AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0571080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0571080 MtrunA17_Chr8g0386201 97.337 338 9 0 1 338 1 338 0.0 676
Msa0571080 MtrunA17_Chr8g0386201 50.730 274 113 3 342 598 43 311 3.06e-85 270
Msa0571080 MtrunA17_Chr8g0386171 68.139 317 70 1 338 623 46 362 5.29e-151 440
Msa0571080 MtrunA17_Chr8g0386171 43.544 333 143 3 11 311 18 337 1.42e-88 279
Msa0571080 MtrunA17_Chr5g0396351 45.860 314 158 5 1 310 1 306 3.29e-84 268
Msa0571080 MtrunA17_Chr5g0396351 42.966 263 140 3 342 595 43 304 8.46e-64 214
Msa0571080 MtrunA17_Chr8g0386191 84.397 141 3 5 425 562 54 178 4.55e-67 217
Msa0571080 MtrunA17_Chr8g0386191 38.961 154 61 6 126 275 54 178 1.51e-25 104
Msa0571080 MtrunA17_Chr7g0249571 33.778 225 139 7 43 260 36 257 5.46e-24 103
Msa0571080 MtrunA17_Chr7g0249571 32.995 197 126 5 340 531 34 229 1.91e-16 80.9
Msa0571080 MtrunA17_Chr4g0025981 33.816 207 122 6 347 545 44 243 5.16e-21 94.7
Msa0571080 MtrunA17_Chr4g0025981 25.652 230 151 6 47 266 43 262 1.53e-14 75.1
Msa0571080 MtrunA17_Chr4g0026001 31.683 202 131 4 347 544 17 215 6.99e-20 90.1
Msa0571080 MtrunA17_Chr4g0026001 26.512 215 142 7 47 253 16 222 1.87e-13 71.2
Msa0571080 MtrunA17_Chr3g0124471 29.134 254 153 9 49 289 30 269 8.56e-19 87.4
Msa0571080 MtrunA17_Chr4g0025971 32.683 205 124 5 334 533 7 202 4.10e-18 84.7
Msa0571080 MtrunA17_Chr4g0025971 26.606 218 138 5 47 253 16 222 9.46e-14 72.0
Msa0571080 MtrunA17_Chr7g0267011 31.250 192 119 6 347 532 11 195 1.01e-17 82.0
Msa0571080 MtrunA17_Chr7g0267011 28.061 196 129 5 43 232 6 195 4.83e-17 80.1
Msa0571080 MtrunA17_Chr7g0244061 29.956 227 143 8 347 562 32 253 3.62e-17 82.8
Msa0571080 MtrunA17_Chr7g0244061 27.368 190 129 4 42 226 26 211 1.63e-11 65.9
Msa0571080 MtrunA17_Chr8g0357481 31.390 223 137 6 40 250 9 227 7.11e-17 81.6
Msa0571080 MtrunA17_Chr6g0459281 29.851 201 130 5 344 538 13 208 8.19e-17 80.9
Msa0571080 MtrunA17_Chr6g0459281 28.426 197 129 6 45 234 13 204 3.36e-14 73.2
Msa0571080 MtrunA17_Chr4g0075531 27.111 225 146 4 41 252 3 222 2.29e-16 79.3
Msa0571080 MtrunA17_Chr3g0122901 27.232 224 147 7 43 263 73 283 2.89e-16 80.5
Msa0571080 MtrunA17_Chr3g0122901 30.000 210 135 8 348 550 79 283 8.74e-13 69.7
Msa0571080 MtrunA17_Chr3g0124481 28.390 236 149 9 63 289 30 254 4.27e-16 79.3
Msa0571080 MtrunA17_Chr3g0124481 34.194 155 95 4 396 548 58 207 6.30e-15 75.9
Msa0571080 MtrunA17_Chr4g0054341 30.964 197 127 5 346 539 4 194 6.54e-16 78.6
Msa0571080 MtrunA17_Chr4g0054341 26.804 194 134 6 48 238 5 193 1.91e-12 68.2
Msa0571080 MtrunA17_Chr7g0268591 33.171 205 120 8 336 531 22 218 8.09e-16 78.6
Msa0571080 MtrunA17_Chr6g0459351 29.353 201 133 6 344 539 13 209 8.27e-16 78.2
Msa0571080 MtrunA17_Chr4g0044131 30.645 186 116 6 347 526 11 189 1.19e-15 77.8
Msa0571080 MtrunA17_Chr4g0044131 28.495 186 121 5 47 226 10 189 1.34e-15 77.4
Msa0571080 MtrunA17_Chr2g0287951 30.180 222 132 7 45 250 33 247 1.55e-15 78.2
Msa0571080 MtrunA17_Chr1g0191751 28.061 196 132 4 42 229 97 291 1.75e-15 78.6
Msa0571080 MtrunA17_Chr1g0191751 28.326 233 152 6 341 560 98 328 1.47e-13 72.4
Msa0571080 MtrunA17_Chr7g0272961 26.400 250 171 6 40 277 34 282 2.26e-15 77.0
Msa0571080 MtrunA17_Chr7g0272961 28.431 204 137 4 347 543 43 244 3.51e-12 67.8
Msa0571080 MtrunA17_Chr7g0239491 30.088 226 143 8 47 267 17 232 1.08e-14 74.7
Msa0571080 MtrunA17_Chr4g0028921 28.358 201 135 6 43 235 9 208 2.40e-14 73.9
Msa0571080 MtrunA17_Chr7g0239481 29.694 229 147 8 44 267 14 233 3.36e-14 73.2
Msa0571080 MtrunA17_Chr7g0239511 29.310 232 144 9 44 267 15 234 5.14e-14 72.8
Msa0571080 MtrunA17_Chr4g0045061 28.141 199 132 3 350 537 10 208 5.78e-14 75.1
Msa0571080 MtrunA17_Chr4g0045061 27.500 200 133 4 46 233 5 204 1.16e-13 74.3
Msa0571080 MtrunA17_Chr4g0028911 27.861 201 136 6 43 235 9 208 9.63e-14 72.0
Msa0571080 MtrunA17_Chr4g0045041 28.141 199 132 3 350 537 10 208 1.24e-13 73.9
Msa0571080 MtrunA17_Chr4g0045041 26.500 200 135 4 46 233 5 204 7.29e-13 71.6
Msa0571080 MtrunA17_Chr6g0459261 28.788 198 127 6 45 234 25 216 1.64e-13 71.2
Msa0571080 MtrunA17_Chr6g0459261 27.363 201 135 5 344 538 25 220 1.95e-12 68.2
Msa0571080 MtrunA17_Chr7g0266981 29.592 196 129 5 347 538 16 206 2.79e-13 70.5
Msa0571080 MtrunA17_Chr1g0171831 27.000 200 134 5 48 235 17 216 4.31e-13 69.7
Msa0571080 MtrunA17_Chr7g0270451 34.328 201 115 8 342 534 4 195 9.63e-13 68.9
Msa0571080 MtrunA17_Chr4g0044111 29.082 196 130 5 347 538 16 206 1.73e-12 68.2
Msa0571080 MtrunA17_Chr6g0459301 26.778 239 153 6 344 576 14 236 3.26e-12 67.4
Msa0571080 MtrunA17_Chr7g0239501 29.075 227 151 7 44 267 15 234 3.48e-12 67.4
Msa0571080 MtrunA17_Chr7g0266891 28.372 215 140 6 342 547 5 214 5.89e-12 66.6
Msa0571080 MtrunA17_Chr7g0267001 27.568 185 105 5 347 526 11 171 7.04e-12 66.2
Msa0571080 MtrunA17_Chr4g0040371 28.571 210 133 5 339 537 9 212 7.79e-12 66.6
Msa0571080 MtrunA17_Chr4g0040371 27.411 197 131 5 42 233 16 205 5.42e-11 63.9
Msa0571080 MtrunA17_Chr7g0252031 27.803 223 140 8 347 562 38 246 2.93e-11 65.1
Msa0571080 MtrunA17_Chr7g0259521 29.439 214 138 5 347 547 9 222 3.43e-11 64.3
Msa0571080 MtrunA17_Chr7g0239451 27.232 224 153 6 47 267 18 234 4.41e-11 63.9
Msa0571080 MtrunA17_Chr7g0247011 31.724 145 87 3 52 184 11 155 4.55e-11 64.3
Msa0571080 MtrunA17_Chr4g0074511 26.425 193 129 6 47 229 42 231 4.62e-11 64.3
Msa0571080 MtrunA17_Chr7g0259531 27.604 192 133 4 48 233 14 205 7.04e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0571080 AT5G50700.1 61.243 338 129 2 1 338 1 336 1.09e-140 413
Msa0571080 AT5G50700.1 48.519 270 126 3 341 598 42 310 1.13e-84 269
Msa0571080 AT5G50600.1 61.243 338 129 2 1 338 1 336 1.09e-140 413
Msa0571080 AT5G50600.1 48.519 270 126 3 341 598 42 310 1.13e-84 269
Msa0571080 AT5G50770.1 49.702 336 167 2 1 336 1 334 1.04e-105 323
Msa0571080 AT5G50770.1 46.067 267 131 3 341 595 42 307 5.42e-75 243
Msa0571080 AT3G47350.1 46.645 313 153 3 1 313 1 299 2.97e-96 298
Msa0571080 AT3G47350.1 49.630 270 131 2 342 609 42 308 1.54e-81 259
Msa0571080 AT5G50590.1 49.175 303 143 2 1 303 1 292 1.17e-93 290
Msa0571080 AT5G50590.1 50.980 255 116 3 341 590 42 292 7.44e-79 252
Msa0571080 AT5G50690.1 49.175 303 143 2 1 303 1 292 1.17e-93 290
Msa0571080 AT5G50690.1 50.980 255 116 3 341 590 42 292 7.44e-79 252
Msa0571080 AT3G47360.1 46.326 313 155 2 1 313 1 300 4.57e-91 284
Msa0571080 AT3G47360.1 49.259 270 132 4 342 609 43 309 3.45e-78 251
Msa0571080 AT4G10020.1 45.912 318 165 4 1 316 2 314 3.30e-87 277
Msa0571080 AT4G10020.1 44.569 267 138 4 336 593 39 304 6.20e-68 226
Msa0571080 AT3G47350.2 49.117 283 128 4 1 283 1 267 6.18e-86 271
Msa0571080 AT3G47350.2 51.121 223 104 2 342 562 42 261 2.02e-67 223
Msa0571080 AT5G50590.2 53.556 239 111 0 1 239 1 239 5.30e-80 253
Msa0571080 AT5G50590.2 56.250 192 83 1 340 531 41 231 4.08e-66 217
Msa0571080 AT5G50690.2 53.556 239 111 0 1 239 1 239 5.30e-80 253
Msa0571080 AT5G50690.2 56.250 192 83 1 340 531 41 231 4.08e-66 217
Msa0571080 AT3G47350.3 38.658 313 134 4 1 313 1 255 5.83e-68 222
Msa0571080 AT3G47350.3 42.222 270 107 3 342 609 42 264 1.44e-56 192
Msa0571080 AT3G03330.1 34.649 228 136 7 17 231 6 233 5.73e-24 103
Msa0571080 AT3G03330.1 35.238 210 125 7 330 531 27 233 2.85e-18 87.0
Msa0571080 AT5G65205.1 34.211 190 111 7 49 233 10 190 2.15e-21 95.1
Msa0571080 AT5G65205.1 30.244 205 132 5 348 549 10 206 2.08e-16 80.5
Msa0571080 AT5G10050.1 31.606 193 122 5 49 238 9 194 2.93e-21 94.7
Msa0571080 AT5G10050.1 31.373 204 126 6 348 548 9 201 5.42e-20 90.9
Msa0571080 AT1G49670.2 35.204 196 116 4 350 534 10 205 2.75e-18 89.4
Msa0571080 AT1G49670.2 24.490 196 136 3 52 235 11 206 1.69e-12 70.9
Msa0571080 AT1G49670.1 35.204 196 116 4 350 534 10 205 2.95e-18 89.4
Msa0571080 AT1G49670.1 24.490 196 136 3 52 235 11 206 1.82e-12 70.9
Msa0571080 AT1G24360.1 28.718 195 134 5 43 234 72 264 1.88e-16 81.3
Msa0571080 AT1G24360.1 30.622 209 135 7 348 550 78 282 5.08e-14 73.9
Msa0571080 AT3G05260.1 29.798 198 125 7 40 227 31 224 1.97e-16 80.9
Msa0571080 AT3G05260.1 28.270 237 149 6 324 542 6 239 3.41e-13 70.9
Msa0571080 AT1G54870.1 29.648 199 129 6 40 229 76 272 1.99e-16 81.3
Msa0571080 AT1G54870.1 29.297 256 155 8 347 588 85 328 5.00e-14 74.3
Msa0571080 AT1G63380.2 28.934 197 132 5 48 236 25 221 2.03e-16 80.5
Msa0571080 AT1G63380.2 25.792 221 152 8 332 541 7 226 4.91e-11 64.7
Msa0571080 AT1G54870.2 29.648 199 129 6 40 229 78 274 2.06e-16 81.3
Msa0571080 AT1G54870.2 29.297 256 155 8 347 588 87 330 4.87e-14 74.3
Msa0571080 AT1G63380.3 28.934 197 132 5 48 236 18 214 2.37e-16 80.1
Msa0571080 AT1G63380.1 28.934 197 132 5 48 236 20 216 3.12e-16 80.1
Msa0571080 AT1G63380.4 28.934 197 132 5 48 236 22 218 3.27e-16 80.1
Msa0571080 AT3G12800.1 30.594 219 129 6 40 243 5 215 3.59e-16 80.1
Msa0571080 AT3G51680.1 32.487 197 119 6 347 533 35 227 6.40e-16 79.3
Msa0571080 AT1G62610.3 28.934 197 132 5 48 236 18 214 2.19e-15 77.4
Msa0571080 AT1G62610.2 28.934 197 132 5 48 236 16 212 2.23e-15 77.4
Msa0571080 AT1G62610.1 28.934 197 132 5 48 236 17 213 2.24e-15 77.4
