AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0460660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0460660 MtrunA17_Chr3g0109811 95.849 1036 38 2 1 1035 1 1032 0.0 2069
Msa0460660 MtrunA17_Chr3g0094741 41.448 1105 525 21 15 1032 26 1095 0.0 762
Msa0460660 MtrunA17_Chr5g0442001 42.134 1106 528 25 8 1032 10 1084 0.0 747
Msa0460660 MtrunA17_Chr8g0362061 38.826 1056 550 24 16 1032 10 1008 0.0 668
Msa0460660 MtrunA17_Chr6g0463421 39.042 981 520 18 15 954 12 955 0.0 637
Msa0460660 MtrunA17_Chr6g0463421 53.968 63 29 0 972 1034 1034 1096 4.05e-16 84.0
Msa0460660 MtrunA17_Chr1g0202151 38.825 953 449 15 15 898 11 898 0.0 623
Msa0460660 MtrunA17_Chr7g0244411 38.095 924 478 18 14 898 10 878 0.0 587
Msa0460660 MtrunA17_Chr1g0167471 41.244 788 389 11 3 773 8 738 0.0 564
Msa0460660 MtrunA17_Chr4g0013271 47.545 448 224 5 266 711 36 474 8.01e-138 441
Msa0460660 MtrunA17_Chr3g0130621 33.134 335 208 6 293 625 56 376 6.83e-45 168
Msa0460660 MtrunA17_Chr3g0130621 30.347 346 207 7 309 643 20 342 3.54e-38 149
Msa0460660 MtrunA17_Chr3g0130621 30.996 271 173 3 288 558 104 360 6.46e-32 130
Msa0460660 MtrunA17_Chr3g0130621 28.472 288 192 4 357 643 16 290 4.79e-29 121
Msa0460660 MtrunA17_Chr8g0384631 34.007 297 179 6 331 625 25 306 3.44e-40 153
Msa0460660 MtrunA17_Chr8g0384631 30.545 275 177 3 293 567 39 299 1.15e-32 131
Msa0460660 MtrunA17_Chr8g0384631 28.114 281 177 5 365 643 15 272 2.52e-25 109
Msa0460660 MtrunA17_Chr8g0384631 28.571 231 151 4 292 522 90 306 7.97e-19 89.7
Msa0460660 MtrunA17_Chr6g0457381 31.786 280 152 9 294 558 79 334 8.85e-33 132
Msa0460660 MtrunA17_Chr6g0457381 25.000 316 210 7 306 611 38 336 1.76e-25 110
Msa0460660 MtrunA17_Chr6g0457381 26.946 334 207 9 325 643 5 316 1.48e-23 104
Msa0460660 MtrunA17_Chr6g0457381 30.769 260 134 10 304 541 149 384 1.39e-22 101
Msa0460660 MtrunA17_Chr6g0457381 29.897 194 119 3 302 479 193 385 2.28e-18 88.6
Msa0460660 MtrunA17_Chr5g0415871 29.765 383 198 10 325 648 16 386 3.41e-31 127
Msa0460660 MtrunA17_Chr5g0415871 26.829 164 117 2 482 643 4 166 3.04e-11 66.6
Msa0460660 MtrunA17_Chr2g0317861 30.435 345 204 9 306 633 165 490 3.45e-31 129
Msa0460660 MtrunA17_Chr2g0317861 28.782 271 175 6 295 559 207 465 1.99e-23 105
Msa0460660 MtrunA17_Chr2g0317861 29.677 155 107 1 304 456 323 477 3.00e-15 79.7
Msa0460660 MtrunA17_Chr2g0317861 27.111 225 144 6 415 633 116 326 2.47e-11 67.4
Msa0460660 MtrunA17_Chr7g0233601 30.201 298 185 5 267 560 121 399 2.08e-27 117
Msa0460660 MtrunA17_Chr7g0233601 27.933 358 195 10 324 643 47 379 1.08e-23 105
Msa0460660 MtrunA17_Chr7g0233601 30.164 305 186 8 315 610 112 398 2.29e-21 98.6
Msa0460660 MtrunA17_Chr7g0253611 27.966 354 211 13 261 600 149 472 1.99e-25 114
Msa0460660 MtrunA17_Chr7g0253611 26.984 252 160 6 402 643 128 365 9.57e-21 99.0
Msa0460660 MtrunA17_Chr7g0253611 28.365 208 107 9 309 504 301 478 9.63e-12 69.7
Msa0460660 MtrunA17_Chr3g0130871 30.112 269 150 5 294 540 73 325 3.28e-25 107
Msa0460660 MtrunA17_Chr3g0130871 28.660 321 170 12 357 643 30 325 2.90e-23 102
Msa0460660 MtrunA17_Chr3g0130871 27.843 255 160 7 306 550 31 271 2.61e-19 90.5
Msa0460660 MtrunA17_Chr3g0123301 27.202 386 207 9 312 631 154 531 1.69e-23 105
Msa0460660 MtrunA17_Chr3g0123301 30.872 298 162 11 287 558 235 514 2.33e-22 102
Msa0460660 MtrunA17_Chr3g0123301 29.310 290 181 10 364 642 154 430 2.62e-22 102
Msa0460660 MtrunA17_Chr7g0220131 32.203 295 153 12 377 643 23 298 1.69e-23 105
Msa0460660 MtrunA17_Chr7g0220131 24.507 355 201 11 293 607 49 376 6.12e-18 88.2
Msa0460660 MtrunA17_Chr7g0220131 31.628 215 132 7 279 480 202 414 2.32e-14 77.0
Msa0460660 MtrunA17_Chr7g0239601 30.769 208 124 6 446 649 21 212 2.70e-21 93.6
Msa0460660 MtrunA17_Chr7g0239601 34.483 174 111 3 306 479 39 209 9.02e-21 92.0
Msa0460660 MtrunA17_Chr7g0239601 30.270 185 118 1 407 591 34 207 4.38e-19 87.0
Msa0460660 MtrunA17_Chr7g0239601 31.250 144 86 3 288 426 73 208 2.26e-13 70.5
Msa0460660 MtrunA17_Chr3g0142381 23.200 375 240 12 295 643 47 399 6.77e-19 91.7
Msa0460660 MtrunA17_Chr3g0142381 30.672 238 137 9 279 499 198 424 7.18e-16 82.0
Msa0460660 MtrunA17_Chr3g0142381 29.817 218 108 7 452 643 46 244 7.92e-15 79.0
Msa0460660 MtrunA17_Chr3g0112381 34.932 146 92 3 335 479 17 160 3.36e-18 83.2
Msa0460660 MtrunA17_Chr3g0112381 33.103 145 89 3 504 643 17 158 2.06e-15 75.1
Msa0460660 MtrunA17_Chr3g0112381 30.496 141 83 4 293 426 27 159 1.21e-14 72.8
Msa0460660 MtrunA17_Chr3g0112381 30.519 154 94 2 443 594 19 161 1.64e-13 69.7
Msa0460660 MtrunA17_Chr1g0146211 28.035 346 176 13 278 564 5 336 1.40e-16 82.8
Msa0460660 MtrunA17_Chr1g0146211 22.039 304 197 10 350 622 49 343 1.58e-13 73.6
Msa0460660 MtrunA17_Chr3g0140201 26.316 342 200 12 274 576 18 346 5.05e-15 79.0
Msa0460660 MtrunA17_Chr5g0404371 22.613 398 215 12 305 636 62 432 4.51e-14 75.9
Msa0460660 MtrunA17_Chr5g0404371 25.468 267 182 5 292 558 156 405 1.55e-13 74.3
Msa0460660 MtrunA17_Chr2g0300301 51.852 54 26 0 977 1030 298 351 2.26e-12 69.7
Msa0460660 MtrunA17_Chr8g0343511 49.123 57 29 0 974 1030 312 368 2.45e-12 69.7
Msa0460660 MtrunA17_Chr3g0140211 36.047 86 49 1 306 385 17 102 3.36e-12 64.3
Msa0460660 MtrunA17_Chr5g0409431 42.593 54 31 0 977 1030 200 253 5.22e-12 67.4
Msa0460660 MtrunA17_Chr1g0146221 40.244 82 47 1 306 385 14 95 9.72e-12 62.4
Msa0460660 MtrunA17_Chr8g0369441 39.506 81 47 1 952 1030 252 332 4.60e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0460660 AT1G65920.1 47.086 1064 471 23 3 1033 1 1005 0.0 894
Msa0460660 AT1G65920.2 46.608 1017 451 23 50 1033 2 959 0.0 838
Msa0460660 AT5G19420.1 41.906 1112 535 27 1 1032 7 1087 0.0 757
Msa0460660 AT5G12350.1 41.310 1099 529 24 5 1032 10 1063 0.0 745
Msa0460660 AT5G19420.2 41.720 1093 528 25 20 1032 58 1121 0.0 742
Msa0460660 AT5G19420.3 48.285 758 356 12 1 736 7 750 0.0 656
Msa0460660 AT1G69710.1 38.570 1063 560 23 15 1032 24 1038 0.0 631
Msa0460660 AT1G69710.2 38.570 1063 560 23 15 1032 11 1025 0.0 631
Msa0460660 AT5G42140.2 44.847 718 360 10 16 726 12 700 0.0 595
Msa0460660 AT5G42140.2 33.193 238 125 3 829 1032 823 1060 1.23e-22 105
Msa0460660 AT5G42140.1 44.847 718 360 10 16 726 12 700 0.0 595
Msa0460660 AT5G42140.1 33.193 238 125 3 829 1032 823 1060 1.23e-22 105
Msa0460660 AT4G14368.1 43.521 710 341 14 15 711 16 678 0.0 560
Msa0460660 AT3G47660.2 36.232 966 512 21 11 901 7 943 0.0 552
Msa0460660 AT1G76950.1 38.818 863 420 19 261 1032 234 1079 2.59e-178 550
Msa0460660 AT3G47660.1 36.025 966 511 22 11 901 10 943 1.15e-176 541
Msa0460660 AT3G47660.3 36.025 966 511 22 11 901 7 940 1.51e-176 540
Msa0460660 AT3G47660.5 36.025 966 511 22 11 901 7 940 1.51e-176 540
Msa0460660 AT3G23270.2 37.424 823 426 18 264 1026 214 1007 4.42e-170 527
Msa0460660 AT3G23270.1 37.897 818 424 20 264 1026 210 998 2.13e-167 520
Msa0460660 AT3G47660.4 34.137 996 525 25 11 901 10 979 2.96e-166 515
Msa0460660 AT3G47660.7 36.506 704 366 14 264 901 110 798 9.98e-144 450
Msa0460660 AT3G47660.6 36.506 704 366 14 264 901 177 865 5.38e-143 450
Msa0460660 AT4G14368.2 32.249 738 382 20 15 711 16 676 3.37e-86 301
Msa0460660 AT4G14368.2 26.047 215 143 3 829 1030 805 1016 5.31e-14 77.4
Msa0460660 AT4G14368.3 32.249 738 382 20 15 711 11 671 3.81e-86 301
Msa0460660 AT4G14368.3 26.047 215 143 3 829 1030 800 1011 5.87e-14 77.4
Msa0460660 AT4G14368.4 32.162 740 382 20 15 711 16 678 6.90e-86 300
Msa0460660 AT4G14368.4 26.047 215 143 3 829 1030 807 1018 5.18e-14 77.4
Msa0460660 AT5G63860.1 33.333 333 207 5 295 625 58 377 3.72e-46 172
Msa0460660 AT5G63860.1 30.678 339 216 7 309 643 20 343 1.51e-39 153
Msa0460660 AT5G63860.1 34.173 278 170 2 288 565 104 368 4.01e-35 140
Msa0460660 AT3G02510.3 32.258 279 151 9 294 558 23 277 8.16e-36 139
Msa0460660 AT3G02510.3 28.188 298 184 11 325 611 1 279 4.14e-28 117
Msa0460660 AT3G02510.3 31.050 219 122 8 304 516 92 287 3.35e-21 96.7
Msa0460660 AT3G02510.3 27.143 280 170 9 377 643 1 259 5.33e-19 90.1
Msa0460660 AT3G02510.3 29.688 192 117 3 305 479 139 329 9.21e-19 89.4
Msa0460660 AT3G02510.1 32.258 279 151 9 294 558 81 335 1.99e-35 140
Msa0460660 AT3G02510.1 27.301 326 207 11 297 611 31 337 2.91e-29 121
Msa0460660 AT3G02510.1 27.108 332 208 9 325 643 7 317 2.36e-26 113
Msa0460660 AT3G02510.1 31.050 219 122 8 304 516 150 345 7.42e-20 93.6
Msa0460660 AT3G02510.1 29.231 195 120 3 302 479 194 387 1.35e-17 86.7
Msa0460660 AT5G60870.1 29.769 346 214 6 260 593 114 442 2.32e-35 140
Msa0460660 AT5G60870.1 28.947 342 212 8 319 645 115 440 1.20e-28 120
Msa0460660 AT5G60870.1 29.014 355 195 10 324 643 49 381 4.64e-27 116
Msa0460660 AT5G60870.2 29.462 353 213 7 260 593 114 449 4.36e-33 134
Msa0460660 AT5G60870.2 28.940 349 210 9 319 645 115 447 6.09e-28 119
Msa0460660 AT5G60870.2 29.014 355 195 10 324 643 49 381 9.45e-27 115
Msa0460660 AT1G27060.1 29.834 362 220 11 293 643 37 375 4.27e-32 130
