intergenic 45.0%
!!! TTTTGCCTCTGCTGTTTCTG+AGG - chr6_1:27180288-27180307 None:intergenic 45.0%
TATATACTCCTTCTGGGTGC+AGG - chr6_1:27180343-27180362 None:intergenic 45.0%
ATTGCCACCAGAAGGCAAAA+TGG + chr6_1:27180611-27180630 Msa0880500:CDS 45.0%
TTGCCACCAGAAGGCAAAAT+GGG + chr6_1:27180612-27180631 Msa0880500:CDS 45.0%
ATGGTACATTGAGGGGAGAT+AGG + chr6_1:27180815-27180834 Msa0880500:CDS 45.0%
TGTGTCCAGAATTGTTGGAG+TGG + chr6_1:27180887-27180906 Msa0880500:CDS 45.0%
GTGTCCAGAATTGTTGGAGT+GGG + chr6_1:27180888-27180907 Msa0880500:CDS 45.0%
TGTCCAGAATTGTTGGAGTG+GGG + chr6_1:27180889-27180908 Msa0880500:CDS 45.0%
AAACCCCACTCCAACAATTC+TGG - chr6_1:27180895-27180914 None:intergenic 45.0%
ACTCATTCAGTCTTGACCTC+AGG - chr6_1:27181033-27181052 None:intergenic 45.0%
AGCTTGACAGTCAAGCCTTA+CGG + chr6_1:27181539-27181558 Msa0880500:intron 45.0%
GTCAAGCCTTACGGTGAAAT+AGG + chr6_1:27181548-27181567 Msa0880500:intron 45.0%
TCAAGCTCGAATCTGGTCTA+TGG - chr6_1:27181755-27181774 None:intergenic 45.0%
! AGGTCAGACGAGGCTTTAAT+AGG - chr6_1:27181802-27181821 None:intergenic 45.0%
CTAAAAGACACCTTCATGGG+TGG + chr6_1:27182028-27182047 Msa0880500:intron 45.0%
GCAGGGACTATTTGTGCTAA+CGG - chr6_1:27182661-27182680 None:intergenic 45.0%
! TCAGCAATCCGTTTGGTGAT+TGG - chr6_1:27182697-27182716 None:intergenic 45.0%
TGTCATGTCAGCAATCCGTT+TGG - chr6_1:27182704-27182723 None:intergenic 45.0%
!! ATGGATTGGGCCAAACGAAA+TGG + chr6_1:27182751-27182770 Msa0880500:intron 45.0%
! TGGATTGGGCCAAACGAAAT+GGG + chr6_1:27182752-27182771 Msa0880500:intron 45.0%
!! AATGGGTTAGATCCATGGGT+CGG - chr6_1:27182787-27182806 None:intergenic 45.0%
CAAATCCCTAAGGCTCTGTT+TGG + chr6_1:27182850-27182869 Msa0880500:intron 45.0%
ACTCACAGATGATTGACCTG+GGG - chr6_1:27183099-27183118 None:intergenic 45.0%
CTACTCACAGATGATTGACC+TGG - chr6_1:27183101-27183120 None:intergenic 45.0%
! CAGAGAAGATGAAGGCATGT+TGG + chr6_1:27183382-27183401 Msa0880500:intron 45.0%
GGAATGGTGCGTGCTAAAAT+TGG + chr6_1:27183431-27183450 Msa0880500:intron 45.0%
!! TTGGGAGGTATCTGATGGAA+TGG - chr6_1:27183502-27183521 None:intergenic 45.0%
!! CCAATTTGGGAGGTATCTGA+TGG - chr6_1:27183507-27183526 None:intergenic 45.0%
CCATCAGATACCTCCCAAAT+TGG + chr6_1:27183504-27183523 Msa0880500:intron 45.0%
