AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0415580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0415580 MtrunA17_Chr3g0109811 92.346 1006 35 4 1 968 1 1002 0.0 1895
Msa0415580 MtrunA17_Chr3g0094741 39.612 1083 485 24 15 968 26 1068 0.0 675
Msa0415580 MtrunA17_Chr5g0442001 40.019 1077 501 26 8 968 10 1057 0.0 659
Msa0415580 MtrunA17_Chr8g0362061 37.095 1019 528 24 16 968 10 981 0.0 592
Msa0415580 MtrunA17_Chr6g0463421 38.326 908 458 16 15 857 12 882 0.0 583
Msa0415580 MtrunA17_Chr1g0202151 37.234 940 429 18 15 857 11 886 0.0 568
Msa0415580 MtrunA17_Chr7g0244411 36.992 911 451 19 14 856 10 865 1.76e-176 543
Msa0415580 MtrunA17_Chr1g0167471 39.340 788 375 12 3 744 8 738 2.96e-173 526
Msa0415580 MtrunA17_Chr4g0013271 47.321 448 225 5 237 682 36 474 1.51e-137 438
Msa0415580 MtrunA17_Chr3g0130621 33.134 335 208 6 264 596 56 376 5.54e-45 168
Msa0415580 MtrunA17_Chr3g0130621 30.347 346 207 7 280 614 20 342 3.01e-38 149
Msa0415580 MtrunA17_Chr3g0130621 30.996 271 173 3 259 529 104 360 5.04e-32 130
Msa0415580 MtrunA17_Chr3g0130621 28.472 288 192 4 328 614 16 290 4.34e-29 121
Msa0415580 MtrunA17_Chr8g0384631 34.007 297 179 6 302 596 25 306 4.17e-40 152
Msa0415580 MtrunA17_Chr8g0384631 30.545 275 177 3 264 538 39 299 1.28e-32 130
Msa0415580 MtrunA17_Chr8g0384631 28.114 281 177 5 336 614 15 272 3.13e-25 108
Msa0415580 MtrunA17_Chr8g0384631 28.571 231 151 4 263 493 90 306 8.51e-19 89.7
Msa0415580 MtrunA17_Chr6g0457381 31.786 280 152 9 265 529 79 334 7.13e-33 132
Msa0415580 MtrunA17_Chr6g0457381 25.000 316 210 7 277 582 38 336 1.57e-25 110
Msa0415580 MtrunA17_Chr6g0457381 26.946 334 207 9 296 614 5 316 1.07e-23 104
Msa0415580 MtrunA17_Chr6g0457381 30.769 260 134 10 275 512 149 384 1.19e-22 101
Msa0415580 MtrunA17_Chr6g0457381 29.353 201 125 3 273 457 193 392 2.06e-18 89.0
Msa0415580 MtrunA17_Chr2g0317861 30.435 345 204 9 277 604 165 490 4.44e-31 128
Msa0415580 MtrunA17_Chr2g0317861 28.782 271 175 6 266 530 207 465 2.15e-23 105
Msa0415580 MtrunA17_Chr2g0317861 29.677 155 107 1 275 427 323 477 2.42e-15 80.1
Msa0415580 MtrunA17_Chr2g0317861 27.111 225 144 6 386 604 116 326 3.06e-11 67.0
Msa0415580 MtrunA17_Chr5g0415871 29.365 378 198 9 296 614 16 383 6.39e-31 125
Msa0415580 MtrunA17_Chr5g0415871 26.829 164 117 2 453 614 4 166 1.17e-11 67.8
Msa0415580 MtrunA17_Chr7g0233601 30.201 298 185 5 238 531 121 399 1.47e-27 117
Msa0415580 MtrunA17_Chr7g0233601 28.134 359 193 11 295 614 47 379 4.70e-24 106
Msa0415580 MtrunA17_Chr7g0233601 30.164 305 186 8 286 581 112 398 2.22e-21 98.6
Msa0415580 MtrunA17_Chr7g0253611 27.966 354 211 13 232 571 149 472 1.73e-25 114
Msa0415580 MtrunA17_Chr7g0253611 26.984 252 160 6 373 614 128 365 1.04e-20 98.6
Msa0415580 MtrunA17_Chr7g0253611 27.885 208 108 9 280 475 301 478 3.01e-11 67.8
Msa0415580 MtrunA17_Chr3g0130871 30.112 269 150 5 265 511 73 325 2.90e-25 108
Msa0415580 MtrunA17_Chr3g0130871 28.660 321 170 12 328 614 30 325 3.52e-23 102
Msa0415580 MtrunA17_Chr3g0130871 27.843 255 160 7 277 521 31 271 2.14e-19 90.5
Msa0415580 MtrunA17_Chr7g0220131 32.203 295 153 12 348 614 23 298 1.45e-23 105
Msa0415580 MtrunA17_Chr7g0220131 24.507 355 201 11 264 578 49 376 7.26e-18 87.8
Msa0415580 MtrunA17_Chr7g0220131 31.628 215 132 7 250 451 202 414 2.35e-14 77.0
Msa0415580 MtrunA17_Chr3g0123301 27.202 386 207 9 283 602 154 531 1.84e-23 105
Msa0415580 MtrunA17_Chr3g0123301 29.310 290 181 10 335 613 154 430 1.64e-22 102
Msa0415580 MtrunA17_Chr3g0123301 30.872 298 162 11 258 529 235 514 2.55e-22 102
Msa0415580 MtrunA17_Chr7g0239601 30.918 207 123 6 418 620 22 212 1.91e-21 94.0
Msa0415580 MtrunA17_Chr7g0239601 34.483 174 111 3 277 450 39 209 7.24e-21 92.0
Msa0415580 MtrunA17_Chr7g0239601 30.270 185 118 1 378 562 34 207 3.29e-19 87.4
Msa0415580 MtrunA17_Chr7g0239601 31.250 144 86 3 259 397 73 208 2.09e-13 70.5
Msa0415580 MtrunA17_Chr3g0142381 23.200 375 240 12 266 614 47 399 4.38e-19 92.0
Msa0415580 MtrunA17_Chr3g0142381 30.672 238 137 9 250 470 198 424 6.46e-16 82.0
Msa0415580 MtrunA17_Chr3g0142381 29.358 218 109 7 423 614 46 244 1.84e-14 77.4
Msa0415580 MtrunA17_Chr3g0112381 34.932 146 92 3 306 450 17 160 3.27e-18 82.8
Msa0415580 MtrunA17_Chr3g0112381 33.103 145 89 3 475 614 17 158 1.70e-15 75.1
Msa0415580 MtrunA17_Chr3g0112381 30.496 141 83 4 264 397 27 159 1.15e-14 72.8
Msa0415580 MtrunA17_Chr3g0112381 30.519 154 94 2 414 565 19 161 1.65e-13 69.3
Msa0415580 MtrunA17_Chr1g0146211 27.536 345 179 12 249 535 5 336 4.41e-16 81.3
Msa0415580 MtrunA17_Chr1g0146211 22.039 304 197 10 321 593 49 343 2.16e-13 73.2
Msa0415580 MtrunA17_Chr3g0140201 26.316 342 200 12 245 547 18 346 1.09e-14 77.8
Msa0415580 MtrunA17_Chr5g0404371 22.886 402 209 14 276 607 62 432 4.87e-14 75.5
Msa0415580 MtrunA17_Chr5g0404371 25.468 267 182 5 263 529 156 405 1.74e-13 73.9
Msa0415580 MtrunA17_Chr3g0140211 36.047 86 49 1 277 356 17 102 2.99e-12 64.3
Msa0415580 MtrunA17_Chr1g0146221 40.244 82 47 1 277 356 14 95 9.99e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0415580 AT1G65920.1 44.391 1034 450 25 3 968 1 977 0.0 786
Msa0415580 AT1G65920.2 43.769 987 430 25 50 968 2 931 0.0 732
Msa0415580 AT5G19420.1 39.705 1083 509 28 1 968 7 1060 0.0 669
Msa0415580 AT5G12350.1 39.377 1059 515 22 5 968 10 1036 0.0 660
Msa0415580 AT5G19420.2 39.474 1064 502 26 20 968 58 1094 0.0 657