Msa0571080 AT1G62610.4 28.934 197 132 5 48 236 22 218 2.93e-15 77.0
Msa0571080 AT3G55310.1 28.000 200 127 6 48 235 20 214 3.84e-14 73.6
Msa0571080 AT3G55310.1 26.733 202 140 5 347 541 20 220 1.68e-12 68.9
Msa0571080 AT4G05530.1 26.154 195 130 5 41 229 5 191 8.50e-14 72.4
Msa0571080 AT2G17845.1 27.500 200 133 6 48 236 50 248 1.46e-13 72.4
Msa0571080 AT3G26770.1 28.571 203 136 6 341 539 38 235 1.80e-13 72.0
Msa0571080 AT3G26770.1 28.426 197 131 6 43 234 39 230 2.08e-11 65.9
Msa0571080 AT5G06060.1 29.680 219 136 8 343 550 8 219 2.05e-13 71.2
Msa0571080 AT5G06060.1 27.948 229 147 8 44 267 8 223 4.06e-13 70.5
Msa0571080 AT2G29150.1 30.736 231 137 9 44 267 15 229 2.38e-13 71.2
Msa0571080 AT3G55290.2 28.061 196 134 5 48 236 20 215 2.94e-13 71.2
Msa0571080 AT3G55290.1 28.061 196 134 5 48 236 21 216 3.39e-13 70.9
Msa0571080 AT1G52340.1 30.198 202 130 6 347 541 21 218 1.67e-12 68.9
Msa0571080 AT3G46170.1 27.041 196 136 5 48 236 29 224 1.74e-12 68.9
Msa0571080 AT2G29360.1 30.317 221 131 8 44 247 15 229 1.78e-12 68.6
Msa0571080 AT4G13180.1 25.764 229 149 6 45 255 13 238 4.71e-12 67.4
Msa0571080 AT4G03140.1 33.908 174 102 7 347 515 81 246 5.25e-12 68.2
Msa0571080 AT1G24470.1 29.310 232 140 12 15 233 22 242 5.79e-12 67.8
Msa0571080 AT2G29290.2 30.493 223 133 9 52 267 14 221 6.21e-12 67.0
Msa0571080 AT3G26760.1 31.188 202 122 7 347 540 39 231 6.61e-12 67.4
Msa0571080 AT3G26760.1 25.980 204 143 5 35 234 26 225 9.36e-11 63.9
Msa0571080 AT5G18210.1 26.180 233 148 7 44 255 7 236 7.31e-12 66.6
Msa0571080 AT3G06060.1 31.034 203 114 7 52 238 44 236 9.58e-12 67.0
Msa0571080 AT3G06060.2 31.034 203 114 7 52 238 61 253 1.01e-11 67.4
Msa0571080 AT5G18210.2 26.180 233 148 7 44 255 7 236 1.17e-11 66.2
Msa0571080 AT3G04000.1 27.670 206 135 5 42 233 11 216 1.50e-11 65.9
Msa0571080 AT2G29370.1 28.384 229 146 7 44 267 15 230 3.14e-11 64.7
Msa0571080 AT4G24050.2 29.302 215 118 8 52 237 39 248 3.74e-11 64.7
Msa0571080 AT2G47130.1 28.358 201 134 5 347 544 9 202 4.89e-11 63.9
Msa0571080 AT4G24050.1 29.302 215 118 8 52 237 39 248 7.28e-11 64.3
Msa0571080 AT3G03980.1 26.829 205 137 5 42 233 11 215 8.32e-11 63.5

Find 168 sgRNAs with CRISPR-Local

Find 578 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCAACAAACGGTTCTAATT+TGG 0.141257 4_1:-73548117 Msa0571080:three_prime_UTR
CAAGAAAACACATTTCATTT+AGG 0.152230 4_1:-73548146 Msa0571080:three_prime_UTR
GTAAATAATGCTGGAATTAT+TGG 0.187644 4_1:-73549363 Msa0571080:CDS
TCCCCTGATGTTATCATTAT+TGG 0.195093 4_1:-73549545 Msa0571080:CDS
TTGCTAGGTGCTTCTCTTGC+TGG 0.240546 4_1:+73556541 None:intergenic
TACATTATATATACTCCTTC+TGG 0.243370 4_1:+73557151 None:intergenic
GTCTAAATACACACAAATTA+TGG 0.246179 4_1:-73549307 Msa0571080:intron
GTCACTTGTTGACATTAAAA+TGG 0.249790 4_1:-73549609 Msa0571080:CDS
TAAATAATGCTGGAATTATT+GGG 0.259768 4_1:-73549362 Msa0571080:CDS
CTAATCACTGGAGCAGCTTC+TGG 0.259839 4_1:-73550044 Msa0571080:CDS
TCCTTTCATCAATTGATTCT+TGG 0.265350 4_1:-73557184 Msa0571080:CDS
AAGAAAACACATTTCATTTA+GGG 0.271925 4_1:-73548145 Msa0571080:three_prime_UTR
GATGAAACCGTTAACCATTT+TGG 0.281093 4_1:-73557557 Msa0571080:CDS
ATTGAACTTGGTTGGTCTAT+TGG 0.282291 4_1:-73548499 Msa0571080:CDS
GCTGATAGAGCTCGTGATTT+TGG 0.286452 4_1:-73557644 Msa0571080:CDS
TTTCTCAGGAAACAAACTTC+TGG 0.287027 4_1:-73548817 Msa0571080:intron
TCAAAACAGACCTGGCATTC+AGG 0.295225 4_1:-73548450 Msa0571080:CDS
AAACCCCACTCCAACAATTC+TGG 0.298326 4_1:+73556598 None:intergenic
TGGACCCAACGACACATCTT+TGG 0.322629 4_1:-73548262 Msa0571080:CDS
TTTGGTAGGACACAAACTTT+TGG 0.338368 4_1:-73557271 Msa0571080:intron
CAATAAGACAGTGTGATAAA+AGG 0.349024 4_1:+73548061 None:intergenic
AGGGAAGAATGTAAAGATAA+TGG 0.356930 4_1:+73557881 None:intergenic
CATACATACGTCTACCAAAA+TGG 0.358019 4_1:+73557543 None:intergenic
ACTGGAGCAGCTTCTGGAAT+TGG 0.358733 4_1:-73550038 Msa0571080:CDS
AAGAATTTGAAGGTCCAATA+TGG 0.365021 4_1:+73557909 None:intergenic
TTCTCAGGAAACAAACTTCT+GGG 0.368129 4_1:-73548816 Msa0571080:intron
ATTGCCACCAGAAGGCAAAA+TGG 0.369505 4_1:-73556879 Msa0571080:CDS
TCTAGTAGCAGTGGCTGATA+TGG 0.371464 4_1:-73549582 Msa0571080:CDS
TTTCCAAAGTTGATGATTGT+AGG 0.374144 4_1:-73557589 Msa0571080:CDS
GGACCCAACGACACATCTTT+GGG 0.376556 4_1:-73548261 Msa0571080:CDS
GTTGGTGCGAACAGAAAATA+TGG 0.382305 4_1:-73550081 Msa0571080:CDS
TTGTTACATCTCTCATATCT+TGG 0.383129 4_1:+73556849 None:intergenic
TTCTTCCCTGAAAATGTTGC+TGG 0.384509 4_1:-73557867 Msa0571080:CDS
CATTGAAGATGAGGCTACTC+TGG 0.388998 4_1:-73548425 Msa0571080:CDS
CAAGAGTTACCAAGAGCTTA+AGG 0.391355 4_1:-73548194 Msa0571080:CDS
GTTTCATGCAGTGGATCATC+TGG 0.391549 4_1:-73549385 Msa0571080:intron
TTTATTCTACCTTAAGCTCT+TGG 0.393929 4_1:+73548185 None:intergenic
CTTAAGCTCTTGGTAACTCT+TGG 0.396197 4_1:+73548195 None:intergenic
ATGCATTACAGTGGATCATT+TGG 0.398219 4_1:-73557446 Msa0571080:intron
TAAGCAGATTATCATTCTTC+CGG 0.400439 4_1:+73548221 None:intergenic
GGTTCAGGAACTTATGAATA+AGG 0.407519 4_1:+73557979 None:intergenic
TAGATACTGAGTCTCGGAAT+TGG 0.408361 4_1:+73548704 None:intergenic
TGTATGTGACAAACCCTTCA+TGG 0.413786 4_1:-73548333 Msa0571080:CDS
TGCACCTTTCACTATGTCCT+TGG 0.421028 4_1:+73548369 None:intergenic
TGGCAATAAGACTTTGCCTT+TGG 0.423226 4_1:+73556895 None:intergenic
AGTTGATGATTGTAGGCGTT+TGG 0.425267 4_1:-73557582 Msa0571080:CDS
CACATCACCGGTGCTTCCTC+TGG 0.427479 4_1:-73557834 Msa0571080:CDS
ACCGGTGCTTCCTCTGGTAT+TGG 0.428806 4_1:-73557828 Msa0571080:CDS
GCACCAATAATGATAACATC+AGG 0.433269 4_1:+73549542 None:intergenic
CGTTTAAGATATATTAAAGA+AGG 0.434088 4_1:+73547799 None:intergenic
GCTGATATGGCAAGGTCTCT+TGG 0.434769 4_1:-73549569 Msa0571080:CDS
CCATAGCTGCCTTGCAAATG+AGG 0.434832 4_1:+73547699 None:intergenic
TTTATCCCCACCTGGTGGAC+TGG 0.435024 4_1:-73548282 Msa0571080:CDS
AATATTACTTTGACCCATGA+AGG 0.435612 4_1:+73548319 None:intergenic
CCTCATTTGCAAGGCAGCTA+TGG 0.435684 4_1:-73547699 Msa0571080:three_prime_UTR
ACGTCTACCAAAATGGTTAA+CGG 0.443115 4_1:+73557550 None:intergenic
TCCAATATGGTGGTAAGAAA+AGG 0.443917 4_1:+73557922 None:intergenic
AAAGGTACATGCTAATTAAA+CGG 0.451226 4_1:+73548079 None:intergenic
AATGATATATCAGGCTAGTA+AGG 0.453299 4_1:-73548554 Msa0571080:intron
TCCAAATTAGAACCGTTTGT+TGG 0.453568 4_1:+73548116 None:intergenic
CAAAACAGACCTGGCATTCA+GGG 0.453872 4_1:-73548449 Msa0571080:CDS
GAAAAGGAGTGAGGAAAAGA+AGG 0.455471 4_1:+73557938 None:intergenic
CTTCAATGACCCTGAATGCC+AGG 0.457896 4_1:+73548440 None:intergenic
AGATTATCATTCTTCCGGTA+AGG 0.458492 4_1:+73548226 None:intergenic
AGTGAGGAAAAGAAGGTGAA+TGG 0.465591 4_1:+73557945 None:intergenic
GATCATCTGGTAAATAATGC+TGG 0.468710 4_1:-73549372 Msa0571080:CDS
GCGCTTACTGTCTTCAACCT+TGG 0.472912 4_1:+73549511 None:intergenic
TTAGTGACGTATAATCTTTG+TGG 0.477368 4_1:-73547927 Msa0571080:three_prime_UTR
AGAAAAGTTGTACTAATCAC+TGG 0.477822 4_1:-73550056 Msa0571080:CDS
ACGCCTACAATCATCAACTT+TGG 0.479547 4_1:+73557586 None:intergenic
ATGGAGGAGCTACTAGGTTC+AGG 0.479762 4_1:+73557964 None:intergenic
CTTTAAGAATTGAACTTGGT+TGG 0.480366 4_1:-73548507 Msa0571080:CDS
ACATTATATATACTCCTTCT+GGG 0.481364 4_1:+73557152 None:intergenic
TACTCTGGGAAGACTTCCAT+TGG 0.485275 4_1:-73548410 Msa0571080:CDS
TGAGGTGTGGTAAAGCAAAA+CGG 0.485877 4_1:+73557231 None:intergenic
GTGTCCAGAATTGTTGGAGT+GGG 0.486451 4_1:-73556602 Msa0571080:CDS
TTGCCACCAGAAGGCAAAAT+GGG 0.488945 4_1:-73556878 Msa0571080:CDS
GGCATAACAATTGCCACACC+TGG 0.489859 4_1:-73548478 Msa0571080:CDS
TGGGGTTCCAAGGTTGGTAG+AGG 0.491125 4_1:-73549343 Msa0571080:CDS
TATATACTCCTTCTGGGTGC+AGG 0.491452 4_1:+73557158 None:intergenic
ACATAGTGAAAGGTGCATGC+AGG 0.491624 4_1:-73548363 Msa0571080:CDS
GATTATCATTCTTCCGGTAA+GGG 0.496088 4_1:+73548227 None:intergenic
AAGTCTTTATGAAACATTGA+GGG 0.498519 4_1:-73556981 Msa0571080:CDS
TGTGGTGAAAAGAGGAGGAT+TGG 0.506284 4_1:+73547854 None:intergenic
CCTCTGCTGTTTCTGAGGTG+TGG 0.510515 4_1:+73557218 None:intergenic
CTGGAATTATTGGGGTTCCA+AGG 0.514905 4_1:-73549353 Msa0571080:CDS
GCACGCATTATAATAACATC+AGG 0.515853 4_1:+73557617 None:intergenic
GTTTAAGATATATTAAAGAA+GGG 0.516057 4_1:+73547800 None:intergenic
TAGCTTTAAATTACCATGAG+AGG 0.516356 4_1:+73557358 None:intergenic
GAAACATTGAGGGTTGAAGT+TGG 0.516747 4_1:-73556971 Msa0571080:CDS
ACTCTGGGAAGACTTCCATT+GGG 0.519855 4_1:-73548409 Msa0571080:CDS
ATGGTACATTGAGGGGAGAT+AGG 0.520717 4_1:-73556675 Msa0571080:CDS
GAGGTGTGGTAAAGCAAAAC+GGG 0.520958 4_1:+73557232 None:intergenic
TACCATGAGAGGTCTCCAAT+TGG 0.521548 4_1:+73557369 None:intergenic
AGTGTTGTGTCCAGAATTGT+TGG 0.521927 4_1:-73556608 Msa0571080:CDS
AGGTGAATGGAGGAGCTACT+AGG 0.526268 4_1:+73557958 None:intergenic
AATCCCAAAGATGTGTCGTT+GGG 0.526397 4_1:+73548258 None:intergenic
CATAGTGAAAGGTGCATGCA+GGG 0.526660 4_1:-73548362 Msa0571080:CDS
AATGGAAAGGAAGAATTTGA+AGG 0.527999 4_1:+73557899 None:intergenic
ATAGTCGTTGCTTCAGCTTG+TGG 0.530720 4_1:-73548734 Msa0571080:CDS
TCGTTGCTTCAGCTTGTGGA+TGG 0.531934 4_1:-73548730 Msa0571080:CDS
GTCGTTGGGTCCAGTCCACC+AGG 0.532099 4_1:+73548272 None:intergenic
AATAGTGAATGGTACATTGA+GGG 0.532567 4_1:-73556683 Msa0571080:CDS
ACCAGAAGGCAAAATGGGCG+TGG 0.534597 4_1:-73556873 Msa0571080:CDS