Msa0460660 AT5G60870.4 29.861 288 181 4 260 543 114 384 4.59e-31 127
Msa0460660 AT5G60870.4 29.014 355 195 10 324 643 49 381 3.78e-27 115
Msa0460660 AT5G60870.4 28.826 281 177 5 319 590 115 381 1.14e-23 105
Msa0460660 AT5G16040.1 25.978 358 225 11 267 611 7 337 9.26e-30 123
Msa0460660 AT5G16040.1 27.893 337 199 9 325 643 7 317 3.61e-27 115
Msa0460660 AT5G16040.1 31.050 219 122 8 304 516 150 345 4.51e-21 97.4
Msa0460660 AT5G16040.1 26.642 274 135 5 425 643 1 263 6.73e-18 87.8
Msa0460660 AT5G16040.1 28.922 204 122 4 302 488 194 391 2.03e-17 86.3
Msa0460660 AT3G03790.1 29.491 373 208 15 254 607 139 475 2.80e-28 123
Msa0460660 AT3G03790.1 27.477 222 141 4 431 643 152 362 6.19e-18 90.1
Msa0460660 AT3G03790.2 29.521 376 207 16 254 607 139 478 9.16e-28 122
Msa0460660 AT3G03790.2 26.877 253 159 7 402 643 128 365 1.37e-18 92.4
Msa0460660 AT3G03790.3 29.521 376 207 16 254 607 139 478 1.22e-27 121
Msa0460660 AT3G03790.3 26.984 252 160 6 402 643 128 365 1.88e-18 92.0
Msa0460660 AT3G02510.2 31.076 251 135 9 294 530 81 307 5.89e-27 113
Msa0460660 AT3G02510.2 27.575 301 186 8 325 614 7 286 4.73e-24 104
Msa0460660 AT3G02510.2 26.910 301 185 12 267 558 7 281 9.66e-22 97.8
Msa0460660 AT3G02510.2 25.746 268 133 5 431 643 7 263 2.80e-15 78.6
Msa0460660 AT3G55580.1 30.357 280 158 5 338 591 215 483 6.41e-26 113
Msa0460660 AT3G55580.1 27.456 397 233 10 281 636 94 476 2.25e-23 105
Msa0460660 AT3G55580.1 35.882 170 106 3 306 474 313 480 2.21e-22 102
Msa0460660 AT3G15430.6 28.344 314 200 8 306 609 165 463 2.49e-25 111
Msa0460660 AT3G15430.6 30.451 266 165 8 360 619 115 366 2.02e-21 99.8
Msa0460660 AT3G15430.6 27.037 270 180 5 295 559 207 464 4.85e-19 92.0
Msa0460660 AT3G15430.6 28.017 232 144 6 294 517 258 474 1.39e-14 78.2
Msa0460660 AT3G15430.6 27.966 236 150 7 415 643 116 338 1.68e-13 74.7
Msa0460660 AT3G15430.6 25.749 167 121 2 293 456 310 476 2.70e-11 67.8
Msa0460660 AT3G15430.4 28.344 314 200 8 306 609 165 463 2.49e-25 111
Msa0460660 AT3G15430.4 30.451 266 165 8 360 619 115 366 2.02e-21 99.8
Msa0460660 AT3G15430.4 27.037 270 180 5 295 559 207 464 4.85e-19 92.0
Msa0460660 AT3G15430.4 28.017 232 144 6 294 517 258 474 1.39e-14 78.2
Msa0460660 AT3G15430.4 27.966 236 150 7 415 643 116 338 1.68e-13 74.7
Msa0460660 AT3G15430.4 25.749 167 121 2 293 456 310 476 2.70e-11 67.8
Msa0460660 AT3G15430.2 28.344 314 200 8 306 609 165 463 2.49e-25 111
Msa0460660 AT3G15430.2 30.451 266 165 8 360 619 115 366 2.02e-21 99.8
Msa0460660 AT3G15430.2 27.037 270 180 5 295 559 207 464 4.85e-19 92.0
Msa0460660 AT3G15430.2 28.017 232 144 6 294 517 258 474 1.39e-14 78.2
Msa0460660 AT3G15430.2 27.966 236 150 7 415 643 116 338 1.68e-13 74.7
Msa0460660 AT3G15430.2 25.749 167 121 2 293 456 310 476 2.70e-11 67.8
Msa0460660 AT3G15430.3 28.344 314 200 8 306 609 165 463 2.49e-25 111
Msa0460660 AT3G15430.3 30.451 266 165 8 360 619 115 366 2.02e-21 99.8
Msa0460660 AT3G15430.3 27.037 270 180 5 295 559 207 464 4.85e-19 92.0
Msa0460660 AT3G15430.3 28.017 232 144 6 294 517 258 474 1.39e-14 78.2
Msa0460660 AT3G15430.3 27.966 236 150 7 415 643 116 338 1.68e-13 74.7
Msa0460660 AT3G15430.3 25.749 167 121 2 293 456 310 476 2.70e-11 67.8
Msa0460660 AT3G15430.5 28.344 314 200 8 306 609 165 463 2.49e-25 111
Msa0460660 AT3G15430.5 30.451 266 165 8 360 619 115 366 2.02e-21 99.8
Msa0460660 AT3G15430.5 27.037 270 180 5 295 559 207 464 4.85e-19 92.0
Msa0460660 AT3G15430.5 28.017 232 144 6 294 517 258 474 1.39e-14 78.2
Msa0460660 AT3G15430.5 27.966 236 150 7 415 643 116 338 1.68e-13 74.7
Msa0460660 AT3G15430.5 25.749 167 121 2 293 456 310 476 2.70e-11 67.8
Msa0460660 AT3G15430.1 28.344 314 200 8 306 609 165 463 2.49e-25 111
Msa0460660 AT3G15430.1 30.451 266 165 8 360 619 115 366 2.02e-21 99.8
Msa0460660 AT3G15430.1 27.037 270 180 5 295 559 207 464 4.85e-19 92.0
Msa0460660 AT3G15430.1 28.017 232 144 6 294 517 258 474 1.39e-14 78.2
Msa0460660 AT3G15430.1 27.966 236 150 7 415 643 116 338 1.68e-13 74.7
Msa0460660 AT3G15430.1 25.749 167 121 2 293 456 310 476 2.70e-11 67.8
Msa0460660 AT5G08710.1 27.726 321 220 7 328 643 54 367 2.53e-25 110
Msa0460660 AT5G08710.1 26.842 380 231 11 295 646 73 433 2.93e-25 110
Msa0460660 AT5G08710.1 37.423 163 93 4 488 643 43 203 3.01e-19 92.4
Msa0460660 AT5G08710.1 29.703 202 120 6 293 479 238 432 1.73e-17 87.0
Msa0460660 AT5G08710.1 30.233 258 164 5 294 540 178 430 1.72e-16 84.0
Msa0460660 AT5G11580.1 27.083 384 216 15 293 622 57 430 2.71e-25 112
Msa0460660 AT5G11580.1 26.966 356 214 11 295 611 6 354 3.32e-20 96.3
Msa0460660 AT5G11580.1 26.715 277 150 9 412 647 18 282 3.79e-15 80.5
Msa0460660 AT5G16040.2 28.904 301 182 8 325 614 7 286 4.19e-25 108
Msa0460660 AT5G16040.2 25.497 302 188 9 267 558 7 281 1.50e-22 100
Msa0460660 AT5G16040.2 26.545 275 136 5 425 644 1 264 2.40e-18 88.2
Msa0460660 AT5G60870.3 28.520 277 175 4 329 593 8 273 7.19e-25 105
Msa0460660 AT5G60870.3 28.807 243 143 6 272 506 10 230 2.96e-19 89.7
Msa0460660 AT5G60870.3 30.120 249 145 7 412 645 37 271 1.91e-18 87.4
Msa0460660 AT5G60870.3 30.357 224 130 5 431 643 4 212 1.16e-16 82.0
Msa0460660 AT3G26100.5 28.975 283 171 6 295 558 240 511 1.51e-23 106
Msa0460660 AT3G26100.5 27.035 344 202 9 310 623 201 525 7.82e-23 104
Msa0460660 AT3G26100.5 27.597 308 208 6 307 609 147 444 6.89e-22 101
Msa0460660 AT3G26100.5 27.243 301 181 8 360 643 147 426 4.82e-20 95.5
Msa0460660 AT3G26100.6 28.975 283 171 6 295 558 240 511 1.51e-23 106
Msa0460660 AT3G26100.6 27.035 344 202 9 310 623 201 525 7.82e-23 104
Msa0460660 AT3G26100.6 27.597 308 208 6 307 609 147 444 6.89e-22 101
Msa0460660 AT3G26100.6 27.243 301 181 8 360 643 147 426 4.82e-20 95.5
Msa0460660 AT3G26100.2 28.975 283 171 6 295 558 240 511 1.51e-23 106
Msa0460660 AT3G26100.2 27.035 344 202 9 310 623 201 525 7.82e-23 104
Msa0460660 AT3G26100.2 27.597 308 208 6 307 609 147 444 6.89e-22 101
Msa0460660 AT3G26100.2 27.243 301 181 8 360 643 147 426 4.82e-20 95.5
Msa0460660 AT3G53830.3 25.055 451 235 13 255 636 44 460 2.13e-23 105
Msa0460660 AT3G53830.3 27.431 288 156 8 290 542 200 469 8.73e-23 103
Msa0460660 AT3G26100.3 28.975 283 171 6 295 558 140 411 2.60e-23 104
Msa0460660 AT3G26100.3 27.035 344 202 9 310 623 101 425 2.42e-22 101
Msa0460660 AT3G26100.3 27.597 308 208 6 307 609 47 344 2.30e-21 99.0
Msa0460660 AT3G26100.3 26.846 298 186 7 360 643 47 326 6.81e-20 94.4
Msa0460660 AT3G26100.4 28.975 283 171 6 295 558 140 411 2.60e-23 104
Msa0460660 AT3G26100.4 27.035 344 202 9 310 623 101 425 2.42e-22 101
Msa0460660 AT3G26100.4 27.597 308 208 6 307 609 47 344 2.30e-21 99.0
Msa0460660 AT3G26100.4 26.846 298 186 7 360 643 47 326 6.81e-20 94.4
Msa0460660 AT3G26100.1 28.975 283 171 6 295 558 140 411 2.60e-23 104
Msa0460660 AT3G26100.1 27.035 344 202 9 310 623 101 425 2.42e-22 101
Msa0460660 AT3G26100.1 27.597 308 208 6 307 609 47 344 2.30e-21 99.0
Msa0460660 AT3G26100.1 26.846 298 186 7 360 643 47 326 6.81e-20 94.4
Msa0460660 AT5G08710.2 27.875 287 194 6 328 609 54 332 1.20e-22 100
Msa0460660 AT5G08710.2 37.423 163 93 4 488 643 43 203 8.54e-20 92.4
Msa0460660 AT5G08710.2 29.245 212 126 5 305 506 135 332 3.69e-17 84.7
Msa0460660 AT5G08710.2 26.165 279 174 8 295 559 73 333 1.80e-15 79.3
Msa0460660 AT3G02300.1 32.677 254 136 7 415 649 66 303 2.09e-22 102
Msa0460660 AT3G02300.1 24.850 334 194 11 308 607 65 375 2.60e-17 86.7
Msa0460660 AT3G02300.1 27.564 156 95 5 294 434 154 306 5.75e-14 76.3
Msa0460660 AT3G53830.4 27.431 288 156 8 290 542 228 497 2.16e-22 102
Msa0460660 AT3G53830.4 29.615 260 139 6 409 636 241 488 3.06e-22 102
Msa0460660 AT3G02300.2 32.677 254 136 7 415 649 77 314 2.65e-22 102
Msa0460660 AT3G02300.2 24.850 334 194 11 308 607 76 386 2.51e-17 86.7
Msa0460660 AT3G02300.2 27.564 156 95 5 294 434 165 317 5.64e-14 76.3
Msa0460660 AT1G19880.1 24.740 384 243 12 295 650 47 412 1.38e-18 91.3
Msa0460660 AT1G19880.1 28.571 217 118 6 452 643 46 250 5.92e-15 79.7
Msa0460660 AT5G11580.2 26.829 287 168 12 368 622 3 279 3.36e-18 88.6
Msa0460660 AT5G11580.2 30.252 238 122 10 358 564 48 272 1.80e-12 70.9
Msa0460660 AT3G53830.1 26.522 230 128 6 290 484 200 423 1.94e-17 86.7
Msa0460660 AT3G53830.1 23.892 406 207 12 255 591 44 416 1.81e-15 80.5
Msa0460660 AT3G53830.2 26.522 230 128 6 290 484 228 451 3.77e-17 85.9
Msa0460660 AT3G53830.2 28.372 215 111 5 409 591 241 444 3.12e-14 77.0
Msa0460660 AT5G48330.2 23.577 369 213 11 305 623 83 432 2.73e-14 77.0
Msa0460660 AT5G48330.2 27.848 237 148 5 412 644 84 301 2.32e-13 74.3
Msa0460660 AT5G48330.1 23.514 370 213 11 305 623 83 433 3.90e-14 76.6
Msa0460660 AT5G48330.1 27.731 238 148 5 412 644 84 302 2.50e-13 73.9
Msa0460660 AT5G20540.1 55.556 54 24 0 977 1030 330 383 1.86e-13 73.9
Msa0460660 AT3G14000.2 47.368 57 30 0 974 1030 317 373 5.98e-12 69.3
Msa0460660 AT3G14000.1 47.368 57 30 0 974 1030 317 373 5.98e-12 69.3