Msa0415580 AT5G19420.3 46.164 756 346 12 1 707 7 750 0.0 620
Msa0415580 AT1G69710.2 36.904 1027 536 23 15 968 11 998 0.0 561
Msa0415580 AT1G69710.1 36.904 1027 536 23 15 968 24 1011 0.0 561
Msa0415580 AT5G42140.2 43.175 718 343 11 16 697 12 700 0.0 556
Msa0415580 AT5G42140.1 43.175 718 343 11 16 697 12 700 0.0 556
Msa0415580 AT4G14368.2 41.326 709 327 15 15 682 16 676 1.63e-168 521
Msa0415580 AT4G14368.3 41.326 709 327 15 15 682 11 671 1.76e-168 521
Msa0415580 AT4G14368.4 41.467 709 328 15 15 682 16 678 5.86e-168 520
Msa0415580 AT4G14368.1 41.538 715 330 16 15 687 16 684 1.34e-167 520
Msa0415580 AT3G47660.2 34.773 949 490 21 11 857 7 928 5.01e-165 508
Msa0415580 AT3G47660.3 34.778 946 491 21 11 857 7 925 2.94e-163 504
Msa0415580 AT3G47660.5 34.778 946 491 21 11 857 7 925 2.94e-163 504
Msa0415580 AT3G47660.1 34.778 946 491 21 11 857 10 928 3.02e-163 504
Msa0415580 AT3G23270.1 38.018 797 402 22 235 968 210 977 1.51e-156 489
Msa0415580 AT3G23270.2 37.656 802 403 22 235 968 214 986 2.59e-155 486
Msa0415580 AT3G47660.7 36.575 689 356 14 235 857 110 783 7.13e-141 441
Msa0415580 AT3G47660.6 36.575 689 356 14 235 857 177 850 2.98e-140 441
Msa0415580 AT3G47660.4 36.575 689 356 14 235 857 291 964 4.91e-139 441
Msa0415580 AT3G47660.4 61.194 67 26 0 11 77 10 76 6.03e-17 86.7
Msa0415580 AT5G63860.1 33.333 333 207 5 266 596 58 377 2.41e-46 173
Msa0415580 AT5G63860.1 30.678 339 216 7 280 614 20 343 1.29e-39 153
Msa0415580 AT5G63860.1 34.173 278 170 2 259 536 104 368 2.84e-35 140
Msa0415580 AT3G02510.3 32.258 279 151 9 265 529 23 277 3.59e-36 140
Msa0415580 AT3G02510.3 28.188 298 184 11 296 582 1 279 6.86e-28 116
Msa0415580 AT3G02510.3 31.050 219 122 8 275 487 92 287 2.11e-20 94.4
Msa0415580 AT3G02510.3 27.046 281 171 9 348 615 1 260 2.38e-19 90.9
Msa0415580 AT3G02510.3 28.643 199 124 3 273 454 136 333 3.99e-18 87.4
Msa0415580 AT5G60870.1 29.769 346 214 6 231 564 114 442 1.30e-35 141
Msa0415580 AT5G60870.1 28.947 342 212 8 290 616 115 440 8.74e-29 121
Msa0415580 AT5G60870.1 29.494 356 192 11 295 614 49 381 1.94e-27 117
Msa0415580 AT3G02510.1 32.258 279 151 9 265 529 81 335 1.52e-35 140
Msa0415580 AT3G02510.1 27.301 326 207 11 268 582 31 337 2.60e-29 122
Msa0415580 AT3G02510.1 27.108 332 208 9 296 614 7 317 1.80e-26 113
Msa0415580 AT3G02510.1 31.050 219 122 8 275 487 150 345 5.64e-20 94.0
Msa0415580 AT3G02510.1 29.231 195 120 3 273 450 194 387 1.02e-17 87.0
Msa0415580 AT5G60870.2 29.462 353 213 7 231 564 114 449 2.80e-33 134
Msa0415580 AT5G60870.2 28.940 349 210 9 290 616 115 447 5.31e-28 119
Msa0415580 AT5G60870.2 29.494 356 192 11 295 614 49 381 4.18e-27 116
Msa0415580 AT1G27060.1 29.834 362 220 11 264 614 37 375 6.83e-32 129
Msa0415580 AT5G60870.4 29.861 288 181 4 231 514 114 384 4.03e-31 127
Msa0415580 AT5G60870.4 29.412 357 193 11 295 615 49 382 2.25e-27 116
Msa0415580 AT5G60870.4 28.826 281 177 5 290 561 115 381 1.35e-23 104
Msa0415580 AT5G16040.1 25.978 358 225 11 238 582 7 337 8.91e-30 123
Msa0415580 AT5G16040.1 27.893 337 199 9 296 614 7 317 2.89e-27 115
Msa0415580 AT5G16040.1 31.050 219 122 8 275 487 150 345 3.52e-21 97.4
Msa0415580 AT5G16040.1 26.642 274 135 5 396 614 1 263 1.24e-17 86.7
Msa0415580 AT5G16040.1 28.922 204 122 4 273 459 194 391 1.59e-17 86.7
Msa0415580 AT3G03790.1 29.491 373 208 15 225 578 139 475 1.88e-28 124
Msa0415580 AT3G03790.1 27.477 222 141 4 402 614 152 362 6.21e-18 90.1
Msa0415580 AT3G03790.2 29.521 376 207 16 225 578 139 478 7.83e-28 122
Msa0415580 AT3G03790.2 26.877 253 159 7 373 614 128 365 1.65e-18 92.0
Msa0415580 AT3G03790.3 29.521 376 207 16 225 578 139 478 9.77e-28 121
Msa0415580 AT3G03790.3 26.877 253 159 7 373 614 128 365 2.07e-18 91.7
Msa0415580 AT3G02510.2 31.076 251 135 9 265 501 81 307 4.87e-27 113
Msa0415580 AT3G02510.2 27.575 301 186 8 296 585 7 286 4.91e-24 104
Msa0415580 AT3G02510.2 26.910 301 185 12 238 529 7 281 1.08e-21 97.4
Msa0415580 AT3G02510.2 25.746 268 133 5 402 614 7 263 5.48e-15 77.4
Msa0415580 AT3G55580.1 30.357 280 158 5 309 562 215 483 5.78e-26 113
Msa0415580 AT3G55580.1 27.456 397 233 10 252 607 94 476 1.57e-23 105
Msa0415580 AT3G55580.1 35.882 170 106 3 277 445 313 480 1.84e-22 102
Msa0415580 AT5G08710.1 27.726 321 220 7 299 614 54 367 1.70e-25 111
Msa0415580 AT5G08710.1 26.842 380 231 11 266 617 73 433 2.07e-25 110
Msa0415580 AT5G08710.1 37.423 163 93 4 459 614 43 203 2.25e-19 92.4
Msa0415580 AT5G08710.1 29.703 202 120 6 264 450 238 432 1.41e-17 87.0
Msa0415580 AT5G08710.1 30.350 257 165 4 265 511 178 430 1.56e-16 84.0
Msa0415580 AT5G16040.2 28.904 301 182 8 296 585 7 286 3.27e-25 108
Msa0415580 AT5G16040.2 25.497 302 188 9 238 529 7 281 1.38e-22 100
Msa0415580 AT5G16040.2 26.545 275 136 5 396 615 1 264 4.28e-18 87.4
Msa0415580 AT3G15430.6 28.344 314 200 8 277 580 165 463 3.51e-25 110
Msa0415580 AT3G15430.6 30.451 266 165 8 331 590 115 366 1.98e-21 99.4
Msa0415580 AT3G15430.6 26.642 274 184 5 266 534 207 468 4.33e-19 92.4
Msa0415580 AT3G15430.6 28.017 232 144 6 265 488 258 474 2.64e-14 77.0
Msa0415580 AT3G15430.6 27.966 236 150 7 386 614 116 338 1.90e-13 74.3
Msa0415580 AT3G15430.6 25.749 167 121 2 264 427 310 476 2.15e-11 67.8
Msa0415580 AT3G15430.4 28.344 314 200 8 277 580 165 463 3.51e-25 110
Msa0415580 AT3G15430.4 30.451 266 165 8 331 590 115 366 1.98e-21 99.4