TTCATTCCACCCAATTTGGG+AGG - chr6_1:27183517-27183536 None:intergenic 45.0%
TGGAATGGAATGGAGTGTGA+TGG - chr6_1:27183577-27183596 None:intergenic 45.0%
GGAATGGAATGGAATGGAGT+GGG - chr6_1:27183581-27183600 None:intergenic 45.0%
TGGAATGGAATGGAATGGAG+TGG - chr6_1:27183641-27183660 None:intergenic 45.0%
! TGGAGAGTGATGGAATGGAA+TGG - chr6_1:27183651-27183670 None:intergenic 45.0%
GTGACTAGGAAACATGCAAG+AGG - chr6_1:27183950-27183969 None:intergenic 45.0%
! TAAAGATGTGTTGGCCCCTA+AGG - chr6_1:27184163-27184182 None:intergenic 45.0%
TTGAAGGTTAAGGAGGAGAG+TGG + chr6_1:27184202-27184221 Msa0880500:intron 45.0%
CAAGTACCAAAACCCAGTTC+GGG - chr6_1:27184298-27184317 None:intergenic 45.0%
CCAAGTACCAAAACCCAGTT+CGG - chr6_1:27184299-27184318 None:intergenic 45.0%
!! ACTGGGTTTTGGTACTTGGA+TGG + chr6_1:27184300-27184319 Msa0880500:intron 45.0%
TTCTTAACGAGATGCTGACG+TGG - chr6_1:27184529-27184548 None:intergenic 45.0%
CTCGTTAAGAAATTGACGGC+AGG + chr6_1:27184538-27184557 Msa0880500:intron 45.0%
! CACACCATTTTGTCAGTGTG+CGG - chr6_1:27185088-27185107 None:intergenic 45.0%
TTTGTTGAACGCTTGCGCAA+AGG + chr6_1:27185109-27185128 Msa0880500:intron 45.0%
! AGGAGAGAGAAGTATGTCGA+GGG + chr6_1:27185681-27185700 Msa0880500:intron 45.0%
ACTTTAGTCCCTGAATCGGA+AGG + chr6_1:27185818-27185837 Msa0880500:intron 45.0%
CTTTAGTCCCTGAATCGGAA+GGG + chr6_1:27185819-27185838 Msa0880500:intron 45.0%
TCCCTGAAATTGACCATGCA+GGG + chr6_1:27185980-27185999 Msa0880500:intron 45.0%
TCCCTGCATGGTCAATTTCA+GGG - chr6_1:27185984-27186003 None:intergenic 45.0%
ATTGCAAAACAGTCCCTGCA+TGG - chr6_1:27185996-27186015 None:intergenic 45.0%
GACGAATCTTCTCCCATTCA+TGG + chr6_1:27186040-27186059 Msa0880500:intron 45.0%
! CGACATACAATTTAGGACGG+AGG - chr6_1:27186113-27186132 None:intergenic 45.0%
AGCAGAATCAGTGACAATGG+GGG - chr6_1:27187022-27187041 None:intergenic 45.0%
GAGCAGAATCAGTGACAATG+GGG - chr6_1:27187023-27187042 None:intergenic 45.0%
GGAGCAGAATCAGTGACAAT+GGG - chr6_1:27187024-27187043 None:intergenic 45.0%
GCTTATGAGTATGCTAGACG+AGG + chr6_1:27187532-27187551 Msa0880500:CDS 45.0%
TCTAGTAGCAGTGGCTGATA+TGG + chr6_1:27187591-27187610 Msa0880500:CDS 45.0%
TATTGGTGCAGATGTGACCA+AGG + chr6_1:27187645-27187664 Msa0880500:CDS 45.0%
