Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0650090 | XP_003607708.1 | 96.000 | 450 | 4 | 3 | 1 | 449 | 1 | 437 | 0.0 | 865 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0650090 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0650090 | 0.800709 | 1.268815e-48 | -8.615850e-47 |
| Msa0005050 | Msa0650090 | 0.806667 | 7.359758e-50 | -8.615850e-47 |
| Msa0016670 | Msa0650090 | 0.876078 | 1.858394e-68 | -8.615850e-47 |
| Msa0017510 | Msa0650090 | 0.825604 | 4.282853e-54 | -8.615850e-47 |
| Msa0021810 | Msa0650090 | 0.807968 | 3.901123e-50 | -8.615850e-47 |
| Msa0027260 | Msa0650090 | 0.817607 | 3.020207e-52 | -8.615850e-47 |
| Msa0032840 | Msa0650090 | -0.826008 | 3.432555e-54 | -8.615850e-47 |
| Msa0036430 | Msa0650090 | 0.821188 | 4.610146e-53 | -8.615850e-47 |
| Msa0043670 | Msa0650090 | -0.814829 | 1.262060e-51 | -8.615850e-47 |
| Msa0044020 | Msa0650090 | 0.826165 | 3.150863e-54 | -8.615850e-47 |
| Msa0046100 | Msa0650090 | 0.812190 | 4.801771e-51 | -8.615850e-47 |
| Msa0046750 | Msa0650090 | 0.821288 | 4.372494e-53 | -8.615850e-47 |
| Msa0052610 | Msa0650090 | 0.807193 | 5.695804e-50 | -8.615850e-47 |
| Msa0053110 | Msa0650090 | 0.827318 | 1.671900e-54 | -8.615850e-47 |
| Msa0072810 | Msa0650090 | 0.835181 | 1.948866e-56 | -8.615850e-47 |
| Msa0073670 | Msa0650090 | 0.834176 | 3.486759e-56 | -8.615850e-47 |
| Msa0074320 | Msa0650090 | 0.819979 | 8.736402e-53 | -8.615850e-47 |
| Msa0081360 | Msa0650090 | 0.812411 | 4.296756e-51 | -8.615850e-47 |
| Msa0081480 | Msa0650090 | 0.804896 | 1.733304e-49 | -8.615850e-47 |
| Msa0083920 | Msa0650090 | 0.802515 | 5.409498e-49 | -8.615850e-47 |
| Msa0090590 | Msa0650090 | 0.830661 | 2.590529e-55 | -8.615850e-47 |
| Msa0092740 | Msa0650090 | -0.810238 | 1.273174e-50 | -8.615850e-47 |
| Msa0098440 | Msa0650090 | 0.810359 | 1.199032e-50 | -8.615850e-47 |
| Msa0103000 | Msa0650090 | 0.838061 | 3.596822e-57 | -8.615850e-47 |
| Msa0110360 | Msa0650090 | 0.838946 | 2.125851e-57 | -8.615850e-47 |
| Msa0110970 | Msa0650090 | 0.851078 | 1.121837e-60 | -8.615850e-47 |
| Msa0114540 | Msa0650090 | -0.806540 | 7.829981e-50 | -8.615850e-47 |
| Msa0115160 | Msa0650090 | 0.849792 | 2.575848e-60 | -8.615850e-47 |
| Msa0118570 | Msa0650090 | 0.808773 | 2.626066e-50 | -8.615850e-47 |
| Msa0120330 | Msa0650090 | 0.820310 | 7.337511e-53 | -8.615850e-47 |
| Msa0607200 | Msa0650090 | 0.804948 | 1.690460e-49 | -8.615850e-47 |
| Msa0609450 | Msa0650090 | 0.940369 | 2.626465e-100 | -8.615850e-47 |
| Msa0618040 | Msa0650090 | 0.816369 | 5.731183e-52 | -8.615850e-47 |
| Msa0620240 | Msa0650090 | 0.802701 | 4.951525e-49 | -8.615850e-47 |
| Msa0620990 | Msa0650090 | 0.831335 | 1.769495e-55 | -8.615850e-47 |
| Msa0624510 | Msa0650090 | 0.818016 | 2.442262e-52 | -8.615850e-47 |
| Msa0647380 | Msa0650090 | 0.825084 | 5.684728e-54 | -8.615850e-47 |
| Msa0650090 | Msa0663300 | 0.800196 | 1.614415e-48 | -8.615850e-47 |
| Msa0650090 | Msa0677290 | 0.857667 | 1.396324e-62 | -8.615850e-47 |
| Msa0650090 | Msa0683570 | 0.831440 | 1.667204e-55 | -8.615850e-47 |
| Msa0650090 | Msa0684500 | 0.802295 | 6.003882e-49 | -8.615850e-47 |
| Msa0650090 | Msa0692080 | 0.949684 | 7.720011e-108 | -8.615850e-47 |
| Msa0650090 | Msa0696620 | 0.802912 | 4.479323e-49 | -8.615850e-47 |
| Msa0650090 | Msa0701280 | 0.821906 | 3.146295e-53 | -8.615850e-47 |
| Msa0650090 | Msa0702340 | 0.815357 | 9.636105e-52 | -8.615850e-47 |
| Msa0650090 | Msa0702590 | 0.819663 | 1.031872e-52 | -8.615850e-47 |
| Msa0650090 | Msa0702660 | 0.818811 | 1.613175e-52 | -8.615850e-47 |
| Msa0650090 | Msa0703230 | 0.831835 | 1.332609e-55 | -8.615850e-47 |
| Msa0650090 | Msa0708520 | 0.805654 | 1.202677e-49 | -8.615850e-47 |
| Msa0650090 | Msa0718550 | 0.804125 | 2.509435e-49 | -8.615850e-47 |
| Msa0650090 | Msa0738040 | 0.817990 | 2.475964e-52 | -8.615850e-47 |
| Msa0650090 | Msa0747780 | 0.821985 | 3.016988e-53 | -8.615850e-47 |
| Msa0650090 | Msa0755340 | 0.824319 | 8.609725e-54 | -8.615850e-47 |
| Msa0650090 | Msa0760380 | 0.811083 | 8.357707e-51 | -8.615850e-47 |
| Msa0650090 | Msa0761580 | 0.810868 | 9.305644e-51 | -8.615850e-47 |
| Msa0650090 | Msa0778320 | 0.813950 | 1.974702e-51 | -8.615850e-47 |
| Msa0650090 | Msa0785210 | 0.838534 | 2.716979e-57 | -8.615850e-47 |
| Msa0650090 | Msa0787750 | 0.805134 | 1.545383e-49 | -8.615850e-47 |
| Msa0650090 | Msa0788770 | 0.835506 | 1.612748e-56 | -8.615850e-47 |
| Msa0650090 | Msa0813720 | 0.801352 | 9.375414e-49 | -8.615850e-47 |
| Msa0650090 | Msa0813740 | 0.822222 | 2.659114e-53 | -8.615850e-47 |
| Msa0650090 | Msa0822990 | 0.802259 | 6.106538e-49 | -8.615850e-47 |
| Msa0650090 | Msa0824640 | 0.805130 | 1.548745e-49 | -8.615850e-47 |
| Msa0650090 | Msa0827620 | -0.804717 | 1.888797e-49 | -8.615850e-47 |
| Msa0650090 | Msa0850960 | 0.815332 | 9.761454e-52 | -8.615850e-47 |
| Msa0650090 | Msa0854830 | 0.800821 | 1.203744e-48 | -8.615850e-47 |
| Msa0650090 | Msa0856050 | 0.824290 | 8.743738e-54 | -8.615850e-47 |
| Msa0650090 | Msa0862100 | 0.819608 | 1.062349e-52 | -8.615850e-47 |
| Msa0650090 | Msa0864010 | 0.820803 | 5.655818e-53 | -8.615850e-47 |
| Msa0650090 | Msa0872310 | 0.820310 | 7.338020e-53 | -8.615850e-47 |
| Msa0650090 | Msa0880140 | 0.825103 | 5.626521e-54 | -8.615850e-47 |
| Msa0650090 | Msa0880440 | 0.810701 | 1.011245e-50 | -8.615850e-47 |
| Msa0650090 | Msa0888530 | 0.803477 | 3.421877e-49 | -8.615850e-47 |
| Msa0650090 | Msa0896970 | 0.833369 | 5.549542e-56 | -8.615850e-47 |
| Msa0650090 | Msa0905550 | 0.819854 | 9.334088e-53 | -8.615850e-47 |
| Msa0650090 | Msa0909230 | 0.810284 | 1.244618e-50 | -8.615850e-47 |
| Msa0650090 | Msa0930780 | 0.836268 | 1.033953e-56 | -8.615850e-47 |