Msa0415580 AT3G15430.4 26.642 274 184 5 266 534 207 468 4.33e-19 92.4
Msa0415580 AT3G15430.4 28.017 232 144 6 265 488 258 474 2.64e-14 77.0
Msa0415580 AT3G15430.4 27.966 236 150 7 386 614 116 338 1.90e-13 74.3
Msa0415580 AT3G15430.4 25.749 167 121 2 264 427 310 476 2.15e-11 67.8
Msa0415580 AT3G15430.2 28.344 314 200 8 277 580 165 463 3.51e-25 110
Msa0415580 AT3G15430.2 30.451 266 165 8 331 590 115 366 1.98e-21 99.4
Msa0415580 AT3G15430.2 26.642 274 184 5 266 534 207 468 4.33e-19 92.4
Msa0415580 AT3G15430.2 28.017 232 144 6 265 488 258 474 2.64e-14 77.0
Msa0415580 AT3G15430.2 27.966 236 150 7 386 614 116 338 1.90e-13 74.3
Msa0415580 AT3G15430.2 25.749 167 121 2 264 427 310 476 2.15e-11 67.8
Msa0415580 AT3G15430.3 28.344 314 200 8 277 580 165 463 3.51e-25 110
Msa0415580 AT3G15430.3 30.451 266 165 8 331 590 115 366 1.98e-21 99.4
Msa0415580 AT3G15430.3 26.642 274 184 5 266 534 207 468 4.33e-19 92.4
Msa0415580 AT3G15430.3 28.017 232 144 6 265 488 258 474 2.64e-14 77.0
Msa0415580 AT3G15430.3 27.966 236 150 7 386 614 116 338 1.90e-13 74.3
Msa0415580 AT3G15430.3 25.749 167 121 2 264 427 310 476 2.15e-11 67.8
Msa0415580 AT3G15430.5 28.344 314 200 8 277 580 165 463 3.51e-25 110
Msa0415580 AT3G15430.5 30.451 266 165 8 331 590 115 366 1.98e-21 99.4
Msa0415580 AT3G15430.5 26.642 274 184 5 266 534 207 468 4.33e-19 92.4
Msa0415580 AT3G15430.5 28.017 232 144 6 265 488 258 474 2.64e-14 77.0
Msa0415580 AT3G15430.5 27.966 236 150 7 386 614 116 338 1.90e-13 74.3
Msa0415580 AT3G15430.5 25.749 167 121 2 264 427 310 476 2.15e-11 67.8
Msa0415580 AT3G15430.1 28.344 314 200 8 277 580 165 463 3.51e-25 110
Msa0415580 AT3G15430.1 30.451 266 165 8 331 590 115 366 1.98e-21 99.4
Msa0415580 AT3G15430.1 26.642 274 184 5 266 534 207 468 4.33e-19 92.4
Msa0415580 AT3G15430.1 28.017 232 144 6 265 488 258 474 2.64e-14 77.0
Msa0415580 AT3G15430.1 27.966 236 150 7 386 614 116 338 1.90e-13 74.3
Msa0415580 AT3G15430.1 25.749 167 121 2 264 427 310 476 2.15e-11 67.8
Msa0415580 AT5G11580.1 27.083 384 216 15 264 593 57 430 3.73e-25 111
Msa0415580 AT5G11580.1 26.966 356 214 11 266 582 6 354 2.62e-20 96.7
Msa0415580 AT5G11580.1 26.715 277 150 9 383 618 18 282 4.07e-15 80.1
Msa0415580 AT5G60870.3 28.520 277 175 4 300 564 8 273 5.53e-25 106
Msa0415580 AT5G60870.3 28.807 243 143 6 243 477 10 230 1.16e-19 90.9
Msa0415580 AT5G60870.3 30.120 249 145 7 383 616 37 271 1.97e-18 87.0
Msa0415580 AT5G60870.3 31.111 225 127 6 402 614 4 212 5.02e-17 82.8
Msa0415580 AT3G53830.3 25.055 451 235 13 226 607 44 460 1.54e-23 105
Msa0415580 AT3G53830.3 27.431 288 156 8 261 513 200 469 8.27e-23 103
Msa0415580 AT3G26100.5 28.975 283 171 6 266 529 240 511 1.82e-23 106
Msa0415580 AT3G26100.5 27.035 344 202 9 281 594 201 525 8.65e-23 103
Msa0415580 AT3G26100.5 27.597 308 208 6 278 580 147 444 8.94e-22 100
Msa0415580 AT3G26100.5 27.243 301 181 8 331 614 147 426 2.85e-20 96.3
Msa0415580 AT3G26100.6 28.975 283 171 6 266 529 240 511 1.82e-23 106
Msa0415580 AT3G26100.6 27.035 344 202 9 281 594 201 525 8.65e-23 103
Msa0415580 AT3G26100.6 27.597 308 208 6 278 580 147 444 8.94e-22 100
Msa0415580 AT3G26100.6 27.243 301 181 8 331 614 147 426 2.85e-20 96.3
Msa0415580 AT3G26100.2 28.975 283 171 6 266 529 240 511 1.82e-23 106
Msa0415580 AT3G26100.2 27.035 344 202 9 281 594 201 525 8.65e-23 103
Msa0415580 AT3G26100.2 27.597 308 208 6 278 580 147 444 8.94e-22 100
Msa0415580 AT3G26100.2 27.243 301 181 8 331 614 147 426 2.85e-20 96.3
Msa0415580 AT3G26100.3 28.975 283 171 6 266 529 140 411 2.51e-23 104
Msa0415580 AT3G26100.3 26.879 346 204 9 281 596 101 427 2.45e-22 101
Msa0415580 AT3G26100.3 26.846 298 186 7 331 614 47 326 3.26e-20 95.1
Msa0415580 AT3G26100.4 28.975 283 171 6 266 529 140 411 2.51e-23 104
Msa0415580 AT3G26100.4 26.879 346 204 9 281 596 101 427 2.45e-22 101
Msa0415580 AT3G26100.4 26.846 298 186 7 331 614 47 326 3.26e-20 95.1
Msa0415580 AT3G26100.1 28.975 283 171 6 266 529 140 411 2.51e-23 104
Msa0415580 AT3G26100.1 26.879 346 204 9 281 596 101 427 2.45e-22 101
Msa0415580 AT3G26100.1 26.846 298 186 7 331 614 47 326 3.26e-20 95.1
Msa0415580 AT5G08710.2 27.875 287 194 6 299 580 54 332 1.06e-22 100
Msa0415580 AT5G08710.2 37.423 163 93 4 459 614 43 203 7.55e-20 92.4
Msa0415580 AT5G08710.2 29.245 212 126 5 276 477 135 332 3.23e-17 84.7
Msa0415580 AT5G08710.2 26.165 279 174 8 266 530 73 333 2.06e-15 79.3
Msa0415580 AT3G53830.4 27.431 288 156 8 261 513 228 497 2.02e-22 102
Msa0415580 AT3G53830.4 24.477 478 232 13 226 607 44 488 2.57e-22 102
Msa0415580 AT3G02300.1 32.677 254 136 7 386 620 66 303 2.07e-22 102
Msa0415580 AT3G02300.1 24.850 334 194 11 279 578 65 375 2.92e-17 86.3
Msa0415580 AT3G02300.1 27.564 156 95 5 265 405 154 306 5.68e-14 76.3
Msa0415580 AT3G02300.2 32.677 254 136 7 386 620 77 314 2.16e-22 102
Msa0415580 AT3G02300.2 24.850 334 194 11 279 578 76 386 2.32e-17 86.7
Msa0415580 AT3G02300.2 27.564 156 95 5 265 405 165 317 4.72e-14 76.3
Msa0415580 AT1G19880.1 24.740 384 243 12 266 621 47 412 1.41e-18 90.9
Msa0415580 AT1G19880.1 28.111 217 119 6 423 614 46 250 1.88e-14 77.8
Msa0415580 AT5G11580.2 26.481 287 169 11 339 593 3 279 5.43e-18 87.8
Msa0415580 AT5G11580.2 30.252 238 122 9 329 535 48 272 2.64e-12 70.5
Msa0415580 AT3G53830.1 26.522 230 128 6 261 455 200 423 1.81e-17 86.7
Msa0415580 AT3G53830.1 23.892 406 207 12 226 562 44 416 1.30e-15 80.9