CCAAGGTTGAAGACAGTAAG+CGG + chr6_1:27187662-27187681 Msa0880500:CDS 45.0%
GTTTCATGCAGTGGATCATC+TGG + chr6_1:27187788-27187807 Msa0880500:intron 45.0%
CTGGAATTATTGGGGTTCCA+AGG + chr6_1:27187820-27187839 Msa0880500:CDS 45.0%
CATGGTCGTTGTTGCAAAAG+TGG + chr6_1:27188300-27188319 Msa0880500:intron 45.0%
ATAGTCGTTGCTTCAGCTTG+TGG + chr6_1:27188439-27188458 Msa0880500:CDS 45.0%
TCAAAACAGACCTGGCATTC+AGG + chr6_1:27188725-27188744 Msa0880500:CDS 45.0%
CAAAACAGACCTGGCATTCA+GGG + chr6_1:27188726-27188745 Msa0880500:CDS 45.0%
CATTGAAGATGAGGCTACTC+TGG + chr6_1:27188750-27188769 Msa0880500:CDS 45.0%
! TACTCTGGGAAGACTTCCAT+TGG + chr6_1:27188765-27188784 Msa0880500:CDS 45.0%
! ACTCTGGGAAGACTTCCATT+GGG + chr6_1:27188766-27188785 Msa0880500:CDS 45.0%
TGTGCCAAGGACATAGTGAA+AGG + chr6_1:27188802-27188821 Msa0880500:CDS 45.0%
TGCACCTTTCACTATGTCCT+TGG - chr6_1:27188809-27188828 None:intergenic 45.0%
! ACATAGTGAAAGGTGCATGC+AGG + chr6_1:27188812-27188831 Msa0880500:CDS 45.0%
! CATAGTGAAAGGTGCATGCA+GGG + chr6_1:27188813-27188832 Msa0880500:CDS 45.0%
! ATAGTGAAAGGTGCATGCAG+GGG + chr6_1:27188814-27188833 Msa0880500:CDS 45.0%
TGTGGTGAAAAGAGGAGGAT+TGG - chr6_1:27189329-27189348 None:intergenic 45.0%
!! AAGAAATTTAATTATAAAAA+TGG + chr6_1:27181126-27181145 Msa0880500:intron 5.0%
!! GTTAAATATTTATTATAAAT+AGG + chr6_1:27186507-27186526 Msa0880500:intron 5.0%
ATGGAGGAGCTACTAGGTTC+AGG - chr6_1:27179533-27179552 None:intergenic 50.0%
AGGTGAATGGAGGAGCTACT+AGG - chr6_1:27179539-27179558 None:intergenic 50.0%
ACTGGTGCTTCCTCTGGTAT+TGG + chr6_1:27179666-27179685 Msa0880500:CDS 50.0%
! TGCTTCCTCTGGTATTGGAG+AGG + chr6_1:27179671-27179690 Msa0880500:CDS 50.0%
CACCAATTGGAGACCTCTCA+TGG + chr6_1:27180127-27180146 Msa0880500:CDS 50.0%
AGTAAACGCTACTACCCTGC+AGG + chr6_1:27180467-27180486 Msa0880500:intron 50.0%
GTTGAAGTTGGAGCAGACGT+AGG + chr6_1:27180531-27180550 Msa0880500:CDS 50.0%
TGAAGTGAGTGCAACTCCAG+TGG + chr6_1:27180759-27180778 Msa0880500:CDS 50.0%
GAAGTGAGTGCAACTCCAGT+GGG + chr6_1:27180760-27180779 Msa0880500:CDS 50.0%
CATTCACTCACTGATCCCAC+TGG - chr6_1:27180778-27180797 None:intergenic 50.0%
GGTATTTGACTGCACCAGCA+TGG + chr6_1:27180836-27180855 Msa0880500:CDS 50.0%