| Msa0650090 | Msa0936340 | 0.822356 | 2.474442e-53 | -8.615850e-47 |
| Msa0650090 | Msa0937550 | 0.830415 | 2.974720e-55 | -8.615850e-47 |
| Msa0650090 | Msa0965070 | 0.809597 | 1.749247e-50 | -8.615850e-47 |
| Msa0650090 | Msa1012440 | 0.810189 | 1.304494e-50 | -8.615850e-47 |
| Msa0650090 | Msa1012700 | 0.852380 | 4.795104e-61 | -8.615850e-47 |
| Msa0650090 | Msa1012810 | 0.853743 | 1.953233e-61 | -8.615850e-47 |
| Msa0650090 | Msa1018790 | 0.832940 | 7.096120e-56 | -8.615850e-47 |
| Msa0650090 | Msa1037920 | 0.840645 | 7.677331e-58 | -8.615850e-47 |
| Msa0650090 | Msa1040830 | 0.829293 | 5.582295e-55 | -8.615850e-47 |
| Msa0650090 | Msa1041530 | 0.817502 | 3.189894e-52 | -8.615850e-47 |
| Msa0650090 | Msa1054240 | 0.830238 | 3.287342e-55 | -8.615850e-47 |
| Msa0650090 | Msa1055260 | 0.800408 | 1.461354e-48 | -8.615850e-47 |
| Msa0650090 | Msa1063950 | 0.812280 | 4.590760e-51 | -8.615850e-47 |
| Msa0650090 | Msa1066490 | 0.817937 | 2.545091e-52 | -8.615850e-47 |
| Msa0650090 | Msa1081570 | 0.807999 | 3.841677e-50 | -8.615850e-47 |
| Msa0650090 | Msa1082700 | 0.847244 | 1.307206e-59 | -8.615850e-47 |
| Msa0650090 | Msa1085200 | 0.803843 | 2.872334e-49 | -8.615850e-47 |
| Msa0650090 | Msa1091520 | 0.828864 | 7.092240e-55 | -8.615850e-47 |
| Msa0650090 | Msa1094420 | 0.843361 | 1.469236e-58 | -8.615850e-47 |
| Msa0650090 | Msa1097640 | 0.844348 | 7.994547e-59 | -8.615850e-47 |
| Msa0650090 | Msa1104140 | 0.803053 | 4.187179e-49 | -8.615850e-47 |
| Msa0650090 | Msa1115770 | 0.818988 | 1.470704e-52 | -8.615850e-47 |
| Msa0650090 | Msa1126510 | 0.840037 | 1.106918e-57 | -8.615850e-47 |
| Msa0650090 | Msa1126770 | 0.804674 | 1.928724e-49 | -8.615850e-47 |
| Msa0650090 | Msa1127140 | 0.811017 | 8.641009e-51 | -8.615850e-47 |
| Msa0650090 | Msa1127890 | 0.829957 | 3.848427e-55 | -8.615850e-47 |
| Msa0650090 | Msa1128710 | 0.803336 | 3.660136e-49 | -8.615850e-47 |
| Msa0650090 | Msa1129980 | 0.837637 | 4.620642e-57 | -8.615850e-47 |
| Msa0650090 | Msa1133000 | 0.802404 | 5.702372e-49 | -8.615850e-47 |
| Msa0650090 | Msa1134110 | 0.835914 | 1.271177e-56 | -8.615850e-47 |
| Msa0650090 | Msa1139810 | 0.845108 | 4.988827e-59 | -8.615850e-47 |
| Msa0650090 | Msa1144820 | 0.803036 | 4.223051e-49 | -8.615850e-47 |
| Msa0650090 | Msa1165870 | 0.805152 | 1.532270e-49 | -8.615850e-47 |
| Msa0650090 | Msa1166400 | 0.813964 | 1.960034e-51 | -8.615850e-47 |
| Msa0650090 | Msa1166860 | 0.828207 | 1.021905e-54 | -8.615850e-47 |
| Msa0650090 | Msa1173330 | 0.821285 | 4.378348e-53 | -8.615850e-47 |
| Msa0650090 | Msa1187840 | 0.811629 | 6.362193e-51 | -8.615850e-47 |
| Msa0650090 | Msa1196100 | 0.807163 | 5.780397e-50 | -8.615850e-47 |
| Msa0650090 | Msa1200020 | 0.816285 | 5.982468e-52 | -8.615850e-47 |
| Msa0650090 | Msa1201650 | 0.800464 | 1.423849e-48 | -8.615850e-47 |
| Msa0650090 | Msa1221560 | 0.804876 | 1.750559e-49 | -8.615850e-47 |
| Msa0650090 | Msa1224840 | 0.823105 | 1.656688e-53 | -8.615850e-47 |
| Msa0650090 | Msa1226620 | 0.832612 | 8.557093e-56 | -8.615850e-47 |
| Msa0650090 | Msa1228890 | 0.813462 | 2.528821e-51 | -8.615850e-47 |
| Msa0650090 | Msa1232710 | 0.838522 | 2.736129e-57 | -8.615850e-47 |
| Msa0650090 | Msa1236100 | 0.845548 | 3.791809e-59 | -8.615850e-47 |
| Msa0650090 | Msa1249870 | 0.805661 | 1.198292e-49 | -8.615850e-47 |
| Msa0650090 | Msa1252190 | 0.848754 | 5.009798e-60 | -8.615850e-47 |
| Msa0650090 | Msa1253310 | 0.811478 | 6.861744e-51 | -8.615850e-47 |
| Msa0650090 | Msa1254610 | 0.805045 | 1.613426e-49 | -8.615850e-47 |
| Msa0650090 | Msa1256340 | 0.817747 | 2.809006e-52 | -8.615850e-47 |
| Msa0650090 | Msa1264020 | 0.809684 | 1.675348e-50 | -8.615850e-47 |
| Msa0650090 | Msa1272900 | 0.809852 | 1.541974e-50 | -8.615850e-47 |
| Msa0650090 | Msa1274060 | 0.816598 | 5.092706e-52 | -8.615850e-47 |
| Msa0650090 | Msa1274280 | 0.817178 | 3.773536e-52 | -8.615850e-47 |
| Msa0650090 | Msa1283170 | 0.831347 | 1.757542e-55 | -8.615850e-47 |
| Msa0650090 | Msa1292830 | 0.861245 | 1.174490e-63 | -8.615850e-47 |
| Msa0650090 | Msa1307570 | 0.816954 | 4.237701e-52 | -8.615850e-47 |
| Msa0650090 | Msa1307950 | 0.800310 | 1.530350e-48 | -8.615850e-47 |
| Msa0650090 | Msa1313300 | 0.842402 | 2.642785e-58 | -8.615850e-47 |
| Msa0650090 | Msa1316780 | 0.814709 | 1.341771e-51 | -8.615850e-47 |
| Msa0650090 | Msa1316830 | 0.808962 | 2.393679e-50 | -8.615850e-47 |
| Msa0650090 | Msa1336120 | 0.800992 | 1.110891e-48 | -8.615850e-47 |
| Msa0650090 | Msa1351760 | 0.815347 | 9.685693e-52 | -8.615850e-47 |
| Msa0650090 | Msa1363260 | 0.801889 | 7.276505e-49 | -8.615850e-47 |
| Msa0650090 | Msa1363330 | 0.822107 | 2.827472e-53 | -8.615850e-47 |
| Msa0650090 | Msa1364470 | -0.828385 | 9.256540e-55 | -8.615850e-47 |
| Msa0650090 | Msa1365150 | 0.822224 | 2.655719e-53 | -8.615850e-47 |
| Msa0650090 | Msa1365200 | 0.816086 | 6.627830e-52 | -8.615850e-47 |
| Msa0650090 | Msa1367880 | 0.822324 | 2.517757e-53 | -8.615850e-47 |
| Msa0650090 | Msa1373330 | 0.839616 | 1.424127e-57 | -8.615850e-47 |
| Msa0650090 | Msa1374550 | 0.800681 | 1.285661e-48 | -8.615850e-47 |
| Msa0650090 | Msa1379570 | 0.808341 | 3.247466e-50 | -8.615850e-47 |
| Msa0650090 | Msa1379760 | 0.808832 | 2.551358e-50 | -8.615850e-47 |
| Msa0650090 | Msa1379990 | 0.806302 | 8.786402e-50 | -8.615850e-47 |
| Msa0650090 | Msa1380280 | 0.801896 | 7.253702e-49 | -8.615850e-47 |
| Msa0650090 | Msa1386600 | 0.821168 | 4.660845e-53 | -8.615850e-47 |
| Msa0650090 | Msa1390270 | 0.822190 | 2.704503e-53 | -8.615850e-47 |
| Msa0650090 | Msa1390310 | 0.826303 | 2.921850e-54 | -8.615850e-47 |
| Msa0650090 | Msa1397810 | 0.800558 | 1.362604e-48 | -8.615850e-47 |
| Msa0650090 | Msa1406040 | 0.841177 | 5.564659e-58 | -8.615850e-47 |