Msa0415580 AT3G53830.2 26.522 230 128 6 261 455 228 451 3.06e-17 86.3
Msa0415580 AT3G53830.2 23.326 433 204 12 226 562 44 444 2.09e-14 77.4
Msa0415580 AT1G76950.1 40.171 117 41 1 15 102 11 127 6.78e-17 86.7
Msa0415580 AT5G48330.2 23.577 369 213 11 276 594 83 432 2.65e-14 77.0
Msa0415580 AT5G48330.2 27.848 237 148 5 383 615 84 301 3.12e-13 73.6
Msa0415580 AT5G48330.1 23.514 370 213 11 276 594 83 433 3.18e-14 76.6
Msa0415580 AT5G48330.1 27.731 238 148 5 383 615 84 302 3.51e-13 73.6

Find 239 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTAATTCATGAATATTT+TGG 0.114086 3_2:+61893284 Msa0415580:three_prime_UTR
AGTGCATTAAAATCCAAATT+TGG 0.135408 3_2:+61892676 Msa0415580:CDS
TCCCTCTCCTTGAACAATTT+TGG 0.137886 3_2:-61888773 None:intergenic
AAGAATACTTCTCCCAAATT+TGG 0.138458 3_2:-61892689 None:intergenic
GTTGACACTCTTGTATTTCT+TGG 0.141830 3_2:-61891965 None:intergenic
ACAAGAATTTCTTCCAAATT+TGG 0.165099 3_2:+61892576 Msa0415580:CDS
TGACTACGATTAAGGAAATT+AGG 0.223132 3_2:-61892932 None:intergenic
TTGTTTATTAAGGATTTATT+TGG 0.224857 3_2:-61887254 None:intergenic
GAGAAGTATTCTTCTTAAAA+AGG 0.224871 3_2:+61892699 Msa0415580:CDS
TTAAGAGACTCAACTTCTTT+TGG 0.229331 3_2:-61890603 None:intergenic
GATTGGTCACTAATTGAAAT+AGG 0.251954 3_2:-61891188 None:intergenic
AAATTATGAGACACTCTTAT+TGG 0.255417 3_2:-61893331 None:intergenic
GACAATGGAAGAAGTTTCTT+TGG 0.257957 3_2:+61887501 Msa0415580:CDS
AATGCACTAGAGAATATTAT+AGG 0.261303 3_2:-61892661 None:intergenic
TAAACAAATGCAACCATAAA+AGG 0.264022 3_2:+61887270 Msa0415580:five_prime_UTR
TTTATATTGCTATGAATATC+TGG 0.278148 3_2:-61889922 None:intergenic
CTTAAACTACTAAAAGCTTT+TGG 0.282594 3_2:-61889283 None:intergenic
CTGTCCGTGTTGGCATTTCT+TGG 0.283585 3_2:-61892625 None:intergenic
GCCTTAAGCGTGTGAGATTT+AGG 0.288205 3_2:+61892839 Msa0415580:CDS
TTCTTCTATGAGCAACTTAT+CGG 0.297027 3_2:-61891735 None:intergenic
GGTGGAATTGGTTGCCTTGT+AGG 0.298119 3_2:+61890060 Msa0415580:CDS
ATGGTTGCATTTGTTTATTA+AGG 0.305653 3_2:-61887264 None:intergenic
GAAAGACTCTTGTTCAGATT+TGG 0.308461 3_2:+61890389 Msa0415580:CDS
ACCTTACTATAATATTAAAA+TGG 0.308837 3_2:-61893362 None:intergenic
GCAATGGGAAGTGCAAAATA+TGG 0.311634 3_2:+61890888 Msa0415580:CDS
ATTCTAAATTGTGCTGAATA+TGG 0.313248 3_2:-61891665 None:intergenic
ATGATATGGGGTGGTGGAAT+TGG 0.317338 3_2:+61890048 Msa0415580:CDS
TATCTAGGATGAGAGAAATT+TGG 0.320240 3_2:+61888702 Msa0415580:intron
GATTGAAAGCTGTGATTTCT+AGG 0.320836 3_2:+61889251 Msa0415580:CDS
GTATGTATAGGTGCCAAATT+TGG 0.326104 3_2:-61892589 None:intergenic
ATGCACTAGAGAATATTATA+GGG 0.326166 3_2:-61892660 None:intergenic
TGAATATCTGGATTAATATA+TGG 0.326167 3_2:-61889910 None:intergenic
CCTCCTGCCTCCGCACTTGT+AGG 0.328701 3_2:+61890003 Msa0415580:CDS
CGAAAGGCCTTGCTCTTAAC+CGG 0.330346 3_2:-61891332 None:intergenic
TCATTTCTTTGTTAGTTTGA+TGG 0.331691 3_2:-61887480 None:intergenic
ACATGTGCTTTGACGGATTC+CGG 0.336666 3_2:+61890348 Msa0415580:CDS
CAAGGGAAGTGTGGAAGGTT+AGG 0.337218 3_2:+61890234 Msa0415580:CDS
ACGTGGGGCAAAGGTGAAAA+TGG 0.337439 3_2:+61891041 Msa0415580:CDS
CTCTTAGTCAAACGTGTTAC+CGG 0.338233 3_2:+61891528 Msa0415580:CDS
GCACTTAGCAGCTTCCTCTT+TGG 0.341820 3_2:-61892015 None:intergenic
AGTCGGAAAGGACAGAGTTT+TGG 0.343433 3_2:-61888310 None:intergenic
GAGGTTCATTGTTTCACAAT+AGG 0.347148 3_2:-61887409 None:intergenic
CTTAGTGTAGGAGGTGATAC+TGG 0.348331 3_2:+61893194 Msa0415580:three_prime_UTR
TATTGAAGGATGTCATGATA+TGG 0.351822 3_2:+61890034 Msa0415580:CDS
GTGCATTAAAATCCAAATTT+GGG 0.352443 3_2:+61892677 Msa0415580:CDS
AAGTCGCCGAGTGGAGAAAA+AGG 0.354320 3_2:+61892817 Msa0415580:CDS
GTTAGGGCAAAGAATTGATA+TGG 0.359376 3_2:+61890251 Msa0415580:CDS
AAAAGAAGTTGAGTCTCTTA+AGG 0.360820 3_2:+61890605 Msa0415580:CDS
CTTTCTGCGAAAATCGCTTC+CGG 0.369447 3_2:-61893050 None:intergenic
AGAAATTTGGTATGGTGCTC+AGG 0.372218 3_2:+61888715 Msa0415580:CDS
AAGTAGTGAACGTTCATCTA+TGG 0.375800 3_2:+61891388 Msa0415580:CDS
GATGTACAAAATGTAGCTTT+AGG 0.379017 3_2:+61890159 Msa0415580:CDS
AAATATTCATGAATTAATAA+AGG 0.383840 3_2:-61893281 None:intergenic
AAGTGCAAAATATGGACAAT+TGG 0.386634 3_2:+61890896 Msa0415580:CDS
CAAGCTGCTACTTGGTTTGT+TGG 0.388672 3_2:+61889229 Msa0415580:CDS
GGATTAATATATGGAGAACT+TGG 0.389967 3_2:-61889901 None:intergenic
AATCAAGTTGTAATGGTTGT+AGG 0.395082 3_2:+61891207 Msa0415580:CDS
TACAACCATTACAACTTGAT+TGG 0.395233 3_2:-61891205 None:intergenic
TGCCTAGTGGAAGGAAGGTT+TGG 0.396709 3_2:+61891558 Msa0415580:CDS
AATACTGCATCTTAATTTCG+TGG 0.402184 3_2:+61892978 Msa0415580:three_prime_UTR
GTGGAATTGGTTGCCTTGTA+GGG 0.403854 3_2:+61890061 Msa0415580:CDS
ACCTCCTACACTAAGAACTA+TGG 0.406995 3_2:-61893186 None:intergenic
GATGGTACATTTGGAGTACT+TGG 0.415173 3_2:+61890552 Msa0415580:CDS
CTGTCCTTTCCGACTTTCTC+CGG 0.415811 3_2:+61888318 Msa0415580:CDS
ACGTATGGAGATGGTACATT+TGG 0.418930 3_2:+61890543 Msa0415580:CDS
TTGCAGCTTCACACGATCTC+AGG 0.420713 3_2:+61892517 Msa0415580:intron
AAAGAAGTTGAGTCTCTTAA+GGG 0.422109 3_2:+61890606 Msa0415580:CDS
TTGTTGAGGCTTTAAGAGAT+AGG 0.423592 3_2:+61891108 Msa0415580:CDS
TGTTCAGATTTGGTTGATGA+AGG 0.423770 3_2:+61890399 Msa0415580:CDS
TAGGAGGTGATACTGGCTTC+AGG 0.425135 3_2:+61893201 Msa0415580:three_prime_UTR
ATGGAAGAAGTTTCTTTGGC+TGG 0.428677 3_2:+61887505 Msa0415580:CDS
ATTGGGAAATCCACATGTTA+AGG 0.428801 3_2:+61890914 Msa0415580:CDS
ACCTAAATCTCACACGCTTA+AGG 0.430234 3_2:-61892840 None:intergenic