TTGCTAGGTGCTTCTCTTGC+TGG - chr6_1:27180952-27180971 None:intergenic 50.0%
TAGATAGGCTAGGTCAGACG+AGG - chr6_1:27181812-27181831 None:intergenic 50.0%
TTGCTAGAAGCCACCCATGA+AGG - chr6_1:27182041-27182060 None:intergenic 50.0%
!! ATGGGTTAGATCCATGGGTC+GGG - chr6_1:27182786-27182805 None:intergenic 50.0%
ACTAACGGAATGGAGCGGAA+CGG + chr6_1:27182883-27182902 Msa0880500:intron 50.0%
CGGAATGGAACGGAATGGAA+CGG + chr6_1:27182903-27182922 Msa0880500:intron 50.0%
TGGAACGGAATGGAACGGAA+CGG + chr6_1:27182908-27182927 Msa0880500:intron 50.0%
CAGATACCTCCCAAATTGGG+TGG + chr6_1:27183508-27183527 Msa0880500:intron 50.0%
TGGAATGGAATGGAGTGGGA+TGG - chr6_1:27183636-27183655 None:intergenic 50.0%
AGATTGCGCAAGGAGGAAGA+AGG - chr6_1:27183708-27183727 None:intergenic 50.0%
GAAAGGTGAGAGATTGCGCA+AGG - chr6_1:27183718-27183737 None:intergenic 50.0%
GAAGAAGAGAGATGGCAAGG+AGG - chr6_1:27183758-27183777 None:intergenic 50.0%
CTCGGCCACCATAGATGAAA+AGG - chr6_1:27184029-27184048 None:intergenic 50.0%
AGGGGCCAACACATCTTTAG+AGG + chr6_1:27184164-27184183 Msa0880500:intron 50.0%
!! CCGAACTGGGTTTTGGTACT+TGG + chr6_1:27184296-27184315 Msa0880500:intron 50.0%
!!! GTTTTGTTTGGCATGGCAGC+AGG - chr6_1:27184740-27184759 None:intergenic 50.0%
AGCTCCGCACACTGACAAAA+TGG + chr6_1:27185081-27185100 Msa0880500:intron 50.0%
CTTGCGCAAAGGACATGTCT+TGG + chr6_1:27185120-27185139 Msa0880500:intron 50.0%
TACAGACTACACGCAGACCA+AGG - chr6_1:27185170-27185189 None:intergenic 50.0%
ATGCTGGTCATGAGCTATCC+CGG - chr6_1:27185330-27185349 None:intergenic 50.0%
GAGTTCGATCTGATCCATGC+TGG - chr6_1:27185346-27185365 None:intergenic 50.0%
! GAGGAGAGAGAAGTATGTCG+AGG + chr6_1:27185680-27185699 Msa0880500:intron 50.0%
GACGAATCCCTTCCGATTCA+GGG - chr6_1:27185829-27185848 None:intergenic 50.0%
TGACGAATCCCTTCCGATTC+AGG - chr6_1:27185830-27185849 None:intergenic 50.0%
GTCCCTGAAATTGACCATGC+AGG + chr6_1:27185979-27185998 Msa0880500:intron 50.0%
GTCCCTGCATGGTCAATTTC+AGG - chr6_1:27185985-27186004 None:intergenic 50.0%
GGGAGCAGAATCAGTGACAA+TGG - chr6_1:27187025-27187044 None:intergenic 50.0%
CTAATCACTGGAGCAGCTTC+TGG + chr6_1:27187133-27187152 Msa0880500:CDS 50.0%
!! ACTGGAGCAGCTTCTGGAAT+TGG + chr6_1:27187139-27187158 Msa0880500:CDS 50.0%