| Msa0650090 | Msa1420060 | 0.828473 | 8.818470e-55 | -8.615850e-47 |
| Msa0650090 | Msa1438740 | 0.826147 | 3.181181e-54 | -8.615850e-47 |
| Msa0650090 | Msa1440260 | -0.822099 | 2.838903e-53 | -8.615850e-47 |
| Msa0650090 | Msa1448690 | 0.815954 | 7.094388e-52 | -8.615850e-47 |
| Msa0650090 | Msa1459380 | 0.804781 | 1.831721e-49 | -8.615850e-47 |
| Msa0650090 | Msa1466990 | 0.848717 | 5.129201e-60 | -8.615850e-47 |
| Msa0124340 | Msa0650090 | 0.821690 | 3.530158e-53 | -8.615850e-47 |
| Msa0124990 | Msa0650090 | 0.803371 | 3.599342e-49 | -8.615850e-47 |
| Msa0127820 | Msa0650090 | 0.800333 | 1.513712e-48 | -8.615850e-47 |
| Msa0128860 | Msa0650090 | 0.804618 | 1.981081e-49 | -8.615850e-47 |
| Msa0130570 | Msa0650090 | 0.813624 | 2.328999e-51 | -8.615850e-47 |
| Msa0134180 | Msa0650090 | 0.846874 | 1.651187e-59 | -8.615850e-47 |
| Msa0137610 | Msa0650090 | -0.818651 | 1.753872e-52 | -8.615850e-47 |
| Msa0143430 | Msa0650090 | 0.823423 | 1.396257e-53 | -8.615850e-47 |
| Msa0147560 | Msa0650090 | 0.838930 | 2.145515e-57 | -8.615850e-47 |
| Msa0157290 | Msa0650090 | 0.825764 | 3.924503e-54 | -8.615850e-47 |
| Msa0167480 | Msa0650090 | 0.802692 | 4.972774e-49 | -8.615850e-47 |
| Msa0172330 | Msa0650090 | 0.812233 | 4.699239e-51 | -8.615850e-47 |
| Msa0172350 | Msa0650090 | 0.817569 | 3.081040e-52 | -8.615850e-47 |
| Msa0174730 | Msa0650090 | 0.802872 | 4.564672e-49 | -8.615850e-47 |
| Msa0183830 | Msa0650090 | 0.843620 | 1.252457e-58 | -8.615850e-47 |
| Msa0186890 | Msa0650090 | 0.833065 | 6.605273e-56 | -8.615850e-47 |
| Msa0187690 | Msa0650090 | 0.822000 | 2.992916e-53 | -8.615850e-47 |
| Msa0187930 | Msa0650090 | 0.816364 | 5.745073e-52 | -8.615850e-47 |
| Msa0193120 | Msa0650090 | 0.806256 | 8.984437e-50 | -8.615850e-47 |
| Msa0194540 | Msa0650090 | 0.820841 | 5.542038e-53 | -8.615850e-47 |
| Msa0199880 | Msa0650090 | 0.805976 | 1.028944e-49 | -8.615850e-47 |
| Msa0203030 | Msa0650090 | 0.812765 | 3.595468e-51 | -8.615850e-47 |
| Msa0219190 | Msa0650090 | 0.822152 | 2.759702e-53 | -8.615850e-47 |
| Msa0223250 | Msa0650090 | 0.807602 | 4.664982e-50 | -8.615850e-47 |
| Msa0225740 | Msa0650090 | 0.806583 | 7.667357e-50 | -8.615850e-47 |
| Msa0230550 | Msa0650090 | -0.821365 | 4.197613e-53 | -8.615850e-47 |
| Msa0369050 | Msa0650090 | 0.806882 | 6.628192e-50 | -8.615850e-47 |
| Msa0395960 | Msa0650090 | 0.810302 | 1.233094e-50 | -8.615850e-47 |
| Msa0402330 | Msa0650090 | 0.820588 | 6.337428e-53 | -8.615850e-47 |
| Msa0410500 | Msa0650090 | 0.806643 | 7.444352e-50 | -8.615850e-47 |
| Msa0410650 | Msa0650090 | 0.807349 | 5.277843e-50 | -8.615850e-47 |
| Msa0413450 | Msa0650090 | 0.803118 | 4.059581e-49 | -8.615850e-47 |
| Msa0415580 | Msa0650090 | 0.832463 | 9.319400e-56 | -8.615850e-47 |
| Msa0417880 | Msa0650090 | 0.821289 | 4.371032e-53 | -8.615850e-47 |
| Msa0419820 | Msa0650090 | 0.819860 | 9.302844e-53 | -8.615850e-47 |
| Msa0422850 | Msa0650090 | 0.818763 | 1.654061e-52 | -8.615850e-47 |
| Msa0422930 | Msa0650090 | 0.815096 | 1.101484e-51 | -8.615850e-47 |
| Msa0425940 | Msa0650090 | 0.827612 | 1.421032e-54 | -8.615850e-47 |
| Msa0426020 | Msa0650090 | 0.805497 | 1.297664e-49 | -8.615850e-47 |
| Msa0426160 | Msa0650090 | 0.820717 | 5.919040e-53 | -8.615850e-47 |
| Msa0436460 | Msa0650090 | 0.806943 | 6.435296e-50 | -8.615850e-47 |
| Msa0441130 | Msa0650090 | 0.809262 | 2.064407e-50 | -8.615850e-47 |
| Msa0460660 | Msa0650090 | 0.814848 | 1.250232e-51 | -8.615850e-47 |
| Msa0461720 | Msa0650090 | 0.802443 | 5.597908e-49 | -8.615850e-47 |
| Msa0467300 | Msa0650090 | 0.813604 | 2.353561e-51 | -8.615850e-47 |
| Msa0469030 | Msa0650090 | 0.801778 | 7.669162e-49 | -8.615850e-47 |
| Msa0475790 | Msa0650090 | 0.829111 | 6.178246e-55 | -8.615850e-47 |
| Msa0238890 | Msa0650090 | 0.836919 | 7.055600e-57 | -8.615850e-47 |
| Msa0241780 | Msa0650090 | 0.813423 | 2.579298e-51 | -8.615850e-47 |
| Msa0241800 | Msa0650090 | 0.849503 | 3.101649e-60 | -8.615850e-47 |
| Msa0244780 | Msa0650090 | 0.812872 | 3.406808e-51 | -8.615850e-47 |
| Msa0264350 | Msa0650090 | 0.800886 | 1.167583e-48 | -8.615850e-47 |
| Msa0264570 | Msa0650090 | 0.820312 | 7.331757e-53 | -8.615850e-47 |
| Msa0267220 | Msa0650090 | 0.812128 | 4.955072e-51 | -8.615850e-47 |
| Msa0267760 | Msa0650090 | 0.819926 | 8.986905e-53 | -8.615850e-47 |
| Msa0268130 | Msa0650090 | 0.819327 | 1.230960e-52 | -8.615850e-47 |
| Msa0277180 | Msa0650090 | 0.801260 | 9.793213e-49 | -8.615850e-47 |
| Msa0277630 | Msa0650090 | 0.808834 | 2.549042e-50 | -8.615850e-47 |
| Msa0280610 | Msa0650090 | 0.802169 | 6.372432e-49 | -8.615850e-47 |
| Msa0280900 | Msa0650090 | 0.826279 | 2.960434e-54 | -8.615850e-47 |
| Msa0289890 | Msa0650090 | 0.811387 | 7.183084e-51 | -8.615850e-47 |
| Msa0292400 | Msa0650090 | 0.834023 | 3.808197e-56 | -8.615850e-47 |
| Msa0294390 | Msa0650090 | 0.849082 | 4.061491e-60 | -8.615850e-47 |
| Msa0298240 | Msa0650090 | 0.802240 | 6.162078e-49 | -8.615850e-47 |
| Msa0298990 | Msa0650090 | 0.816147 | 6.425023e-52 | -8.615850e-47 |
| Msa0302380 | Msa0650090 | 0.841015 | 6.139305e-58 | -8.615850e-47 |
| Msa0306300 | Msa0650090 | 0.806237 | 9.069260e-50 | -8.615850e-47 |
| Msa0308830 | Msa0650090 | 0.816725 | 4.769049e-52 | -8.615850e-47 |
| Msa0317310 | Msa0650090 | 0.808788 | 2.607018e-50 | -8.615850e-47 |
| Msa0332920 | Msa0650090 | 0.801692 | 7.988031e-49 | -8.615850e-47 |
| Msa0339640 | Msa0650090 | 0.803868 | 2.838222e-49 | -8.615850e-47 |
| Msa0355270 | Msa0650090 | 0.819259 | 1.275527e-52 | -8.615850e-47 |
| Msa0485990 | Msa0650090 | 0.802484 | 5.490085e-49 | -8.615850e-47 |
| Msa0507680 | Msa0650090 | 0.814230 | 1.712952e-51 | -8.615850e-47 |
| Msa0508590 | Msa0650090 | 0.815674 | 8.189278e-52 | -8.615850e-47 |