Msa0460660 AT1G54180.2 45.614 57 31 0 974 1030 287 343 1.10e-11 68.2
Msa0460660 AT2G35600.2 47.368 57 30 0 974 1030 274 330 1.73e-11 67.4
Msa0460660 AT2G35600.1 47.368 57 30 0 974 1030 274 330 1.73e-11 67.4
Msa0460660 AT2G35600.3 47.368 57 30 0 974 1030 274 330 1.73e-11 67.4
Msa0460660 AT1G54180.1 45.614 57 31 0 974 1030 313 369 2.17e-11 67.4

Find 244 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTAATTCATGAATATTT+TGG 0.114086 3_3:-58145936 Msa0460660:three_prime_UTR
AGTGCATTAAAATCCAAATT+TGG 0.135408 3_3:-58146544 Msa0460660:CDS
TCCCTCTCCTTGAACAATTT+TGG 0.137886 3_3:+58150443 None:intergenic
AAGAATACTTCTCCCAAATT+TGG 0.138458 3_3:+58146531 None:intergenic
ACAAGAATTTCTTCCAAATT+TGG 0.165099 3_3:-58146644 Msa0460660:CDS
GAGAAGTATTCTTCTTAAAA+AGG 0.224871 3_3:-58146521 Msa0460660:CDS
TTAAGAGACTCAACTTCTTT+TGG 0.229331 3_3:+58148613 None:intergenic
GATTGGTCACTAATTGAAAT+AGG 0.251954 3_3:+58148028 None:intergenic
GACAATGGAAGAAGTTTCTT+TGG 0.257957 3_3:-58151730 Msa0460660:CDS
AATGCACTAGAGAATATTAT+AGG 0.261303 3_3:+58146559 None:intergenic
TAAACAAATGCAACCATAAA+AGG 0.264022 3_3:-58151962 Msa0460660:five_prime_UTR
TCATAAAAGCTTTGGCATTA+AGG 0.265729 3_3:-58147162 Msa0460660:CDS
TTTATATTGCTATGAATATC+TGG 0.278148 3_3:+58149294 None:intergenic
CTTAAACTACTAAAAGCTTT+TGG 0.282594 3_3:+58149933 None:intergenic
CTGTCCGTGTTGGCATTTCT+TGG 0.283585 3_3:+58146595 None:intergenic
GCCTTAAGCGTGTGAGATTT+AGG 0.288205 3_3:-58146381 Msa0460660:intron
TTCTTCTATGAGCAACTTAT+CGG 0.295565 3_3:+58147481 None:intergenic
GGTGGAATTGGTTGCCTTGT+AGG 0.298119 3_3:-58149156 Msa0460660:CDS
GCATTTGTTTATTAAGGATT+TGG 0.300734 3_3:+58151974 None:intergenic
ATGGTTGCATTTGTTTATTA+AGG 0.305653 3_3:+58151968 None:intergenic
GAAAGACTCTTGTTCAGATT+TGG 0.308461 3_3:-58148827 Msa0460660:CDS
ACCTTACTATAATATTAAAA+TGG 0.308837 3_3:+58145858 None:intergenic
GCAATGGGAAGTGCAAAATA+TGG 0.311634 3_3:-58148328 Msa0460660:CDS
ATTCTAAATTGTGCTGAATA+TGG 0.313248 3_3:+58147551 None:intergenic
ATGATATGGGGTGGTGGAAT+TGG 0.317338 3_3:-58149168 Msa0460660:CDS
TATCTAGGATGAGAGAAATT+TGG 0.320240 3_3:-58150514 Msa0460660:intron
GATTGAAAGCTGTGATTTCT+AGG 0.320836 3_3:-58149965 Msa0460660:CDS
GTATGTATAGGTGCCAAATT+TGG 0.326104 3_3:+58146631 None:intergenic
ATGCACTAGAGAATATTATA+GGG 0.326166 3_3:+58146560 None:intergenic
TGAATATCTGGATTAATATA+TGG 0.326167 3_3:+58149306 None:intergenic
CCTCCTGCCTCCGCACTTGT+AGG 0.328701 3_3:-58149213 Msa0460660:CDS
CGAAAGGCCTTGCTCTTAAC+CGG 0.330346 3_3:+58147884 None:intergenic
TCATTTCTTTGTTAGTTTGA+TGG 0.331691 3_3:+58151751 None:intergenic
ACATGTGCTTTGACGGATTC+CGG 0.336666 3_3:-58148868 Msa0460660:CDS
CAAGGGAAGTGTGGAAGGTT+AGG 0.337218 3_3:-58148982 Msa0460660:CDS
ACGTGGGGCAAAGGTGAAAA+TGG 0.337439 3_3:-58148175 Msa0460660:CDS
CTCTTAGTCAAACGTGTTAC+CGG 0.338233 3_3:-58147688 Msa0460660:CDS
CATAAAAGCTTTGGCATTAA+GGG 0.340615 3_3:-58147161 Msa0460660:intron
GCACTTAGCAGCTTCCTCTT+TGG 0.341820 3_3:+58147201 None:intergenic
AGTCGGAAAGGACAGAGTTT+TGG 0.343433 3_3:+58150905 None:intergenic
GAGGTTCATTGTTTCACAAT+AGG 0.347148 3_3:+58151828 None:intergenic
CTTAGTGTAGGAGGTGATAC+TGG 0.348331 3_3:-58146026 Msa0460660:three_prime_UTR
TATTGAAGGATGTCATGATA+TGG 0.351822 3_3:-58149182 Msa0460660:CDS
GTGCATTAAAATCCAAATTT+GGG 0.352443 3_3:-58146543 Msa0460660:CDS
AAGTCGCCGAGTGGAGAAAA+AGG 0.354320 3_3:-58146403 Msa0460660:CDS
GTTAGGGCAAAGAATTGATA+TGG 0.359376 3_3:-58148965 Msa0460660:CDS
AAAAGAAGTTGAGTCTCTTA+AGG 0.360820 3_3:-58148611 Msa0460660:CDS
CTTTCTGCGAAAATCGCTTC+CGG 0.369447 3_3:+58146170 None:intergenic
AGAAATTTGGTATGGTGCTC+AGG 0.372218 3_3:-58150501 Msa0460660:CDS
ACATGGGGTGATGCAGATAA+AGG 0.372380 3_3:-58148484 Msa0460660:CDS
AAGTAGTGAACGTTCATCTA+TGG 0.375800 3_3:-58147828 Msa0460660:CDS
GATGTACAAAATGTAGCTTT+AGG 0.379017 3_3:-58149057 Msa0460660:CDS
AAATATTCATGAATTAATAA+AGG 0.383840 3_3:+58145939 None:intergenic
AAGTGCAAAATATGGACAAT+TGG 0.386634 3_3:-58148320 Msa0460660:CDS
CAAGCTGCTACTTGGTTTGT+TGG 0.388672 3_3:-58149987 Msa0460660:CDS
GGATTAATATATGGAGAACT+TGG 0.389967 3_3:+58149315 None:intergenic
AATCAAGTTGTAATGGTTGT+AGG 0.395082 3_3:-58148009 Msa0460660:CDS
TACAACCATTACAACTTGAT+TGG 0.395233 3_3:+58148011 None:intergenic
TGCCTAGTGGAAGGAAGGTT+TGG 0.396709 3_3:-58147658 Msa0460660:CDS
GTGGAATTGGTTGCCTTGTA+GGG 0.403854 3_3:-58149155 Msa0460660:CDS
ACCTCCTACACTAAGAACTA+TGG 0.406995 3_3:+58146034 None:intergenic
GTTCACCATTAGCATAGATC+AGG 0.407340 3_3:+58150265 None:intergenic
AAATTATGAGACACTCTTGT+TGG 0.410796 3_3:+58145889 None:intergenic
GATGGTACATTTGGAGTACT+TGG 0.415173 3_3:-58148664 Msa0460660:CDS
CTGTCCTTTCCGACTTTCTC+CGG 0.415811 3_3:-58150897 Msa0460660:intron
ACGTATGGAGATGGTACATT+TGG 0.418930 3_3:-58148673 Msa0460660:CDS
TTGCAGCTTCACACGATCTC+AGG 0.420713 3_3:-58146703 Msa0460660:intron
AAAGAAGTTGAGTCTCTTAA+GGG 0.422109 3_3:-58148610 Msa0460660:CDS
TTGTTGAGGCTTTAAGAGAT+AGG 0.423592 3_3:-58148108 Msa0460660:CDS
TGTTCAGATTTGGTTGATGA+AGG 0.423770 3_3:-58148817 Msa0460660:CDS
TAGGAGGTGATACTGGCTTC+AGG 0.425135 3_3:-58146019 Msa0460660:three_prime_UTR
ATGGAAGAAGTTTCTTTGGC+TGG 0.428677 3_3:-58151726 Msa0460660:CDS
ATTGGGAAATCCACATGTTA+AGG 0.428801 3_3:-58148302 Msa0460660:CDS
ACCTAAATCTCACACGCTTA+AGG 0.430234 3_3:+58146380 None:intergenic
AGAACATAACATAAGAAAAC+AGG 0.432118 3_3:+58151903 None:intergenic
AGAATGCATTGAAGGTTGAA+TGG 0.433158 3_3:-58146465 Msa0460660:CDS
AAAAGAGGTCATAAAAGCTT+TGG 0.434327 3_3:-58147170 Msa0460660:CDS
TCGTCCCTCTCCAGCATTCA+TGG 0.436141 3_3:-58149357 Msa0460660:CDS
GCGGTGGATTCTAGTAACTT+TGG 0.440816 3_3:+58149087 None:intergenic
GAAGATAGTTCTTCTACGTT+AGG 0.444918 3_3:-58147605 Msa0460660:CDS
ACAAAGCACAAGCTGCTACT+TGG 0.449070 3_3:-58149995 Msa0460660:CDS
TAATCATGGCCTAGAACAAA+AGG 0.451657 3_3:-58146674 Msa0460660:CDS
CCATTCGCCACAAGCAATGC+TGG 0.452990 3_3:+58148732 None:intergenic
GTATCATACATGTGCTTTGA+CGG 0.454992 3_3:-58148875 Msa0460660:CDS
AGTGCAAAATATGGACAATT+GGG 0.455143 3_3:-58148319 Msa0460660:CDS
TGACGCCTCTCAATTTACTA+AGG 0.455387 3_3:-58149832 Msa0460660:intron
CATCCCGTTGGCTTTCATGT+TGG 0.457370 3_3:+58147630 None:intergenic
GAAGTTTACTGCTGGGGTCA+AGG 0.459881 3_3:-58149000 Msa0460660:CDS
TGAGGCTTTAAGAGATAGGC+AGG 0.464989 3_3:-58148104 Msa0460660:CDS
CATATTGCAACTGTGAAACT+TGG 0.467372 3_3:+58148061 None:intergenic
TCAACAAGAGAATGCATTGA+AGG 0.467471 3_3:-58146473 Msa0460660:CDS
CGACTGGTAAGCTGTTTACA+TGG 0.468276 3_3:-58148501 Msa0460660:CDS
AGTGACCAATCAAGTTGTAA+TGG 0.468450 3_3:-58148016 Msa0460660:CDS
TGTTCAACAGCTCTATCAAA+AGG 0.468529 3_3:+58151696 None:intergenic
AAGGGAAGTGTGGAAGGTTA+GGG 0.469125 3_3:-58148981 Msa0460660:CDS
AATGGTTGTAGGTTACCGTT+TGG 0.472951 3_3:-58147998 Msa0460660:CDS
TGTTAAGGACAGAGCGGTTG+TGG 0.475178 3_3:-58148287 Msa0460660:CDS
GGTATGGTGCTCAGGGAAGC+AGG 0.475334 3_3:-58150493 Msa0460660:CDS
CCAGCATTGCTTGTGGCGAA+TGG 0.481761 3_3:-58148732 Msa0460660:CDS
GTCTGTTATGCCATGAATGC+TGG 0.483018 3_3:+58149347 None:intergenic
GGAGAAACAAATGTGACAAA+TGG 0.485329 3_3:-58147722 Msa0460660:CDS
AAAGGTGAAAATGGAGAACT+AGG 0.486261 3_3:-58148166 Msa0460660:CDS
GACAGAGCGGTTGTGGTTGA+AGG 0.488656 3_3:-58148280 Msa0460660:CDS
TGTAGGAAACAATGTATTGA+AGG 0.489219 3_3:-58149196 Msa0460660:CDS
TGGTGAACACTCTCTTGATC+TGG 0.490777 3_3:-58150250 Msa0460660:intron
TTCTTCCTTGTGAAGCCAAA+CGG 0.492985 3_3:+58147983 None:intergenic
AAAGCATCTAAATAATGATA+AGG 0.493227 3_3:-58151856 Msa0460660:five_prime_UTR
AGGCATCATCAGAACATGAT+TGG 0.494229 3_3:-58147764 Msa0460660:CDS
CATGGCCTAGAACAAAAGGC+TGG 0.499113 3_3:-58146670 Msa0460660:CDS
AACAAGGGGAAGTTTACTGC+TGG 0.500374 3_3:-58149008 Msa0460660:CDS
AGTAGTTTAAGAAGCTGCAA+AGG 0.502076 3_3:-58149921 Msa0460660:CDS
ACCAAAATTGTTCAAGGAGA+GGG 0.503781 3_3:-58150444 Msa0460660:CDS
AGAAAGAAGCTGAAAGGTGG+TGG 0.505078 3_3:-58146153 Msa0460660:CDS
AGTTGTGTCAGTAGTCCCTC+TGG 0.507845 3_3:-58149891 Msa0460660:CDS
GACTGGTAAGCTGTTTACAT+GGG 0.509323 3_3:-58148500 Msa0460660:CDS
CTGTTCATATCAGTATGTAT+AGG 0.509933 3_3:+58146619 None:intergenic
GGAGTAACCAAAATTGTTCA+AGG 0.510194 3_3:-58150450 Msa0460660:CDS
CATGGGGTGATGCAGATAAA+GGG 0.510452 3_3:-58148483 Msa0460660:CDS
AGTATTGTACTTAAAGCGTT+CGG 0.511954 3_3:+58148525 None:intergenic
CATTTGGAGTACTTGGACAT+GGG 0.512348 3_3:-58148657 Msa0460660:CDS
AAGTTTACTGCTGGGGTCAA+GGG 0.513656 3_3:-58148999 Msa0460660:CDS
TTTAAGTACAATACTTCGAC+TGG 0.514759 3_3:-58148517 Msa0460660:CDS
TTTCCTACAAGTGCGGAGGC+AGG 0.515452 3_3:+58149210 None:intergenic
ATTGAAGGATGTCATGATAT+GGG 0.515938 3_3:-58149181 Msa0460660:CDS
CATAGATCAGGGAAAATGAA+TGG 0.516523 3_3:+58150277 None:intergenic
GCAATTGTATCTATAAAGAA+AGG 0.522821 3_3:-58150962 Msa0460660:CDS
GACTTTAGCACTTACTAACA+TGG 0.523267 3_3:-58148362 Msa0460660:CDS
GATGTCATGATATGGGGTGG+TGG 0.528574 3_3:-58149174 Msa0460660:CDS
GTTCATTGTTTCACAATAGG+TGG 0.529018 3_3:+58151831 None:intergenic