AGAACATAACATAAGAAAAC+AGG 0.432118 3_2:-61887334 None:intergenic
AGAATGCATTGAAGGTTGAA+TGG 0.433158 3_2:+61892755 Msa0415580:CDS
TCGTCCCTCTCCAGCATTCA+TGG 0.436141 3_2:+61889859 Msa0415580:CDS
GCGGTGGATTCTAGTAACTT+TGG 0.440816 3_2:-61890129 None:intergenic
GAAGATAGTTCTTCTACGTT+AGG 0.444918 3_2:+61891611 Msa0415580:CDS
ACAAAGCACAAGCTGCTACT+TGG 0.449070 3_2:+61889221 Msa0415580:CDS
TAATCATGGCCTAGAACAAA+AGG 0.451657 3_2:+61892546 Msa0415580:CDS
CCATTCGCCACAAGCAATGC+TGG 0.452990 3_2:-61890484 None:intergenic
GTATCATACATGTGCTTTGA+CGG 0.454992 3_2:+61890341 Msa0415580:CDS
AGTGCAAAATATGGACAATT+GGG 0.455143 3_2:+61890897 Msa0415580:CDS
CATCCCGTTGGCTTTCATGT+TGG 0.457370 3_2:-61891586 None:intergenic
GAAGTTTACTGCTGGGGTCA+AGG 0.459881 3_2:+61890216 Msa0415580:CDS
TGAGGCTTTAAGAGATAGGC+AGG 0.464989 3_2:+61891112 Msa0415580:CDS
CATATTGCAACTGTGAAACT+TGG 0.467372 3_2:-61891155 None:intergenic
TCAACAAGAGAATGCATTGA+AGG 0.467471 3_2:+61892747 Msa0415580:CDS
CGACTGGTAAGCTGTTTACA+TGG 0.468276 3_2:+61890715 Msa0415580:CDS
AGTGACCAATCAAGTTGTAA+TGG 0.468450 3_2:+61891200 Msa0415580:CDS
TGTTCAACAGCTCTATCAAA+AGG 0.468529 3_2:-61887535 None:intergenic
AAGGGAAGTGTGGAAGGTTA+GGG 0.469125 3_2:+61890235 Msa0415580:CDS
AATGGTTGTAGGTTACCGTT+TGG 0.472951 3_2:+61891218 Msa0415580:CDS
TGTTAAGGACAGAGCGGTTG+TGG 0.475178 3_2:+61890929 Msa0415580:CDS
GGTATGGTGCTCAGGGAAGC+AGG 0.475334 3_2:+61888723 Msa0415580:CDS
CCAGCATTGCTTGTGGCGAA+TGG 0.481761 3_2:+61890484 Msa0415580:CDS
GTCTGTTATGCCATGAATGC+TGG 0.483018 3_2:-61889869 None:intergenic
GGAGAAACAAATGTGACAAA+TGG 0.485329 3_2:+61891494 Msa0415580:CDS
AAAGGTGAAAATGGAGAACT+AGG 0.486261 3_2:+61891050 Msa0415580:CDS
GACAGAGCGGTTGTGGTTGA+AGG 0.488656 3_2:+61890936 Msa0415580:CDS
TGTAGGAAACAATGTATTGA+AGG 0.489219 3_2:+61890020 Msa0415580:CDS
TTCTTCCTTGTGAAGCCAAA+CGG 0.492985 3_2:-61891233 None:intergenic
AAAGCATCTAAATAATGATA+AGG 0.493227 3_2:+61887381 Msa0415580:five_prime_UTR
AGGCATCATCAGAACATGAT+TGG 0.494229 3_2:+61891452 Msa0415580:CDS
CATGGCCTAGAACAAAAGGC+TGG 0.499113 3_2:+61892550 Msa0415580:CDS
AACAAGGGGAAGTTTACTGC+TGG 0.500374 3_2:+61890208 Msa0415580:CDS
AGTAGTTTAAGAAGCTGCAA+AGG 0.502076 3_2:+61889295 Msa0415580:CDS
ACCAAAATTGTTCAAGGAGA+GGG 0.503781 3_2:+61888772 Msa0415580:CDS
AGAAAGAAGCTGAAAGGTGG+TGG 0.505078 3_2:+61893067 Msa0415580:three_prime_UTR
AGTTGTGTCAGTAGTCCCTC+TGG 0.507845 3_2:+61889325 Msa0415580:CDS
GACTGGTAAGCTGTTTACAT+GGG 0.509323 3_2:+61890716 Msa0415580:CDS
CTGTTCATATCAGTATGTAT+AGG 0.509933 3_2:-61892601 None:intergenic
GGAGTAACCAAAATTGTTCA+AGG 0.510194 3_2:+61888766 Msa0415580:CDS
AGTATTGTACTTAAAGCGTT+CGG 0.511954 3_2:-61890691 None:intergenic
ACATGGGGTGATGCAGATGA+AGG 0.512236 3_2:+61890732 Msa0415580:CDS
CATTTGGAGTACTTGGACAT+GGG 0.512348 3_2:+61890559 Msa0415580:CDS
AAGTTTACTGCTGGGGTCAA+GGG 0.513656 3_2:+61890217 Msa0415580:CDS
TTTAAGTACAATACTTCGAC+TGG 0.514759 3_2:+61890699 Msa0415580:CDS
TTTCCTACAAGTGCGGAGGC+AGG 0.515452 3_2:-61890006 None:intergenic
ATTGAAGGATGTCATGATAT+GGG 0.515938 3_2:+61890035 Msa0415580:CDS
GCAATTGTATCTATAAAGAA+AGG 0.522821 3_2:+61888253 Msa0415580:CDS
GACTTTAGCACTTACTAACA+TGG 0.523267 3_2:+61890854 Msa0415580:CDS
GATGTCATGATATGGGGTGG+TGG 0.528574 3_2:+61890042 Msa0415580:CDS
GTTCATTGTTTCACAATAGG+TGG 0.529018 3_2:-61887406 None:intergenic
TGCGGTCGGTTATTCACGTA+TGG 0.530199 3_2:+61890528 Msa0415580:CDS
ACCATAGTTCTTAGTGTAGG+AGG 0.530259 3_2:+61893185 Msa0415580:three_prime_UTR
GGTGATGTCACTGAAGATAG+AGG 0.530760 3_2:+61891473 Msa0415580:CDS
AATCCAACATGAAAGCCAAC+GGG 0.536394 3_2:+61891583 Msa0415580:CDS
GTTCAGATTTGGTTGATGAA+GGG 0.537905 3_2:+61890400 Msa0415580:CDS
GAATGCATTGAAGGTTGAAT+GGG 0.538215 3_2:+61892756 Msa0415580:CDS
AGTGTCTACACGTGGGGCAA+AGG 0.539305 3_2:+61891032 Msa0415580:CDS
GAAAGGCCTTGCTCTTAACC+GGG 0.540072 3_2:-61891331 None:intergenic
TGACGCCTCTCAATTTACTC+AGG 0.542995 3_2:+61889384 Msa0415580:CDS
GGGGTCAAGGGAAGTGTGGA+AGG 0.545751 3_2:+61890229 Msa0415580:CDS
ATCTGTTTATTTCACTTCGT+AGG 0.548050 3_2:-61887204 None:intergenic
CAACAAAACAAGGTGTGTAT+CGG 0.548162 3_2:-61891091 None:intergenic
AACTATCTTCTACATCCCGT+TGG 0.551149 3_2:-61891598 None:intergenic
TAAGTGCAAAGCAGCAAAAG+AGG 0.553351 3_2:+61892031 Msa0415580:CDS
AAGAATAACATAAGAGACAA+AGG 0.555798 3_2:-61887444 None:intergenic
GATGCAGATGAAGGGAGGCT+TGG 0.556575 3_2:+61890741 Msa0415580:CDS
ACAAGGGGAAGTTTACTGCT+GGG 0.557125 3_2:+61890209 Msa0415580:CDS
CTTAAAGCCTCAACAAAACA+AGG 0.557225 3_2:-61891101 None:intergenic
CGGTTATTCACGTATGGAGA+TGG 0.557288 3_2:+61890534 Msa0415580:CDS
GAAAATGGAGAACTAGGGCT+AGG 0.557337 3_2:+61891056 Msa0415580:CDS
GAGTTGGTCTGTTGCCAAAG+AGG 0.558617 3_2:+61892001 Msa0415580:CDS
CTCTTAAGGGTCTATGTGTG+AGG 0.559626 3_2:+61890619 Msa0415580:CDS
GAGACAAAGGAAACAGAAGA+AGG 0.561840 3_2:-61887431 None:intergenic
GGTCTGTTGCTTGTGGAACA+TGG 0.562093 3_2:+61890640 Msa0415580:CDS
GTTCAACAGCTCTATCAAAA+GGG 0.563668 3_2:-61887534 None:intergenic
GAAATACTAATACCTTCGAC+AGG 0.566833 3_2:-61890462 None:intergenic
TTCACCATAGTTCTTAGTGT+AGG 0.572217 3_2:+61893182 Msa0415580:three_prime_UTR
TTTCATTCACAATCCCTACA+AGG 0.572274 3_2:-61890074 None:intergenic
AGAAAACTGCTAGAGATGAA+TGG 0.573070 3_2:-61893160 None:intergenic
TGCTGGGGTCAAGGGAAGTG+TGG 0.574844 3_2:+61890225 Msa0415580:CDS
ATCTCAGGAAAAGATAATCA+TGG 0.574994 3_2:+61892532 Msa0415580:CDS
TTTGAATGCATCTCTAGCCC+CGG 0.576039 3_2:+61891313 Msa0415580:CDS