| Msa0508630 | Msa0650090 | 0.823045 | 1.711368e-53 | -8.615850e-47 |
| Msa0521880 | Msa0650090 | 0.816584 | 5.128232e-52 | -8.615850e-47 |
| Msa0526540 | Msa0650090 | 0.822619 | 2.150299e-53 | -8.615850e-47 |
| Msa0526710 | Msa0650090 | 0.813165 | 2.939086e-51 | -8.615850e-47 |
| Msa0527860 | Msa0650090 | 0.807914 | 4.003902e-50 | -8.615850e-47 |
| Msa0529680 | Msa0650090 | 0.801188 | 1.012832e-48 | -8.615850e-47 |
| Msa0541860 | Msa0650090 | 0.830938 | 2.214477e-55 | -8.615850e-47 |
| Msa0552810 | Msa0650090 | 0.804213 | 2.406045e-49 | -8.615850e-47 |
| Msa0555910 | Msa0650090 | 0.920258 | 1.606845e-87 | -8.615850e-47 |
| Msa0574890 | Msa0650090 | 0.832715 | 8.069596e-56 | -8.615850e-47 |
| Msa0576690 | Msa0650090 | 0.850612 | 1.517543e-60 | -8.615850e-47 |
| Msa0576940 | Msa0650090 | 0.825482 | 4.576438e-54 | -8.615850e-47 |
| Msa0586190 | Msa0650090 | 0.802374 | 5.782055e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0650090 | MtrunA17_Chr4g0042091 | 96.000 | 450 | 4 | 3 | 1 | 449 | 1 | 437 | 0.0 | 865 |
| Msa0650090 | MtrunA17_Chr2g0280501 | 43.519 | 432 | 184 | 10 | 21 | 448 | 1 | 376 | 8.38e-100 | 303 |
| Msa0650090 | MtrunA17_Chr1g0156521 | 38.426 | 432 | 191 | 12 | 22 | 446 | 35 | 398 | 3.27e-73 | 236 |
| Msa0650090 | MtrunA17_Chr3g0114991 | 51.653 | 242 | 103 | 7 | 212 | 446 | 214 | 448 | 1.02e-69 | 228 |
| Msa0650090 | MtrunA17_Chr3g0104431 | 45.267 | 243 | 110 | 9 | 217 | 446 | 154 | 386 | 3.58e-55 | 188 |
| Msa0650090 | MtrunA17_Chr8g0376191 | 56.213 | 169 | 70 | 3 | 280 | 448 | 1 | 165 | 1.14e-52 | 174 |
| Msa0650090 | MtrunA17_Chr2g0280521 | 58.824 | 119 | 49 | 0 | 244 | 362 | 8 | 126 | 6.05e-39 | 137 |
| Msa0650090 | MtrunA17_Chr5g0399041 | 34.375 | 224 | 94 | 7 | 239 | 448 | 105 | 289 | 7.38e-30 | 117 |
| Msa0650090 | MtrunA17_Chr4g0056461 | 35.238 | 210 | 100 | 6 | 242 | 448 | 98 | 274 | 2.36e-27 | 110 |
| Msa0650090 | MtrunA17_Chr5g0445321 | 30.928 | 194 | 120 | 5 | 255 | 446 | 1 | 182 | 1.81e-20 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0650090 | AT5G54630.1 | 69.697 | 462 | 96 | 12 | 21 | 448 | 20 | 471 | 0.0 | 589 |
| Msa0650090 | AT4G27240.1 | 64.679 | 436 | 117 | 6 | 18 | 448 | 27 | 430 | 0.0 | 530 |
| Msa0650090 | AT4G27240.2 | 63.235 | 408 | 113 | 6 | 18 | 420 | 27 | 402 | 7.01e-167 | 476 |
| Msa0650090 | AT1G11490.2 | 39.367 | 442 | 176 | 15 | 21 | 448 | 1 | 364 | 6.84e-78 | 247 |
| Msa0650090 | AT1G11490.1 | 39.367 | 442 | 176 | 15 | 21 | 448 | 1 | 364 | 6.84e-78 | 247 |
| Msa0650090 | AT1G75710.1 | 46.875 | 256 | 109 | 5 | 217 | 448 | 206 | 458 | 2.39e-61 | 206 |
| Msa0650090 | AT2G29660.1 | 41.634 | 257 | 125 | 7 | 209 | 446 | 120 | 370 | 2.53e-48 | 170 |
| Msa0650090 | AT4G22560.1 | 38.605 | 215 | 86 | 9 | 236 | 446 | 89 | 261 | 9.61e-29 | 114 |
| Msa0650090 | AT1G62520.1 | 38.863 | 211 | 96 | 7 | 240 | 448 | 100 | 279 | 4.47e-28 | 112 |
| Msa0650090 | AT4G12450.1 | 33.028 | 218 | 97 | 7 | 239 | 446 | 96 | 274 | 6.61e-23 | 98.6 |
Find 106 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATAACTTCATGAGTTAT+TGG | 0.157846 | 4_3:-56841724 | None:intergenic |
| AAAAGAAGAAGAAGCATTAA+AGG | 0.207612 | 4_3:+56841444 | Msa0650090:CDS |
| AAAATGATGGTACAAATTTA+TGG | 0.233151 | 4_3:+56843596 | Msa0650090:three_prime_UTR |
| TCAAACTGGATTTGATTCTT+TGG | 0.236240 | 4_3:+56843061 | Msa0650090:CDS |
| CTTGGCAGTTACTGAACTTT+TGG | 0.259869 | 4_3:+56842539 | Msa0650090:intron |
| GTTTGGATTCACGGTGAATT+TGG | 0.266400 | 4_3:+56843209 | Msa0650090:three_prime_UTR |
| AAAATTACAAATGTATGAAT+AGG | 0.295551 | 4_3:-56843485 | None:intergenic |
| AAATTACAAATGTATGAATA+GGG | 0.307168 | 4_3:-56843484 | None:intergenic |
| GACACCTAGGATGTTTCTTC+TGG | 0.309460 | 4_3:-56842731 | None:intergenic |
| AAGTCACTTGTGCTTGTTCA+TGG | 0.370609 | 4_3:+56843440 | Msa0650090:three_prime_UTR |
| GTCACAACTAGAAATAAATA+TGG | 0.370687 | 4_3:+56843564 | Msa0650090:three_prime_UTR |
| GAACAAGCAAATGAGACAAA+AGG | 0.375170 | 4_3:-56841223 | None:intergenic |
| GGGTTAAAGTAATGCATTGT+AGG | 0.377644 | 4_3:-56841895 | None:intergenic |
| GCTTGTTCTCTTGGTCTCAA+TGG | 0.382256 | 4_3:+56842798 | Msa0650090:CDS |
| TCTCTTGAAACAGATTCTAA+TGG | 0.386384 | 4_3:+56842021 | Msa0650090:CDS |
| GGTAAGTTCGACAAAATTAC+AGG | 0.400154 | 4_3:-56843293 | None:intergenic |
| AGAAGAGCACAGAATGAGTT+AGG | 0.403969 | 4_3:-56841252 | None:intergenic |
| AAAATATTTACCAGCATGCT+TGG | 0.405089 | 4_3:-56842118 | None:intergenic |
| ACCACGGTAGCTTGTTCTCT+TGG | 0.405621 | 4_3:+56842789 | Msa0650090:CDS |
| AAGGAGTTGAAAGGTGGAAT+AGG | 0.409316 | 4_3:+56842891 | Msa0650090:CDS |
| GTTGTGTTTGTAGAATCATT+AGG | 0.411461 | 4_3:+56842850 | Msa0650090:CDS |
| TAATTGCTGGTAGGGTTCAT+AGG | 0.416479 | 4_3:+56843009 | Msa0650090:CDS |
| ATCAACGTGTTGACACGGTT+TGG | 0.417052 | 4_3:+56843192 | Msa0650090:three_prime_UTR |
| AAAGAAGAAGAAGCATTAAA+GGG | 0.417589 | 4_3:+56841445 | Msa0650090:CDS |
| ACTGGATTTGATTCTTTGGC+TGG | 0.418812 | 4_3:+56843065 | Msa0650090:CDS |
| GTTGACACGGTTTGGATTCA+CGG | 0.421092 | 4_3:+56843200 | Msa0650090:three_prime_UTR |
| CAAGAAATGGCATCTCAAAC+TGG | 0.425597 | 4_3:+56843047 | Msa0650090:CDS |
| GTGGTGTTCATTCAAGTAAT+AGG | 0.426313 | 4_3:+56841995 | Msa0650090:CDS |
| AAAAGAAAAGGTGATTTCCT+TGG | 0.433309 | 4_3:-56841943 | None:intergenic |
| GTATAAGAAGAAAACCAAAA+AGG | 0.435847 | 4_3:+56841414 | Msa0650090:CDS |
| ACTTGAAAACATTCAAGAAA+TGG | 0.445655 | 4_3:+56843034 | Msa0650090:CDS |
| GTGGTGAACAGTTTAACAAA+TGG | 0.446542 | 4_3:+56842070 | Msa0650090:CDS |
| TAATGAACCTTCACTTAGAA+AGG | 0.446634 | 4_3:+56842968 | Msa0650090:CDS |
| CCTCCAGGACCAGGTGTACC+AGG | 0.455632 | 4_3:-56841868 | None:intergenic |
| TCACTGCTTCCTATAGATCT+TGG | 0.456992 | 4_3:-56841691 | None:intergenic |