TTAGGGACTTAGCCAACAAA+CGG 0.537764 4_1:-73548128 Msa0571080:three_prime_UTR
TTGGGTCCAGTCCACCAGGT+GGG 0.538985 4_1:+73548276 None:intergenic
GGTGAAAAGAGGAGGATTGG+TGG 0.540680 4_1:+73547857 None:intergenic
GAGACTTTAAGAATTGAACT+TGG 0.549331 4_1:-73548511 Msa0571080:CDS
AAATCCCAAAGATGTGTCGT+TGG 0.552388 4_1:+73548257 None:intergenic
AATTCAGATTCTATGTAACC+TGG 0.554617 4_1:+73556920 None:intergenic
AGTTACATCTTCAAACATCA+TGG 0.555063 4_1:+73557399 None:intergenic
AATTATTGGGGTTCCAAGGT+TGG 0.558074 4_1:-73549349 Msa0571080:CDS
ATGTAACTGATATCACCAAT+TGG 0.561569 4_1:-73557384 Msa0571080:CDS
TAAGTCTTTATGAAACATTG+AGG 0.565380 4_1:-73556982 Msa0571080:CDS
CACCAATTGGAGACCTCTCA+TGG 0.567087 4_1:-73557371 Msa0571080:intron
AAATAATGCTGGAATTATTG+GGG 0.573354 4_1:-73549361 Msa0571080:CDS
TCCAAGAATCAATTGATGAA+AGG 0.573578 4_1:+73557183 None:intergenic
GGTAAAGTTGTTCACATCAC+CGG 0.574641 4_1:-73557846 Msa0571080:CDS
CAATAGTGAATGGTACATTG+AGG 0.574939 4_1:-73556684 Msa0571080:CDS
CATTCACTCACTGATCCCAC+TGG 0.576814 4_1:+73556715 None:intergenic
GAAGGTGCTTTATCCCCACC+TGG 0.576932 4_1:-73548290 Msa0571080:CDS
GTATGTGACAAACCCTTCAT+GGG 0.577043 4_1:-73548332 Msa0571080:CDS
CACCAATAATGATAACATCA+GGG 0.577672 4_1:+73549543 None:intergenic
ATATTACTTTGACCCATGAA+GGG 0.580640 4_1:+73548320 None:intergenic
AACTTCTGGGGAGCAGCTCG+TGG 0.582009 4_1:-73548803 Msa0571080:CDS
TCCAATACCAGAGGAAGCAC+CGG 0.584460 4_1:+73557827 None:intergenic
CTTGGATGCCTGCACCCAGA+AGG 0.586038 4_1:-73557166 Msa0571080:CDS
GAGGAAAAGAAGGTGAATGG+AGG 0.589781 4_1:+73557948 None:intergenic
TATGTCATTCTAAACCATGC+TGG 0.590361 4_1:+73556640 None:intergenic
TGTGCAAAATCAATAGTGAA+TGG 0.591847 4_1:-73556694 Msa0571080:CDS
ATTGAAGATGAGGCTACTCT+GGG 0.592222 4_1:-73548424 Msa0571080:CDS
TGAAGTGAGTGCAACTCCAG+TGG 0.598795 4_1:-73556731 Msa0571080:CDS
GGTATTTGACTGCACCAGCA+TGG 0.600958 4_1:-73556654 Msa0571080:CDS
ACGTTATAGATACTGAGTCT+CGG 0.601954 4_1:+73548698 None:intergenic
ATTCAGGGTCATTGAAGATG+AGG 0.603172 4_1:-73548434 Msa0571080:CDS
TGTCCAGAATTGTTGGAGTG+GGG 0.604050 4_1:-73556601 Msa0571080:CDS
AATGGAGAATCTAGTAGCAG+TGG 0.606093 4_1:-73549591 Msa0571080:CDS
TCTCAGGAAACAAACTTCTG+GGG 0.608091 4_1:-73548815 Msa0571080:intron
AAAGTCTTATTGCCACCAGA+AGG 0.611122 4_1:-73556887 Msa0571080:CDS
TGCTTCCTCTGGTATTGGAG+AGG 0.611269 4_1:-73557823 Msa0571080:intron
TGGTGGTAAGAAAAGGAGTG+AGG 0.611575 4_1:+73557929 None:intergenic
TGGGTCCAGTCCACCAGGTG+GGG 0.616076 4_1:+73548277 None:intergenic
GAAGTGAGTGCAACTCCAGT+GGG 0.616438 4_1:-73556730 Msa0571080:CDS
TTCATCAGTTGAATGTGCCA+AGG 0.618817 4_1:-73548386 Msa0571080:CDS
AGCAGCTTCTGGAATTGGCG+AGG 0.622046 4_1:-73550033 Msa0571080:intron
GTCACGCACATCGTTCAAAG+TGG 0.625407 4_1:+73549468 None:intergenic
TGTGTCCAGAATTGTTGGAG+TGG 0.626150 4_1:-73556603 Msa0571080:CDS
AAACAGCAGAGGCAAAATTG+TGG 0.631748 4_1:-73557207 Msa0571080:CDS
ATAGAATCTGAATTAACCAA+AGG 0.631775 4_1:-73556911 Msa0571080:CDS
GGTGCTTTATCCCCACCTGG+TGG 0.631992 4_1:-73548287 Msa0571080:CDS
TAGCAGTGGCTGATATGGCA+AGG 0.633184 4_1:-73549577 Msa0571080:CDS
ATAGTGAATGGTACATTGAG+GGG 0.634116 4_1:-73556682 Msa0571080:CDS
GGTGTAACAATTGTTACACC+AGG 0.641548 4_1:-73556938 Msa0571080:CDS
CATTCAACTGATGAACCCAA+TGG 0.642419 4_1:+73548394 None:intergenic
AGAATGTAAAGATAATGGAA+AGG 0.645582 4_1:+73557886 None:intergenic
GTTGGGTCCAGTCCACCAGG+TGG 0.645605 4_1:+73548275 None:intergenic
ATAGTAGTACCTCATTTGCA+AGG 0.648988 4_1:-73547708 Msa0571080:three_prime_UTR
GCTTACGAGTATGCTAAGAG+AGG 0.664397 4_1:-73557716 Msa0571080:CDS
AATTTGAAGGTCCAATATGG+TGG 0.665878 4_1:+73557912 None:intergenic
GTTGAAGTTGGAGCAGACGT+AGG 0.674435 4_1:-73556959 Msa0571080:CDS
ACCAATAATGATAACATCAG+GGG 0.676766 4_1:+73549544 None:intergenic
ATAGTGAAAGGTGCATGCAG+GGG 0.678255 4_1:-73548361 Msa0571080:CDS
AGTATGCTAGACGAGGAGCA+AGG 0.694009 4_1:-73549634 Msa0571080:CDS
CCACACCTCAGAAACAGCAG+AGG 0.715008 4_1:-73557218 Msa0571080:CDS
TGTGCCAAGGACATAGTGAA+AGG 0.715969 4_1:-73548373 Msa0571080:CDS
GCTTATGAGTATGCTAGACG+AGG 0.721771 4_1:-73549641 Msa0571080:CDS
TATTGGTGCAGATGTGACCA+AGG 0.724737 4_1:-73549528 Msa0571080:CDS
AAACAATGCTGCAATCAGTG+CGG 0.736809 4_1:-73557422 Msa0571080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATAAATAAAATAATA+TGG - chr4_1:73554383-73554402 Msa0571080:intron 0.0%
!!! CTTTAACATTTTATATTAAT+AGG + chr4_1:73549381-73549400 None:intergenic 10.0%
!! ATTTCTCTAATATAAAATAT+TGG - chr4_1:73549644-73549663 Msa0571080:CDS 10.0%
!!! AACATTTTATTTTTTTTTGA+AGG - chr4_1:73549668-73549687 Msa0571080:intron 10.0%
!!! ACATTTTATTTTTTTTTGAA+GGG - chr4_1:73549669-73549688 Msa0571080:intron 10.0%
!! TTCTTCTAATAAAATAATAT+TGG - chr4_1:73550173-73550192 Msa0571080:intron 10.0%
!! TCTTCTAATAAAATAATATT+GGG - chr4_1:73550174-73550193 Msa0571080:intron 10.0%
!! TTGAGTAAATAAATATTATT+GGG + chr4_1:73550382-73550401 None:intergenic 10.0%
!! TTTGAGTAAATAAATATTAT+TGG + chr4_1:73550383-73550402 None:intergenic 10.0%
!! TACATTAATAAAATATTAGT+GGG + chr4_1:73551825-73551844 None:intergenic 10.0%
!!! GAAATATTTTATTTTGTTTT+TGG + chr4_1:73554667-73554686 None:intergenic 10.0%
!!! TTTTCTTTGTTATTATAAAT+AGG - chr4_1:73554997-73555016 Msa0571080:intron 10.0%
!! AATTGCTTATTTATATAAAA+AGG - chr4_1:73555569-73555588 Msa0571080:intron 10.0%
!! ATAAATAAATTAACAAAGAA+AGG + chr4_1:73555996-73556015 None:intergenic 10.0%
!! AACAAAAATAATTATATGAT+GGG - chr4_1:73556256-73556275 Msa0571080:intron 10.0%
!!! ATTTTAATTTTTGTAGCATT+TGG - chr4_1:73547934-73547953 Msa0571080:three_prime_UTR 15.0%
!! GATTAACTAATATTTGTTTA+AGG + chr4_1:73548170-73548189 None:intergenic 15.0%
!! ATCATTACTCTTTATATTAT+AGG + chr4_1:73549468-73549487 None:intergenic 15.0%
!! CTAAAATTTCACTATATTTA+AGG - chr4_1:73549826-73549845 Msa0571080:intron 15.0%
!!! TTTAATTTTCATAAATTTGC+CGG + chr4_1:73550521-73550540 None:intergenic 15.0%
!!! TTTATGAAAATTAAAGTGTT+TGG - chr4_1:73550526-73550545 Msa0571080:intron 15.0%
!! ACAAAACATTCAAATAATAT+AGG - chr4_1:73550964-73550983 Msa0571080:intron 15.0%
!! GTACATTAATAAAATATTAG+TGG + chr4_1:73551826-73551845 None:intergenic 15.0%
!! AAAATAATATTAAGTGAGTA+GGG + chr4_1:73551916-73551935 None:intergenic 15.0%
!! AAAAATAATATTAAGTGAGT+AGG + chr4_1:73551917-73551936 None:intergenic 15.0%
!!! ATTATTTTTCACTATATAGT+TGG - chr4_1:73551928-73551947 Msa0571080:intron 15.0%
!!! TCTAAAACTTTTTAGTTTTT+AGG - chr4_1:73552026-73552045 Msa0571080:intron 15.0%
!!! CTAAAACTTTTTAGTTTTTA+GGG - chr4_1:73552027-73552046 Msa0571080:intron 15.0%
!!! TTTATTAATGCTTTGTATTT+TGG + chr4_1:73552328-73552347 None:intergenic 15.0%
!! AAAAAAAAGTTAAAACAGAA+AGG - chr4_1:73552348-73552367 Msa0571080:intron 15.0%
!! TTTCATTAACAAAATATTCA+TGG - chr4_1:73552995-73553014 Msa0571080:intron 15.0%
!! ATTAGATAATAAGGATATAA+TGG - chr4_1:73553794-73553813 Msa0571080:intron 15.0%
!! AGAAATTAATAGATGAAAAA+AGG + chr4_1:73554583-73554602 None:intergenic 15.0%
!!! ATATTTTATTTTGTTTTTGG+AGG + chr4_1:73554664-73554683 None:intergenic 15.0%
!! TATGAAAAATCTAATTGATA+TGG - chr4_1:73555792-73555811 Msa0571080:intron 15.0%
!!! TGTACTATAAAGTTTTTTAT+TGG + chr4_1:73555841-73555860 None:intergenic 15.0%
!! GAACAAAAATAATTATATGA+TGG - chr4_1:73556255-73556274 Msa0571080:intron 15.0%
!! TTATTAACAAATAACAATGT+TGG - chr4_1:73556469-73556488 Msa0571080:intron 15.0%
!!! TGGAACTTTATTTAAAATTA+TGG - chr4_1:73556642-73556661 Msa0571080:CDS 15.0%
!!! TACATTTTTTTTAAGTTCAA+GGG - chr4_1:73557689-73557708 Msa0571080:CDS 15.0%
!!! TAAAATCAATAGTTTTTTTG+GGG + chr4_1:73557728-73557747 None:intergenic 15.0%
!!! CTAAAATCAATAGTTTTTTT+GGG + chr4_1:73557729-73557748 None:intergenic 15.0%
!!! ACTAAAATCAATAGTTTTTT+TGG + chr4_1:73557730-73557749 None:intergenic 15.0%
!!! CATTTTTTTTAAATACAAAG+AGG - chr4_1:73557776-73557795 Msa0571080:intron 15.0%
!!! GTTTAAGATATATTAAAGAA+GGG + chr4_1:73557875-73557894 None:intergenic 15.0%
!! TGTTATGATGATATATATGT+AGG - chr4_1:73548917-73548936 Msa0571080:intron 20.0%
!! GATAGAAAGAAAAAAAACAA+AGG + chr4_1:73549437-73549456 None:intergenic 20.0%
!!! TATTTTTGACAGAAATATGT+TGG - chr4_1:73549703-73549722 Msa0571080:intron 20.0%
!!! CTTCATTTCTTTTTGAAAAA+TGG + chr4_1:73549933-73549952 None:intergenic 20.0%
!!! TAATGACTTTAATTTGAAGT+AGG - chr4_1:73549996-73550015 Msa0571080:intron 20.0%
!! TAAAAAAATAGGCTTATGAA+AGG - chr4_1:73550045-73550064 Msa0571080:CDS 20.0%
!!! AAAGTTTTTAAAACCCAAAA+AGG - chr4_1:73550443-73550462 Msa0571080:intron 20.0%
!!! AGTCATTTTTGAATTTGTAA+CGG - chr4_1:73550576-73550595 Msa0571080:intron 20.0%
!!! GTAGCGTAAAATAATTATTT+TGG + chr4_1:73550742-73550761 None:intergenic 20.0%
!! TATAGGAAATAATGTTCTTA+TGG - chr4_1:73550981-73551000 Msa0571080:intron 20.0%
!! AATAAAAAAGTAGTTCATGT+TGG - chr4_1:73551033-73551052 Msa0571080:intron 20.0%
!!! ACTATTTTCAAGAAAACTTT+AGG + chr4_1:73551650-73551669 None:intergenic 20.0%
!!! GGGAGTTTTTAAAATAATAT+TGG + chr4_1:73551805-73551824 None:intergenic 20.0%
!!! CATATAACTTTTAGCTATTA+AGG + chr4_1:73551883-73551902 None:intergenic 20.0%
!! TAAAAGTTATATGAGTATCA+CGG - chr4_1:73551890-73551909 Msa0571080:intron 20.0%