TCTAGCCCCGGTTAAGAGCA+AGG 0.579188 3_2:+61891325 Msa0415580:CDS
ATAAATATGAAATTGAAACT+AGG 0.580980 3_2:+61893115 Msa0415580:three_prime_UTR
TTGTAGGGATTGTGAATGAA+AGG 0.581089 3_2:+61890076 Msa0415580:CDS
GAAAAGCATTTGCGATTGAG+CGG 0.582270 3_2:+61888745 Msa0415580:CDS
AAACATGCCTAGTGGAAGGA+AGG 0.587377 3_2:+61891553 Msa0415580:CDS
TGTGTGAGGTCTGTTGCTTG+TGG 0.587780 3_2:+61890633 Msa0415580:CDS
GTACAAAATGTAGCTTTAGG+AGG 0.588904 3_2:+61890162 Msa0415580:CDS
ACTTTAGCACTTACTAACAT+GGG 0.592010 3_2:+61890855 Msa0415580:CDS
AACCAAAATTGTTCAAGGAG+AGG 0.593734 3_2:+61888771 Msa0415580:CDS
AAACTTTCATTACCTGTCGA+AGG 0.594396 3_2:+61890450 Msa0415580:CDS
CGCAGAAAGAAGCTGAAAGG+TGG 0.594712 3_2:+61893064 Msa0415580:three_prime_UTR
GAAATTTGGTATGGTGCTCA+GGG 0.595030 3_2:+61888716 Msa0415580:CDS
GGTTACCGTTTGGCTTCACA+AGG 0.595319 3_2:+61891228 Msa0415580:CDS
ACCGCTCTGTCCTTAACATG+TGG 0.596192 3_2:-61890924 None:intergenic
TGGGTTGAACAATATGAGAA+TGG 0.597216 3_2:+61892775 Msa0415580:CDS
ACATTTGGAGTACTTGGACA+TGG 0.598135 3_2:+61890558 Msa0415580:CDS
AAACATAACTGTTATAATTG+CGG 0.598861 3_2:+61891254 Msa0415580:CDS
AGTATTTCCAGCATTGCTTG+TGG 0.599346 3_2:+61890477 Msa0415580:CDS
GCAACAATCAGCAGATACAA+AGG 0.599766 3_2:+61891432 Msa0415580:CDS
GGTTAGACAGAGTGTAAGAG+TGG 0.600508 3_2:-61887313 None:intergenic
AAATCCAACATGAAAGCCAA+CGG 0.601688 3_2:+61891582 Msa0415580:CDS
CTTCAGGGAGTGTCTACACG+TGG 0.602762 3_2:+61891024 Msa0415580:CDS
TTTCGCAGAAAGAAGCTGAA+AGG 0.602996 3_2:+61893061 Msa0415580:three_prime_UTR
AGGATGAGAGAAATTTGGTA+TGG 0.603318 3_2:+61888707 Msa0415580:intron
GTTTCGTAACTATTGCAGCA+TGG 0.606958 3_2:-61890188 None:intergenic
CAATCGTCTCTAGTTGCGGT+CGG 0.608233 3_2:+61890514 Msa0415580:CDS
ATGGCCTAGAACAAAAGGCT+GGG 0.609614 3_2:+61892551 Msa0415580:CDS
CAGTCCAAGAAATGCCAACA+CGG 0.611267 3_2:+61892621 Msa0415580:CDS
AAGGGAGAATTAGAAGTCAG+TGG 0.614649 3_2:+61890418 Msa0415580:CDS
GATTAATATATGGAGAACTT+GGG 0.614830 3_2:-61889900 None:intergenic
GCTGCAATAGTTACGAAACA+AGG 0.615016 3_2:+61890192 Msa0415580:CDS
AGTTCAGAGGCTGAGAGCTG+AGG 0.616361 3_2:+61891757 Msa0415580:CDS
TACATTGTTTCCTACAAGTG+CGG 0.616407 3_2:-61890013 None:intergenic
TCCGGTGACGTATACACGTG+GGG 0.618700 3_2:+61890366 Msa0415580:CDS
CAACAGCTCTATCAAAAGGG+AGG 0.622966 3_2:-61887531 None:intergenic
CTACTTTGTCACTTTCAGAA+CGG 0.625954 3_2:+61889788 Msa0415580:CDS
TTGTACATCTAACATTGCGG+TGG 0.627868 3_2:-61890145 None:intergenic
CTTTCGGCGTAAAATTCCAG+AGG 0.627920 3_2:-61889341 None:intergenic
ACTGCAATCGTCTCTAGTTG+CGG 0.628229 3_2:+61890510 Msa0415580:CDS
AACAGCTCTATCAAAAGGGA+GGG 0.628571 3_2:-61887530 None:intergenic
CATGGGGTGATGCAGATGAA+GGG 0.629195 3_2:+61890733 Msa0415580:CDS
TGCACTAGAGAATATTATAG+GGG 0.629752 3_2:-61892659 None:intergenic
TTCCAAACCTTCCTTCCACT+AGG 0.631197 3_2:-61891560 None:intergenic
TGCTCATAGAAGAAGTTCAG+AGG 0.631876 3_2:+61891744 Msa0415580:CDS
GAAAGAAGCTGAAAGGTGGT+GGG 0.632332 3_2:+61893068 Msa0415580:three_prime_UTR
CTGCAATAGTTACGAAACAA+GGG 0.632740 3_2:+61890193 Msa0415580:CDS
ATTCGATAGACTGTCCGTGT+TGG 0.633618 3_2:-61892635 None:intergenic
CGTTCTGAAAGTGACAAAGT+AGG 0.636813 3_2:-61889787 None:intergenic
ACAAAGGAAACAGAAGAAGG+AGG 0.640909 3_2:-61887428 None:intergenic
TTCAGGGAGTGTCTACACGT+GGG 0.641981 3_2:+61891025 Msa0415580:CDS
TGCTTGTGGAACATGGCATA+CGG 0.642519 3_2:+61890647 Msa0415580:CDS
CCTACAAGTGCGGAGGCAGG+AGG 0.643913 3_2:-61890003 None:intergenic
GCACGATTCACAAACACGAA+AGG 0.644210 3_2:-61891348 None:intergenic
AACTAACAAAGAAATGACAA+TGG 0.644649 3_2:+61887486 Msa0415580:exon
CAAGGGGAAGTTTACTGCTG+GGG 0.645789 3_2:+61890210 Msa0415580:CDS
GGTGCATATTTACTCAAGTG+TGG 0.646815 3_2:+61888274 Msa0415580:CDS
TTGAAGGATGTCATGATATG+GGG 0.647516 3_2:+61890036 Msa0415580:CDS
ATTGTTTCCTACAAGTGCGG+AGG 0.647539 3_2:-61890010 None:intergenic
CAGGTAGATACAATAACATG+TGG 0.648865 3_2:+61891131 Msa0415580:CDS
TTTCGGCGTAAAATTCCAGA+GGG 0.649198 3_2:-61889340 None:intergenic
AAGGTGAAAATGGAGAACTA+GGG 0.650264 3_2:+61891051 Msa0415580:CDS
TTACTCAAGTGTGGTAACAG+AGG 0.652482 3_2:+61888283 Msa0415580:CDS
TTATGCCATGAATGCTGGAG+AGG 0.653342 3_2:-61889864 None:intergenic
GGGGTGATGCAGATGAAGGG+AGG 0.657658 3_2:+61890736 Msa0415580:CDS
TCATGCATACCGGAGAAAGT+CGG 0.658136 3_2:-61888327 None:intergenic
TATGTTAAAATGATATCTTG+TGG 0.658877 3_2:+61890975 Msa0415580:CDS
TCAGGGAGTGTCTACACGTG+GGG 0.659297 3_2:+61891026 Msa0415580:CDS
TTCCGGTGACGTATACACGT+GGG 0.663644 3_2:+61890365 Msa0415580:CDS
TATGCCATGAATGCTGGAGA+GGG 0.664043 3_2:-61889863 None:intergenic
ACTGGTAAGCTGTTTACATG+GGG 0.666773 3_2:+61890717 Msa0415580:CDS
AAGGATGTCATGATATGGGG+TGG 0.667227 3_2:+61890039 Msa0415580:CDS
ATTCCGGTGACGTATACACG+TGG 0.676244 3_2:+61890364 Msa0415580:CDS
CATACCGGAGAAAGTCGGAA+AGG 0.680831 3_2:-61888322 None:intergenic
TGAAACCTGAGTAAATTGAG+AGG 0.683790 3_2:-61889389 None:intergenic
CCGGTGACGTATACACGTGG+GGG 0.688553 3_2:+61890367 Msa0415580:CDS
TGCAATAGTTACGAAACAAG+GGG 0.689422 3_2:+61890194 Msa0415580:CDS
AGTGTGATACAATGTGGACA+AGG 0.698706 3_2:+61891635 Msa0415580:CDS
ACATTGACAAAGTCGCCGAG+TGG 0.699185 3_2:+61892808 Msa0415580:CDS
AAAGGCCTTGCTCTTAACCG+GGG 0.699682 3_2:-61891330 None:intergenic
ACAAGCTGTGAAACACATGT+CGG 0.712695 3_2:-61890792 None:intergenic
TCCACATGTTAAGGACAGAG+CGG 0.719995 3_2:+61890923 Msa0415580:CDS
TTAGGTAGTGTGATACAATG+TGG 0.720681 3_2:+61891629 Msa0415580:CDS