| GATTCTTTGGCTGGTAAAGT+AGG | 0.457682 | 4_3:+56843074 | Msa0650090:CDS |
| GTTGAAGAAGTCCTAAAAGA+AGG | 0.458747 | 4_3:-56841916 | None:intergenic |
| AGTTGCAGTCCAAGATCTAT+AGG | 0.459011 | 4_3:+56841682 | Msa0650090:CDS |
| TTCCTTCAACCATGCATGAA+AGG | 0.460121 | 4_3:-56841285 | None:intergenic |
| ACCCTTTCATGCATGGTTGA+AGG | 0.463554 | 4_3:+56841283 | Msa0650090:five_prime_UTR |
| ATGCAGAGTAATTGCTGGTA+GGG | 0.484307 | 4_3:+56843001 | Msa0650090:CDS |
| TCCTTCAACCATGCATGAAA+GGG | 0.490073 | 4_3:-56841284 | None:intergenic |
| TACCAGCATGCTTGGAGAGA+TGG | 0.491155 | 4_3:-56842110 | None:intergenic |
| GGTGGTTCTTCAACTTATGT+TGG | 0.492368 | 4_3:+56841835 | Msa0650090:CDS |
| ATGGAAGACTTGTAAAATGA+TGG | 0.496180 | 4_3:+56843583 | Msa0650090:three_prime_UTR |
| ATAGTATGCAGAGTAATTGC+TGG | 0.496317 | 4_3:+56842996 | Msa0650090:CDS |
| TGAGATAACCCTTTCATGCA+TGG | 0.497101 | 4_3:+56841276 | Msa0650090:five_prime_UTR |
| TGGTGAACAGTTTAACAAAT+GGG | 0.498621 | 4_3:+56842071 | Msa0650090:CDS |
| GAGGAAGATCAGGTTGTTCA+AGG | 0.499461 | 4_3:+56841599 | Msa0650090:CDS |
| GACCCTTCTGACAAAAGAAA+AGG | 0.499545 | 4_3:-56841955 | None:intergenic |
| ATCAATGCCTTTCTAAGTGA+AGG | 0.505745 | 4_3:-56842975 | None:intergenic |
| AACAAGCAAATGAGACAAAA+GGG | 0.510696 | 4_3:-56841222 | None:intergenic |
| AATTACAAATGTATGAATAG+GGG | 0.510948 | 4_3:-56843483 | None:intergenic |
| GATCTTGGACTGCAACTTGG+TGG | 0.516239 | 4_3:-56841676 | None:intergenic |
| TTTGGATCATGTACATCTGA+TGG | 0.518690 | 4_3:-56841523 | None:intergenic |
| TGCATTGTAGGGTGTCCTCC+AGG | 0.520201 | 4_3:-56841883 | None:intergenic |
| CATCCTAGGTGTCTAGCTGA+TGG | 0.521265 | 4_3:+56842741 | Msa0650090:CDS |
| CAAAATCCTTCAAAAGATGT+AGG | 0.522430 | 4_3:-56843404 | None:intergenic |
| CACCATCTCTCCAAGCATGC+TGG | 0.523843 | 4_3:+56842108 | Msa0650090:CDS |
| AAACAAGGAAGAAGAGCTCT+AGG | 0.526190 | 4_3:-56843134 | None:intergenic |
| TTCAAAGAAAACCACACTGT+TGG | 0.527957 | 4_3:-56841475 | None:intergenic |
| AACTAGATTTCCAACTTCCA+AGG | 0.529920 | 4_3:-56841388 | None:intergenic |
| AAATTATATGCAGGACAAGC+TGG | 0.530091 | 4_3:+56842589 | Msa0650090:CDS |
| AGGTCTTTATTCAAACATTG+AGG | 0.530157 | 4_3:+56843094 | Msa0650090:CDS |
| AGATTCATCAAGGAAAATAG+TGG | 0.534245 | 4_3:+56842566 | Msa0650090:CDS |
| GTAGGGTGTCCTCCAGGACC+AGG | 0.534778 | 4_3:-56841877 | None:intergenic |
| AATCTAAAAGATGTTATCCA+TGG | 0.536862 | 4_3:+56841631 | Msa0650090:CDS |
| AGAAAAGGTGATTTCCTTGG+AGG | 0.540659 | 4_3:-56841940 | None:intergenic |
| AGACCTGGTACACCTGGTCC+TGG | 0.541493 | 4_3:+56841865 | Msa0650090:CDS |
| ATAGATCTTGGACTGCAACT+TGG | 0.545029 | 4_3:-56841679 | None:intergenic |
| CACAACATCTACAAGTGGAA+GGG | 0.551250 | 4_3:+56842920 | Msa0650090:CDS |
| GGTTAAAGTAATGCATTGTA+GGG | 0.557734 | 4_3:-56841894 | None:intergenic |
| GGACTTCTTCAACTCCTCCA+AGG | 0.558541 | 4_3:+56841926 | Msa0650090:CDS |
| TATGCAGAGTAATTGCTGGT+AGG | 0.562940 | 4_3:+56843000 | Msa0650090:CDS |
| ACTTTAAGACCTGGTACACC+TGG | 0.565382 | 4_3:+56841859 | Msa0650090:CDS |
| TCACAACATCTACAAGTGGA+AGG | 0.571126 | 4_3:+56842919 | Msa0650090:CDS |
| AACTCCAGAAGAAACATCCT+AGG | 0.571187 | 4_3:+56842727 | Msa0650090:CDS |
| AAATAGTGGAAATTATATGC+AGG | 0.573880 | 4_3:+56842580 | Msa0650090:CDS |
| TTGAAGAAGTCCTAAAAGAA+GGG | 0.580726 | 4_3:-56841915 | None:intergenic |
| TATGTTGGTACTTTAAGACC+TGG | 0.582691 | 4_3:+56841850 | Msa0650090:CDS |
| ATTACAAATGTATGAATAGG+GGG | 0.584110 | 4_3:-56843482 | None:intergenic |
| TCTGCTAAGAAGGAGTTGAA+AGG | 0.586835 | 4_3:+56842882 | Msa0650090:CDS |
| CAAGAAGGGATTAACAGTGG+TGG | 0.589162 | 4_3:+56841784 | Msa0650090:CDS |
| ATTTGAAGAGTACAGAGAGA+TGG | 0.595060 | 4_3:+56842686 | Msa0650090:CDS |
| GTTTGTAGAATCATTAGGAG+TGG | 0.602627 | 4_3:+56842855 | Msa0650090:CDS |
| ACAGGATCAACGTGTTGACA+CGG | 0.607146 | 4_3:+56843187 | Msa0650090:three_prime_UTR |
| TTGCAAATTACCACAAAACA+AGG | 0.607767 | 4_3:-56843149 | None:intergenic |
| TTTCCATCAGCTAGACACCT+AGG | 0.608502 | 4_3:-56842744 | None:intergenic |
| GCTAAGAAGGAGTTGAAAGG+TGG | 0.609494 | 4_3:+56842885 | Msa0650090:CDS |
| AGCAAATGAGACAAAAGGGA+GGG | 0.610198 | 4_3:-56841218 | None:intergenic |
| TTAGAGTTTCAACAAAATCA+CGG | 0.615481 | 4_3:+56843266 | Msa0650090:three_prime_UTR |
| CTCTCTCTATTCTGCCACAG+TGG | 0.632803 | 4_3:-56842626 | None:intergenic |
| GCTAGTGGTGGTAGTAGTAG+TGG | 0.635609 | 4_3:+56841814 | Msa0650090:CDS |
| TTTCAAGAAGGGATTAACAG+TGG | 0.654520 | 4_3:+56841781 | Msa0650090:CDS |
| AGCAAAGAGAAAGAGAAACA+TGG | 0.658530 | 4_3:+56841350 | Msa0650090:five_prime_UTR |
| AGTGGTGGTAGTAGTAGTGG+TGG | 0.661261 | 4_3:+56841817 | Msa0650090:CDS |
| CCTGGTACACCTGGTCCTGG+AGG | 0.665004 | 4_3:+56841868 | Msa0650090:CDS |
| ACCAAGAGAACAAGCTACCG+TGG | 0.687115 | 4_3:-56842790 | None:intergenic |
| ACTGTTACTTGTCACAAATG+TGG | 0.687396 | 4_3:+56842051 | Msa0650090:CDS |
| AAGCAAATGAGACAAAAGGG+AGG | 0.691742 | 4_3:-56841219 | None:intergenic |
| TTTACGGTTCTATGGAACCA+CGG | 0.693935 | 4_3:+56842773 | Msa0650090:CDS |
| AGGGTAATATGCCAACAGTG+TGG | 0.706544 | 4_3:+56841464 | Msa0650090:CDS |
| GTAAGTTCGACAAAATTACA+GGG | 0.709409 | 4_3:-56843292 | None:intergenic |
| GGTGGTAACAATGCTAGTGG+TGG | 0.732313 | 4_3:+56841802 | Msa0650090:CDS |
| AGTGGTGGTAACAATGCTAG+TGG | 0.733810 | 4_3:+56841799 | Msa0650090:CDS |
| TTAAAGTCAGAAAACCACTG+TGG | 0.819817 | 4_3:+56842612 | Msa0650090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTAAAAATTCTTCT+TGG | + | chr4_3:56842139-56842158 | Msa0650090:intron | 10.0% |
| !!! | ATTTTATTTTCAAAATATCT+AGG | + | chr4_3:56842355-56842374 | Msa0650090:intron | 10.0% |
| !!! | TATGCTATAGAATTTTTTTA+TGG | + | chr4_3:56842221-56842240 | Msa0650090:intron | 15.0% |
| !! | CAAACAATTCTAAATTAAAA+AGG | - | chr4_3:56842322-56842341 | None:intergenic | 15.0% |