!! AAAATTGATACTGAAAACAT+AGG - chr4_1:73552096-73552115 Msa0571080:intron 20.0%
!! GATAGTATTAGATATAGATA+AGG - chr4_1:73552188-73552207 Msa0571080:intron 20.0%
!! TATTAGATATAGATAAGGAT+TGG - chr4_1:73552193-73552212 Msa0571080:intron 20.0%
!! TTTATCACATTGAAATATTC+GGG + chr4_1:73552410-73552429 None:intergenic 20.0%
!! CTTTATCACATTGAAATATT+CGG + chr4_1:73552411-73552430 None:intergenic 20.0%
!! ATTTATTCTGCAACAAAATT+TGG + chr4_1:73553162-73553181 None:intergenic 20.0%
!! TTTCGACAAATTACATTTAT+TGG + chr4_1:73553322-73553341 None:intergenic 20.0%
!! ATCAATATCAATATGTTGAA+TGG - chr4_1:73553868-73553887 Msa0571080:intron 20.0%
!! GAGATAAAAATGTCATAAAA+TGG - chr4_1:73554104-73554123 Msa0571080:intron 20.0%
!!! TCTAATTTTAAAGTCGAAAT+AGG - chr4_1:73554685-73554704 Msa0571080:intron 20.0%
!! TGTAAAACGACATATAATTT+AGG + chr4_1:73554952-73554971 None:intergenic 20.0%
!!! TTTGTTATTATAAATAGGAC+TGG - chr4_1:73555002-73555021 Msa0571080:intron 20.0%
!! ATCATGTGTTAAATGATTAT+AGG + chr4_1:73555196-73555215 None:intergenic 20.0%
!!! TTTTTGCTTATATTAGTAAC+CGG + chr4_1:73555237-73555256 None:intergenic 20.0%
!!! GTGATTTCATTTTTCATTTT+TGG - chr4_1:73555431-73555450 Msa0571080:intron 20.0%
!! GCTTATTTATATAAAAAGGT+TGG - chr4_1:73555573-73555592 Msa0571080:intron 20.0%
!!! TTTGCTCTATTATTTTGTTT+TGG - chr4_1:73555671-73555690 Msa0571080:intron 20.0%
!!! TTTGAGTTAATTTTGACTTA+TGG + chr4_1:73555744-73555763 None:intergenic 20.0%
!! TAAATAATGCTGGAATTATT+GGG - chr4_1:73556310-73556329 Msa0571080:intron 20.0%
!! GAGTATAATTTACATATACA+TGG - chr4_1:73556587-73556606 Msa0571080:CDS 20.0%
!! ATGTTGTAAAGAAACAAAAA+CGG - chr4_1:73556744-73556763 Msa0571080:intron 20.0%
!!! ATAATAATAATTAAGAGCAC+AGG + chr4_1:73556779-73556798 None:intergenic 20.0%
!!! CTTTACTATTTTTAAGATGT+GGG + chr4_1:73556910-73556929 None:intergenic 20.0%
!!! CAAAGTAATATTTTATTGGA+AGG - chr4_1:73557364-73557383 Msa0571080:intron 20.0%
!! AAGAAAACACATTTCATTTA+GGG - chr4_1:73557527-73557546 Msa0571080:intron 20.0%
!!! GTACATTTTTTTTAAGTTCA+AGG - chr4_1:73557688-73557707 Msa0571080:CDS 20.0%
!!! ACATTTTTTTTAAGTTCAAG+GGG - chr4_1:73557690-73557709 Msa0571080:CDS 20.0%
!!! AAAATCAATAGTTTTTTTGG+GGG + chr4_1:73557727-73557746 None:intergenic 20.0%
!!! CGTTTAAGATATATTAAAGA+AGG + chr4_1:73557876-73557895 None:intergenic 20.0%
!!! AGAATGTAAAGATAATGGAA+AGG + chr4_1:73547789-73547808 None:intergenic 25.0%
!!! TAATTGTTTGCTGTGTATTT+TGG - chr4_1:73548383-73548402 Msa0571080:CDS 25.0%
! ACATTATATATACTCCTTCT+GGG + chr4_1:73548523-73548542 None:intergenic 25.0%
! TACATTATATATACTCCTTC+TGG + chr4_1:73548524-73548543 None:intergenic 25.0%
! TAAGTCTTTATGAAACATTG+AGG - chr4_1:73548690-73548709 Msa0571080:intron 25.0%
! AAGTCTTTATGAAACATTGA+GGG - chr4_1:73548691-73548710 Msa0571080:intron 25.0%
! ATAGAATCTGAATTAACCAA+AGG - chr4_1:73548761-73548780 Msa0571080:CDS 25.0%
! TAGTTATAGCATGTATTACT+AGG + chr4_1:73548875-73548894 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + chr4_1:73549527-73549546 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr4_1:73549526-73549545 Msa0571080:CDS 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr4_1:73549539-73549558 Msa0571080:CDS 25.0%
! AAACCTACATAAAAATACGT+TGG - chr4_1:73549895-73549914 Msa0571080:intron 25.0%
!!! TTTCCAACGTATTTTTATGT+AGG + chr4_1:73549901-73549920 None:intergenic 25.0%
! ACACTTCATAACAAATAGAT+AGG + chr4_1:73550143-73550162 None:intergenic 25.0%
!! ACACCAACTAAATTTTATGA+AGG - chr4_1:73550264-73550283 Msa0571080:intron 25.0%
! ACACCTTCATAAAATTTAGT+TGG + chr4_1:73550270-73550289 None:intergenic 25.0%
! GCAAAGTTATAACTAAAAAG+TGG - chr4_1:73550296-73550315 Msa0571080:intron 25.0%
!! ATTCATAAGATCACCTTTTT+GGG + chr4_1:73550459-73550478 None:intergenic 25.0%
!! TATTCATAAGATCACCTTTT+TGG + chr4_1:73550460-73550479 None:intergenic 25.0%
! TGAATAAACTCTCAATATTC+AGG - chr4_1:73550474-73550493 Msa0571080:intron 25.0%
!! CTCAATATTCAGGTTTATAA+CGG - chr4_1:73550484-73550503 Msa0571080:intron 25.0%
! AGTAGTTGAAAAAAAACTTG+AGG - chr4_1:73550697-73550716 Msa0571080:intron 25.0%
! GTAGTTGAAAAAAAACTTGA+GGG - chr4_1:73550698-73550717 Msa0571080:intron 25.0%
! TAGTTGAAAAAAAACTTGAG+GGG - chr4_1:73550699-73550718 Msa0571080:intron 25.0%
!!! AAACATGCATAAGTATTGAT+TGG - chr4_1:73550799-73550818 Msa0571080:intron 25.0%
!!! AGGTTGATAATTACAAAGAT+GGG + chr4_1:73551404-73551423 None:intergenic 25.0%
!!! TAGGAAGTTTTGTAGAATTT+AGG + chr4_1:73551529-73551548 None:intergenic 25.0%
! TTTGTGTTTCAATGCAATTT+AGG + chr4_1:73551548-73551567 None:intergenic 25.0%
!!! ATATTTTGGAAAGGAGATAT+TGG - chr4_1:73551594-73551613 Msa0571080:intron 25.0%
! AGATATCCAATTAAGAAAGA+AGG + chr4_1:73551693-73551712 None:intergenic 25.0%
!!! TAACTTTTAGCTATTAAGGA+TGG + chr4_1:73551879-73551898 None:intergenic 25.0%
!! AAATGGATAGACTTTTATGA+AGG + chr4_1:73552219-73552238 None:intergenic 25.0%
!!! AACTGTCTTTTTCATTCAAA+TGG + chr4_1:73552236-73552255 None:intergenic 25.0%
!! GATGTCTAAGACTAAAATTT+GGG + chr4_1:73552294-73552313 None:intergenic 25.0%
!!! TTGTATTTTGGTGTTATCTT+AGG + chr4_1:73552316-73552335 None:intergenic 25.0%
!!! AATATAAAATTGGTGGTGAT+TGG + chr4_1:73552517-73552536 None:intergenic 25.0%
! TTGAAGCAATATAAAATTGG+TGG + chr4_1:73552524-73552543 None:intergenic 25.0%
!!! CCTTTGAAGCAATATAAAAT+TGG + chr4_1:73552527-73552546 None:intergenic 25.0%
!! CCAATTTTATATTGCTTCAA+AGG - chr4_1:73552524-73552543 Msa0571080:intron 25.0%
!! ACTACACAAATAATTTTGAG+CGG + chr4_1:73552553-73552572 None:intergenic 25.0%
! TGATTGTTATAACCATTTGT+TGG - chr4_1:73552725-73552744 Msa0571080:intron 25.0%
!! AGAATACTTTGAAGAAGAAT+TGG - chr4_1:73553039-73553058 Msa0571080:intron 25.0%
!! GAATACTTTGAAGAAGAATT+GGG - chr4_1:73553040-73553059 Msa0571080:intron 25.0%
! ATAGAAAGAGAGAATAAAGA+CGG + chr4_1:73553074-73553093 None:intergenic 25.0%
! ATTGGATTTATGAATAGTCA+AGG + chr4_1:73553304-73553323 None:intergenic 25.0%
! ATGGGAAATCTACATTTAAT+TGG - chr4_1:73553629-73553648 Msa0571080:intron 25.0%
! TAGCTTAGGATTAGATAATA+AGG - chr4_1:73553785-73553804 Msa0571080:intron 25.0%
! GATATTTGAACATGCTAAAA+AGG + chr4_1:73554327-73554346 None:intergenic 25.0%
! TAAAATAATATGGATCAGAC+CGG - chr4_1:73554393-73554412 Msa0571080:intron 25.0%
!!! TTTGTTTTTGGAGGTTTTTA+TGG + chr4_1:73554655-73554674 None:intergenic 25.0%
! TTGTAGTTATTAGTTACAAG+GGG + chr4_1:73554844-73554863 None:intergenic 25.0%
! GTTGTAGTTATTAGTTACAA+GGG + chr4_1:73554845-73554864 None:intergenic 25.0%
! TGTTGTAGTTATTAGTTACA+AGG + chr4_1:73554846-73554865 None:intergenic 25.0%
! TTATTATAAATAGGACTGGA+GGG - chr4_1:73555006-73555025 Msa0571080:intron 25.0%
! AAAATGAAACTCCCAAAAAT+TGG - chr4_1:73555039-73555058 Msa0571080:intron 25.0%
! TATATATTGTATACACCATC+CGG - chr4_1:73555215-73555234 Msa0571080:intron 25.0%
! ACTTCTAATTTAGTCTAACT+TGG - chr4_1:73555402-73555421 Msa0571080:intron 25.0%
! CTTCTAATTTAGTCTAACTT+GGG - chr4_1:73555403-73555422 Msa0571080:intron 25.0%
!! CAAATAACACTCATTGTTTT+GGG + chr4_1:73555472-73555491 None:intergenic 25.0%
! AGCAATTTGAAGAAAATGTA+AGG + chr4_1:73555556-73555575 None:intergenic 25.0%
! TGATACTCATGAAAAAAATG+TGG - chr4_1:73555705-73555724 Msa0571080:intron 25.0%
!!! AGAAAGGTTTTATTAGCAAA+TGG + chr4_1:73555980-73555999 None:intergenic 25.0%
! GTAAATAATGCTGGAATTAT+TGG - chr4_1:73556309-73556328 Msa0571080:intron 25.0%
! AAATAATGCTGGAATTATTG+GGG - chr4_1:73556311-73556330 Msa0571080:intron 25.0%
! GTCTAAATACACACAAATTA+TGG - chr4_1:73556365-73556384 Msa0571080:intron 25.0%
! ACCTATTCTTGCAAATATTA+TGG - chr4_1:73556715-73556734 Msa0571080:CDS 25.0%
! CCTATTCTTGCAAATATTAT+GGG - chr4_1:73556716-73556735 Msa0571080:CDS 25.0%
! CAAAAGTGGTTTCATATTAA+AGG - chr4_1:73556813-73556832 Msa0571080:intron 25.0%
!! TTTATGTGTGTATTTTTCTC+AGG - chr4_1:73556841-73556860 Msa0571080:intron 25.0%
!!! CCTTTACTATTTTTAAGATG+TGG + chr4_1:73556911-73556930 None:intergenic 25.0%
! CCACATCTTAAAAATAGTAA+AGG - chr4_1:73556908-73556927 Msa0571080:CDS 25.0%
! ATCTTAAAAATAGTAAAGGC+AGG - chr4_1:73556912-73556931 Msa0571080:CDS 25.0%
! AATCTATATATGTGATGTTG+TGG + chr4_1:73557046-73557065 None:intergenic 25.0%
! ATACACACATATATAGATGA+TGG - chr4_1:73557074-73557093 Msa0571080:intron 25.0%
!!! GATTTGTTGAATGATATATC+AGG - chr4_1:73557109-73557128 Msa0571080:intron 25.0%
!! GGGTCAAAGTAATATTTTAT+TGG - chr4_1:73557360-73557379 Msa0571080:intron 25.0%
!! AAATGAAATGTGTTTTCTTG+TGG + chr4_1:73557526-73557545 None:intergenic 25.0%
! CAAGAAAACACATTTCATTT+AGG - chr4_1:73557526-73557545 Msa0571080:intron 25.0%
!! AAAGGTACATGCTAATTAAA+CGG + chr4_1:73557596-73557615 None:intergenic 25.0%
AAGAATTTGAAGGTCCAATA+TGG + chr4_1:73547766-73547785 None:intergenic 30.0%
AATGGAAAGGAAGAATTTGA+AGG + chr4_1:73547776-73547795 None:intergenic 30.0%
AGGGAAGAATGTAAAGATAA+TGG + chr4_1:73547794-73547813 None:intergenic 30.0%
!! TTTCCAAAGTTGATGATTGT+AGG - chr4_1:73548083-73548102 Msa0571080:three_prime_UTR 30.0%
AGTTACATCTTCAAACATCA+TGG + chr4_1:73548276-73548295 None:intergenic 30.0%
ATGTAACTGATATCACCAAT+TGG - chr4_1:73548288-73548307 Msa0571080:CDS 30.0%