TGCGGTCGGTTATTCACGTA+TGG 0.530199 3_3:-58148688 Msa0460660:CDS
ACCATAGTTCTTAGTGTAGG+AGG 0.530259 3_3:-58146035 Msa0460660:three_prime_UTR
GGTGATGTCACTGAAGATAG+AGG 0.530760 3_3:-58147743 Msa0460660:CDS
AATCCAACATGAAAGCCAAC+GGG 0.536394 3_3:-58147633 Msa0460660:CDS
GTTCAGATTTGGTTGATGAA+GGG 0.537905 3_3:-58148816 Msa0460660:CDS
GAATGCATTGAAGGTTGAAT+GGG 0.538215 3_3:-58146464 Msa0460660:CDS
AGTGTCTACACGTGGGGCAA+AGG 0.539305 3_3:-58148184 Msa0460660:CDS
GAAAGGCCTTGCTCTTAACC+GGG 0.540072 3_3:+58147885 None:intergenic
GAGACAAAACGAAACCGAAA+AGG 0.541000 3_3:-58150304 Msa0460660:CDS
GGGGTCAAGGGAAGTGTGGA+AGG 0.545751 3_3:-58148987 Msa0460660:CDS
AAGAAGAACATAAGAGACAA+AGG 0.545768 3_3:+58151793 None:intergenic
ATCTGTTTATTTCACTTCGT+AGG 0.548050 3_3:+58152030 None:intergenic
CAACAAAACAAGGTGTGTAT+CGG 0.548162 3_3:+58148125 None:intergenic
GATGCAGATAAAGGGAGGCT+TGG 0.550249 3_3:-58148475 Msa0460660:CDS
AACTATCTTCTACATCCCGT+TGG 0.551149 3_3:+58147618 None:intergenic
TAAGTGCAAAGCAGCAAAAG+AGG 0.553351 3_3:-58147185 Msa0460660:CDS
ACAAGGGGAAGTTTACTGCT+GGG 0.557125 3_3:-58149007 Msa0460660:CDS
CTTAAAGCCTCAACAAAACA+AGG 0.557225 3_3:+58148115 None:intergenic
CGGTTATTCACGTATGGAGA+TGG 0.557288 3_3:-58148682 Msa0460660:CDS
GAAAATGGAGAACTAGGGCT+AGG 0.557337 3_3:-58148160 Msa0460660:CDS
GAGTTGGTCTGTTGCCAAAG+AGG 0.558617 3_3:-58147215 Msa0460660:CDS
CTCTTAAGGGTCTATGTGTG+AGG 0.559626 3_3:-58148597 Msa0460660:CDS
GAGACAAAGGAAACAGAAGA+AGG 0.561840 3_3:+58151806 None:intergenic
GGTCTGTTGCTTGTGGAACA+TGG 0.562093 3_3:-58148576 Msa0460660:CDS
GTTCAACAGCTCTATCAAAA+GGG 0.563668 3_3:+58151697 None:intergenic
GAAATACTAATACCTTCGAC+AGG 0.566833 3_3:+58148754 None:intergenic
GGTTAGACAGAGTGTAAGAG+TGG 0.571521 3_3:+58151924 None:intergenic
TTCACCATAGTTCTTAGTGT+AGG 0.572217 3_3:-58146038 Msa0460660:three_prime_UTR
TTTCATTCACAATCCCTACA+AGG 0.572274 3_3:+58149142 None:intergenic
AGAAAACTGCTAGAGATGAA+TGG 0.573070 3_3:+58146060 None:intergenic
TGCTGGGGTCAAGGGAAGTG+TGG 0.574844 3_3:-58148991 Msa0460660:CDS
ATCTCAGGAAAAGATAATCA+TGG 0.574994 3_3:-58146688 Msa0460660:CDS
TTTGAATGCATCTCTAGCCC+CGG 0.576039 3_3:-58147903 Msa0460660:CDS
TCTAGCCCCGGTTAAGAGCA+AGG 0.579188 3_3:-58147891 Msa0460660:CDS
ATAAATATGAAATTGAAACT+AGG 0.580980 3_3:-58146105 Msa0460660:CDS
TTGTAGGGATTGTGAATGAA+AGG 0.581089 3_3:-58149140 Msa0460660:CDS
GAAAAGCATTTGCGATTGAG+CGG 0.582270 3_3:-58150471 Msa0460660:CDS
AAACATGCCTAGTGGAAGGA+AGG 0.587377 3_3:-58147663 Msa0460660:CDS
TGTGTGAGGTCTGTTGCTTG+TGG 0.587780 3_3:-58148583 Msa0460660:CDS
GTACAAAATGTAGCTTTAGG+AGG 0.588904 3_3:-58149054 Msa0460660:CDS
ACTTTAGCACTTACTAACAT+GGG 0.592010 3_3:-58148361 Msa0460660:CDS
AACCAAAATTGTTCAAGGAG+AGG 0.593734 3_3:-58150445 Msa0460660:CDS
AAACTTTCATTACCTGTCGA+AGG 0.594396 3_3:-58148766 Msa0460660:CDS
CGCAGAAAGAAGCTGAAAGG+TGG 0.594712 3_3:-58146156 Msa0460660:CDS
GAAATTTGGTATGGTGCTCA+GGG 0.595030 3_3:-58150500 Msa0460660:CDS
GGTTACCGTTTGGCTTCACA+AGG 0.595319 3_3:-58147988 Msa0460660:CDS
ACCGCTCTGTCCTTAACATG+TGG 0.596192 3_3:+58148292 None:intergenic
TGGGTTGAACAATATGAGAA+TGG 0.597216 3_3:-58146445 Msa0460660:CDS
ACATTTGGAGTACTTGGACA+TGG 0.598135 3_3:-58148658 Msa0460660:CDS
AAACATAACTGTTATAATTG+CGG 0.598861 3_3:-58147962 Msa0460660:CDS
AGTATTTCCAGCATTGCTTG+TGG 0.599346 3_3:-58148739 Msa0460660:CDS
GCAACAATCAGCAGATACAA+AGG 0.599766 3_3:-58147784 Msa0460660:CDS
AAATCCAACATGAAAGCCAA+CGG 0.601688 3_3:-58147634 Msa0460660:CDS
CTTCAGGGAGTGTCTACACG+TGG 0.602762 3_3:-58148192 Msa0460660:CDS
TTTCGCAGAAAGAAGCTGAA+AGG 0.602996 3_3:-58146159 Msa0460660:CDS
AGGATGAGAGAAATTTGGTA+TGG 0.603318 3_3:-58150509 Msa0460660:CDS
GTTTCGTAACTATTGCAGCA+TGG 0.606958 3_3:+58149028 None:intergenic
CAATCGTCTCTAGTTGCGGT+CGG 0.608233 3_3:-58148702 Msa0460660:CDS
ATGGCCTAGAACAAAAGGCT+GGG 0.609614 3_3:-58146669 Msa0460660:CDS
CAGTCCAAGAAATGCCAACA+CGG 0.611267 3_3:-58146599 Msa0460660:CDS
AAGGGAGAATTAGAAGTCAG+TGG 0.614649 3_3:-58148798 Msa0460660:CDS
GATTAATATATGGAGAACTT+GGG 0.614830 3_3:+58149316 None:intergenic
GCTGCAATAGTTACGAAACA+AGG 0.615016 3_3:-58149024 Msa0460660:CDS
AATTCAGAGGCTGAGAGCTG+AGG 0.616361 3_3:-58147459 Msa0460660:intron
TACATTGTTTCCTACAAGTG+CGG 0.616407 3_3:+58149203 None:intergenic
TCCGGTGACGTATACACGTG+GGG 0.618700 3_3:-58148850 Msa0460660:CDS
TTCACCATTAGCATAGATCA+GGG 0.621382 3_3:+58150266 None:intergenic
CAACAGCTCTATCAAAAGGG+AGG 0.622966 3_3:+58151700 None:intergenic
TGAAACCTTAGTAAATTGAG+AGG 0.624478 3_3:+58149827 None:intergenic
CTACTTTGTCACTTTCAGAA+CGG 0.625954 3_3:-58149428 Msa0460660:CDS
TTGTACATCTAACATTGCGG+TGG 0.627868 3_3:+58149071 None:intergenic
CTTTCGGCGTAAAATTCCAG+AGG 0.627920 3_3:+58149875 None:intergenic
ACTGCAATCGTCTCTAGTTG+CGG 0.628229 3_3:-58148706 Msa0460660:CDS
AACAGCTCTATCAAAAGGGA+GGG 0.628571 3_3:+58151701 None:intergenic
TGCACTAGAGAATATTATAG+GGG 0.629752 3_3:+58146561 None:intergenic
TTCCAAACCTTCCTTCCACT+AGG 0.631197 3_3:+58147656 None:intergenic
GAAAGAAGCTGAAAGGTGGT+GGG 0.632332 3_3:-58146152 Msa0460660:CDS
CTGCAATAGTTACGAAACAA+GGG 0.632740 3_3:-58149023 Msa0460660:CDS
ATTCGATAGACTGTCCGTGT+TGG 0.633618 3_3:+58146585 None:intergenic
CGTTCTGAAAGTGACAAAGT+AGG 0.636813 3_3:+58149429 None:intergenic
TGCTCATAGAAGAAATTCAG+AGG 0.638961 3_3:-58147472 Msa0460660:CDS
ACAAAGGAAACAGAAGAAGG+AGG 0.640909 3_3:+58151809 None:intergenic
TTCAGGGAGTGTCTACACGT+GGG 0.641981 3_3:-58148191 Msa0460660:CDS
TGCTTGTGGAACATGGCATA+CGG 0.642519 3_3:-58148569 Msa0460660:CDS
CCTACAAGTGCGGAGGCAGG+AGG 0.643913 3_3:+58149213 None:intergenic
GCACGATTCACAAACACGAA+AGG 0.644210 3_3:+58147868 None:intergenic
AACTAACAAAGAAATGACAA+TGG 0.644649 3_3:-58151745 Msa0460660:exon
CAAGGGGAAGTTTACTGCTG+GGG 0.645789 3_3:-58149006 Msa0460660:CDS
GGTGCATATTTACTCAAGTG+TGG 0.646815 3_3:-58150941 Msa0460660:CDS
TTGAAGGATGTCATGATATG+GGG 0.647516 3_3:-58149180 Msa0460660:CDS
ATTGTTTCCTACAAGTGCGG+AGG 0.647539 3_3:+58149206 None:intergenic
CAGGTAGATACAATAACATG+TGG 0.648865 3_3:-58148085 Msa0460660:CDS
TTTCGGCGTAAAATTCCAGA+GGG 0.649198 3_3:+58149876 None:intergenic
AAGGTGAAAATGGAGAACTA+GGG 0.650264 3_3:-58148165 Msa0460660:CDS
TTACTCAAGTGTGGTAACAG+AGG 0.652482 3_3:-58150932 Msa0460660:CDS
TTATGCCATGAATGCTGGAG+AGG 0.653342 3_3:+58149352 None:intergenic
TCATGCATACCGGAGAAAGT+CGG 0.658136 3_3:+58150888 None:intergenic
TATGTTAAAATGATATCTTG+TGG 0.658877 3_3:-58148241 Msa0460660:CDS
TCAGGGAGTGTCTACACGTG+GGG 0.659297 3_3:-58148190 Msa0460660:CDS
TTCCGGTGACGTATACACGT+GGG 0.663644 3_3:-58148851 Msa0460660:CDS
TATGCCATGAATGCTGGAGA+GGG 0.664043 3_3:+58149353 None:intergenic
ACTGGTAAGCTGTTTACATG+GGG 0.666773 3_3:-58148499 Msa0460660:CDS
AAGGATGTCATGATATGGGG+TGG 0.667227 3_3:-58149177 Msa0460660:CDS
ATTCCGGTGACGTATACACG+TGG 0.676244 3_3:-58148852 Msa0460660:CDS
CATACCGGAGAAAGTCGGAA+AGG 0.680831 3_3:+58150893 None:intergenic
CCGGTGACGTATACACGTGG+GGG 0.688553 3_3:-58148849 Msa0460660:CDS
TGCAATAGTTACGAAACAAG+GGG 0.689422 3_3:-58149022 Msa0460660:CDS
GGGGTGATGCAGATAAAGGG+AGG 0.694491 3_3:-58148480 Msa0460660:CDS
AGTGTGATACAATGTGGACA+AGG 0.698706 3_3:-58147581 Msa0460660:CDS
ACATTGACAAAGTCGCCGAG+TGG 0.699185 3_3:-58146412 Msa0460660:CDS
AAAGGCCTTGCTCTTAACCG+GGG 0.699682 3_3:+58147886 None:intergenic
ACAAGCTGTGAAACACATGT+CGG 0.712695 3_3:+58148424 None:intergenic
TCCACATGTTAAGGACAGAG+CGG 0.719995 3_3:-58148293 Msa0460660:CDS
TTAGGTAGTGTGATACAATG+TGG 0.720681 3_3:-58147587 Msa0460660:CDS
GTTTGACTAAGAGACAACAG+AGG 0.813602 3_3:+58147698 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTAAAAAAATATGAAATTT+GGG + chr3_3:58146420-58146439 None:intergenic 10.0%
!! AGTTAAAAAAATATGAAATT+TGG + chr3_3:58146421-58146440 None:intergenic 10.0%
!!! TTTTTTTAACTGTATTTTTA+TGG - chr3_3:58146430-58146449 Msa0460660:CDS 10.0%
!! ATTTAACAATGAAATTTAAA+AGG + chr3_3:58147134-58147153 None:intergenic 10.0%
!! TTTAAATTTCATTGTTAAAT+AGG - chr3_3:58147134-58147153 Msa0460660:intron 10.0%
!!! GATTTTAATTTCTTATATAT+TGG - chr3_3:58147253-58147272 Msa0460660:CDS 10.0%
!!! TTTTTTTTCATGTTATATAA+TGG - chr3_3:58147373-58147392 Msa0460660:intron 10.0%
!!! AAAGTTTGAAAAATAATTTT+TGG - chr3_3:58147579-58147598 Msa0460660:CDS 10.0%
!!! TTTACTATTATTTTTGTTTT+AGG - chr3_3:58151111-58151130 Msa0460660:intron 10.0%
!! AAATATTCATGAATTAATAA+AGG + chr3_3:58152009-58152028 None:intergenic 10.0%
!!! TTATTAATTCATGAATATTT+TGG - chr3_3:58152009-58152028 Msa0460660:five_prime_UTR 10.0%
!!! TATTAATTCATGAATATTTT+GGG - chr3_3:58152010-58152029 Msa0460660:five_prime_UTR 10.0%
!!! TCTAATTTTCTACAAATTAA+AGG + chr3_3:58147323-58147342 None:intergenic 15.0%
!!! AATTTTTGGTCTAATAATTA+CGG - chr3_3:58147593-58147612 Msa0460660:CDS 15.0%
!! ATATCTATAATCAAAGTAAA+CGG + chr3_3:58147924-58147943 None:intergenic 15.0%
!!! TTCTTTTATAGATTAAAAGT+AGG + chr3_3:58148413-58148432 None:intergenic 15.0%
!!! TTAAGTTGTTTAATGAAATA+GGG + chr3_3:58150849-58150868 None:intergenic 15.0%