AGTATGCTAGACGAGGAGCA+AGG + chr6_1:27187539-27187558 Msa0880500:CDS 50.0%
TAGCAGTGGCTGATATGGCA+AGG + chr6_1:27187596-27187615 Msa0880500:CDS 50.0%
GCTGATATGGCAAGGTCTCT+TGG + chr6_1:27187604-27187623 Msa0880500:CDS 50.0%
CCGCTTACTGTCTTCAACCT+TGG - chr6_1:27187665-27187684 None:intergenic 50.0%
GTCACGCACATCGTTCAAAG+TGG - chr6_1:27187708-27187727 None:intergenic 50.0%
TCGTTGCTTCAGCTTGTGGA+TGG + chr6_1:27188443-27188462 Msa0880500:CDS 50.0%
GGCATAACAATTGCCACACC+TGG + chr6_1:27188697-27188716 Msa0880500:CDS 50.0%
CTTCAATGACCCTGAATGCC+AGG - chr6_1:27188738-27188757 None:intergenic 50.0%
TGGACCCAACGACACATCTT+TGG + chr6_1:27188913-27188932 Msa0880500:CDS 50.0%
GGACCCAACGACACATCTTT+GGG + chr6_1:27188914-27188933 Msa0880500:CDS 50.0%
GGTGAAAAGAGGAGGATTGG+TGG - chr6_1:27189326-27189345 None:intergenic 50.0%
CCATAGCTGCCTTGCAAATG+AGG - chr6_1:27189484-27189503 None:intergenic 50.0%
CCTCATTTGCAAGGCAGCTA+TGG + chr6_1:27189481-27189500 Msa0880500:three_prime_UTR 50.0%
CACATCACTGGTGCTTCCTC+TGG + chr6_1:27179660-27179679 Msa0880500:CDS 55.0%
!! CCTCTGCTGTTTCTGAGGTG+TGG - chr6_1:27180283-27180302 None:intergenic 55.0%
CCACACCTCAGAAACAGCAG+AGG + chr6_1:27180280-27180299 Msa0880500:CDS 55.0%
!! TGCTGCTTTGCTTGCCTGCA+GGG - chr6_1:27180484-27180503 None:intergenic 55.0%
!! ATGCTGCTTTGCTTGCCTGC+AGG - chr6_1:27180485-27180504 None:intergenic 55.0%
! ACGCCCATTTTGCCTTCTGG+TGG - chr6_1:27180618-27180637 None:intergenic 55.0%
ACCAGAAGGCAAAATGGGCG+TGG + chr6_1:27180617-27180636 Msa0880500:CDS 55.0%
! TCCACGCCCATTTTGCCTTC+TGG - chr6_1:27180621-27180640 None:intergenic 55.0%
GGGTAAAATGACCCGACCCA+TGG + chr6_1:27182772-27182791 Msa0880500:intron 55.0%
TGGAGCGGAACGGAATGGAA+CGG + chr6_1:27182893-27182912 Msa0880500:intron 55.0%
CGGAACGGAATGGAACGGAA+TGG + chr6_1:27182898-27182917 Msa0880500:intron 55.0%
CGGAATGGAACGGAACGGAA+TGG + chr6_1:27182913-27182932 Msa0880500:intron 55.0%
TGGAACGGAACGGAATGGAG+CGG + chr6_1:27182918-27182937 Msa0880500:intron 55.0%
AGGTGAGAGATTGCGCAAGG+AGG - chr6_1:27183715-27183734 None:intergenic 55.0%
GGGGAAGAAGAGAGATGGCA+AGG - chr6_1:27183761-27183780 None:intergenic 55.0%
! TAAGGTGCTCGAACCCGAAC+TGG + chr6_1:27184282-27184301 Msa0880500:intron 55.0%
! AAGGTGCTCGAACCCGAACT+GGG + chr6_1:27184283-27184302 Msa0880500:intron 55.0%