!! TAGCTTTAAATTACCATGAG+AGG + chr4_1:73548317-73548336 None:intergenic 30.0%
ATTCCCAATTCAACTCAATA+AGG + chr4_1:73548359-73548378 None:intergenic 30.0%
!! TATTGAGTTGAATTGGGAAT+TGG - chr4_1:73548359-73548378 Msa0571080:CDS 30.0%
! TCCTTTCATCAATTGATTCT+TGG - chr4_1:73548488-73548507 Msa0571080:CDS 30.0%
TCCAAGAATCAATTGATGAA+AGG + chr4_1:73548492-73548511 None:intergenic 30.0%
AATTCAGATTCTATGTAACC+TGG + chr4_1:73548755-73548774 None:intergenic 30.0%
TTGTTACATCTCTCATATCT+TGG + chr4_1:73548826-73548845 None:intergenic 30.0%
TGTGCAAAATCAATAGTGAA+TGG - chr4_1:73548978-73548997 Msa0571080:intron 30.0%
AATAGTGAATGGTACATTGA+GGG - chr4_1:73548989-73549008 Msa0571080:intron 30.0%
! AAAAAGATTTTGGATGCTAC+TGG - chr4_1:73549152-73549171 Msa0571080:intron 30.0%
TGAATGAGTGATTGTCAAAT+GGG - chr4_1:73549226-73549245 Msa0571080:intron 30.0%
! AGATAGTTTTCTTGTATGTC+AGG - chr4_1:73549279-73549298 Msa0571080:intron 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr4_1:73549552-73549571 Msa0571080:CDS 30.0%
! TTTGAAGTAGGTCTGTAAAT+AGG - chr4_1:73550008-73550027 Msa0571080:intron 30.0%
!!! GTTGAAGTTTTTTCATAGGT+AGG - chr4_1:73550086-73550105 Msa0571080:intron 30.0%
CTAAAAGACACCTTCATAAA+AGG + chr4_1:73550215-73550234 None:intergenic 30.0%
TATAACGGCAAAAATAAAGC+CGG - chr4_1:73550499-73550518 Msa0571080:intron 30.0%
AGTTGAAAAAAAACTTGAGG+GGG - chr4_1:73550700-73550719 Msa0571080:intron 30.0%
ATTCTTATGACTGATGAGAA+TGG + chr4_1:73551114-73551133 None:intergenic 30.0%
!! GAGGTTGATAATTACAAAGA+TGG + chr4_1:73551405-73551424 None:intergenic 30.0%
CCTTTCCAAAATATGTGAAT+AGG + chr4_1:73551588-73551607 None:intergenic 30.0%
!! CCTATTCACATATTTTGGAA+AGG - chr4_1:73551585-73551604 Msa0571080:intron 30.0%
TCAAGAAAACTTTAGGTATC+AGG + chr4_1:73551643-73551662 None:intergenic 30.0%
ACATGTCCTTCTTTCTTAAT+TGG - chr4_1:73551684-73551703 Msa0571080:intron 30.0%
ATTAACCCCATCACTAAATT+TGG - chr4_1:73551961-73551980 Msa0571080:intron 30.0%
ATGTTCCAAATTTAGTGATG+GGG + chr4_1:73551969-73551988 None:intergenic 30.0%
CATGTTCCAAATTTAGTGAT+GGG + chr4_1:73551970-73551989 None:intergenic 30.0%
TCATGTTCCAAATTTAGTGA+TGG + chr4_1:73551971-73551990 None:intergenic 30.0%
TCGTAGAGATATTATACCAA+AGG - chr4_1:73552127-73552146 Msa0571080:intron 30.0%
ACCAAAGGTTCGAAAAATAA+CGG - chr4_1:73552142-73552161 Msa0571080:intron 30.0%
! GGATGTCTAAGACTAAAATT+TGG + chr4_1:73552295-73552314 None:intergenic 30.0%
ATTGTCTTATGGTAAGTTCA+TGG + chr4_1:73552637-73552656 None:intergenic 30.0%
! TTGTTATAACCATTTGTTGG+AGG - chr4_1:73552728-73552747 Msa0571080:intron 30.0%
AAAAACATTCCTCCAACAAA+TGG + chr4_1:73552740-73552759 None:intergenic 30.0%
TGTGTGGAGTTTAGAAAAAA+TGG + chr4_1:73553261-73553280 None:intergenic 30.0%
! TTTTCTAAACTCCACACAAT+AGG - chr4_1:73553263-73553282 Msa0571080:intron 30.0%
! TTACTGATTGAACGTGTTAT+TGG + chr4_1:73553514-73553533 None:intergenic 30.0%
AAACATTCAATGCATGTGAT+AGG - chr4_1:73553554-73553573 Msa0571080:intron 30.0%
TCTACATTTAATTGGCATCA+AGG - chr4_1:73553637-73553656 Msa0571080:intron 30.0%
ATTCCTCTTACTGTATGATA+AGG + chr4_1:73553674-73553693 None:intergenic 30.0%
TATCATACAGTAAGAGGAAT+TGG - chr4_1:73553674-73553693 Msa0571080:intron 30.0%
AGTTGTTTACATTGTAGCTT+AGG - chr4_1:73553771-73553790 Msa0571080:intron 30.0%
ATAAGGATATAATGGCAACT+AGG - chr4_1:73553802-73553821 Msa0571080:intron 30.0%
AAAATAATATGGATCAGACC+GGG - chr4_1:73554394-73554413 Msa0571080:intron 30.0%
TATGGAATGTTTACGTTGTT+TGG + chr4_1:73554637-73554656 None:intergenic 30.0%
! TCTAAAGCGACATACAATTT+AGG + chr4_1:73554918-73554937 None:intergenic 30.0%
GTTATTATAAATAGGACTGG+AGG - chr4_1:73555005-73555024 Msa0571080:intron 30.0%
CTTGTATCACCATAAATTCA+AGG - chr4_1:73555122-73555141 Msa0571080:intron 30.0%
! ATCAATGCATATGCTATTTG+TGG - chr4_1:73555159-73555178 Msa0571080:intron 30.0%
! TGCTATTTGTGGAAATTTCA+AGG - chr4_1:73555170-73555189 Msa0571080:intron 30.0%
TTGCTTATATTAGTGACTGA+AGG - chr4_1:73555349-73555368 Msa0571080:intron 30.0%
TGCTTATATTAGTGACTGAA+GGG - chr4_1:73555350-73555369 Msa0571080:intron 30.0%
! GCAAATAACACTCATTGTTT+TGG + chr4_1:73555473-73555492 None:intergenic 30.0%
AGAAAAGTTGTACTAATCAC+TGG - chr4_1:73555616-73555635 Msa0571080:intron 30.0%
! GTCACTTGTTGACATTAAAA+TGG - chr4_1:73556063-73556082 Msa0571080:intron 30.0%
ACCAATAATGATAACATCAG+GGG + chr4_1:73556131-73556150 None:intergenic 30.0%
CACCAATAATGATAACATCA+GGG + chr4_1:73556132-73556151 None:intergenic 30.0%
!! TTACCTCTGAAATTGTAAGA+TGG - chr4_1:73556622-73556641 Msa0571080:CDS 30.0%
CCCATAATATTTGCAAGAAT+AGG + chr4_1:73556719-73556738 None:intergenic 30.0%
AATGATATATCAGGCTAGTA+AGG - chr4_1:73557118-73557137 Msa0571080:intron 30.0%
! GAGACTTTAAGAATTGAACT+TGG - chr4_1:73557161-73557180 Msa0571080:CDS 30.0%
! CTTTAAGAATTGAACTTGGT+TGG - chr4_1:73557165-73557184 Msa0571080:CDS 30.0%
ATATTACTTTGACCCATGAA+GGG + chr4_1:73557355-73557374 None:intergenic 30.0%
AATATTACTTTGACCCATGA+AGG + chr4_1:73557356-73557375 None:intergenic 30.0%
TAAGCAGATTATCATTCTTC+CGG + chr4_1:73557454-73557473 None:intergenic 30.0%
TTTATTCTACCTTAAGCTCT+TGG + chr4_1:73557490-73557509 None:intergenic 30.0%
CAATAAGACAGTGTGATAAA+AGG + chr4_1:73557614-73557633 None:intergenic 30.0%
TTAGTGACGTATAATCTTTG+TGG - chr4_1:73557745-73557764 Msa0571080:intron 30.0%
!!! AAAAGAATGGAGGTATTTTG+TGG + chr4_1:73557839-73557858 None:intergenic 30.0%
AGTGTGAGATTGAAAAAGAA+TGG + chr4_1:73557852-73557871 None:intergenic 30.0%
GGTTCAGGAACTTATGAATA+AGG + chr4_1:73547696-73547715 None:intergenic 35.0%
! TCCTTTTCTTACCACCATAT+TGG - chr4_1:73547749-73547768 Msa0571080:three_prime_UTR 35.0%
TCCAATATGGTGGTAAGAAA+AGG + chr4_1:73547753-73547772 None:intergenic 35.0%
AATTTGAAGGTCCAATATGG+TGG + chr4_1:73547763-73547782 None:intergenic 35.0%
! CTTTACCAGCAACATTTTCA+GGG + chr4_1:73547813-73547832 None:intergenic 35.0%
! ACTTTACCAGCAACATTTTC+AGG + chr4_1:73547814-73547833 None:intergenic 35.0%
GCACGCATTATAATAACATC+AGG + chr4_1:73548058-73548077 None:intergenic 35.0%
! GATGAAACCGTTAACCATTT+TGG - chr4_1:73548115-73548134 Msa0571080:three_prime_UTR 35.0%
ACGTCTACCAAAATGGTTAA+CGG + chr4_1:73548125-73548144 None:intergenic 35.0%
CATACATACGTCTACCAAAA+TGG + chr4_1:73548132-73548151 None:intergenic 35.0%
TTCTCTGTAATGCATTACAG+TGG - chr4_1:73548217-73548236 Msa0571080:CDS 35.0%
ATGCATTACAGTGGATCATT+TGG - chr4_1:73548226-73548245 Msa0571080:CDS 35.0%
GCTAACTACATGACTTTATC+TGG - chr4_1:73548333-73548352 Msa0571080:CDS 35.0%
!! TGGCCTTATTGAGTTGAATT+GGG - chr4_1:73548353-73548372 Msa0571080:CDS 35.0%
!!! TGTTTGCTGTGTATTTTGGT+AGG - chr4_1:73548387-73548406 Msa0571080:CDS 35.0%
! TTTGGTAGGACACAAACTTT+TGG - chr4_1:73548401-73548420 Msa0571080:CDS 35.0%
! TTGGTAGGACACAAACTTTT+GGG - chr4_1:73548402-73548421 Msa0571080:CDS 35.0%
CAATAGTGAATGGTACATTG+AGG - chr4_1:73548988-73549007 Msa0571080:intron 35.0%
ATAGTGAATGGTACATTGAG+GGG - chr4_1:73548990-73549009 Msa0571080:intron 35.0%
TATGTCATTCTAAACCATGC+TGG + chr4_1:73549035-73549054 None:intergenic 35.0%
! AGCACCTAGCAAAAAGATTT+TGG - chr4_1:73549142-73549161 Msa0571080:intron 35.0%
! GCATCCAAAATCTTTTTGCT+AGG + chr4_1:73549149-73549168 None:intergenic 35.0%
CTGAATGAGTGATTGTCAAA+TGG - chr4_1:73549225-73549244 Msa0571080:intron 35.0%
ATGTTAAAGACAGCAATGTC+AGG - chr4_1:73549392-73549411 Msa0571080:intron 35.0%
GAGAGAAAGTTGTCAAAAAG+TGG - chr4_1:73549608-73549627 Msa0571080:CDS 35.0%
TTAAAGCCTATTTCACCGTA+AGG + chr4_1:73549871-73549890 None:intergenic 35.0%
! AGGTCTGTAAATAGGTTTTC+AGG - chr4_1:73550016-73550035 Msa0571080:intron 35.0%
!!! TGTAAATAGGTTTTCAGGTC+AGG - chr4_1:73550021-73550040 Msa0571080:intron 35.0%
TCAGGTCAGGCTAAAAAAAT+AGG - chr4_1:73550034-73550053 Msa0571080:CDS 35.0%
AAAAACTTCAACCTCGAATC+TGG + chr4_1:73550078-73550097 None:intergenic 35.0%
!!! CGAGGTTGAAGTTTTTTCAT+AGG - chr4_1:73550082-73550101 Msa0571080:CDS 35.0%
TCATAACAAATAGATAGGCC+AGG + chr4_1:73550138-73550157 None:intergenic 35.0%
! CTAGAAGACACCTTTTATGA+AGG - chr4_1:73550202-73550221 Msa0571080:intron 35.0%
TTGCTAAAAGACACCTTCAT+GGG - chr4_1:73550341-73550360 Msa0571080:intron 35.0%
TTCAATAATTATGACCCGTG+CGG + chr4_1:73550943-73550962 None:intergenic 35.0%
! TCTAGAGTTACATCAAGAAG+TGG + chr4_1:73551144-73551163 None:intergenic 35.0%
AAGTTGACCGTGAGAAAATA+CGG - chr4_1:73551176-73551195 Msa0571080:intron 35.0%
ATGACAATCAACAAGAGTCA+AGG + chr4_1:73551240-73551259 None:intergenic 35.0%
ATAAATGAATCTGCCTACGT+TGG - chr4_1:73551274-73551293 Msa0571080:intron 35.0%
TGCCTACGTTGGAATTTAAA+CGG - chr4_1:73551285-73551304 Msa0571080:intron 35.0%
TTCCGTTTAAATTCCAACGT+AGG + chr4_1:73551290-73551309 None:intergenic 35.0%
ATTGGCGATACTATATACCT+AGG + chr4_1:73551341-73551360 None:intergenic 35.0%
GTGATAACATGTAGCAACAT+TGG + chr4_1:73551359-73551378 None:intergenic 35.0%
ATGGGTAGATACATTCTTGA+AGG + chr4_1:73551386-73551405 None:intergenic 35.0%
! ACACGCCTATTCACATATTT+TGG - chr4_1:73551580-73551599 Msa0571080:intron 35.0%
GATGGAAAGGTGATAAAGTT+TGG + chr4_1:73552464-73552483 None:intergenic 35.0%
TTTCAGCTGATTGATTGTAC+TGG + chr4_1:73552587-73552606 None:intergenic 35.0%
ATCTTGCAGACATTGTCTTA+TGG + chr4_1:73552648-73552667 None:intergenic 35.0%