!!! ATTAAGTTGTTTAATGAAAT+AGG + chr3_3:58150850-58150869 None:intergenic 15.0%
!!! TTTCGTGTTTATATATTTTT+TGG - chr3_3:58151749-58151768 Msa0460660:exon 15.0%
!! ATAAATATGAAATTGAAACT+AGG - chr3_3:58151840-58151859 Msa0460660:five_prime_UTR 15.0%
!!! AAAGCATCTAAATAATGATA+AGG - chr3_3:58146089-58146108 Msa0460660:exon 20.0%
!! AGAAAATTGGTATGAAAAAT+AGG + chr3_3:58146309-58146328 None:intergenic 20.0%
!!! TTGAAACATTTTGAAAATCA+TGG - chr3_3:58146350-58146369 Msa0460660:intron 20.0%
!!! TGATTTTCTCAAATTCTTAA+CGG - chr3_3:58146621-58146640 Msa0460660:CDS 20.0%
!!! AGTGCTGAAAAATTAAATAT+GGG + chr3_3:58146799-58146818 None:intergenic 20.0%
!!! TAGTGCTGAAAAATTAAATA+TGG + chr3_3:58146800-58146819 None:intergenic 20.0%
!!! AAATTTAAAAGGCAAGATTT+TGG + chr3_3:58147123-58147142 None:intergenic 20.0%
!! ATATGAAAGAAAAATCCAAT+TGG - chr3_3:58147225-58147244 Msa0460660:CDS 20.0%
!!! TTTCAAACTTTAGAATCATA+TGG + chr3_3:58147570-58147589 None:intergenic 20.0%
!! TATCTATAATCAAAGTAAAC+GGG + chr3_3:58147923-58147942 None:intergenic 20.0%
!!! ATTTTACAGCAAAATCAAAT+CGG - chr3_3:58148298-58148317 Msa0460660:CDS 20.0%
!!! AATTCTCTTCTTTTTTTTCT+TGG - chr3_3:58148368-58148387 Msa0460660:CDS 20.0%
!!! CATTTATGTCATTATTTTGA+AGG - chr3_3:58148473-58148492 Msa0460660:CDS 20.0%
!!! TAAATCTGACTTTTATTCAT+CGG - chr3_3:58148563-58148582 Msa0460660:CDS 20.0%
!! TGAATATCTGGATTAATATA+TGG + chr3_3:58148642-58148661 None:intergenic 20.0%
!! TTTATATTGCTATGAATATC+TGG + chr3_3:58148654-58148673 None:intergenic 20.0%
!! TATGTTAAAATGATATCTTG+TGG - chr3_3:58149704-58149723 Msa0460660:intron 20.0%
!! AAACATAACTGTTATAATTG+CGG - chr3_3:58149983-58150002 Msa0460660:CDS 20.0%
!! AATGAAATTTCAACTAGAAA+GGG + chr3_3:58150579-58150598 None:intergenic 20.0%
!! AAATGAAATTTCAACTAGAA+AGG + chr3_3:58150580-58150599 None:intergenic 20.0%
!!! ATTTTTTTTGACTACGATTA+AGG + chr3_3:58151668-58151687 None:intergenic 20.0%
! GCATTTGTTTATTAAGGATT+TGG + chr3_3:58145974-58145993 None:intergenic 25.0%
! ATGGTTGCATTTGTTTATTA+AGG + chr3_3:58145980-58145999 None:intergenic 25.0%
! TAAACAAATGCAACCATAAA+AGG - chr3_3:58145983-58146002 Msa0460660:three_prime_UTR 25.0%
! AGAACATAACATAAGAAAAC+AGG + chr3_3:58146045-58146064 None:intergenic 25.0%
!! TCATTTCTTTGTTAGTTTGA+TGG + chr3_3:58146197-58146216 None:intergenic 25.0%
! AACTAACAAAGAAATGACAA+TGG - chr3_3:58146200-58146219 Msa0460660:intron 25.0%
! GTGAAGAAGAAAAAGAAAAT+TGG + chr3_3:58146322-58146341 None:intergenic 25.0%
! TCAAAATGTTTCAAGAGAAA+AGG + chr3_3:58146344-58146363 None:intergenic 25.0%
! AATATGAAATTTGGGAAACA+AGG + chr3_3:58146412-58146431 None:intergenic 25.0%
! AAACAAACATTTAGTCACAT+TGG + chr3_3:58146915-58146934 None:intergenic 25.0%
! GCAATTGTATCTATAAAGAA+AGG - chr3_3:58146983-58147002 Msa0460660:intron 25.0%
!! AGACTAAGAAATTTGATAAC+AGG + chr3_3:58147098-58147117 None:intergenic 25.0%
! TTCTTTCATATGACAAGAAT+CGG + chr3_3:58147216-58147235 None:intergenic 25.0%
! AATTAAAATCCAAGACCAAT+TGG + chr3_3:58147243-58147262 None:intergenic 25.0%
! TTCATGTTATATAATGGTGA+AGG - chr3_3:58147379-58147398 Msa0460660:intron 25.0%
! ATCTATAATCAAAGTAAACG+GGG + chr3_3:58147922-58147941 None:intergenic 25.0%
!! CTTAAACTACTAAAAGCTTT+TGG + chr3_3:58148015-58148034 None:intergenic 25.0%
!! ACTTTTATGATAAACGTTCT+TGG - chr3_3:58148202-58148221 Msa0460660:CDS 25.0%
!! CTTTTATGATAAACGTTCTT+GGG - chr3_3:58148203-58148222 Msa0460660:CDS 25.0%
! GATTAATATATGGAGAACTT+GGG + chr3_3:58148632-58148651 None:intergenic 25.0%
!! ATTTTGTACATCTAACATTG+CGG + chr3_3:58148880-58148899 None:intergenic 25.0%
!! TAAGAGAATCAACTATTTTC+GGG + chr3_3:58149016-58149035 None:intergenic 25.0%
!! CTAAGAGAATCAACTATTTT+CGG + chr3_3:58149017-58149036 None:intergenic 25.0%
! ATTCTAAATTGTGCTGAATA+TGG + chr3_3:58150397-58150416 None:intergenic 25.0%
!! GTTGTTGTCATTTATCTTTA+AGG - chr3_3:58150823-58150842 Msa0460660:intron 25.0%
! TTAAATACGACAATCCAAAT+AGG - chr3_3:58151007-58151026 Msa0460660:intron 25.0%
! GTAGCGTAATCATTATAATT+TGG - chr3_3:58151184-58151203 Msa0460660:intron 25.0%
! ACAAGAATTTCTTCCAAATT+TGG - chr3_3:58151301-58151320 Msa0460660:intron 25.0%
! ATGCACTAGAGAATATTATA+GGG + chr3_3:58151388-58151407 None:intergenic 25.0%
! AATGCACTAGAGAATATTAT+AGG + chr3_3:58151389-58151408 None:intergenic 25.0%
! AGTGCATTAAAATCCAAATT+TGG - chr3_3:58151401-58151420 Msa0460660:intron 25.0%
! GTGCATTAAAATCCAAATTT+GGG - chr3_3:58151402-58151421 Msa0460660:intron 25.0%
!!! GAGAAGTATTCTTCTTAAAA+AGG - chr3_3:58151424-58151443 Msa0460660:intron 25.0%
!!! GCTAACTAATACTACTTTTA+TGG - chr3_3:58151623-58151642 Msa0460660:intron 25.0%
!!! TTTATATATTTTTTGGCAGC+CGG - chr3_3:58151756-58151775 Msa0460660:five_prime_UTR 25.0%
ATCTGTTTATTTCACTTCGT+AGG + chr3_3:58145918-58145937 None:intergenic 30.0%
AAGAAGAACATAAGAGACAA+AGG + chr3_3:58146155-58146174 None:intergenic 30.0%
AAGTGTTACCTTCAAAATTC+TGG + chr3_3:58146524-58146543 None:intergenic 30.0%
!! AGAATTTTGAAGGTAACACT+TGG - chr3_3:58146523-58146542 Msa0460660:CDS 30.0%
!! GAATTTTGAAGGTAACACTT+GGG - chr3_3:58146524-58146543 Msa0460660:CDS 30.0%
TTCAGTCTAACTATATGTGT+CGG + chr3_3:58146596-58146615 None:intergenic 30.0%
TATCAATGATTCATAGCACT+TGG - chr3_3:58146682-58146701 Msa0460660:CDS 30.0%
ATCAATGATTCATAGCACTT+GGG - chr3_3:58146683-58146702 Msa0460660:CDS 30.0%
!! AATTTTTCAGATTCTCTAGG+AGG + chr3_3:58146944-58146963 None:intergenic 30.0%
TCCTAGAGAATCTGAAAAAT+TGG - chr3_3:58146943-58146962 Msa0460660:intron 30.0%
!! ACCAATTTTTCAGATTCTCT+AGG + chr3_3:58146947-58146966 None:intergenic 30.0%
!!! ATTGGTTTGTTTTGTTGTTC+AGG - chr3_3:58146961-58146980 Msa0460660:intron 30.0%
! TTGTTAAATAGGCATTGTAC+TGG - chr3_3:58147145-58147164 Msa0460660:intron 30.0%
! AAGAAAAATCCAATTGGTCT+TGG - chr3_3:58147231-58147250 Msa0460660:CDS 30.0%
! TATCTAGGATGAGAGAAATT+TGG - chr3_3:58147431-58147450 Msa0460660:intron 30.0%
GATTTGAACTTTGTACTTTG+AGG - chr3_3:58147801-58147820 Msa0460660:CDS 30.0%
! TATATGACAAAGAGTACATG+AGG + chr3_3:58147860-58147879 None:intergenic 30.0%
CTCTTTGTCATATACATTTG+AGG - chr3_3:58147866-58147885 Msa0460660:CDS 30.0%
! GAAGACCAAGATTTTTCTTT+CGG + chr3_3:58148089-58148108 None:intergenic 30.0%
TGAAACCTTAGTAAATTGAG+AGG + chr3_3:58148121-58148140 None:intergenic 30.0%
GGATTAATATATGGAGAACT+TGG + chr3_3:58148633-58148652 None:intergenic 30.0%
! TTTCGAAAAAGAGTACAAGA+AGG - chr3_3:58148683-58148702 Msa0460660:CDS 30.0%
TGTAGGAAACAATGTATTGA+AGG - chr3_3:58148749-58148768 Msa0460660:CDS 30.0%
TATTGAAGGATGTCATGATA+TGG - chr3_3:58148763-58148782 Msa0460660:CDS 30.0%
ATTGAAGGATGTCATGATAT+GGG - chr3_3:58148764-58148783 Msa0460660:CDS 30.0%
GATGTACAAAATGTAGCTTT+AGG - chr3_3:58148888-58148907 Msa0460660:CDS 30.0%
! AAGAGAATCAACTATTTTCG+GGG + chr3_3:58149015-58149034 None:intergenic 30.0%
! TTAAGAGACTCAACTTCTTT+TGG + chr3_3:58149335-58149354 None:intergenic 30.0%
AAAAGAAGTTGAGTCTCTTA+AGG - chr3_3:58149334-58149353 Msa0460660:CDS 30.0%
AAAGAAGTTGAGTCTCTTAA+GGG - chr3_3:58149335-58149354 Msa0460660:CDS 30.0%
! AGTATTGTACTTAAAGCGTT+CGG + chr3_3:58149423-58149442 None:intergenic 30.0%
TTTAAGTACAATACTTCGAC+TGG - chr3_3:58149428-58149447 Msa0460660:CDS 30.0%
! GATTTTGTTCAAGTATCTTG+TGG - chr3_3:58149551-58149570 Msa0460660:intron 30.0%
ACTTTAGCACTTACTAACAT+GGG - chr3_3:58149584-58149603 Msa0460660:intron 30.0%
! ATGGGAAAAGTTTTTGCAAT+GGG - chr3_3:58149602-58149621 Msa0460660:intron 30.0%
AAGTGCAAAATATGGACAAT+TGG - chr3_3:58149625-58149644 Msa0460660:intron 30.0%
AGTGCAAAATATGGACAATT+GGG - chr3_3:58149626-58149645 Msa0460660:intron 30.0%
! GATTGGTCACTAATTGAAAT+AGG + chr3_3:58149920-58149939 None:intergenic 30.0%
TACAACCATTACAACTTGAT+TGG + chr3_3:58149937-58149956 None:intergenic 30.0%
! AATCAAGTTGTAATGGTTGT+AGG - chr3_3:58149936-58149955 Msa0460660:CDS 30.0%
TTCTTCTATGAGCAACTTAT+CGG + chr3_3:58150467-58150486 None:intergenic 30.0%
TCCAAAGTAATGAAATGACA+TGG + chr3_3:58150636-58150655 None:intergenic 30.0%
GTCATTTCATTACTTTGGAT+AGG - chr3_3:58150637-58150656 Msa0460660:intron 30.0%
AAAAGAGGTCATAAAAGCTT+TGG - chr3_3:58150775-58150794 Msa0460660:intron 30.0%
! TCATAAAAGCTTTGGCATTA+AGG - chr3_3:58150783-58150802 Msa0460660:intron 30.0%
! CATAAAAGCTTTGGCATTAA+GGG - chr3_3:58150784-58150803 Msa0460660:intron 30.0%
TGTTTATGTATAAGCTATCC+TGG - chr3_3:58150899-58150918 Msa0460660:CDS 30.0%
TCATGGAAATCAACTGTTTA+TGG - chr3_3:58151047-58151066 Msa0460660:intron 30.0%
CATGGAAATCAACTGTTTAT+GGG - chr3_3:58151048-58151067 Msa0460660:intron 30.0%
ATCTCAGGAAAAGATAATCA+TGG - chr3_3:58151257-58151276 Msa0460660:intron 30.0%
CTGTTCATATCAGTATGTAT+AGG + chr3_3:58151329-58151348 None:intergenic 30.0%
TGCACTAGAGAATATTATAG+GGG + chr3_3:58151387-58151406 None:intergenic 30.0%
AAGAATACTTCTCCCAAATT+TGG + chr3_3:58151417-58151436 None:intergenic 30.0%
TGACTACGATTAAGGAAATT+AGG + chr3_3:58151660-58151679 None:intergenic 30.0%