| !!! | ATTTTGAAAATAAAATCTGT+TGG | - | chr4_3:56842351-56842370 | None:intergenic | 15.0% |
| !! | AAATTACAAATGTATGAATA+GGG | - | chr4_3:56843487-56843506 | None:intergenic | 15.0% |
| !! | AAAATTACAAATGTATGAAT+AGG | - | chr4_3:56843488-56843507 | None:intergenic | 15.0% |
| !! | AAAATAACTTCATGAGTTAT+TGG | - | chr4_3:56841727-56841746 | None:intergenic | 20.0% |
| !! | AATTCTAAATTAAAAAGGCA+TGG | - | chr4_3:56842317-56842336 | None:intergenic | 20.0% |
| !! | AATTACAAATGTATGAATAG+GGG | - | chr4_3:56843486-56843505 | None:intergenic | 20.0% |
| !! | AAAATGATGGTACAAATTTA+TGG | + | chr4_3:56843596-56843615 | Msa0650090:three_prime_UTR | 20.0% |
| ! | AGATGTATAGTAAAAAACAC+GGG | - | chr4_3:56841198-56841217 | None:intergenic | 25.0% |
| ! | GAGATGTATAGTAAAAAACA+CGG | - | chr4_3:56841199-56841218 | None:intergenic | 25.0% |
| ! | GTATAAGAAGAAAACCAAAA+AGG | + | chr4_3:56841414-56841433 | Msa0650090:CDS | 25.0% |
| !! | TTCTTTTCTTTCTACCTTTT+TGG | - | chr4_3:56841431-56841450 | None:intergenic | 25.0% |
| !!! | AAAAGAAGAAGAAGCATTAA+AGG | + | chr4_3:56841444-56841463 | Msa0650090:CDS | 25.0% |
| !!! | AAAGAAGAAGAAGCATTAAA+GGG | + | chr4_3:56841445-56841464 | Msa0650090:CDS | 25.0% |
| ! | AGCACAATCTTAACAAAAAA+AGG | + | chr4_3:56841562-56841581 | Msa0650090:CDS | 25.0% |
| ! | ACAATCTTAACAAAAAAAGG+AGG | + | chr4_3:56841565-56841584 | Msa0650090:CDS | 25.0% |
| ! | AATCTAAAAGATGTTATCCA+TGG | + | chr4_3:56841631-56841650 | Msa0650090:CDS | 25.0% |
| !!! | AAGTTATTTTGAGTAACTCA+AGG | + | chr4_3:56841737-56841756 | Msa0650090:CDS | 25.0% |
| !! | ATTACTTTAACCCTTCTTTT+AGG | + | chr4_3:56841905-56841924 | Msa0650090:CDS | 25.0% |
| !! | TAAAAATTCTTCTTGGCTTT+AGG | + | chr4_3:56842146-56842165 | Msa0650090:intron | 25.0% |
| ! | TTTGTGGTCAGAAAAATATT+TGG | - | chr4_3:56842176-56842195 | None:intergenic | 25.0% |
| !!! | GCTATAGAATTTTTTTATGG+TGG | + | chr4_3:56842224-56842243 | Msa0650090:intron | 25.0% |
| !!! | AAATCCACACTTTTTGAATT+TGG | + | chr4_3:56842266-56842285 | Msa0650090:intron | 25.0% |
| !!! | AATCCACACTTTTTGAATTT+GGG | + | chr4_3:56842267-56842286 | Msa0650090:intron | 25.0% |
| ! | AATACTAGGATAAAGTAGAT+TGG | - | chr4_3:56842407-56842426 | None:intergenic | 25.0% |
| !!! | AGAAAAATTTGTTTTTCCCT+TGG | + | chr4_3:56842521-56842540 | Msa0650090:intron | 25.0% |
| !! | AAATAGTGGAAATTATATGC+AGG | + | chr4_3:56842580-56842599 | Msa0650090:CDS | 25.0% |
| !!! | CTAAAGTTTTTTGCATATTG+TGG | - | chr4_3:56842662-56842681 | None:intergenic | 25.0% |
| !!! | ATTTCTTGAATGTTTTCAAG+TGG | - | chr4_3:56843035-56843054 | None:intergenic | 25.0% |
| ! | ACTTGAAAACATTCAAGAAA+TGG | + | chr4_3:56843034-56843053 | Msa0650090:CDS | 25.0% |
| ! | TTAGAGTTTCAACAAAATCA+CGG | + | chr4_3:56843266-56843285 | Msa0650090:three_prime_UTR | 25.0% |
| ! | CCATATAAAAGCCAAAAATA+GGG | - | chr4_3:56843373-56843392 | None:intergenic | 25.0% |
| ! | TCCATATAAAAGCCAAAAAT+AGG | - | chr4_3:56843374-56843393 | None:intergenic | 25.0% |
| !!! | TATTTTTGGCTTTTATATGG+AGG | + | chr4_3:56843373-56843392 | Msa0650090:three_prime_UTR | 25.0% |
| ! | ATTACAAATGTATGAATAGG+GGG | - | chr4_3:56843485-56843504 | None:intergenic | 25.0% |
| !! | TTGTGACAATTCAAATTTTC+TGG | - | chr4_3:56843551-56843570 | None:intergenic | 25.0% |
| ! | GTCACAACTAGAAATAAATA+TGG | + | chr4_3:56843564-56843583 | Msa0650090:three_prime_UTR | 25.0% |
| AACAAGCAAATGAGACAAAA+GGG | - | chr4_3:56841225-56841244 | None:intergenic | 30.0% | |
| ATGTACATGATCCAAAAACA+AGG | + | chr4_3:56841530-56841549 | Msa0650090:CDS | 30.0% | |
| !!! | CTTAAATGCTTCCTTGTTTT+TGG | - | chr4_3:56841544-56841563 | None:intergenic | 30.0% |
| ATCTTAACAAAAAAAGGAGG+AGG | + | chr4_3:56841568-56841587 | Msa0650090:CDS | 30.0% | |
| !!! | AAAATCACTGGTTTTCAAGA+AGG | + | chr4_3:56841769-56841788 | Msa0650090:CDS | 30.0% |
| !!! | AAATCACTGGTTTTCAAGAA+GGG | + | chr4_3:56841770-56841789 | Msa0650090:CDS | 30.0% |
| GGTTAAAGTAATGCATTGTA+GGG | - | chr4_3:56841897-56841916 | None:intergenic | 30.0% | |
| TTGAAGAAGTCCTAAAAGAA+GGG | - | chr4_3:56841918-56841937 | None:intergenic | 30.0% | |
| AAAAGAAAAGGTGATTTCCT+TGG | - | chr4_3:56841946-56841965 | None:intergenic | 30.0% | |
| TCTCTTGAAACAGATTCTAA+TGG | + | chr4_3:56842021-56842040 | Msa0650090:CDS | 30.0% | |
| TGGTGAACAGTTTAACAAAT+GGG | + | chr4_3:56842071-56842090 | Msa0650090:CDS | 30.0% | |
| AAAATATTTACCAGCATGCT+TGG | - | chr4_3:56842121-56842140 | None:intergenic | 30.0% | |
| ! | TTTTCTGACCACAAACTTTT+TGG | + | chr4_3:56842181-56842200 | Msa0650090:intron | 30.0% |
| AGCATATCAGATAAAGACTA+TGG | - | chr4_3:56842207-56842226 | None:intergenic | 30.0% | |
| GGATAAAGTAGATTGGAAAA+GGG | - | chr4_3:56842400-56842419 | None:intergenic | 30.0% | |
| AGGATAAAGTAGATTGGAAA+AGG | - | chr4_3:56842401-56842420 | None:intergenic | 30.0% | |
| TGTTCAATGTTCACAATACT+AGG | - | chr4_3:56842421-56842440 | None:intergenic | 30.0% | |
| AGATTCATCAAGGAAAATAG+TGG | + | chr4_3:56842566-56842585 | Msa0650090:CDS | 30.0% | |
| !! | CAGAATAGAGAGAGTTTTAA+AGG | + | chr4_3:56842635-56842654 | Msa0650090:CDS | 30.0% |
| ! | CTGATGGAAATGAACTTTTA+CGG | + | chr4_3:56842757-56842776 | Msa0650090:CDS | 30.0% |
| ! | AATGAACTTTTACGGTTCTA+TGG | + | chr4_3:56842765-56842784 | Msa0650090:CDS | 30.0% |
| GTTGTGTTTGTAGAATCATT+AGG | + | chr4_3:56842850-56842869 | Msa0650090:CDS | 30.0% | |
| TAATGAACCTTCACTTAGAA+AGG | + | chr4_3:56842968-56842987 | Msa0650090:CDS | 30.0% | |
| TCAAACTGGATTTGATTCTT+TGG | + | chr4_3:56843061-56843080 | Msa0650090:CDS | 30.0% | |
| AGGTCTTTATTCAAACATTG+AGG | + | chr4_3:56843094-56843113 | Msa0650090:CDS | 30.0% | |
| TTGCAAATTACCACAAAACA+AGG | - | chr4_3:56843152-56843171 | None:intergenic | 30.0% | |