!! TTTAAAGCACCGAACCATAA+CGG - chr4_1:73552757-73552776 Msa0571080:intron 35.0%
! ATTTCTTTGAGAGACCGTTA+TGG + chr4_1:73552774-73552793 None:intergenic 35.0%
AACGGTCTCTCAAAGAAATA+AGG - chr4_1:73552775-73552794 Msa0571080:intron 35.0%
ACGGTCTCTCAAAGAAATAA+GGG - chr4_1:73552776-73552795 Msa0571080:intron 35.0%
CTTACGTGTTGTAGTGAAAT+TGG - chr4_1:73552864-73552883 Msa0571080:intron 35.0%
! TCCTTTTATTCCACCAAAAG+CGG + chr4_1:73552898-73552917 None:intergenic 35.0%
! CTTTTGGTGGAATAAAAGGA+TGG - chr4_1:73552898-73552917 Msa0571080:intron 35.0%
TTCATGGATGTCATCTGATA+AGG - chr4_1:73553011-73553030 Msa0571080:intron 35.0%
GTGGAGTTTAGAAAAAATGG+TGG + chr4_1:73553258-73553277 None:intergenic 35.0%
AAGAGAATGAGTGTCTCAAA+TGG - chr4_1:73553343-73553362 Msa0571080:intron 35.0%
CACTTCCAATTCATTCCATT+CGG + chr4_1:73553455-73553474 None:intergenic 35.0%
! ATGGAATGAATTGGAAGTGT+AGG - chr4_1:73553456-73553475 Msa0571080:intron 35.0%
! TGGAATGAATTGGAAGTGTA+GGG - chr4_1:73553457-73553476 Msa0571080:intron 35.0%
TCAATCAGTAACTGTTGCAT+TGG - chr4_1:73553523-73553542 Msa0571080:intron 35.0%
AATGTAGATTTCCCATTACG+AGG + chr4_1:73553625-73553644 None:intergenic 35.0%
CATTTAATTGGCATCAAGGA+TGG - chr4_1:73553641-73553660 Msa0571080:intron 35.0%
!!! TTGATTGGTTTTGTTTGGCA+TGG + chr4_1:73553838-73553857 None:intergenic 35.0%
TGCCAAACAAAACCAATCAA+AGG - chr4_1:73553838-73553857 Msa0571080:intron 35.0%
!!! CTCCTTTGATTGGTTTTGTT+TGG + chr4_1:73553843-73553862 None:intergenic 35.0%
TTGATATCGTCTCCTTTGAT+TGG + chr4_1:73553853-73553872 None:intergenic 35.0%
! GCAATTTTCTTTCTTTGCCT+TGG - chr4_1:73554247-73554266 Msa0571080:intron 35.0%
TCTGGTATGGCTACATAAAT+GGG + chr4_1:73554496-73554515 None:intergenic 35.0%
ATCTGGTATGGCTACATAAA+TGG + chr4_1:73554497-73554516 None:intergenic 35.0%
TTTATGTAGCCATACCAGAT+CGG - chr4_1:73554497-73554516 Msa0571080:intron 35.0%
TCAATTCAATGCAAGTAGAG+AGG + chr4_1:73554747-73554766 None:intergenic 35.0%
TCTCTACTTGCATTGAATTG+AGG - chr4_1:73554746-73554765 Msa0571080:intron 35.0%
AAGCGACATACAATTTAGGA+CGG + chr4_1:73554914-73554933 None:intergenic 35.0%
! TACGAGACACACCAATTTTT+GGG + chr4_1:73555053-73555072 None:intergenic 35.0%
! ATACGAGACACACCAATTTT+TGG + chr4_1:73555054-73555073 None:intergenic 35.0%
AGTTGGATGGTAGATAGATA+TGG + chr4_1:73555077-73555096 None:intergenic 35.0%
! CAATTTTATCGACCACTAGT+TGG + chr4_1:73555094-73555113 None:intergenic 35.0%
CAACTAGTGGTCGATAAAAT+TGG - chr4_1:73555092-73555111 Msa0571080:intron 35.0%
TGGTATAGGCCTTGAATTTA+TGG + chr4_1:73555134-73555153 None:intergenic 35.0%
!! TGCATTGATGATGATGGTAT+AGG + chr4_1:73555148-73555167 None:intergenic 35.0%
!! AGCATATGCATTGATGATGA+TGG + chr4_1:73555154-73555173 None:intergenic 35.0%
TGCTTATATTAGTAACCGGA+TGG + chr4_1:73555233-73555252 None:intergenic 35.0%
TGTAAGGTAGCATGATGATA+GGG + chr4_1:73555540-73555559 None:intergenic 35.0%
ATGTAAGGTAGCATGATGAT+AGG + chr4_1:73555541-73555560 None:intergenic 35.0%
TAGCAAATGGCAATATTGAG+TGG + chr4_1:73555967-73555986 None:intergenic 35.0%
TCCCCTGATGTTATCATTAT+TGG - chr4_1:73556127-73556146 Msa0571080:intron 35.0%
GCACCAATAATGATAACATC+AGG + chr4_1:73556133-73556152 None:intergenic 35.0%
!! GTACTTTTTGTTTCATGCAG+TGG - chr4_1:73556278-73556297 Msa0571080:intron 35.0%
GATCATCTGGTAAATAATGC+TGG - chr4_1:73556300-73556319 Msa0571080:intron 35.0%
!!! AAGGTTGGTAGAGGATTTTT+CGG - chr4_1:73556338-73556357 Msa0571080:intron 35.0%
GTTCCATCTTACAATTTCAG+AGG + chr4_1:73556628-73556647 None:intergenic 35.0%
TTTCTCAGGAAACAAACTTC+TGG - chr4_1:73556855-73556874 Msa0571080:intron 35.0%
TTCTCAGGAAACAAACTTCT+GGG - chr4_1:73556856-73556875 Msa0571080:CDS 35.0%
ACGTTATAGATACTGAGTCT+CGG + chr4_1:73556977-73556996 None:intergenic 35.0%
!! ATTGAACTTGGTTGGTCTAT+TGG - chr4_1:73557173-73557192 Msa0571080:CDS 35.0%
!!! TGTTTTGATAAAACCAGGTG+TGG + chr4_1:73557210-73557229 None:intergenic 35.0%
!!! AGGTCTGTTTTGATAAAACC+AGG + chr4_1:73557215-73557234 None:intergenic 35.0%
!!! TGGTTTTATCAAAACAGACC+TGG - chr4_1:73557214-73557233 Msa0571080:CDS 35.0%
GATTATCATTCTTCCGGTAA+GGG + chr4_1:73557448-73557467 None:intergenic 35.0%
AGATTATCATTCTTCCGGTA+AGG + chr4_1:73557449-73557468 None:intergenic 35.0%
TCCAAATTAGAACCGTTTGT+TGG + chr4_1:73557559-73557578 None:intergenic 35.0%
! TATTTTGTGGTGAAAAGAGG+AGG + chr4_1:73557826-73557845 None:intergenic 35.0%
! AGGTATTTTGTGGTGAAAAG+AGG + chr4_1:73557829-73557848 None:intergenic 35.0%
GTGAGATTGAAAAAGAATGG+AGG + chr4_1:73557849-73557868 None:intergenic 35.0%
ATAGTAGTACCTCATTTGCA+AGG - chr4_1:73557964-73557983 Msa0571080:CDS 35.0%
AGTGAGGAAAAGAAGGTGAA+TGG + chr4_1:73547730-73547749 None:intergenic 40.0%
GAAAAGGAGTGAGGAAAAGA+AGG + chr4_1:73547737-73547756 None:intergenic 40.0%
TTCTTCCCTGAAAATGTTGC+TGG - chr4_1:73547805-73547824 Msa0571080:three_prime_UTR 40.0%
GGTAAAGTTGTTCACATCAC+CGG - chr4_1:73547826-73547845 Msa0571080:three_prime_UTR 40.0%
! TTTTACCTCTCCAATACCAG+AGG + chr4_1:73547857-73547876 None:intergenic 40.0%
ACGCCTACAATCATCAACTT+TGG + chr4_1:73548089-73548108 None:intergenic 40.0%
!! AGTTGATGATTGTAGGCGTT+TGG - chr4_1:73548090-73548109 Msa0571080:three_prime_UTR 40.0%
AAACAATGCTGCAATCAGTG+CGG - chr4_1:73548250-73548269 Msa0571080:CDS 40.0%
!! CTGGCCTTATTGAGTTGAAT+TGG - chr4_1:73548352-73548371 Msa0571080:CDS 40.0%
! TGGTAGGACACAAACTTTTG+GGG - chr4_1:73548403-73548422 Msa0571080:CDS 40.0%
TGAGGTGTGGTAAAGCAAAA+CGG + chr4_1:73548444-73548463 None:intergenic 40.0%
AAACAGCAGAGGCAAAATTG+TGG - chr4_1:73548465-73548484 Msa0571080:CDS 40.0%
GAAACATTGAGGGTTGAAGT+TGG - chr4_1:73548701-73548720 Msa0571080:CDS 40.0%
GGTGTAACAATTGTTACACC+AGG - chr4_1:73548734-73548753 Msa0571080:CDS 40.0%
TGGCAATAAGACTTTGCCTT+TGG + chr4_1:73548780-73548799 None:intergenic 40.0%
!! AAAGTCTTATTGCCACCAGA+AGG - chr4_1:73548785-73548804 Msa0571080:CDS 40.0%
AGTGTTGTGTCCAGAATTGT+TGG - chr4_1:73549064-73549083 Msa0571080:intron 40.0%
TCAGGAGATCGAATTGAAGA+TGG + chr4_1:73549197-73549216 None:intergenic 40.0%
ATCTTCAATTCGATCTCCTG+AGG - chr4_1:73549196-73549215 Msa0571080:intron 40.0%
!!! TGTCAAATGGGAGTGTCTTT+TGG - chr4_1:73549238-73549257 Msa0571080:intron 40.0%
!!! GTCAAATGGGAGTGTCTTTT+GGG - chr4_1:73549239-73549258 Msa0571080:intron 40.0%
!!! TCAAATGGGAGTGTCTTTTG+GGG - chr4_1:73549240-73549259 Msa0571080:intron 40.0%
! AGCTTGATAGTCAAGCCTTA+CGG - chr4_1:73549853-73549872 Msa0571080:intron 40.0%
AAAGTGGAAATCACACCTTG+AGG - chr4_1:73550312-73550331 Msa0571080:intron 40.0%
! TTTTAGCAAGTCACACCTCA+AGG + chr4_1:73550330-73550349 None:intergenic 40.0%
CTTGCTAAAAGACACCTTCA+TGG - chr4_1:73550340-73550359 Msa0571080:intron 40.0%
! TGATGAGAATGGTGTTAGCA+TGG + chr4_1:73551103-73551122 None:intergenic 40.0%
AGTTGACCGTGAGAAAATAC+GGG - chr4_1:73551177-73551196 Msa0571080:intron 40.0%
AATCAACAAGAGTCAAGGAC+AGG + chr4_1:73551235-73551254 None:intergenic 40.0%
AACGGAATCCTTGTATCTGA+TGG - chr4_1:73551303-73551322 Msa0571080:intron 40.0%
CACTTACACCATCAGATACA+AGG + chr4_1:73551314-73551333 None:intergenic 40.0%
! AACCTAATGGACCAATCTGT+CGG + chr4_1:73551443-73551462 None:intergenic 40.0%
ATGAGTAAGCGTGAACCTAA+TGG + chr4_1:73551456-73551475 None:intergenic 40.0%
!! AGTTTTGACGTGCAAGTAAG+TGG + chr4_1:73551505-73551524 None:intergenic 40.0%
!!! GCCGTTATTTTTCGAACCTT+TGG + chr4_1:73552146-73552165 None:intergenic 40.0%
ACTTCATTGTTTCCATGCGA+CGG - chr4_1:73552434-73552453 Msa0571080:intron 40.0%
TTGATTGTACTGGACATGCT+TGG + chr4_1:73552577-73552596 None:intergenic 40.0%
TTTGAGAGACCGTTATGGTT+CGG + chr4_1:73552769-73552788 None:intergenic 40.0%
!! TCCGCTTTTGGTGGAATAAA+AGG - chr4_1:73552894-73552913 Msa0571080:intron 40.0%
TTGGTGGAATAAAAGGATGG+TGG - chr4_1:73552901-73552920 Msa0571080:intron 40.0%
TGGTGGAATAAAAGGATGGT+GGG - chr4_1:73552902-73552921 Msa0571080:intron 40.0%
TCCTTCGCTGTACTATTTGT+CGG - chr4_1:73552959-73552978 Msa0571080:intron 40.0%
GAAAGAGAGAATAAAGACGG+TGG + chr4_1:73553071-73553090 None:intergenic 40.0%
! TCATCAGTTTGTGTTGGTGT+CGG - chr4_1:73553124-73553143 Msa0571080:intron 40.0%
TAGTCAAGGAACAACTCAAG+CGG + chr4_1:73553290-73553309 None:intergenic 40.0%
ACATGTTCACTTCACTGTTG+TGG + chr4_1:73553384-73553403 None:intergenic 40.0%
TCACAGTGGCATGATATTGT+TGG + chr4_1:73553425-73553444 None:intergenic 40.0%
CCTAATCTTTGCTAATGAGC+GGG + chr4_1:73553743-73553762 None:intergenic 40.0%
CCCTAATCTTTGCTAATGAG+CGG + chr4_1:73553744-73553763 None:intergenic 40.0%
CCGCTCATTAGCAAAGATTA+GGG - chr4_1:73553741-73553760 Msa0571080:intron 40.0%
! ACATCGATGTCTAGCGTTTT+AGG - chr4_1:73553915-73553934 Msa0571080:intron 40.0%
TTATGTAGCCATACCAGATC+GGG - chr4_1:73554498-73554517 Msa0571080:intron 40.0%
!!! CTCACGCGCTTTATTTTGTT+TGG - chr4_1:73554601-73554620 Msa0571080:intron 40.0%
TCTATCTACCATCCAACTAG+TGG - chr4_1:73555079-73555098 Msa0571080:intron 40.0%
TTTATCGACCACTAGTTGGA+TGG + chr4_1:73555090-73555109 None:intergenic 40.0%
GTTGGTGCGAACAGAAAATA+TGG - chr4_1:73555591-73555610 Msa0571080:intron 40.0%
AATGGAGAATCTAGTAGCAG+TGG - chr4_1:73556081-73556100 Msa0571080:intron 40.0%
AATTATTGGGGTTCCAAGGT+TGG - chr4_1:73556323-73556342 Msa0571080:intron 40.0%