AATACTGCATCTTAATTTCG+TGG - chr3_3:58151703-58151722 Msa0460660:CDS 30.0%
AAATTATGAGACACTCTTGT+TGG + chr3_3:58152059-58152078 None:intergenic 30.0%
! GTTCTCTTCTCTTCCTTTTA+TGG + chr3_3:58145999-58146018 None:intergenic 35.0%
GTTCATTGTTTCACAATAGG+TGG + chr3_3:58146117-58146136 None:intergenic 35.0%
GAGGTTCATTGTTTCACAAT+AGG + chr3_3:58146120-58146139 None:intergenic 35.0%
GACAATGGAAGAAGTTTCTT+TGG - chr3_3:58146215-58146234 Msa0460660:intron 35.0%
GTTCAACAGCTCTATCAAAA+GGG + chr3_3:58146251-58146270 None:intergenic 35.0%
TGTTCAACAGCTCTATCAAA+AGG + chr3_3:58146252-58146271 None:intergenic 35.0%
! TTTTGATAGAGCTGTTGAAC+AGG - chr3_3:58146251-58146270 Msa0460660:intron 35.0%
ATAGTTTATGCACATTGCAC+AGG + chr3_3:58146490-58146509 None:intergenic 35.0%
! ATGTGAGTCCAGAATTTTGA+AGG - chr3_3:58146513-58146532 Msa0460660:CDS 35.0%
TCTCAAATTCTTAACGGTGT+CGG - chr3_3:58146627-58146646 Msa0460660:CDS 35.0%
TGAATCATTGATACAGACAC+CGG + chr3_3:58146675-58146694 None:intergenic 35.0%
TTCATCTCATTCATGCATAC+CGG + chr3_3:58147070-58147089 None:intergenic 35.0%
! TAATGTATATCCTTTTCCCC+TGG - chr3_3:58147405-58147424 Msa0460660:intron 35.0%
TCTCATCCTAGATATAACCA+GGG + chr3_3:58147425-58147444 None:intergenic 35.0%
AGGATGAGAGAAATTTGGTA+TGG - chr3_3:58147436-58147455 Msa0460660:intron 35.0%
GGAGTAACCAAAATTGTTCA+AGG - chr3_3:58147495-58147514 Msa0460660:CDS 35.0%
AACCAAAATTGTTCAAGGAG+AGG - chr3_3:58147500-58147519 Msa0460660:CDS 35.0%
ACCAAAATTGTTCAAGGAGA+GGG - chr3_3:58147501-58147520 Msa0460660:CDS 35.0%
! TCTGAGACCTTATCTGAAAA+TGG + chr3_3:58147623-58147642 None:intergenic 35.0%
! AAATGAATGGCACTCCTTTT+CGG + chr3_3:58147658-58147677 None:intergenic 35.0%
CATAGATCAGGGAAAATGAA+TGG + chr3_3:58147671-58147690 None:intergenic 35.0%
! TTTTCCCTGATCTATGCTAA+TGG - chr3_3:58147675-58147694 Msa0460660:CDS 35.0%
TTCACCATTAGCATAGATCA+GGG + chr3_3:58147682-58147701 None:intergenic 35.0%
GATTGAAAGCTGTGATTTCT+AGG - chr3_3:58147980-58147999 Msa0460660:CDS 35.0%
!! TACTAAAAGCTTTTGGTTGC+TGG + chr3_3:58148008-58148027 None:intergenic 35.0%
AGTAGTTTAAGAAGCTGCAA+AGG - chr3_3:58148024-58148043 Msa0460660:CDS 35.0%
TTACGCCGAAAGAAAAATCT+TGG - chr3_3:58148081-58148100 Msa0460660:CDS 35.0%
!! CTACTTTGTCACTTTCAGAA+CGG - chr3_3:58148517-58148536 Msa0460660:CDS 35.0%
TACATTGTTTCCTACAAGTG+CGG + chr3_3:58148745-58148764 None:intergenic 35.0%
TTGAAGGATGTCATGATATG+GGG - chr3_3:58148765-58148784 Msa0460660:CDS 35.0%
TTTCATTCACAATCCCTACA+AGG + chr3_3:58148806-58148825 None:intergenic 35.0%
TTGTAGGGATTGTGAATGAA+AGG - chr3_3:58148805-58148824 Msa0460660:CDS 35.0%
!! GTACAAAATGTAGCTTTAGG+AGG - chr3_3:58148891-58148910 Msa0460660:CDS 35.0%
CTGCAATAGTTACGAAACAA+GGG - chr3_3:58148922-58148941 Msa0460660:CDS 35.0%
TGCAATAGTTACGAAACAAG+GGG - chr3_3:58148923-58148942 Msa0460660:CDS 35.0%
GTTAGGGCAAAGAATTGATA+TGG - chr3_3:58148980-58148999 Msa0460660:CDS 35.0%
CGTGTAAAAAAAGTTGCTTG+TGG - chr3_3:58149044-58149063 Msa0460660:CDS 35.0%
GTATCATACATGTGCTTTGA+CGG - chr3_3:58149070-58149089 Msa0460660:CDS 35.0%
GAAAGACTCTTGTTCAGATT+TGG - chr3_3:58149118-58149137 Msa0460660:CDS 35.0%
!! TGTTCAGATTTGGTTGATGA+AGG - chr3_3:58149128-58149147 Msa0460660:CDS 35.0%
!! GTTCAGATTTGGTTGATGAA+GGG - chr3_3:58149129-58149148 Msa0460660:CDS 35.0%
AAACTTTCATTACCTGTCGA+AGG - chr3_3:58149179-58149198 Msa0460660:CDS 35.0%
GAAATACTAATACCTTCGAC+AGG + chr3_3:58149194-58149213 None:intergenic 35.0%
GACTTTAGCACTTACTAACA+TGG - chr3_3:58149583-58149602 Msa0460660:intron 35.0%
! CATGGGAAAAGTTTTTGCAA+TGG - chr3_3:58149601-58149620 Msa0460660:intron 35.0%
ATTGGGAAATCCACATGTTA+AGG - chr3_3:58149643-58149662 Msa0460660:intron 35.0%
!!! TTGCTGTTTTGACATCTTCA+GGG - chr3_3:58149738-58149757 Msa0460660:intron 35.0%
AAAGGTGAAAATGGAGAACT+AGG - chr3_3:58149779-58149798 Msa0460660:intron 35.0%
AAGGTGAAAATGGAGAACTA+GGG - chr3_3:58149780-58149799 Msa0460660:intron 35.0%
CAACAAAACAAGGTGTGTAT+CGG + chr3_3:58149823-58149842 None:intergenic 35.0%
!!! ATACACACCTTGTTTTGTTG+AGG - chr3_3:58149823-58149842 Msa0460660:intron 35.0%
CTTAAAGCCTCAACAAAACA+AGG + chr3_3:58149833-58149852 None:intergenic 35.0%
!! TTGTTGAGGCTTTAAGAGAT+AGG - chr3_3:58149837-58149856 Msa0460660:CDS 35.0%
CATATTGCAACTGTGAAACT+TGG + chr3_3:58149887-58149906 None:intergenic 35.0%
! AGTGACCAATCAAGTTGTAA+TGG - chr3_3:58149929-58149948 Msa0460660:CDS 35.0%
!!! CTTTTTTGCTACTACAACTG+CGG + chr3_3:58150021-58150040 None:intergenic 35.0%
TCGTGCTTCAATAAAAAGCA+AGG - chr3_3:58150094-58150113 Msa0460660:intron 35.0%
AAGTAGTGAACGTTCATCTA+TGG - chr3_3:58150117-58150136 Msa0460660:intron 35.0%
GGAGAAACAAATGTGACAAA+TGG - chr3_3:58150223-58150242 Msa0460660:intron 35.0%
AAATCCAACATGAAAGCCAA+CGG - chr3_3:58150311-58150330 Msa0460660:CDS 35.0%
GAAGATAGTTCTTCTACGTT+AGG - chr3_3:58150340-58150359 Msa0460660:intron 35.0%
TTAGGTAGTGTGATACAATG+TGG - chr3_3:58150358-58150377 Msa0460660:intron 35.0%
TGCTCATAGAAGAAATTCAG+AGG - chr3_3:58150473-58150492 Msa0460660:CDS 35.0%
AAACAATTTGTGCCTGAAAG+TGG + chr3_3:58150520-58150539 None:intergenic 35.0%
ATTTCAACTAGAAAGGGAAC+AGG + chr3_3:58150573-58150592 None:intergenic 35.0%
! GCCATGTCATTTCATTACTT+TGG - chr3_3:58150632-58150651 Msa0460660:intron 35.0%
TTTAGGCCTCAAAGTCATAT+TGG - chr3_3:58151128-58151147 Msa0460660:intron 35.0%
TTAGGCCTCAAAGTCATATT+GGG - chr3_3:58151129-58151148 Msa0460660:intron 35.0%
TAATCATGGCCTAGAACAAA+AGG - chr3_3:58151271-58151290 Msa0460660:intron 35.0%
GTATGTATAGGTGCCAAATT+TGG + chr3_3:58151317-58151336 None:intergenic 35.0%
TCAACAAGAGAATGCATTGA+AGG - chr3_3:58151472-58151491 Msa0460660:intron 35.0%
AGAATGCATTGAAGGTTGAA+TGG - chr3_3:58151480-58151499 Msa0460660:intron 35.0%
GAATGCATTGAAGGTTGAAT+GGG - chr3_3:58151481-58151500 Msa0460660:intron 35.0%
! TGGGTTGAACAATATGAGAA+TGG - chr3_3:58151500-58151519 Msa0460660:intron 35.0%
AGAAAACTGCTAGAGATGAA+TGG + chr3_3:58151888-58151907 None:intergenic 35.0%
TTCACCATAGTTCTTAGTGT+AGG - chr3_3:58151907-58151926 Msa0460660:five_prime_UTR 35.0%
ACAAAGGAAACAGAAGAAGG+AGG + chr3_3:58146139-58146158 None:intergenic 40.0%
GAGACAAAGGAAACAGAAGA+AGG + chr3_3:58146142-58146161 None:intergenic 40.0%
ATGGAAGAAGTTTCTTTGGC+TGG - chr3_3:58146219-58146238 Msa0460660:intron 40.0%
AACAGCTCTATCAAAAGGGA+GGG + chr3_3:58146247-58146266 None:intergenic 40.0%
! CTAACTATATGTGTCGGTGT+CGG + chr3_3:58146590-58146609 None:intergenic 40.0%
GGTGCATATTTACTCAAGTG+TGG - chr3_3:58147004-58147023 Msa0460660:intron 40.0%
TTACTCAAGTGTGGTAACAG+AGG - chr3_3:58147013-58147032 Msa0460660:intron 40.0%
! AAATAGGCATTGTACTGGCA+TGG - chr3_3:58147150-58147169 Msa0460660:intron 40.0%
CTAGATATAACCAGGGGAAA+AGG + chr3_3:58147418-58147437 None:intergenic 40.0%
! CTTTTCCCCTGGTTATATCT+AGG - chr3_3:58147416-58147435 Msa0460660:intron 40.0%
CTCATCCTAGATATAACCAG+GGG + chr3_3:58147424-58147443 None:intergenic 40.0%
CTCTCATCCTAGATATAACC+AGG + chr3_3:58147426-58147445 None:intergenic 40.0%
AGAAATTTGGTATGGTGCTC+AGG - chr3_3:58147444-58147463 Msa0460660:intron 40.0%
GAAATTTGGTATGGTGCTCA+GGG - chr3_3:58147445-58147464 Msa0460660:intron 40.0%
!! GAAAAGCATTTGCGATTGAG+CGG - chr3_3:58147474-58147493 Msa0460660:CDS 40.0%
! TCCCTCTCCTTGAACAATTT+TGG + chr3_3:58147505-58147524 None:intergenic 40.0%
GAGACAAAACGAAACCGAAA+AGG - chr3_3:58147641-58147660 Msa0460660:CDS 40.0%
GTTCACCATTAGCATAGATC+AGG + chr3_3:58147683-58147702 None:intergenic 40.0%
! CATTTTACAACCGTCTCTGA+GGG - chr3_3:58147778-58147797 Msa0460660:CDS 40.0%
! ATTTTACAACCGTCTCTGAG+GGG - chr3_3:58147779-58147798 Msa0460660:CDS 40.0%
TCAACTCAGATGTAAGACTC+TGG + chr3_3:58147835-58147854 None:intergenic 40.0%
TTTCGGCGTAAAATTCCAGA+GGG + chr3_3:58148072-58148091 None:intergenic 40.0%
TGACGCCTCTCAATTTACTA+AGG - chr3_3:58148113-58148132 Msa0460660:CDS 40.0%
!! CGTTCTGAAAGTGACAAAGT+AGG + chr3_3:58148519-58148538 None:intergenic 40.0%
! TCAGAACGGTGTTTTTCTGA+CGG - chr3_3:58148531-58148550 Msa0460660:CDS 40.0%
TTGTACATCTAACATTGCGG+TGG + chr3_3:58148877-58148896 None:intergenic 40.0%
GTTTCGTAACTATTGCAGCA+TGG + chr3_3:58148920-58148939 None:intergenic 40.0%
GCTGCAATAGTTACGAAACA+AGG - chr3_3:58148921-58148940 Msa0460660:CDS 40.0%
AAGGGAGAATTAGAAGTCAG+TGG - chr3_3:58149147-58149166 Msa0460660:CDS 40.0%
AGTATTTCCAGCATTGCTTG+TGG - chr3_3:58149206-58149225 Msa0460660:CDS 40.0%
ACGTATGGAGATGGTACATT+TGG - chr3_3:58149272-58149291 Msa0460660:CDS 40.0%
! GATGGTACATTTGGAGTACT+TGG - chr3_3:58149281-58149300 Msa0460660:CDS 40.0%
! ACATTTGGAGTACTTGGACA+TGG - chr3_3:58149287-58149306 Msa0460660:CDS 40.0%
! CATTTGGAGTACTTGGACAT+GGG - chr3_3:58149288-58149307 Msa0460660:CDS 40.0%
GACTGGTAAGCTGTTTACAT+GGG - chr3_3:58149445-58149464 Msa0460660:CDS 40.0%
ACTGGTAAGCTGTTTACATG+GGG - chr3_3:58149446-58149465 Msa0460660:CDS 40.0%
ACAAGCTGTGAAACACATGT+CGG + chr3_3:58149524-58149543 None:intergenic 40.0%
! GCAATGGGAAGTGCAAAATA+TGG - chr3_3:58149617-58149636 Msa0460660:intron 40.0%