| GTAAGTTCGACAAAATTACA+GGG | - | chr4_3:56843295-56843314 | None:intergenic | 30.0% | |
| !! | TAAGTGCATGTTTTGAATGA+CGG | - | chr4_3:56843317-56843336 | None:intergenic | 30.0% |
| !!! | CCCTATTTTTGGCTTTTATA+TGG | + | chr4_3:56843370-56843389 | Msa0650090:three_prime_UTR | 30.0% |
| CAAAATCCTTCAAAAGATGT+AGG | - | chr4_3:56843407-56843426 | None:intergenic | 30.0% | |
| ATGGAAGACTTGTAAAATGA+TGG | + | chr4_3:56843583-56843602 | Msa0650090:three_prime_UTR | 30.0% | |
| GAACAAGCAAATGAGACAAA+AGG | - | chr4_3:56841226-56841245 | None:intergenic | 35.0% | |
| AGCAAAGAGAAAGAGAAACA+TGG | + | chr4_3:56841350-56841369 | Msa0650090:five_prime_UTR | 35.0% | |
| !!! | CTTCCAAGGCTTTTTCAAAA+GGG | - | chr4_3:56841377-56841396 | None:intergenic | 35.0% |
| !!! | ACTTCCAAGGCTTTTTCAAA+AGG | - | chr4_3:56841378-56841397 | None:intergenic | 35.0% |
| TTTGAAAAAGCCTTGGAAGT+TGG | + | chr4_3:56841378-56841397 | Msa0650090:five_prime_UTR | 35.0% | |
| AACTAGATTTCCAACTTCCA+AGG | - | chr4_3:56841391-56841410 | None:intergenic | 35.0% | |
| TTCAAAGAAAACCACACTGT+TGG | - | chr4_3:56841478-56841497 | None:intergenic | 35.0% | |
| TTTGGATCATGTACATCTGA+TGG | - | chr4_3:56841526-56841545 | None:intergenic | 35.0% | |
| TTAACAAAAAAAGGAGGAGG+AGG | + | chr4_3:56841571-56841590 | Msa0650090:CDS | 35.0% | |
| ! | CAATATGTCTTTTGCTTCCA+TGG | - | chr4_3:56841651-56841670 | None:intergenic | 35.0% |
| AGGTGTGAGTTAAAAATCAC+TGG | + | chr4_3:56841757-56841776 | Msa0650090:CDS | 35.0% | |
| TTTCAAGAAGGGATTAACAG+TGG | + | chr4_3:56841781-56841800 | Msa0650090:CDS | 35.0% | |
| !! | TATGTTGGTACTTTAAGACC+TGG | + | chr4_3:56841850-56841869 | Msa0650090:CDS | 35.0% |
| GGGTTAAAGTAATGCATTGT+AGG | - | chr4_3:56841898-56841917 | None:intergenic | 35.0% | |
| GTTGAAGAAGTCCTAAAAGA+AGG | - | chr4_3:56841919-56841938 | None:intergenic | 35.0% | |
| ! | TCACCTTTTCTTTTGTCAGA+AGG | + | chr4_3:56841952-56841971 | Msa0650090:CDS | 35.0% |
| ! | CACCTTTTCTTTTGTCAGAA+GGG | + | chr4_3:56841953-56841972 | Msa0650090:CDS | 35.0% |
| GTGGTGTTCATTCAAGTAAT+AGG | + | chr4_3:56841995-56842014 | Msa0650090:CDS | 35.0% | |
| ! | ACTGTTACTTGTCACAAATG+TGG | + | chr4_3:56842051-56842070 | Msa0650090:CDS | 35.0% |
| GTGGTGAACAGTTTAACAAA+TGG | + | chr4_3:56842070-56842089 | Msa0650090:CDS | 35.0% | |
| AGTCCCAAATTCAAAAAGTG+TGG | - | chr4_3:56842273-56842292 | None:intergenic | 35.0% | |
| AAAAGTTCAGTAACTGCCAA+GGG | - | chr4_3:56842540-56842559 | None:intergenic | 35.0% | |
| !! | TTTTGGAAGGAGATTCATCA+AGG | + | chr4_3:56842556-56842575 | Msa0650090:CDS | 35.0% |
| AAATTATATGCAGGACAAGC+TGG | + | chr4_3:56842589-56842608 | Msa0650090:CDS | 35.0% | |
| TTAAAGTCAGAAAACCACTG+TGG | + | chr4_3:56842612-56842631 | Msa0650090:CDS | 35.0% | |
| ! | ATTTGAAGAGTACAGAGAGA+TGG | + | chr4_3:56842686-56842705 | Msa0650090:CDS | 35.0% |
| GTTTGTAGAATCATTAGGAG+TGG | + | chr4_3:56842855-56842874 | Msa0650090:CDS | 35.0% | |
| ! | GTTTTCACAACATCTACAAG+TGG | + | chr4_3:56842915-56842934 | Msa0650090:CDS | 35.0% |
| ATCAATGCCTTTCTAAGTGA+AGG | - | chr4_3:56842978-56842997 | None:intergenic | 35.0% | |
| ATAGTATGCAGAGTAATTGC+TGG | + | chr4_3:56842996-56843015 | Msa0650090:CDS | 35.0% | |
| CAAATCATGAACCCAAAAAC+AGG | + | chr4_3:56843169-56843188 | Msa0650090:exon | 35.0% | |
| !! | AACACGTTGATCCTGTTTTT+GGG | - | chr4_3:56843183-56843202 | None:intergenic | 35.0% |
| GGTAAGTTCGACAAAATTAC+AGG | - | chr4_3:56843296-56843315 | None:intergenic | 35.0% | |
| AAAAGCCAAAAATAGGGTAG+TGG | - | chr4_3:56843367-56843386 | None:intergenic | 35.0% | |
| !!! | GCTTTTATATGGAGGTACTA+TGG | + | chr4_3:56843381-56843400 | Msa0650090:three_prime_UTR | 35.0% |
| AGCAAATGAGACAAAAGGGA+GGG | - | chr4_3:56841221-56841240 | None:intergenic | 40.0% | |
| AAGCAAATGAGACAAAAGGG+AGG | - | chr4_3:56841222-56841241 | None:intergenic | 40.0% | |
| ! | AGAAGAGCACAGAATGAGTT+AGG | - | chr4_3:56841255-56841274 | None:intergenic | 40.0% |
| TGAGATAACCCTTTCATGCA+TGG | + | chr4_3:56841276-56841295 | Msa0650090:five_prime_UTR | 40.0% | |
| TCCTTCAACCATGCATGAAA+GGG | - | chr4_3:56841287-56841306 | None:intergenic | 40.0% | |
| TTCCTTCAACCATGCATGAA+AGG | - | chr4_3:56841288-56841307 | None:intergenic | 40.0% | |
| ATAGATCTTGGACTGCAACT+TGG | - | chr4_3:56841682-56841701 | None:intergenic | 40.0% | |
| AGTTGCAGTCCAAGATCTAT+AGG | + | chr4_3:56841682-56841701 | Msa0650090:CDS | 40.0% | |
| TCACTGCTTCCTATAGATCT+TGG | - | chr4_3:56841694-56841713 | None:intergenic | 40.0% | |
| GGTGGTTCTTCAACTTATGT+TGG | + | chr4_3:56841835-56841854 | Msa0650090:CDS | 40.0% | |
| AGAAAAGGTGATTTCCTTGG+AGG | - | chr4_3:56841943-56841962 | None:intergenic | 40.0% | |
| GACCCTTCTGACAAAAGAAA+AGG | - | chr4_3:56841958-56841977 | None:intergenic | 40.0% | |
| ! | CTTTTGTCAGAAGGGTCTAA+TGG | + | chr4_3:56841961-56841980 | Msa0650090:CDS | 40.0% |
| ! | GAAGGGTCTAATGGTTTTCA+TGG | + | chr4_3:56841970-56841989 | Msa0650090:CDS | 40.0% |
| ! | TCTAATGGTTTTCATGGTGG+TGG | + | chr4_3:56841976-56841995 | Msa0650090:CDS | 40.0% |
| GACTATGGCCAAAAAGTTTG+TGG | - | chr4_3:56842192-56842211 | None:intergenic | 40.0% | |
| CAAAAGTTCAGTAACTGCCA+AGG | - | chr4_3:56842541-56842560 | None:intergenic | 40.0% | |
| ! | CTTGGCAGTTACTGAACTTT+TGG | + | chr4_3:56842539-56842558 | Msa0650090:intron | 40.0% |
| ! | GCAGTTACTGAACTTTTGGA+AGG | + | chr4_3:56842543-56842562 | Msa0650090:intron | 40.0% |
| AACTCCAGAAGAAACATCCT+AGG | + | chr4_3:56842727-56842746 | Msa0650090:CDS | 40.0% | |
| TTTACGGTTCTATGGAACCA+CGG | + | chr4_3:56842773-56842792 | Msa0650090:CDS | 40.0% | |
| ! | GAGTGGTTTTTCTGCTAAGA+AGG | + | chr4_3:56842872-56842891 | Msa0650090:CDS | 40.0% |
| TCTGCTAAGAAGGAGTTGAA+AGG | + | chr4_3:56842882-56842901 | Msa0650090:CDS | 40.0% | |