GAAAAATCCTCTACCAACCT+TGG + chr4_1:73556339-73556358 None:intergenic 40.0%
TCTCAGGAAACAAACTTCTG+GGG - chr4_1:73556857-73556876 Msa0571080:CDS 40.0%
TAGATACTGAGTCTCGGAAT+TGG + chr4_1:73556971-73556990 None:intergenic 40.0%
ATTCAGGGTCATTGAAGATG+AGG - chr4_1:73557238-73557257 Msa0571080:CDS 40.0%
ATTGAAGATGAGGCTACTCT+GGG - chr4_1:73557248-73557267 Msa0571080:CDS 40.0%
CATTCAACTGATGAACCCAA+TGG + chr4_1:73557281-73557300 None:intergenic 40.0%
TTCATCAGTTGAATGTGCCA+AGG - chr4_1:73557286-73557305 Msa0571080:intron 40.0%
TGTATGTGACAAACCCTTCA+TGG - chr4_1:73557339-73557358 Msa0571080:intron 40.0%
GTATGTGACAAACCCTTCAT+GGG - chr4_1:73557340-73557359 Msa0571080:intron 40.0%
! AATCCCAAAGATGTGTCGTT+GGG + chr4_1:73557417-73557436 None:intergenic 40.0%
AAATCCCAAAGATGTGTCGT+TGG + chr4_1:73557418-73557437 None:intergenic 40.0%
!! GGATTTTGACAAACCCTTAC+CGG - chr4_1:73557432-73557451 Msa0571080:CDS 40.0%
! CTTAAGCTCTTGGTAACTCT+TGG + chr4_1:73557480-73557499 None:intergenic 40.0%
CAAGAGTTACCAAGAGCTTA+AGG - chr4_1:73557478-73557497 Msa0571080:intron 40.0%
TTAGGGACTTAGCCAACAAA+CGG - chr4_1:73557544-73557563 Msa0571080:intron 40.0%
! GCCAACAAACGGTTCTAATT+TGG - chr4_1:73557555-73557574 Msa0571080:CDS 40.0%
GAGGAAAAGAAGGTGAATGG+AGG + chr4_1:73547727-73547746 None:intergenic 45.0%
TGGTGGTAAGAAAAGGAGTG+AGG + chr4_1:73547746-73547765 None:intergenic 45.0%
GCTTACGAGTATGCTAAGAG+AGG - chr4_1:73547956-73547975 Msa0571080:three_prime_UTR 45.0%
! GCTGATAGAGCTCGTGATTT+TGG - chr4_1:73548028-73548047 Msa0571080:three_prime_UTR 45.0%
TACCATGAGAGGTCTCCAAT+TGG + chr4_1:73548306-73548325 None:intergenic 45.0%
GAGGTGTGGTAAAGCAAAAC+GGG + chr4_1:73548443-73548462 None:intergenic 45.0%
!!! TTTTGCCTCTGCTGTTTCTG+AGG + chr4_1:73548462-73548481 None:intergenic 45.0%
TATATACTCCTTCTGGGTGC+AGG + chr4_1:73548517-73548536 None:intergenic 45.0%
AGTAAACACTACTACCCTGC+AGG - chr4_1:73548649-73548668 Msa0571080:intron 45.0%
ATTGCCACCAGAAGGCAAAA+TGG - chr4_1:73548793-73548812 Msa0571080:CDS 45.0%
TTGCCACCAGAAGGCAAAAT+GGG - chr4_1:73548794-73548813 Msa0571080:CDS 45.0%
ATGGTACATTGAGGGGAGAT+AGG - chr4_1:73548997-73549016 Msa0571080:intron 45.0%
TGTGTCCAGAATTGTTGGAG+TGG - chr4_1:73549069-73549088 Msa0571080:intron 45.0%
GTGTCCAGAATTGTTGGAGT+GGG - chr4_1:73549070-73549089 Msa0571080:intron 45.0%
TGTCCAGAATTGTTGGAGTG+GGG - chr4_1:73549071-73549090 Msa0571080:intron 45.0%
AAACCCCACTCCAACAATTC+TGG + chr4_1:73549077-73549096 None:intergenic 45.0%
ACTCATTCAGTCTTGACCTC+AGG + chr4_1:73549215-73549234 None:intergenic 45.0%
GTCAAGCCTTACGGTGAAAT+AGG - chr4_1:73549862-73549881 Msa0571080:intron 45.0%
TCAACCTCGAATCTGGTCTA+TGG + chr4_1:73550071-73550090 None:intergenic 45.0%
! AGGTCAGACGAGGCTTTAAT+AGG + chr4_1:73550118-73550137 None:intergenic 45.0%
TATTAAAGCCTCGTCTGACC+TGG - chr4_1:73550117-73550136 Msa0571080:intron 45.0%
CTAAAAGACACCTTCATGGG+TGG - chr4_1:73550344-73550363 Msa0571080:intron 45.0%
! CCACAACCCGTATTTTCTCA+CGG + chr4_1:73551186-73551205 None:intergenic 45.0%
GATGGTGTAAGTGATAGCCT+AGG - chr4_1:73551321-73551340 Msa0571080:intron 45.0%
TCAACCTCGTACCATTGCAT+AGG - chr4_1:73551417-73551436 Msa0571080:intron 45.0%
! TCGAGAACTGTGTGATGGAA+AGG + chr4_1:73552477-73552496 None:intergenic 45.0%
TGTACAGCGAGCAAGTTTCT+CGG - chr4_1:73552826-73552845 Msa0571080:intron 45.0%
GGTGGAATAAAAGGATGGTG+GGG - chr4_1:73552903-73552922 Msa0571080:intron 45.0%
CCTTCGCTGTACTATTTGTC+GGG - chr4_1:73552960-73552979 Msa0571080:intron 45.0%
!! GAGAGAGAGATTGATGATGG+CGG + chr4_1:73553099-73553118 None:intergenic 45.0%
ACGGAGAGAGAGATTGATGA+TGG + chr4_1:73553102-73553121 None:intergenic 45.0%
! CCAACACAAACTGATGACGA+CGG + chr4_1:73553121-73553140 None:intergenic 45.0%
AGTCAAGGAACAACTCAAGC+GGG + chr4_1:73553289-73553308 None:intergenic 45.0%
CAATTCATTCCATTCGGCCA+TGG + chr4_1:73553449-73553468 None:intergenic 45.0%
CATGGCCGAATGGAATGAAT+TGG - chr4_1:73553447-73553466 Msa0571080:intron 45.0%
CCATTACGAGGCTCTTAACT+GGG + chr4_1:73553613-73553632 None:intergenic 45.0%
CCAGTTAAGAGCCTCGTAAT+GGG - chr4_1:73553611-73553630 Msa0571080:intron 45.0%
GCGCCTTATCATACAGTAAG+AGG - chr4_1:73553668-73553687 Msa0571080:intron 45.0%
CCCGCTCATTAGCAAAGATT+AGG - chr4_1:73553740-73553759 Msa0571080:intron 45.0%
! CACACCATTTTGTCAGTGTG+CGG + chr4_1:73554185-73554204 None:intergenic 45.0%
TTTGTTGAACGCTTGCGCAA+AGG - chr4_1:73554206-73554225 Msa0571080:intron 45.0%
ATGTTGGTCATGAGCTATCC+CGG + chr4_1:73554415-73554434 None:intergenic 45.0%
GAGTTCGATCTGATCCATGT+TGG + chr4_1:73554431-73554450 None:intergenic 45.0%
! AGGAGAGAGAAGTATGTCGA+GGG - chr4_1:73554766-73554785 Msa0571080:intron 45.0%
AGCAGAATCAGTGACAATGG+GGG + chr4_1:73555517-73555536 None:intergenic 45.0%
GAGCAGAATCAGTGACAATG+GGG + chr4_1:73555518-73555537 None:intergenic 45.0%
GGAGCAGAATCAGTGACAAT+GGG + chr4_1:73555519-73555538 None:intergenic 45.0%
GCTTATGAGTATGCTAGACG+AGG - chr4_1:73556031-73556050 Msa0571080:intron 45.0%
TCTAGTAGCAGTGGCTGATA+TGG - chr4_1:73556090-73556109 Msa0571080:intron 45.0%
TATTGGTGCAGATGTGACCA+AGG - chr4_1:73556144-73556163 Msa0571080:intron 45.0%
GTTTCATGCAGTGGATCATC+TGG - chr4_1:73556287-73556306 Msa0571080:intron 45.0%
CTGGAATTATTGGGGTTCCA+AGG - chr4_1:73556319-73556338 Msa0571080:intron 45.0%
CATCGTCGTTGTTGCAAAAG+TGG - chr4_1:73556799-73556818 Msa0571080:intron 45.0%
ATAGTCGTTGCTTCAGCTTG+TGG - chr4_1:73556938-73556957 Msa0571080:CDS 45.0%
TCAAAACAGACCTGGCATTC+AGG - chr4_1:73557222-73557241 Msa0571080:CDS 45.0%
CAAAACAGACCTGGCATTCA+GGG - chr4_1:73557223-73557242 Msa0571080:CDS 45.0%
CATTGAAGATGAGGCTACTC+TGG - chr4_1:73557247-73557266 Msa0571080:CDS 45.0%
! TACTCTGGGAAGACTTCCAT+TGG - chr4_1:73557262-73557281 Msa0571080:CDS 45.0%
! ACTCTGGGAAGACTTCCATT+GGG - chr4_1:73557263-73557282 Msa0571080:CDS 45.0%
TGTGCCAAGGACATAGTGAA+AGG - chr4_1:73557299-73557318 Msa0571080:intron 45.0%
TGCACCTTTCACTATGTCCT+TGG + chr4_1:73557306-73557325 None:intergenic 45.0%
! ACATAGTGAAAGGTGCATGC+AGG - chr4_1:73557309-73557328 Msa0571080:intron 45.0%
! CATAGTGAAAGGTGCATGCA+GGG - chr4_1:73557310-73557329 Msa0571080:intron 45.0%
! ATAGTGAAAGGTGCATGCAG+GGG - chr4_1:73557311-73557330 Msa0571080:intron 45.0%
TGTGGTGAAAAGAGGAGGAT+TGG + chr4_1:73557821-73557840 None:intergenic 45.0%
!! AAGAAATTTAATTATAAAAA+TGG - chr4_1:73549308-73549327 Msa0571080:CDS 5.0%
ATGGAGGAGCTACTAGGTTC+AGG + chr4_1:73547711-73547730 None:intergenic 50.0%
AGGTGAATGGAGGAGCTACT+AGG + chr4_1:73547717-73547736 None:intergenic 50.0%
! TCCAATACCAGAGGAAGCAC+CGG + chr4_1:73547848-73547867 None:intergenic 50.0%
! TGCTTCCTCTGGTATTGGAG+AGG - chr4_1:73547849-73547868 Msa0571080:three_prime_UTR 50.0%
CACCAATTGGAGACCTCTCA+TGG - chr4_1:73548301-73548320 Msa0571080:CDS 50.0%
GTTGAAGTTGGAGCAGACGT+AGG - chr4_1:73548713-73548732 Msa0571080:CDS 50.0%
TGAAGTGAGTGCAACTCCAG+TGG - chr4_1:73548941-73548960 Msa0571080:intron 50.0%
GAAGTGAGTGCAACTCCAGT+GGG - chr4_1:73548942-73548961 Msa0571080:intron 50.0%
CATTCACTCACTGATCCCAC+TGG + chr4_1:73548960-73548979 None:intergenic 50.0%
GGTATTTGACTGCACCAGCA+TGG - chr4_1:73549018-73549037 Msa0571080:intron 50.0%
TTGCTAGGTGCTTCTCTTGC+TGG + chr4_1:73549134-73549153 None:intergenic 50.0%
AAGGCCATAGACCAGATTCG+AGG - chr4_1:73550064-73550083 Msa0571080:CDS 50.0%
TTGCTAGAAGCCACCCATGA+AGG + chr4_1:73550357-73550376 None:intergenic 50.0%
! CCGTGAGAAAATACGGGTTG+TGG - chr4_1:73551183-73551202 Msa0571080:intron 50.0%
CAATCTGTCGGCCTATGCAA+TGG + chr4_1:73551431-73551450 None:intergenic 50.0%
CATTGCATAGGCCGACAGAT+TGG - chr4_1:73551429-73551448 Msa0571080:intron 50.0%
GCAAGTCGAGAACTGTGTGA+TGG + chr4_1:73552482-73552501 None:intergenic 50.0%
GTACAGCGAGCAAGTTTCTC+GGG - chr4_1:73552827-73552846 Msa0571080:intron 50.0%
! ATTGGTGTGCAGTCCGCTTT+TGG - chr4_1:73552882-73552901 Msa0571080:intron 50.0%
!! GGAATAAAAGGATGGTGGGG+TGG - chr4_1:73552906-73552925 Msa0571080:intron 50.0%
GTACAGCGAAGGATTCACGA+TGG + chr4_1:73552952-73552971 None:intergenic 50.0%
CCCGACAAATAGTACAGCGA+AGG + chr4_1:73552963-73552982 None:intergenic 50.0%
CCGTCGTCATCAGTTTGTGT+TGG - chr4_1:73553118-73553137 Msa0571080:intron 50.0%
TATCATGCCACTGTGAGCCA+TGG - chr4_1:73553429-73553448 Msa0571080:intron 50.0%
CCCAGTTAAGAGCCTCGTAA+TGG - chr4_1:73553610-73553629 Msa0571080:intron 50.0%
CCCATTACGAGGCTCTTAAC+TGG + chr4_1:73553614-73553633 None:intergenic 50.0%
!!! GTTTTGTTTGGCATGGCAGC+AGG + chr4_1:73553831-73553850 None:intergenic 50.0%
AGCTCCGCACACTGACAAAA+TGG - chr4_1:73554178-73554197 Msa0571080:intron 50.0%
CTTGCGCAAAGGACATGTCT+TGG - chr4_1:73554217-73554236 Msa0571080:intron 50.0%
TACAGACTACACGCAGACCA+AGG + chr4_1:73554267-73554286 None:intergenic 50.0%
GGGATAGCTCATGACCAACA+TGG - chr4_1:73554414-73554433 Msa0571080:intron 50.0%
! GAGGAGAGAGAAGTATGTCG+AGG - chr4_1:73554765-73554784 Msa0571080:intron 50.0%
GGACGGAGTGAGTACTCTAT+TGG + chr4_1:73554897-73554916 None:intergenic 50.0%
GGGAGCAGAATCAGTGACAA+TGG + chr4_1:73555520-73555539 None:intergenic 50.0%
CTAATCACTGGAGCAGCTTC+TGG - chr4_1:73555628-73555647 Msa0571080:intron 50.0%