GTTTGACTAAGAGACAACAG+AGG 0.813602 3_2:-61891518 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTAAAAAAATATGAAATTT+GGG - chr3_2:61887706-61887725 None:intergenic 10.0%
!! AGTTAAAAAAATATGAAATT+TGG - chr3_2:61887707-61887726 None:intergenic 10.0%
!!! TTTTTTTAACTGTATTTTTA+TGG + chr3_2:61887716-61887735 Msa0415580:intron 10.0%
!! ATTTAACAATGAAATTTAAA+AGG - chr3_2:61888404-61888423 None:intergenic 10.0%
!! TTTAAATTTCATTGTTAAAT+AGG + chr3_2:61888404-61888423 Msa0415580:intron 10.0%
!!! GATTTTAATTTCTTATATAT+TGG + chr3_2:61888524-61888543 Msa0415580:intron 10.0%
!!! TTTTTTTTCATGTTATATAA+TGG + chr3_2:61888644-61888663 Msa0415580:intron 10.0%
!!! TTTACTATTATTTTTGTTTT+AGG + chr3_2:61892386-61892405 Msa0415580:intron 10.0%
!! AAATATTCATGAATTAATAA+AGG - chr3_2:61893284-61893303 None:intergenic 10.0%
!!! TTATTAATTCATGAATATTT+TGG + chr3_2:61893284-61893303 Msa0415580:three_prime_UTR 10.0%
!!! TATTAATTCATGAATATTTT+GGG + chr3_2:61893285-61893304 Msa0415580:three_prime_UTR 10.0%
!! TTGTTTATTAAGGATTTATT+TGG - chr3_2:61887257-61887276 None:intergenic 15.0%
!!! TCTAATTTTCTACAAATTAA+AGG - chr3_2:61888594-61888613 None:intergenic 15.0%
!!! AAGTTTGAAAGAATAATTTT+TGG + chr3_2:61888851-61888870 Msa0415580:intron 15.0%
!!! AATTTTTGGTCTAATAATTA+CGG + chr3_2:61888865-61888884 Msa0415580:intron 15.0%
!!! TTAAGTTGTTTAATGAAATA+GGG - chr3_2:61892120-61892139 None:intergenic 15.0%
!!! ATTAAGTTGTTTAATGAAAT+AGG - chr3_2:61892121-61892140 None:intergenic 15.0%
!!! TTTCGTGTTTATATATTTTT+TGG + chr3_2:61893024-61893043 Msa0415580:three_prime_UTR 15.0%
!! ATAAATATGAAATTGAAACT+AGG + chr3_2:61893115-61893134 Msa0415580:three_prime_UTR 15.0%
!!! AAAGCATCTAAATAATGATA+AGG + chr3_2:61887381-61887400 Msa0415580:five_prime_UTR 20.0%
!! AGAAAATTGGTATGAAAAAT+AGG - chr3_2:61887595-61887614 None:intergenic 20.0%
!!! TTGAAACATTTTGAAAATCA+TGG + chr3_2:61887636-61887655 Msa0415580:intron 20.0%
!!! TGATTTTCTCAAATTCTTAA+CGG + chr3_2:61887892-61887911 Msa0415580:intron 20.0%
!!! AGTGCTGAAAAATTAAATAT+GGG - chr3_2:61888069-61888088 None:intergenic 20.0%
!!! TAGTGCTGAAAAATTAAATA+TGG - chr3_2:61888070-61888089 None:intergenic 20.0%
!!! AAATTTAAAAGGCAAGATTT+TGG - chr3_2:61888393-61888412 None:intergenic 20.0%
!! ATATGAAAGAAAAATCCAAT+TGG + chr3_2:61888496-61888515 Msa0415580:intron 20.0%
!!! TTTCAAACTTTAGAATCATA+TGG - chr3_2:61888841-61888860 None:intergenic 20.0%
!! TATCTATAATCAAAGTAAAC+AGG - chr3_2:61889194-61889213 None:intergenic 20.0%
!!! ATTTTACAGCAAAATCAAAT+CGG + chr3_2:61889569-61889588 Msa0415580:intron 20.0%
!!! AATTCTCTTCTTTTTTTTCT+TGG + chr3_2:61889639-61889658 Msa0415580:intron 20.0%
!!! CATTTATGTCATTATTTTGA+AGG + chr3_2:61889744-61889763 Msa0415580:intron 20.0%
!!! TAAATCTGACTTTTATTCAT+CGG + chr3_2:61889834-61889853 Msa0415580:CDS 20.0%
!! TGAATATCTGGATTAATATA+TGG - chr3_2:61889913-61889932 None:intergenic 20.0%
!! TTTATATTGCTATGAATATC+TGG - chr3_2:61889925-61889944 None:intergenic 20.0%
!! TATGTTAAAATGATATCTTG+TGG + chr3_2:61890975-61890994 Msa0415580:CDS 20.0%
!! AAACATAACTGTTATAATTG+CGG + chr3_2:61891254-61891273 Msa0415580:CDS 20.0%
!! AATGAAATTTCAACTAGAAA+GGG - chr3_2:61891850-61891869 None:intergenic 20.0%
!! AAATGAAATTTCAACTAGAA+AGG - chr3_2:61891851-61891870 None:intergenic 20.0%
!!! ATTTTTTTTGACTACGATTA+AGG - chr3_2:61892943-61892962 None:intergenic 20.0%
! ATGGTTGCATTTGTTTATTA+AGG - chr3_2:61887267-61887286 None:intergenic 25.0%
! TAAACAAATGCAACCATAAA+AGG + chr3_2:61887270-61887289 Msa0415580:five_prime_UTR 25.0%
! AGAACATAACATAAGAAAAC+AGG - chr3_2:61887337-61887356 None:intergenic 25.0%
! AAGAATAACATAAGAGACAA+AGG - chr3_2:61887447-61887466 None:intergenic 25.0%
!! TCATTTCTTTGTTAGTTTGA+TGG - chr3_2:61887483-61887502 None:intergenic 25.0%
! AACTAACAAAGAAATGACAA+TGG + chr3_2:61887486-61887505 Msa0415580:exon 25.0%
! GTGAAGAAGAAAAAGAAAAT+TGG - chr3_2:61887608-61887627 None:intergenic 25.0%
! TCAAAATGTTTCAAGAGAAA+AGG - chr3_2:61887630-61887649 None:intergenic 25.0%
! AATATGAAATTTGGGAAACA+AGG - chr3_2:61887698-61887717 None:intergenic 25.0%
! AAACAAACATTTAGTCACAT+TGG - chr3_2:61888185-61888204 None:intergenic 25.0%
! GCAATTGTATCTATAAAGAA+AGG + chr3_2:61888253-61888272 Msa0415580:CDS 25.0%
!! AGACTAAGAAATTTGATAAC+AGG - chr3_2:61888368-61888387 None:intergenic 25.0%
! TTCTTTCATATGACAAGAAT+CGG - chr3_2:61888487-61888506 None:intergenic 25.0%
! AATTAAAATCCAAGACCAAT+TGG - chr3_2:61888514-61888533 None:intergenic 25.0%
! TTCATGTTATATAATGGTGA+AGG + chr3_2:61888650-61888669 Msa0415580:intron 25.0%
!! CTTAAACTACTAAAAGCTTT+TGG - chr3_2:61889286-61889305 None:intergenic 25.0%
!! ACTTTTATGATAAACGTTCT+TGG + chr3_2:61889473-61889492 Msa0415580:intron 25.0%
!! CTTTTATGATAAACGTTCTT+GGG + chr3_2:61889474-61889493 Msa0415580:intron 25.0%
! GATTAATATATGGAGAACTT+GGG - chr3_2:61889903-61889922 None:intergenic 25.0%
!! ATTTTGTACATCTAACATTG+CGG - chr3_2:61890151-61890170 None:intergenic 25.0%
!! TAAGAGAATCAACTATTTTC+GGG - chr3_2:61890287-61890306 None:intergenic 25.0%
!! CTAAGAGAATCAACTATTTT+CGG - chr3_2:61890288-61890307 None:intergenic 25.0%
! ATTCTAAATTGTGCTGAATA+TGG - chr3_2:61891668-61891687 None:intergenic 25.0%
!! GTTGTTGTCATTTATCTTTA+AGG + chr3_2:61892094-61892113 Msa0415580:intron 25.0%
! TTAAATACGACAATCCAAAT+AGG + chr3_2:61892278-61892297 Msa0415580:intron 25.0%