| AAGGAGTTGAAAGGTGGAAT+AGG | + | chr4_3:56842891-56842910 | Msa0650090:CDS | 40.0% | |
| TCACAACATCTACAAGTGGA+AGG | + | chr4_3:56842919-56842938 | Msa0650090:CDS | 40.0% | |
| CACAACATCTACAAGTGGAA+GGG | + | chr4_3:56842920-56842939 | Msa0650090:CDS | 40.0% | |
| TATGCAGAGTAATTGCTGGT+AGG | + | chr4_3:56843000-56843019 | Msa0650090:CDS | 40.0% | |
| ATGCAGAGTAATTGCTGGTA+GGG | + | chr4_3:56843001-56843020 | Msa0650090:CDS | 40.0% | |
| TAATTGCTGGTAGGGTTCAT+AGG | + | chr4_3:56843009-56843028 | Msa0650090:CDS | 40.0% | |
| CAAGAAATGGCATCTCAAAC+TGG | + | chr4_3:56843047-56843066 | Msa0650090:CDS | 40.0% | |
| ACTGGATTTGATTCTTTGGC+TGG | + | chr4_3:56843065-56843084 | Msa0650090:CDS | 40.0% | |
| GATTCTTTGGCTGGTAAAGT+AGG | + | chr4_3:56843074-56843093 | Msa0650090:CDS | 40.0% | |
| AAACAAGGAAGAAGAGCTCT+AGG | - | chr4_3:56843137-56843156 | None:intergenic | 40.0% | |
| !!! | AGCTCTTCTTCCTTGTTTTG+TGG | + | chr4_3:56843139-56843158 | Msa0650090:CDS | 40.0% |
| ! | CAACACGTTGATCCTGTTTT+TGG | - | chr4_3:56843184-56843203 | None:intergenic | 40.0% |
| GTTTGGATTCACGGTGAATT+TGG | + | chr4_3:56843209-56843228 | Msa0650090:three_prime_UTR | 40.0% | |
| ! | CAAAAATAGGGTAGTGGTAG+TGG | - | chr4_3:56843361-56843380 | None:intergenic | 40.0% |
| ! | CACTACCACTACCCTATTTT+TGG | + | chr4_3:56843359-56843378 | Msa0650090:three_prime_UTR | 40.0% |
| ! | CTATGGCCTACATCTTTTGA+AGG | + | chr4_3:56843398-56843417 | Msa0650090:three_prime_UTR | 40.0% |
| AAGTCACTTGTGCTTGTTCA+TGG | + | chr4_3:56843440-56843459 | Msa0650090:three_prime_UTR | 40.0% | |
| ACCCTTTCATGCATGGTTGA+AGG | + | chr4_3:56841283-56841302 | Msa0650090:five_prime_UTR | 45.0% | |
| !! | GGACCCTTTTGAAAAAGCCT+TGG | + | chr4_3:56841371-56841390 | Msa0650090:five_prime_UTR | 45.0% |
| AGGGTAATATGCCAACAGTG+TGG | + | chr4_3:56841464-56841483 | Msa0650090:CDS | 45.0% | |
| ACAAAAAAAGGAGGAGGAGG+AGG | + | chr4_3:56841574-56841593 | Msa0650090:CDS | 45.0% | |
| ! | GAGGAAGATCAGGTTGTTCA+AGG | + | chr4_3:56841599-56841618 | Msa0650090:CDS | 45.0% |
| CAAGAAGGGATTAACAGTGG+TGG | + | chr4_3:56841784-56841803 | Msa0650090:CDS | 45.0% | |
| AGTGGTGGTAACAATGCTAG+TGG | + | chr4_3:56841799-56841818 | Msa0650090:CDS | 45.0% | |
| !! | ACTTTAAGACCTGGTACACC+TGG | + | chr4_3:56841859-56841878 | Msa0650090:CDS | 45.0% |
| ! | GGGTCTAATGGTTTTCATGG+TGG | + | chr4_3:56841973-56841992 | Msa0650090:CDS | 45.0% |
| GACACCTAGGATGTTTCTTC+TGG | - | chr4_3:56842734-56842753 | None:intergenic | 45.0% | |
| TTTCCATCAGCTAGACACCT+AGG | - | chr4_3:56842747-56842766 | None:intergenic | 45.0% | |
| GCTTGTTCTCTTGGTCTCAA+TGG | + | chr4_3:56842798-56842817 | Msa0650090:CDS | 45.0% | |
| GCTAAGAAGGAGTTGAAAGG+TGG | + | chr4_3:56842885-56842904 | Msa0650090:CDS | 45.0% | |
| ! | ACAGGATCAACGTGTTGACA+CGG | + | chr4_3:56843187-56843206 | Msa0650090:three_prime_UTR | 45.0% |
| ! | ATCAACGTGTTGACACGGTT+TGG | + | chr4_3:56843192-56843211 | Msa0650090:three_prime_UTR | 45.0% |
| ! | GTTGACACGGTTTGGATTCA+CGG | + | chr4_3:56843200-56843219 | Msa0650090:three_prime_UTR | 45.0% |
| AAAAAAGGAGGAGGAGGAGG+AGG | + | chr4_3:56841577-56841596 | Msa0650090:CDS | 50.0% | |
| GATCTTGGACTGCAACTTGG+TGG | - | chr4_3:56841679-56841698 | None:intergenic | 50.0% | |
| GGTGGTAACAATGCTAGTGG+TGG | + | chr4_3:56841802-56841821 | Msa0650090:CDS | 50.0% | |
| GCTAGTGGTGGTAGTAGTAG+TGG | + | chr4_3:56841814-56841833 | Msa0650090:CDS | 50.0% | |
| AGTGGTGGTAGTAGTAGTGG+TGG | + | chr4_3:56841817-56841836 | Msa0650090:CDS | 50.0% | |
| GGACTTCTTCAACTCCTCCA+AGG | + | chr4_3:56841926-56841945 | Msa0650090:CDS | 50.0% | |
| TACCAGCATGCTTGGAGAGA+TGG | - | chr4_3:56842113-56842132 | None:intergenic | 50.0% | |
| CTCTCTCTATTCTGCCACAG+TGG | - | chr4_3:56842629-56842648 | None:intergenic | 50.0% | |
| CATCCTAGGTGTCTAGCTGA+TGG | + | chr4_3:56842741-56842760 | Msa0650090:CDS | 50.0% | |
| !! | ACCACGGTAGCTTGTTCTCT+TGG | + | chr4_3:56842789-56842808 | Msa0650090:CDS | 50.0% |
| ACCAAGAGAACAAGCTACCG+TGG | - | chr4_3:56842793-56842812 | None:intergenic | 50.0% | |
| ! | TGCATTGTAGGGTGTCCTCC+AGG | - | chr4_3:56841886-56841905 | None:intergenic | 55.0% |
| CACCATCTCTCCAAGCATGC+TGG | + | chr4_3:56842108-56842127 | Msa0650090:CDS | 55.0% | |
| AAAGGAGGAGGAGGAGGAGG+AGG | + | chr4_3:56841580-56841599 | Msa0650090:CDS | 60.0% | |
| GGAGGAGGAGGAGGAAGATC+AGG | + | chr4_3:56841589-56841608 | Msa0650090:CDS | 60.0% | |
| AGACCTGGTACACCTGGTCC+TGG | + | chr4_3:56841865-56841884 | Msa0650090:CDS | 60.0% | |
| CCTCCAGGACCAGGTGTACC+AGG | - | chr4_3:56841871-56841890 | None:intergenic | 65.0% | |
| CCTGGTACACCTGGTCCTGG+AGG | + | chr4_3:56841868-56841887 | Msa0650090:CDS | 65.0% | |
| ! | GTAGGGTGTCCTCCAGGACC+AGG | - | chr4_3:56841880-56841899 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 56841162 | 56843630 | 56841162 | ID=Msa0650090;Name=Msa0650090 |
| chr4_3 | mRNA | 56841162 | 56843630 | 56841162 | ID=Msa0650090-mRNA-1;Parent=Msa0650090;Name=Msa0650090-mRNA-1;_AED=0.00;_eAED=0.00;_QI=250|1|1|1|1|1|2|452|449 |
| chr4_3 | exon | 56841162 | 56842129 | 56841162 | ID=Msa0650090-mRNA-1:exon:14842;Parent=Msa0650090-mRNA-1 |
| chr4_3 | exon | 56842547 | 56843630 | 56842547 | ID=Msa0650090-mRNA-1:exon:14843;Parent=Msa0650090-mRNA-1 |
| chr4_3 | five_prime_UTR | 56841162 | 56841411 | 56841162 | ID=Msa0650090-mRNA-1:five_prime_utr;Parent=Msa0650090-mRNA-1 |
| chr4_3 | CDS | 56841412 | 56842129 | 56841412 | ID=Msa0650090-mRNA-1:cds;Parent=Msa0650090-mRNA-1 |
| chr4_3 | CDS | 56842547 | 56843178 | 56842547 | ID=Msa0650090-mRNA-1:cds;Parent=Msa0650090-mRNA-1 |
| chr4_3 | three_prime_UTR | 56843179 | 56843630 | 56843179 | ID=Msa0650090-mRNA-1:three_prime_utr;Parent=Msa0650090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