! CTCGAACCCGAACTGGGTTT+TGG + chr6_1:27184289-27184308 Msa0880500:intron 55.0%
ATGCTGACGTGGCACCAAGT+GGG - chr6_1:27184518-27184537 None:intergenic 55.0%
GGGATAGCTCATGACCAGCA+TGG + chr6_1:27185329-27185348 Msa0880500:intron 55.0%
GTAGCCATACCAGATCGGGT+CGG + chr6_1:27185417-27185436 Msa0880500:intron 55.0%
CATACCAGATCGGGTCGGAT+CGG + chr6_1:27185422-27185441 Msa0880500:intron 55.0%
!! AGCAGCTTCTGGAATTGGCG+AGG + chr6_1:27187144-27187163 Msa0880500:CDS 55.0%
!! TGGGGTTCCAAGGTTGGTAG+AGG + chr6_1:27187830-27187849 Msa0880500:CDS 55.0%
!! GAAGGTGCTTTATCCCCACC+TGG + chr6_1:27188885-27188904 Msa0880500:CDS 55.0%
! TTTATCCCCACCTGGTGGAC+TGG + chr6_1:27188893-27188912 Msa0880500:CDS 55.0%
CTTGGATGCCTGCACCCAGA+AGG + chr6_1:27180332-27180351 Msa0880500:CDS 60.0%
CGGAATGGAGCGGAACGGAA+TGG + chr6_1:27182888-27182907 Msa0880500:intron 60.0%
GATGCTGACGTGGCACCAAG+TGG - chr6_1:27184519-27184538 None:intergenic 60.0%
CGATCCGACCCGATCTGGTA+TGG - chr6_1:27185424-27185443 None:intergenic 60.0%
TAGACCGATCCGACCCGATC+TGG - chr6_1:27185429-27185448 None:intergenic 60.0%
!! GGACGGAGGGAGTACTCTAC+TGG - chr6_1:27186099-27186118 None:intergenic 60.0%
! AACTTCTGGGGAGCAGCTCG+TGG + chr6_1:27188370-27188389 Msa0880500:CDS 60.0%
GGTGCTTTATCCCCACCTGG+TGG + chr6_1:27188888-27188907 Msa0880500:CDS 60.0%
TTGGGTCCAGTCCACCAGGT+GGG - chr6_1:27188902-27188921 None:intergenic 60.0%
TGGGTCCAGTCCACCAGGTG+GGG - chr6_1:27188901-27188920 None:intergenic 65.0%
GTTGGGTCCAGTCCACCAGG+TGG - chr6_1:27188903-27188922 None:intergenic 65.0%
GTCGTTGGGTCCAGTCCACC+AGG - chr6_1:27188906-27188925 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 27179510 27189514 27179510 ID=Msa0880500;Name=Msa0880500
chr6_1 mRNA 27179510 27189514 27179510 ID=Msa0880500-mRNA-1;Parent=Msa0880500;Name=Msa0880500-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.4|0.36|1|0.9|0.81|11|503|623
chr6_1 exon 27179510 27179692 27179510 ID=Msa0880500-mRNA-1:exon:6656;Parent=Msa0880500-mRNA-1
chr6_1 exon 27179776 27179968 27179776 ID=Msa0880500-mRNA-1:exon:6657;Parent=Msa0880500-mRNA-1
chr6_1 exon 27180063 27180148 27180063 ID=Msa0880500-mRNA-1:exon:6658;Parent=Msa0880500-mRNA-1