!!! GTTGCTGTTTTGACATCTTC+AGG - chr3_3:58149737-58149756 Msa0460660:intron 40.0%
!!! ACAAGGTGTGTATCGGTTTT+CGG + chr3_3:58149816-58149835 None:intergenic 40.0%
AATGGTTGTAGGTTACCGTT+TGG - chr3_3:58149947-58149966 Msa0460660:CDS 40.0%
TTCTTCCTTGTGAAGCCAAA+CGG + chr3_3:58149965-58149984 None:intergenic 40.0%
GCAACAATCAGCAGATACAA+AGG - chr3_3:58150161-58150180 Msa0460660:intron 40.0%
AGGCATCATCAGAACATGAT+TGG - chr3_3:58150181-58150200 Msa0460660:intron 40.0%
GTTTGACTAAGAGACAACAG+AGG + chr3_3:58150250-58150269 None:intergenic 40.0%
CTCTTAGTCAAACGTGTTAC+CGG - chr3_3:58150257-58150276 Msa0460660:CDS 40.0%
! TTCCACTAGGCATGTTTTTC+CGG + chr3_3:58150279-58150298 None:intergenic 40.0%
AATCCAACATGAAAGCCAAC+GGG - chr3_3:58150312-58150331 Msa0460660:CDS 40.0%
AACTATCTTCTACATCCCGT+TGG + chr3_3:58150330-58150349 None:intergenic 40.0%
AGTGTGATACAATGTGGACA+AGG - chr3_3:58150364-58150383 Msa0460660:intron 40.0%
! AGAGTGTCAACAAAAAGTCG+AGG - chr3_3:58150706-58150725 Msa0460660:intron 40.0%
AACAAAAAGTCGAGGAGAGT+TGG - chr3_3:58150714-58150733 Msa0460660:intron 40.0%
TAAGTGCAAAGCAGCAAAAG+AGG - chr3_3:58150760-58150779 Msa0460660:intron 40.0%
GACAATCTCACAAGTGCTTA+CGG - chr3_3:58150972-58150991 Msa0460660:intron 40.0%
ATCCAAGTTGCTGCATATCA+TGG - chr3_3:58151030-58151049 Msa0460660:intron 40.0%
TTCCATGATATGCAGCAACT+TGG + chr3_3:58151035-58151054 None:intergenic 40.0%
! TTAAGGCCTTTTTCTCCACT+CGG + chr3_3:58151551-58151570 None:intergenic 40.0%
ACCTAAATCTCACACGCTTA+AGG + chr3_3:58151568-58151587 None:intergenic 40.0%
TTTCGCAGAAAGAAGCTGAA+AGG - chr3_3:58151786-58151805 Msa0460660:five_prime_UTR 40.0%
ACCATAGTTCTTAGTGTAGG+AGG - chr3_3:58151910-58151929 Msa0460660:five_prime_UTR 40.0%
ACCTCCTACACTAAGAACTA+TGG + chr3_3:58151914-58151933 None:intergenic 40.0%
GGTTAGACAGAGTGTAAGAG+TGG + chr3_3:58146024-58146043 None:intergenic 45.0%
CAACAGCTCTATCAAAAGGG+AGG + chr3_3:58146248-58146267 None:intergenic 45.0%
TTGAAGGTAACACTTGGGCT+AGG - chr3_3:58146529-58146548 Msa0460660:CDS 45.0%
! AGTCGGAAAGGACAGAGTTT+TGG + chr3_3:58147043-58147062 None:intergenic 45.0%
TCATGCATACCGGAGAAAGT+CGG + chr3_3:58147060-58147079 None:intergenic 45.0%
CCTAGTAGATCGTGACAACA+AGG + chr3_3:58147176-58147195 None:intergenic 45.0%
! CCTTGTTGTCACGATCTACT+AGG - chr3_3:58147173-58147192 Msa0460660:CDS 45.0%
ATCTACTAGGATTCAGCCCT+TGG - chr3_3:58147186-58147205 Msa0460660:CDS 45.0%
GACAAGAATCGGAACACCAA+GGG + chr3_3:58147205-58147224 None:intergenic 45.0%
TGACAAGAATCGGAACACCA+AGG + chr3_3:58147206-58147225 None:intergenic 45.0%
! CGGCTCACCATTTTCAGATA+AGG - chr3_3:58147613-58147632 Msa0460660:CDS 45.0%
TGGTGAACACTCTCTTGATC+TGG - chr3_3:58147695-58147714 Msa0460660:CDS 45.0%
CCTCAGAGACGGTTGTAAAA+TGG + chr3_3:58147780-58147799 None:intergenic 45.0%
! CCATTTTACAACCGTCTCTG+AGG - chr3_3:58147777-58147796 Msa0460660:CDS 45.0%
AGTTCAAATCCCCTCAGAGA+CGG + chr3_3:58147791-58147810 None:intergenic 45.0%
ACAAAGCACAAGCTGCTACT+TGG - chr3_3:58147950-58147969 Msa0460660:CDS 45.0%
!! CAAGCTGCTACTTGGTTTGT+TGG - chr3_3:58147958-58147977 Msa0460660:CDS 45.0%
CTTTCGGCGTAAAATTCCAG+AGG + chr3_3:58148073-58148092 None:intergenic 45.0%
CTCGTGTTTGTGAATCAACG+TGG - chr3_3:58148272-58148291 Msa0460660:CDS 45.0%
TATGCCATGAATGCTGGAGA+GGG + chr3_3:58148595-58148614 None:intergenic 45.0%
TTATGCCATGAATGCTGGAG+AGG + chr3_3:58148596-58148615 None:intergenic 45.0%
GTCTGTTATGCCATGAATGC+TGG + chr3_3:58148601-58148620 None:intergenic 45.0%
ATTGTTTCCTACAAGTGCGG+AGG + chr3_3:58148742-58148761 None:intergenic 45.0%
AAGGATGTCATGATATGGGG+TGG - chr3_3:58148768-58148787 Msa0460660:CDS 45.0%
!! ATGATATGGGGTGGTGGAAT+TGG - chr3_3:58148777-58148796 Msa0460660:CDS 45.0%
GTGGAATTGGTTGCCTTGTA+GGG - chr3_3:58148790-58148809 Msa0460660:CDS 45.0%
! GCGGTGGATTCTAGTAACTT+TGG + chr3_3:58148861-58148880 None:intergenic 45.0%
AACAAGGGGAAGTTTACTGC+TGG - chr3_3:58148937-58148956 Msa0460660:CDS 45.0%
ACAAGGGGAAGTTTACTGCT+GGG - chr3_3:58148938-58148957 Msa0460660:CDS 45.0%
AAGTTTACTGCTGGGGTCAA+GGG - chr3_3:58148946-58148965 Msa0460660:CDS 45.0%
! AAGGGAAGTGTGGAAGGTTA+GGG - chr3_3:58148964-58148983 Msa0460660:CDS 45.0%
!! ACATGTGCTTTGACGGATTC+CGG - chr3_3:58149077-58149096 Msa0460660:CDS 45.0%
ACTGCAATCGTCTCTAGTTG+CGG - chr3_3:58149239-58149258 Msa0460660:CDS 45.0%
CGGTTATTCACGTATGGAGA+TGG - chr3_3:58149263-58149282 Msa0460660:CDS 45.0%
CTCTTAAGGGTCTATGTGTG+AGG - chr3_3:58149348-58149367 Msa0460660:CDS 45.0%
TGCTTGTGGAACATGGCATA+CGG - chr3_3:58149376-58149395 Msa0460660:CDS 45.0%
CGACTGGTAAGCTGTTTACA+TGG - chr3_3:58149444-58149463 Msa0460660:CDS 45.0%
ACATGGGGTGATGCAGATAA+AGG - chr3_3:58149461-58149480 Msa0460660:intron 45.0%
CATGGGGTGATGCAGATAAA+GGG - chr3_3:58149462-58149481 Msa0460660:intron 45.0%
TCCACATGTTAAGGACAGAG+CGG - chr3_3:58149652-58149671 Msa0460660:intron 45.0%
GAAAATGGAGAACTAGGGCT+AGG - chr3_3:58149785-58149804 Msa0460660:intron 45.0%
!! TGAGGCTTTAAGAGATAGGC+AGG - chr3_3:58149841-58149860 Msa0460660:CDS 45.0%
TTTGAATGCATCTCTAGCCC+CGG - chr3_3:58150042-58150061 Msa0460660:intron 45.0%
GCACGATTCACAAACACGAA+AGG + chr3_3:58150080-58150099 None:intergenic 45.0%
GGTGATGTCACTGAAGATAG+AGG - chr3_3:58150202-58150221 Msa0460660:intron 45.0%
TACCGGAAAAACATGCCTAG+TGG - chr3_3:58150274-58150293 Msa0460660:CDS 45.0%
GGAAAAACATGCCTAGTGGA+AGG - chr3_3:58150278-58150297 Msa0460660:CDS 45.0%
AAACATGCCTAGTGGAAGGA+AGG - chr3_3:58150282-58150301 Msa0460660:CDS 45.0%
TTCCAAACCTTCCTTCCACT+AGG + chr3_3:58150292-58150311 None:intergenic 45.0%
GAGGTAATGACTCCACTTTC+AGG - chr3_3:58150505-58150524 Msa0460660:CDS 45.0%
GTATAAGCTATCCTGGAGAG+TGG - chr3_3:58150906-58150925 Msa0460660:CDS 45.0%
GCAGCAACTTGGATCCTATT+TGG + chr3_3:58151024-58151043 None:intergenic 45.0%
GCCTCAAAGTCATATTGGGT+TGG - chr3_3:58151133-58151152 Msa0460660:intron 45.0%
GCCAACCCAATATGACTTTG+AGG + chr3_3:58151137-58151156 None:intergenic 45.0%
ATGGCCTAGAACAAAAGGCT+GGG - chr3_3:58151276-58151295 Msa0460660:intron 45.0%
CAGTCCAAGAAATGCCAACA+CGG - chr3_3:58151346-58151365 Msa0460660:intron 45.0%
ATTCGATAGACTGTCCGTGT+TGG + chr3_3:58151363-58151382 None:intergenic 45.0%
GCCTTAAGCGTGTGAGATTT+AGG - chr3_3:58151564-58151583 Msa0460660:intron 45.0%
CTTTCTGCGAAAATCGCTTC+CGG + chr3_3:58151778-58151797 None:intergenic 45.0%
AGAAAGAAGCTGAAAGGTGG+TGG - chr3_3:58151792-58151811 Msa0460660:five_prime_UTR 45.0%
GAAAGAAGCTGAAAGGTGGT+GGG - chr3_3:58151793-58151812 Msa0460660:five_prime_UTR 45.0%
CTTAGTGTAGGAGGTGATAC+TGG - chr3_3:58151919-58151938 Msa0460660:five_prime_UTR 45.0%
! AACACTTGGGCTAGGAAGCA+CGG - chr3_3:58146537-58146556 Msa0460660:CDS 50.0%
ATCAGTGTCCGTGTCATGTC+CGG - chr3_3:58146653-58146672 Msa0460660:CDS 50.0%
TACAGACACCGGACATGACA+CGG + chr3_3:58146664-58146683 None:intergenic 50.0%
CTGTCCTTTCCGACTTTCTC+CGG - chr3_3:58147048-58147067 Msa0460660:intron 50.0%
CATACCGGAGAAAGTCGGAA+AGG + chr3_3:58147055-58147074 None:intergenic 50.0%
AGTTGTGTCAGTAGTCCCTC+TGG - chr3_3:58148054-58148073 Msa0460660:CDS 50.0%
GATGTCATGATATGGGGTGG+TGG - chr3_3:58148771-58148790 Msa0460660:CDS 50.0%
GGTGGAATTGGTTGCCTTGT+AGG - chr3_3:58148789-58148808 Msa0460660:CDS 50.0%
CAAGGGGAAGTTTACTGCTG+GGG - chr3_3:58148939-58148958 Msa0460660:CDS 50.0%
GAAGTTTACTGCTGGGGTCA+AGG - chr3_3:58148945-58148964 Msa0460660:CDS 50.0%
! CAAGGGAAGTGTGGAAGGTT+AGG - chr3_3:58148963-58148982 Msa0460660:CDS 50.0%
ATTCCGGTGACGTATACACG+TGG - chr3_3:58149093-58149112 Msa0460660:CDS 50.0%
TTCCGGTGACGTATACACGT+GGG - chr3_3:58149094-58149113 Msa0460660:CDS 50.0%
CAATCGTCTCTAGTTGCGGT+CGG - chr3_3:58149243-58149262 Msa0460660:CDS 50.0%
TGCGGTCGGTTATTCACGTA+TGG - chr3_3:58149257-58149276 Msa0460660:CDS 50.0%
! TGTGTGAGGTCTGTTGCTTG+TGG - chr3_3:58149362-58149381 Msa0460660:CDS 50.0%
! GGTCTGTTGCTTGTGGAACA+TGG - chr3_3:58149369-58149388 Msa0460660:CDS 50.0%
GATGCAGATAAAGGGAGGCT+TGG - chr3_3:58149470-58149489 Msa0460660:intron 50.0%
ACCGCTCTGTCCTTAACATG+TGG + chr3_3:58149656-58149675 None:intergenic 50.0%
TGTTAAGGACAGAGCGGTTG+TGG - chr3_3:58149658-58149677 Msa0460660:intron 50.0%
!! TTCAGGGAGTGTCTACACGT+GGG - chr3_3:58149754-58149773 Msa0460660:intron 50.0%
ACGTGGGGCAAAGGTGAAAA+TGG - chr3_3:58149770-58149789 Msa0460660:intron 50.0%
! GGTTACCGTTTGGCTTCACA+AGG - chr3_3:58149957-58149976 Msa0460660:CDS 50.0%
AAAGGCCTTGCTCTTAACCG+GGG + chr3_3:58150062-58150081 None:intergenic 50.0%
GAAAGGCCTTGCTCTTAACC+GGG + chr3_3:58150063-58150082 None:intergenic 50.0%
CGAAAGGCCTTGCTCTTAAC+CGG + chr3_3:58150064-58150083 None:intergenic 50.0%
TGCCTAGTGGAAGGAAGGTT+TGG - chr3_3:58150287-58150306 Msa0460660:CDS 50.0%
!! CATCCCGTTGGCTTTCATGT+TGG + chr3_3:58150318-58150337 None:intergenic 50.0%
AATTCAGAGGCTGAGAGCTG+AGG - chr3_3:58150486-58150505 Msa0460660:CDS 50.0%
! GAGTTGGTCTGTTGCCAAAG+AGG - chr3_3:58150730-58150749 Msa0460660:intron 50.0%