!! ACTGGAGCAGCTTCTGGAAT+TGG - chr4_1:73555634-73555653 Msa0571080:intron 50.0%
AGTATGCTAGACGAGGAGCA+AGG - chr4_1:73556038-73556057 Msa0571080:intron 50.0%
TAGCAGTGGCTGATATGGCA+AGG - chr4_1:73556095-73556114 Msa0571080:intron 50.0%
GCTGATATGGCAAGGTCTCT+TGG - chr4_1:73556103-73556122 Msa0571080:intron 50.0%
GCGCTTACTGTCTTCAACCT+TGG + chr4_1:73556164-73556183 None:intergenic 50.0%
GTCACGCACATCGTTCAAAG+TGG + chr4_1:73556207-73556226 None:intergenic 50.0%
TCGTTGCTTCAGCTTGTGGA+TGG - chr4_1:73556942-73556961 Msa0571080:CDS 50.0%
GGCATAACAATTGCCACACC+TGG - chr4_1:73557194-73557213 Msa0571080:CDS 50.0%
CTTCAATGACCCTGAATGCC+AGG + chr4_1:73557235-73557254 None:intergenic 50.0%
TGGACCCAACGACACATCTT+TGG - chr4_1:73557410-73557429 Msa0571080:CDS 50.0%
GGACCCAACGACACATCTTT+GGG - chr4_1:73557411-73557430 Msa0571080:CDS 50.0%
GGTGAAAAGAGGAGGATTGG+TGG + chr4_1:73557818-73557837 None:intergenic 50.0%
CCATAGCTGCCTTGCAAATG+AGG + chr4_1:73557976-73557995 None:intergenic 50.0%
CCTCATTTGCAAGGCAGCTA+TGG - chr4_1:73557973-73557992 Msa0571080:CDS 50.0%
ACCGGTGCTTCCTCTGGTAT+TGG - chr4_1:73547844-73547863 Msa0571080:three_prime_UTR 55.0%
!! CCTCTGCTGTTTCTGAGGTG+TGG + chr4_1:73548457-73548476 None:intergenic 55.0%
CCACACCTCAGAAACAGCAG+AGG - chr4_1:73548454-73548473 Msa0571080:CDS 55.0%
!! TGCTGCTTTGCTTGCCTGCA+GGG + chr4_1:73548666-73548685 None:intergenic 55.0%
!! ATGCTGCTTTGCTTGCCTGC+AGG + chr4_1:73548667-73548686 None:intergenic 55.0%
! ACGCCCATTTTGCCTTCTGG+TGG + chr4_1:73548800-73548819 None:intergenic 55.0%
ACCAGAAGGCAAAATGGGCG+TGG - chr4_1:73548799-73548818 Msa0571080:CDS 55.0%
! TCCACGCCCATTTTGCCTTC+TGG + chr4_1:73548803-73548822 None:intergenic 55.0%
TAGATAGGCCAGGTCAGACG+AGG + chr4_1:73550128-73550147 None:intergenic 55.0%
GGACAGGCACTCAAGCAAGT+TGG + chr4_1:73551219-73551238 None:intergenic 55.0%
TCGGCCTATGCAATGGTACG+AGG + chr4_1:73551424-73551443 None:intergenic 55.0%
! GGCCGACAGATTGGTCCATT+AGG - chr4_1:73551438-73551457 Msa0571080:intron 55.0%
!! AAGTTTGGTGCTCCGTCGCA+TGG + chr4_1:73552449-73552468 None:intergenic 55.0%
ACTCAAGCGGGCCTATTGTG+TGG + chr4_1:73553277-73553296 None:intergenic 55.0%
GTAGCCATACCAGATCGGGT+CGG - chr4_1:73554502-73554521 Msa0571080:intron 55.0%
CATACCAGATCGGGTCGGAT+CGG - chr4_1:73554507-73554526 Msa0571080:intron 55.0%
!! AGCAGCTTCTGGAATTGGCG+AGG - chr4_1:73555639-73555658 Msa0571080:intron 55.0%
!! TGGGGTTCCAAGGTTGGTAG+AGG - chr4_1:73556329-73556348 Msa0571080:intron 55.0%
!! GAAGGTGCTTTATCCCCACC+TGG - chr4_1:73557382-73557401 Msa0571080:CDS 55.0%
! TTTATCCCCACCTGGTGGAC+TGG - chr4_1:73557390-73557409 Msa0571080:CDS 55.0%
CACATCACCGGTGCTTCCTC+TGG - chr4_1:73547838-73547857 Msa0571080:three_prime_UTR 60.0%
CTTGGATGCCTGCACCCAGA+AGG - chr4_1:73548506-73548525 Msa0571080:CDS 60.0%
TTATGACCCGTGCGGCAGCA+CGG + chr4_1:73550935-73550954 None:intergenic 60.0%
!! GGTGTGCAGTCCGCTTTTGG+TGG - chr4_1:73552885-73552904 Msa0571080:intron 60.0%
CATTCGGCCATGGCTCACAG+TGG + chr4_1:73553439-73553458 None:intergenic 60.0%
CACTGTGAGCCATGGCCGAA+TGG - chr4_1:73553437-73553456 Msa0571080:intron 60.0%
CGATCCGACCCGATCTGGTA+TGG + chr4_1:73554509-73554528 None:intergenic 60.0%
TAGACCGATCCGACCCGATC+TGG + chr4_1:73554514-73554533 None:intergenic 60.0%
! AACTTCTGGGGAGCAGCTCG+TGG - chr4_1:73556869-73556888 Msa0571080:CDS 60.0%
GGTGCTTTATCCCCACCTGG+TGG - chr4_1:73557385-73557404 Msa0571080:CDS 60.0%
TTGGGTCCAGTCCACCAGGT+GGG + chr4_1:73557399-73557418 None:intergenic 60.0%
TATGACCCGTGCGGCAGCAC+GGG + chr4_1:73550934-73550953 None:intergenic 65.0%
TGGGTCCAGTCCACCAGGTG+GGG + chr4_1:73557398-73557417 None:intergenic 65.0%
GTTGGGTCCAGTCCACCAGG+TGG + chr4_1:73557400-73557419 None:intergenic 65.0%
GTCGTTGGGTCCAGTCCACC+AGG + chr4_1:73557403-73557422 None:intergenic 65.0%
CTTGCACCCGTGCTGCCGCA+CGG - chr4_1:73550925-73550944 Msa0571080:intron 70.0%
TTGCACCCGTGCTGCCGCAC+GGG - chr4_1:73550926-73550945 Msa0571080:intron 70.0%
CGTGCGGCAGCACGGGTGCA+AGG + chr4_1:73550927-73550946 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 73547688 73558006 73547688 ID=Msa0571080;Name=Msa0571080
chr4_1 mRNA 73547688 73558006 73547688 ID=Msa0571080-mRNA-1;Parent=Msa0571080;Name=Msa0571080-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0.4|0.36|1|0.9|0.81|11|498|623
chr4_1 exon 73547688 73548563 73547688 ID=Msa0571080-mRNA-1:exon:25246;Parent=Msa0571080-mRNA-1
chr4_1 exon 73548700 73548831 73548700 ID=Msa0571080-mRNA-1:exon:25245;Parent=Msa0571080-mRNA-1
chr4_1 exon 73549308 73549396 73549308 ID=Msa0571080-mRNA-1:exon:25244;Parent=Msa0571080-mRNA-1
chr4_1 exon 73549477 73549669 73549477 ID=Msa0571080-mRNA-1:exon:25243;Parent=Msa0571080-mRNA-1
chr4_1 exon 73550034 73550103 73550034 ID=Msa0571080-mRNA-1:exon:25242;Parent=Msa0571080-mRNA-1
chr4_1 exon 73556508 73556755 73556508 ID=Msa0571080-mRNA-1:exon:25241;Parent=Msa0571080-mRNA-1
chr4_1 exon 73556856 73557023 73556856 ID=Msa0571080-mRNA-1:exon:25240;Parent=Msa0571080-mRNA-1
chr4_1 exon 73557154 73557285 73557154 ID=Msa0571080-mRNA-1:exon:25239;Parent=Msa0571080-mRNA-1
chr4_1 exon 73557372 73557457 73557372 ID=Msa0571080-mRNA-1:exon:25238;Parent=Msa0571080-mRNA-1
chr4_1 exon 73557552 73557744 73557552 ID=Msa0571080-mRNA-1:exon:25237;Parent=Msa0571080-mRNA-1
chr4_1 exon 73557824 73558006 73557824 ID=Msa0571080-mRNA-1:exon:25236;Parent=Msa0571080-mRNA-1
chr4_1 CDS 73557824 73558006 73557824 ID=Msa0571080-mRNA-1:cds;Parent=Msa0571080-mRNA-1
chr4_1 CDS 73557552 73557744 73557552 ID=Msa0571080-mRNA-1:cds;Parent=Msa0571080-mRNA-1
chr4_1 CDS 73557372 73557457 73557372 ID=Msa0571080-mRNA-1:cds;Parent=Msa0571080-mRNA-1
chr4_1 CDS 73557154 73557285 73557154 ID=Msa0571080-mRNA-1:cds;Parent=Msa0571080-mRNA-1
chr4_1 CDS 73556856 73557023 73556856 ID=Msa0571080-mRNA-1:cds;Parent=Msa0571080-mRNA-1
chr4_1 CDS 73556508 73556755 73556508 ID=Msa0571080-mRNA-1:cds;Parent=Msa0571080-mRNA-1
chr4_1 CDS 73550034 73550103 73550034 ID=Msa0571080-mRNA-1:cds;Parent=Msa0571080-mRNA-1
chr4_1 CDS 73549477 73549669 73549477 ID=Msa0571080-mRNA-1:cds;Parent=Msa0571080-mRNA-1
chr4_1 CDS 73549308 73549396 73549308 ID=Msa0571080-mRNA-1:cds;Parent=Msa0571080-mRNA-1
chr4_1 CDS 73548700 73548831 73548700 ID=Msa0571080-mRNA-1:cds;Parent=Msa0571080-mRNA-1
chr4_1 CDS 73548186 73548563 73548186 ID=Msa0571080-mRNA-1:cds;Parent=Msa0571080-mRNA-1
chr4_1 three_prime_UTR 73547688 73548185 73547688 ID=Msa0571080-mRNA-1:three_prime_utr;Parent=Msa0571080-mRNA-1
Gene Sequence

>Msa0571080

ATGGACCTTATTCATAAGTTCCTGAACCTAGTAGCTCCTCCATTCACCTTCTTTTCCTCACTCCTTTTCTTACCACCATATTGGACCTTCAAATTCTTCCTTTCCATTATCTTTACATTCTTCCCTGAAAATGTTGCTGGTAAAGTTGTTCACATCACCGGTGCTTCCTCTGGTATTGGAGAGCATTTGGCTTACGAGTATGCTAAGAGAGGTGCACGATTAGCACTTTCTGCTAGAAGAGACACAGCACTGCGTGAAGTTGCTGATAGAGCTCGTGATTTTGGTTCTCCTGATGTTATTATAATGCGTGCAGATGTTTCCAAAGTTGATGATTGTAGGCGTTTGGTCGATGAAACCGTTAACCATTTTGGTAGACTGGATCATTTGGTAAACAATGCTGCAATCAGTGCGGCCATGATGTTTGAAGATGTAACTGATATCACCAATTGGAGACCTCTCATGGACACAAACTTTTGGGGATCAGTTTACACAACCCGTTTTGCTTTACCACACCTCAGAAACAGCAGAGGCAAAATTGTGGTCCTTTCATCAATTGATTCTTGGATGCCTGCACCCAGAAGGAGTATATATAATGCAAGCAAAGCAGCATTAGTAAGTCTTTATGAAACATTGAGGGTTGAAGTTGGAGCAGACGTAGGTGTAACAATTGTTACACCAGGTTACATAGAATCTGAATTAACCAAAGGCAAAGTCTTATTGCCACCAGAAGGCAAAATGGGCGTGGACCAAGATATGAGAGATGTTGAAGTGAGTGCAACTCCAGTGGGATCAGTGAGTGAATGTGCAAAATCAATAGTGAATGGTACATTGAGGGGAGATAGGTATTTGACTGCACCAGCATGGTTTAGAATGACATATGTTGTGAAAGTGTTGTGTCCAGAATTGTTGGAGTGGGGTTTCAGAATGTTGTACTTGACTAGATCAAGTAATACTCCAGCAAGAGAAGCACCTAGCAAAAAGATTTTGGATGCTACTGGAATCAAAAACGTGTTGGTGCGAACAGAAAATATGGCAAGAAAAGTTGTACTAATCACTGGAGCAGCTTCTGGAATTGGCGAGCAACTAGCTTATGAGTATGCTAGACGAGGAGCAAGGTTGTCACTTGTTGACATTAAAATGGAGAATCTAGTAGCAGTGGCTGATATGGCAAGGTCTCTTGGTTCCCCTGATGTTATCATTATTGGTGCAGATGTGACCAAGGTTGAAGACAGTAAGCGCTTTGTTGATGAAACAGTGAACCACTTTGAACGATTGGATCATCTGGTAAATAATGCTGGAATTATTGGGGTTCCAAGGTTGGTAGAGGATTTTTCGGATTTGTCTAAATACACACAAATTATGGAAACAAACTTCTGGGGAGCAGCTCGTGGCACTTTATATGCAATCCCACATCTTAAAAATAGTAAAGGCAGGATCATAGTCGTTGCTTCAGCTTGTGGATGGTTTCCAATTCCGAGACTCAGTATCTATAACGCTAGTAAGGCAGCGATAATAAGCTTCTTTGAGACTTTAAGAATTGAACTTGGTTGGTCTATTGGCATAACAATTGCCACACCTGGTTTTATCAAAACAGACCTGGCATTCAGGGTCATTGAAGATGAGGCTACTCTGGGAAGACTTCCATTGGGTTCATCAGTTGAATGTGCCAAGGACATAGTGAAAGGTGCATGCAGGGGAGATATGTATGTGACAAACCCTTCATGGGTCAAAGTAATATTTTATTGGAAGGTGCTTTATCCCCACCTGGTGGACTGGACCCAACGACACATCTTTGGGATTTTGACAAACCCTTACCGGAAGAATGATAATCTGCTTATCTCCAAGAGTTACCAAGAGCTTAAGGTAGAATAA
Protein sequence

>Msa0571080

MDLIHKFLNLVAPPFTFFSSLLFLPPYWTFKFFLSIIFTFFPENVAGKVVHITGASSGIGEHLAYEYAKRGARLALSARRDTALREVADRARDFGSPDVIIMRADVSKVDDCRRLVDETVNHFGRLDHLVNNAAISAAMMFEDVTDITNWRPLMDTNFWGSVYTTRFALPHLRNSRGKIVVLSSIDSWMPAPRRSIYNASKAALVSLYETLRVEVGADVGVTIVTPGYIESELTKGKVLLPPEGKMGVDQDMRDVEVSATPVGSVSECAKSIVNGTLRGDRYLTAPAWFRMTYVVKVLCPELLEWGFRMLYLTRSSNTPAREAPSKKILDATGIKNVLVRTENMARKVVLITGAASGIGEQLAYEYARRGARLSLVDIKMENLVAVADMARSLGSPDVIIIGADVTKVEDSKRFVDETVNHFERLDHLVNNAGIIGVPRLVEDFSDLSKYTQIMETNFWGAARGTLYAIPHLKNSKGRIIVVASACGWFPIPRLSIYNASKAAIISFFETLRIELGWSIGITIATPGFIKTDLAFRVIEDEATLGRLPLGSSVECAKDIVKGACRGDMYVTNPSWVKVIFYWKVLYPHLVDWTQRHIFGILTNPYRKNDNLLISKSYQELKVE*