chr6_1 exon 27180235 27180366 27180235 ID=Msa0880500-mRNA-1:exon:6659;Parent=Msa0880500-mRNA-1
chr6_1 exon 27180489 27180656 27180489 ID=Msa0880500-mRNA-1:exon:6660;Parent=Msa0880500-mRNA-1
chr6_1 exon 27180757 27181004 27180757 ID=Msa0880500-mRNA-1:exon:6661;Parent=Msa0880500-mRNA-1
chr6_1 exon 27187096 27187165 27187096 ID=Msa0880500-mRNA-1:exon:6662;Parent=Msa0880500-mRNA-1
chr6_1 exon 27187526 27187718 27187526 ID=Msa0880500-mRNA-1:exon:6663;Parent=Msa0880500-mRNA-1
chr6_1 exon 27187799 27187887 27187799 ID=Msa0880500-mRNA-1:exon:6664;Parent=Msa0880500-mRNA-1
chr6_1 exon 27188364 27188495 27188364 ID=Msa0880500-mRNA-1:exon:6665;Parent=Msa0880500-mRNA-1
chr6_1 exon 27188634 27189514 27188634 ID=Msa0880500-mRNA-1:exon:6666;Parent=Msa0880500-mRNA-1
chr6_1 CDS 27179510 27179692 27179510 ID=Msa0880500-mRNA-1:cds;Parent=Msa0880500-mRNA-1
chr6_1 CDS 27179776 27179968 27179776 ID=Msa0880500-mRNA-1:cds;Parent=Msa0880500-mRNA-1
chr6_1 CDS 27180063 27180148 27180063 ID=Msa0880500-mRNA-1:cds;Parent=Msa0880500-mRNA-1
chr6_1 CDS 27180235 27180366 27180235 ID=Msa0880500-mRNA-1:cds;Parent=Msa0880500-mRNA-1
chr6_1 CDS 27180489 27180656 27180489 ID=Msa0880500-mRNA-1:cds;Parent=Msa0880500-mRNA-1
chr6_1 CDS 27180757 27181004 27180757 ID=Msa0880500-mRNA-1:cds;Parent=Msa0880500-mRNA-1
chr6_1 CDS 27187096 27187165 27187096 ID=Msa0880500-mRNA-1:cds;Parent=Msa0880500-mRNA-1
chr6_1 CDS 27187526 27187718 27187526 ID=Msa0880500-mRNA-1:cds;Parent=Msa0880500-mRNA-1
chr6_1 CDS 27187799 27187887 27187799 ID=Msa0880500-mRNA-1:cds;Parent=Msa0880500-mRNA-1
chr6_1 CDS 27188364 27188495 27188364 ID=Msa0880500-mRNA-1:cds;Parent=Msa0880500-mRNA-1
chr6_1 CDS 27188634 27189011 27188634 ID=Msa0880500-mRNA-1:cds;Parent=Msa0880500-mRNA-1
chr6_1 three_prime_UTR 27189012 27189514 27189012 ID=Msa0880500-mRNA-1:three_prime_utr;Parent=Msa0880500-mRNA-1
Gene Sequence

>Msa0880500

ATGGACCTTATTCATAAGTTCCTGAACCTAGTAGCTCCTCCATTCACCTTCTTTTCCTTACTCCTTTTCTTACCACCATATTGGACCTTCAAATTCTTCCTTTCCATTATCTTTACATTCTTCCCTGAAAATGTTGCTGGTAAAGTTGTTCACATCACTGGTGCTTCCTCTGGTATTGGAGAGCATTTGGCTTACGAGTATGCTAAGAGAGGTGCACGCTTAGCACTTTCTGCTAGAAGAGATACAGCACTCCGTGAAGTTGCTGATAGAGCTCGTGATTTTGGTTCTCCTGATGTTATTATAATGCGTGCAGATGTTTCTAAAGTTGATGATTGTAGGCGTTTGGTCGATGAAACCGTTAACCATTTTGGTAGACTGGATCATTTGGTAAACAATGCTGCAATCAGTGCTGCCATGATGTTTGAAGATGTAACTGATATCACCAATTGGAGACCTCTCATGGACACAAACTTTTGGGGATCAGTTTACACAACCCGTTTTGCTTTACCACACCTCAGAAACAGCAGAGGCAAAATTGTGGTCCTTTCATCAATTGATTCTTGGATGCCTGCACCCAGAAGGAGTATATATAATGCAAGCAAAGCAGCATTAGTAAGTCTTTATGAAACATTGAGGGTTGAAGTTGGAGCAGACGTAGGTGTAACAATTGTTACACCAGGTTACATAGAATCTGAATTAACCAAAGGCAAAGTCTTATTGCCACCAGAAGGCAAAATGGGCGTGGACCAAGATATGAGAGATGTTGAAGTGAGTGCAACTCCAGTGGGATCAGTGAGTGAATGTGCAAAATCAATAGTGAATGGTACATTGAGGGGAGATAGGTATTTGACTGCACCAGCATGGTTTAGAATGACATATGTTGTGAAAGTGTTGTGTCCAGAATTGTTGGAGTGGGGTTTCAGAATGTTGTACTTGACTAGATCAAGTAATACTCCAGCAAGAGAAGCACCTAGCAAAAAGATTTTGGATGCTACTGGAATCAAAAACGTGTTGGTGCGAACAGAAAATATGGCAAGAAAAGTTGTACTAATCACTGGAGCAGCTTCTGGAATTGGCGAGCAACTAGCTTATGAGTATGCTAGACGAGGAGCAAGGTTGTCACTTGTTGACATTAAAATGGAGAATCTAGTAGCAGTGGCTGATATGGCAAGGTCTCTTGGTTCCCCTGATGTTATCATTATTGGTGCAGATGTGACCAAGGTTGAAGACAGTAAGCGGTTTGTTGATGAAACAGTGAACCACTTTGAACGATTGGATCATCTGGTAAATAATGCTGGAATTATTGGGGTTCCAAGGTTGGTAGAGGATTTTTCGGATTTGTCTAAATACACACAAATTATGGAAACAAACTTCTGGGGAGCAGCTCGTGGCACTTTATATGCAATCCCACATCTTAAAAATAGTAAAGGCAGGATCATAGTCGTTGCTTCAGCTTGTGGATGGTTTCCAATTCCGAGACTCAGTATCTATAACGCTAGTAAGGCAGCGATAATAAGCTTCTTTGAGACTTTAAGAATTGAACTTGGTTGGTCTATTGGCATAACAATTGCCACACCTGGTTTTATCAAAACAGACCTGGCATTCAGGGTCATTGAAGATGAGGCTACTCTGGGAAGACTTCCATTGGGTTCATCAGTTGAATGTGCCAAGGACATAGTGAAAGGTGCATGCAGGGGAGATATGTATGTGACAAACCCTTCATGGGTCAAAGTAATATTTTATTGGAAGGTGCTTTATCCCCACCTGGTGGACTGGACCCAACGACACATCTTTGGGATTTTGACAAACCCTTACCGGAAGAATGATAATCTGCTTATCTCCAAGAGTTACCAAGAGCTTAAGGTAGAATAA
Protein sequence

>Msa0880500

MDLIHKFLNLVAPPFTFFSLLLFLPPYWTFKFFLSIIFTFFPENVAGKVVHITGASSGIGEHLAYEYAKRGARLALSARRDTALREVADRARDFGSPDVIIMRADVSKVDDCRRLVDETVNHFGRLDHLVNNAAISAAMMFEDVTDITNWRPLMDTNFWGSVYTTRFALPHLRNSRGKIVVLSSIDSWMPAPRRSIYNASKAALVSLYETLRVEVGADVGVTIVTPGYIESELTKGKVLLPPEGKMGVDQDMRDVEVSATPVGSVSECAKSIVNGTLRGDRYLTAPAWFRMTYVVKVLCPELLEWGFRMLYLTRSSNTPAREAPSKKILDATGIKNVLVRTENMARKVVLITGAASGIGEQLAYEYARRGARLSLVDIKMENLVAVADMARSLGSPDVIIIGADVTKVEDSKRFVDETVNHFERLDHLVNNAGIIGVPRLVEDFSDLSKYTQIMETNFWGAARGTLYAIPHLKNSKGRIIVVASACGWFPIPRLSIYNASKAAIISFFETLRIELGWSIGITIATPGFIKTDLAFRVIEDEATLGRLPLGSSVECAKDIVKGACRGDMYVTNPSWVKVIFYWKVLYPHLVDWTQRHIFGILTNPYRKNDNLLISKSYQELKVE*