GCACTTAGCAGCTTCCTCTT+TGG + chr3_3:58150747-58150766 None:intergenic 50.0%
CCATAATGTCTCCACTCTCC+AGG + chr3_3:58150920-58150939 None:intergenic 50.0%
CCTGGAGAGTGGAGACATTA+TGG - chr3_3:58150917-58150936 Msa0460660:CDS 50.0%
TTGCAGCTTCACACGATCTC+AGG - chr3_3:58151242-58151261 Msa0460660:intron 50.0%
CATGGCCTAGAACAAAAGGC+TGG - chr3_3:58151275-58151294 Msa0460660:intron 50.0%
! GTAGCCCAGCCTTTTGTTCT+AGG + chr3_3:58151283-58151302 None:intergenic 50.0%
! CTGTCCGTGTTGGCATTTCT+TGG + chr3_3:58151353-58151372 None:intergenic 50.0%
ACATTGACAAAGTCGCCGAG+TGG - chr3_3:58151533-58151552 Msa0460660:intron 50.0%
AAGTCGCCGAGTGGAGAAAA+AGG - chr3_3:58151542-58151561 Msa0460660:intron 50.0%
CGCAGAAAGAAGCTGAAAGG+TGG - chr3_3:58151789-58151808 Msa0460660:five_prime_UTR 50.0%
!! TAGGAGGTGATACTGGCTTC+AGG - chr3_3:58151926-58151945 Msa0460660:five_prime_UTR 50.0%
! TAGGAAGCACGGACACTCCT+CGG - chr3_3:58146548-58146567 Msa0460660:CDS 55.0%
GACACGACACTCCTAATCCG+AGG + chr3_3:58146568-58146587 None:intergenic 55.0%
TCGTCCCTCTCCAGCATTCA+TGG - chr3_3:58148588-58148607 Msa0460660:CDS 55.0%
TTTCCTACAAGTGCGGAGGC+AGG + chr3_3:58148738-58148757 None:intergenic 55.0%
TCCGGTGACGTATACACGTG+GGG - chr3_3:58149095-58149114 Msa0460660:CDS 55.0%
CCATTCGCCACAAGCAATGC+TGG + chr3_3:58149216-58149235 None:intergenic 55.0%
CCAGCATTGCTTGTGGCGAA+TGG - chr3_3:58149213-58149232 Msa0460660:CDS 55.0%
GGGGTGATGCAGATAAAGGG+AGG - chr3_3:58149465-58149484 Msa0460660:intron 55.0%
GACAGAGCGGTTGTGGTTGA+AGG - chr3_3:58149665-58149684 Msa0460660:intron 55.0%
!! CTTCAGGGAGTGTCTACACG+TGG - chr3_3:58149753-58149772 Msa0460660:intron 55.0%
!! TCAGGGAGTGTCTACACGTG+GGG - chr3_3:58149755-58149774 Msa0460660:intron 55.0%
AGTGTCTACACGTGGGGCAA+AGG - chr3_3:58149761-58149780 Msa0460660:intron 55.0%
TCTAGCCCCGGTTAAGAGCA+AGG - chr3_3:58150054-58150073 Msa0460660:intron 55.0%
GCACGGACACTCCTCGGATT+AGG - chr3_3:58146554-58146573 Msa0460660:CDS 60.0%
GGTATGGTGCTCAGGGAAGC+AGG - chr3_3:58147452-58147471 Msa0460660:intron 60.0%
TGCTGGGGTCAAGGGAAGTG+TGG - chr3_3:58148954-58148973 Msa0460660:CDS 60.0%
! GGGGTCAAGGGAAGTGTGGA+AGG - chr3_3:58148958-58148977 Msa0460660:CDS 60.0%
CCCCCACGTGTATACGTCAC+CGG + chr3_3:58149099-58149118 None:intergenic 60.0%
CCGGTGACGTATACACGTGG+GGG - chr3_3:58149096-58149115 Msa0460660:CDS 60.0%
CCTACAAGTGCGGAGGCAGG+AGG + chr3_3:58148735-58148754 None:intergenic 65.0%
CCTCCTGCCTCCGCACTTGT+AGG - chr3_3:58148732-58148751 Msa0460660:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 58145865 58152102 58145865 ID=Msa0460660;Name=Msa0460660
chr3_3 mRNA 58145865 58152102 58145865 ID=Msa0460660-mRNA-1;Parent=Msa0460660;Name=Msa0460660-mRNA-1;_AED=0.04;_eAED=0.04;_QI=348|1|1|1|1|1|9|237|1035
chr3_3 exon 58145865 58146192 58145865 ID=Msa0460660-mRNA-1:exon:12050;Parent=Msa0460660-mRNA-1
chr3_3 exon 58146382 58146719 58146382 ID=Msa0460660-mRNA-1:exon:12049;Parent=Msa0460660-mRNA-1
chr3_3 exon 58147162 58147308 58147162 ID=Msa0460660-mRNA-1:exon:12048;Parent=Msa0460660-mRNA-1
chr3_3 exon 58147460 58149472 58147460 ID=Msa0460660-mRNA-1:exon:12047;Parent=Msa0460660-mRNA-1
chr3_3 exon 58149833 58150027 58149833 ID=Msa0460660-mRNA-1:exon:12046;Parent=Msa0460660-mRNA-1
chr3_3 exon 58150251 58150337 58150251 ID=Msa0460660-mRNA-1:exon:12045;Parent=Msa0460660-mRNA-1
chr3_3 exon 58150440 58150529 58150440 ID=Msa0460660-mRNA-1:exon:12044;Parent=Msa0460660-mRNA-1
chr3_3 exon 58150898 58150984 58150898 ID=Msa0460660-mRNA-1:exon:12043;Parent=Msa0460660-mRNA-1
chr3_3 exon 58151695 58152102 58151695 ID=Msa0460660-mRNA-1:exon:12042;Parent=Msa0460660-mRNA-1
chr3_3 five_prime_UTR 58151755 58152102 58151755 ID=Msa0460660-mRNA-1:five_prime_utr;Parent=Msa0460660-mRNA-1
chr3_3 CDS 58151695 58151754 58151695 ID=Msa0460660-mRNA-1:cds;Parent=Msa0460660-mRNA-1
chr3_3 CDS 58150898 58150984 58150898 ID=Msa0460660-mRNA-1:cds;Parent=Msa0460660-mRNA-1
chr3_3 CDS 58150440 58150529 58150440 ID=Msa0460660-mRNA-1:cds;Parent=Msa0460660-mRNA-1
chr3_3 CDS 58150251 58150337 58150251 ID=Msa0460660-mRNA-1:cds;Parent=Msa0460660-mRNA-1
chr3_3 CDS 58149833 58150027 58149833 ID=Msa0460660-mRNA-1:cds;Parent=Msa0460660-mRNA-1
chr3_3 CDS 58147460 58149472 58147460 ID=Msa0460660-mRNA-1:cds;Parent=Msa0460660-mRNA-1
chr3_3 CDS 58147162 58147308 58147162 ID=Msa0460660-mRNA-1:cds;Parent=Msa0460660-mRNA-1
chr3_3 CDS 58146382 58146719 58146382 ID=Msa0460660-mRNA-1:cds;Parent=Msa0460660-mRNA-1
chr3_3 CDS 58146102 58146192 58146102 ID=Msa0460660-mRNA-1:cds;Parent=Msa0460660-mRNA-1
chr3_3 three_prime_UTR 58145865 58146101 58145865 ID=Msa0460660-mRNA-1:three_prime_utr;Parent=Msa0460660-mRNA-1
Gene Sequence

>Msa0460660

ATGACAATGGAAGAAGTTTCTTTGGCTGGAACCCTCCCTTTTGATAGAGCTGTTGAACAGGCAATTGTATCTATAAAGAAAGGTGCATATTTACTCAAGTGTGGTAACAGAGGAAAGCCAAAACTCTGTCCTTTCCGACTTTCTCCGGATGAGAGAAATTTGGTATGGTGCTCAGGGAAGCAGGAAAAGCATTTGCGATTGAGCGGAGTAACCAAAATTGTTCAAGGAGAGGGAAATATAAGGTCTCAGAGACAAAACGAAACCGAAAAGGAGTGCCATTCATTTTCCCTGATCTATGCTAATGGTGAACACTCTCTTGATCTGATATGCAAAGACAAAGCACAAGCTGCTACTTGGTTTGTTGGATTGAAAGCTGTGATTTCTAGGTGCCAGCAACCAAAAGCTTTTAGTAGTTTAAGAAGCTGCAAAGGAGTGCAGAGTTGTGTCAGTAGTCCCTCTGGAATTTTACGCCGAAAGAAAAATCTTGGTCTTCTAGATGACGCCTCTCAATTTACTAAGGTACACAGCGTATGCGCAAGTCCTACTTTGTCACTTTCAGAACGGTGTTTTTCTGACGGCTTGTCATATAAATCTGACTTTTATTCATCGGCATCGTCCCTCTCCAGCATTCATGGCATAACAGACAATTCAGTCCCAAGTTCTCCATATATTAATCCAGATATTCATAGCAATATAAAAACATCTCGTTTCGAAAAAGAGTACAAGAAGGAATTGTCATCAAATAGATCTATCATGCCTCCTGCCTCCGCACTTGTAGGAAACAATGTATTGAAGGATGTCATGATATGGGGTGGTGGAATTGGTTGCCTTGTAGGGATTGTGAATGAAAGGTTTGTTCAAAATAGTATTTATTCTTTAGTTCCAAAGTTACTAGAATCCACCGCAATGTTAGATGTACAAAATGTAGCTTTAGGAGGAAACCATGCTGCAATAGTTACGAAACAAGGGGAAGTTTACTGCTGGGGTCAAGGGAAGTGTGGAAGGTTAGGGCAAAGAATTGATATGGACATTAGCTCCCCGAAAATAGTTGATTCTCTTAGTGATATTCGTGTAAAAAAAGTTGCTTGTGGCGAGTATCATACATGTGCTTTGACGGATTCCGGTGACGTATACACGTGGGGGAAAGACTCTTGTTCAGATTTGGTTGATGAAGGGAGAATTAGAAGTCAGTGGTTAACACATAAACTTTCATTACCTGTCGAAGGTATTAGTATTTCCAGCATTGCTTGTGGCGAATGGCATACTGCAATCGTCTCTAGTTGCGGTCGGTTATTCACGTATGGAGATGGTACATTTGGAGTACTTGGACATGGGAATTATCACAGCTTCTCTAGTCCAAAAGAAGTTGAGTCTCTTAAGGGTCTATGTGTGAGGTCTGTTGCTTGTGGAACATGGCATACGGCAGCAATTATTGAAGTCTCTGCCGAACGCTTTAAGTACAATACTTCGACTGGTAAGCTGTTTACATGGGGTGATGCAGATAAAGGGAGGCTTGGTCATGCTGATAATGTAAACAAGCTTGTACCGACATGTGTTTCACAGCTTGTCGACTACGATTTTGTTCAAGTATCTTGTGGAAGAATGATGACTTTAGCACTTACTAACATGGGAAAAGTTTTTGCAATGGGAAGTGCAAAATATGGACAATTGGGAAATCCACATGTTAAGGACAGAGCGGTTGTGGTTGAAGGAATGCTTAAACAAGAGTATGTTAAAATGATATCTTGTGGTTCATATCACGTTGCTGTTTTGACATCTTCAGGGAGTGTCTACACGTGGGGCAAAGGTGAAAATGGAGAACTAGGGCTAGGCGATACCGAAAACCGATACACACCTTGTTTTGTTGAGGCTTTAAGAGATAGGCAGGTAGATACAATAACATGTGGACCAAGTTTCACAGTTGCAATATGTTTGCACAAACCTATTTCAATTAGTGACCAATCAAGTTGTAATGGTTGTAGGTTACCGTTTGGCTTCACAAGGAAGAAACATAACTGTTATAATTGCGGTCTTTTGTTTTGCCGCAGTTGTAGTAGCAAAAAAGTTTTGAATGCATCTCTAGCCCCGGTTAAGAGCAAGGCCTTTCGTGTTTGTGAATCGTGCTTCAATAAAAAGCAAGGAAGTAGTGAACGTTCATCTATGGACTCATCAAAGTCTCGAAATTGCAACAATCAGCAGATACAAAGGCATCATCAGAACATGATTGGTGATGTCACTGAAGATAGAGGAGAAACAAATGTGACAAATGGTCCTCTGTTGTCTCTTAGTCAAACGTGTTACCGGAAAAACATGCCTAGTGGAAGGAAGGTTTGGAAAATCCAACATGAAAGCCAACGGGATGTAGAAGATAGTTCTTCTACGTTAGGTAGTGTGATACAATGTGGACAAGGACAAGTACCATATTCAGCACAATTTAGAATCAATTGTACAGAAAATTCAGTTGTGCATGAGACAGAAACAACAAAATCCGATAAGTTGCTCATAGAAGAAATTCAGAGGCTGAGAGCTGAGGCTAAGAGACTTGAAAAGCAATGTGAGCTGAAAAATCAAGAAATACAAGAGTGTCAACAAAAAGTCGAGGAGAGTTGGTCTGTTGCCAAAGAGGAAGCTGCTAAGTGCAAAGCAGCAAAAGAGGTCATAAAAGCTTTGGCATTAAGGCTTCACACGATCTCAGGAAAAGATAATCATGGCCTAGAACAAAAGGCTGGGCTACAAGAATTTCTTCCAAATTTGGCACCTATACATACTGATATGAACAGTCCAAGAAATGCCAACACGGACAGTCTATCGAATTCCCCTATAATATTCTCTAGTGCATTAAAATCCAAATTTGGGAGAAGTATTCTTCTTAAAAAGGACAATAATCTCACTAAAGCAGAATCTCAACAAGAGAATGCATTGAAGGTTGAATGGGTTGAACAATATGAGAATGGTGTTTACATAACATTGACAAAGTCGCCGAGTGGAGAAAAAGGCCTTAAGCGTGTGAGATTTAGCCGGAAGCGATTTTCGCAGAAAGAAGCTGAAAGGTGGTGGGAAGAGAATCAAACAAAAGTGCATCATAAATATGAAATTGAAACTAGGTGA
Protein sequence

>Msa0460660

MTMEEVSLAGTLPFDRAVEQAIVSIKKGAYLLKCGNRGKPKLCPFRLSPDERNLVWCSGKQEKHLRLSGVTKIVQGEGNIRSQRQNETEKECHSFSLIYANGEHSLDLICKDKAQAATWFVGLKAVISRCQQPKAFSSLRSCKGVQSCVSSPSGILRRKKNLGLLDDASQFTKVHSVCASPTLSLSERCFSDGLSYKSDFYSSASSLSSIHGITDNSVPSSPYINPDIHSNIKTSRFEKEYKKELSSNRSIMPPASALVGNNVLKDVMIWGGGIGCLVGIVNERFVQNSIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKKVACGEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKLSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADKGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAVVVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAICLHKPISISDQSSCNGCRLPFGFTRKKHNCYNCGLLFCRSCSSKKVLNASLAPVKSKAFRVCESCFNKKQGSSERSSMDSSKSRNCNNQQIQRHHQNMIGDVTEDRGETNVTNGPLLSLSQTCYRKNMPSGRKVWKIQHESQRDVEDSSSTLGSVIQCGQGQVPYSAQFRINCTENSVVHETETTKSDKLLIEEIQRLRAEAKRLEKQCELKNQEIQECQQKVEESWSVAKEEAAKCKAAKEVIKALALRLHTISGKDNHGLEQKAGLQEFLPNLAPIHTDMNSPRNANTDSLSNSPIIFSSALKSKFGRSILLKKDNNLTKAESQQENALKVEWVEQYENGVYITLTKSPSGEKGLKRVRFSRKRFSQKEAERWWEENQTKVHHKYEIETR*