! GTAGCGTAATCATTATAATT+TGG + chr3_2:61892459-61892478 Msa0415580:intron 25.0%
! ACAAGAATTTCTTCCAAATT+TGG + chr3_2:61892576-61892595 Msa0415580:CDS 25.0%
! ATGCACTAGAGAATATTATA+GGG - chr3_2:61892663-61892682 None:intergenic 25.0%
! AATGCACTAGAGAATATTAT+AGG - chr3_2:61892664-61892683 None:intergenic 25.0%
! AGTGCATTAAAATCCAAATT+TGG + chr3_2:61892676-61892695 Msa0415580:CDS 25.0%
! GTGCATTAAAATCCAAATTT+GGG + chr3_2:61892677-61892696 Msa0415580:CDS 25.0%
!!! GAGAAGTATTCTTCTTAAAA+AGG + chr3_2:61892699-61892718 Msa0415580:CDS 25.0%
!!! GCTAACTAATACTACTTTTA+TGG + chr3_2:61892898-61892917 Msa0415580:three_prime_UTR 25.0%
!!! TTTATATATTTTTTGGCAGC+CGG + chr3_2:61893031-61893050 Msa0415580:three_prime_UTR 25.0%
! AAATTATGAGACACTCTTAT+TGG - chr3_2:61893334-61893353 None:intergenic 25.0%
ATCTGTTTATTTCACTTCGT+AGG - chr3_2:61887207-61887226 None:intergenic 30.0%
AAGTGTTACCTTCAAAATTC+TGG - chr3_2:61887810-61887829 None:intergenic 30.0%
!! AGAATTTTGAAGGTAACACT+TGG + chr3_2:61887809-61887828 Msa0415580:intron 30.0%
!! GAATTTTGAAGGTAACACTT+GGG + chr3_2:61887810-61887829 Msa0415580:intron 30.0%
TTCAGTCTAACTATATGTGT+CGG - chr3_2:61887867-61887886 None:intergenic 30.0%
TGAATCATTGATACAGACAT+CGG - chr3_2:61887945-61887964 None:intergenic 30.0%
TATCAATGATTCATAGCACT+TGG + chr3_2:61887952-61887971 Msa0415580:intron 30.0%
ATCAATGATTCATAGCACTT+GGG + chr3_2:61887953-61887972 Msa0415580:intron 30.0%
!! AATTTTTCAGATTCTCTAGG+AGG - chr3_2:61888214-61888233 None:intergenic 30.0%
TCCTAGAGAATCTGAAAAAT+TGG + chr3_2:61888213-61888232 Msa0415580:intron 30.0%
!! ACCAATTTTTCAGATTCTCT+AGG - chr3_2:61888217-61888236 None:intergenic 30.0%
!!! ATTGGTTTGTTTTGTTGTTC+AGG + chr3_2:61888231-61888250 Msa0415580:intron 30.0%
! AAGAAAAATCCAATTGGTCT+TGG + chr3_2:61888502-61888521 Msa0415580:intron 30.0%
! TATCTAGGATGAGAGAAATT+TGG + chr3_2:61888702-61888721 Msa0415580:intron 30.0%
GATTTGAACTTTGTACTTTG+AGG + chr3_2:61889073-61889092 Msa0415580:intron 30.0%
! TATATGACAAAGAGTACATG+AGG - chr3_2:61889132-61889151 None:intergenic 30.0%
CTCTTTGTCATATACATTTG+AGG + chr3_2:61889138-61889157 Msa0415580:intron 30.0%
! GAAGACCAAGATTTTTCTTT+CGG - chr3_2:61889360-61889379 None:intergenic 30.0%
GGATTAATATATGGAGAACT+TGG - chr3_2:61889904-61889923 None:intergenic 30.0%
! TTTCGAAAAAGAGTACAAGA+AGG + chr3_2:61889954-61889973 Msa0415580:CDS 30.0%
TGTAGGAAACAATGTATTGA+AGG + chr3_2:61890020-61890039 Msa0415580:CDS 30.0%
TATTGAAGGATGTCATGATA+TGG + chr3_2:61890034-61890053 Msa0415580:CDS 30.0%
ATTGAAGGATGTCATGATAT+GGG + chr3_2:61890035-61890054 Msa0415580:CDS 30.0%
GATGTACAAAATGTAGCTTT+AGG + chr3_2:61890159-61890178 Msa0415580:CDS 30.0%
! AAGAGAATCAACTATTTTCG+GGG - chr3_2:61890286-61890305 None:intergenic 30.0%
! TTAAGAGACTCAACTTCTTT+TGG - chr3_2:61890606-61890625 None:intergenic 30.0%
AAAAGAAGTTGAGTCTCTTA+AGG + chr3_2:61890605-61890624 Msa0415580:CDS 30.0%
AAAGAAGTTGAGTCTCTTAA+GGG + chr3_2:61890606-61890625 Msa0415580:CDS 30.0%
! AGTATTGTACTTAAAGCGTT+CGG - chr3_2:61890694-61890713 None:intergenic 30.0%
TTTAAGTACAATACTTCGAC+TGG + chr3_2:61890699-61890718 Msa0415580:CDS 30.0%
! GATTTTGTTCAAGTATCTTG+TGG + chr3_2:61890822-61890841 Msa0415580:CDS 30.0%
ACTTTAGCACTTACTAACAT+GGG + chr3_2:61890855-61890874 Msa0415580:CDS 30.0%
! ATGGGAAAAGTTTTTGCAAT+GGG + chr3_2:61890873-61890892 Msa0415580:CDS 30.0%
AAGTGCAAAATATGGACAAT+TGG + chr3_2:61890896-61890915 Msa0415580:CDS 30.0%
AGTGCAAAATATGGACAATT+GGG + chr3_2:61890897-61890916 Msa0415580:CDS 30.0%
! GATTGGTCACTAATTGAAAT+AGG - chr3_2:61891191-61891210 None:intergenic 30.0%
TACAACCATTACAACTTGAT+TGG - chr3_2:61891208-61891227 None:intergenic 30.0%
! AATCAAGTTGTAATGGTTGT+AGG + chr3_2:61891207-61891226 Msa0415580:CDS 30.0%
TTCTTCTATGAGCAACTTAT+CGG - chr3_2:61891738-61891757 None:intergenic 30.0%
TCCAAAGTAATGAAATGACA+TGG - chr3_2:61891907-61891926 None:intergenic 30.0%
GTCATTTCATTACTTTGGAT+AGG + chr3_2:61891908-61891927 Msa0415580:intron 30.0%
AAAAGAGGTCATAAAAGCTT+TGG + chr3_2:61892046-61892065 Msa0415580:intron 30.0%
! TCATAAAAGCTTTGGCATTA+AGG + chr3_2:61892054-61892073 Msa0415580:intron 30.0%
! CATAAAAGCTTTGGCATTAA+GGG + chr3_2:61892055-61892074 Msa0415580:intron 30.0%
TGTTTATGTATAAGCTATCC+TGG + chr3_2:61892170-61892189 Msa0415580:intron 30.0%
TCATGGAAATCAACTGTTTA+TGG + chr3_2:61892318-61892337 Msa0415580:intron 30.0%
CATGGAAATCAACTGTTTAT+GGG + chr3_2:61892319-61892338 Msa0415580:intron 30.0%
ATCTCAGGAAAAGATAATCA+TGG + chr3_2:61892532-61892551 Msa0415580:CDS 30.0%
CTGTTCATATCAGTATGTAT+AGG - chr3_2:61892604-61892623 None:intergenic 30.0%
TGCACTAGAGAATATTATAG+GGG - chr3_2:61892662-61892681 None:intergenic 30.0%
AAGAATACTTCTCCCAAATT+TGG - chr3_2:61892692-61892711 None:intergenic 30.0%
TGACTACGATTAAGGAAATT+AGG - chr3_2:61892935-61892954 None:intergenic 30.0%
AATACTGCATCTTAATTTCG+TGG + chr3_2:61892978-61892997 Msa0415580:three_prime_UTR 30.0%
! CTTCTCTTCTCTTCCTTTTA+TGG - chr3_2:61887286-61887305 None:intergenic 35.0%
GTTCATTGTTTCACAATAGG+TGG - chr3_2:61887409-61887428 None:intergenic 35.0%
GAGGTTCATTGTTTCACAAT+AGG - chr3_2:61887412-61887431 None:intergenic 35.0%
GACAATGGAAGAAGTTTCTT+TGG + chr3_2:61887501-61887520 Msa0415580:CDS 35.0%
GTTCAACAGCTCTATCAAAA+GGG - chr3_2:61887537-61887556 None:intergenic 35.0%
TGTTCAACAGCTCTATCAAA+AGG - chr3_2:61887538-61887557 None:intergenic 35.0%
! TTTTGATAGAGCTGTTGAAC+AGG + chr3_2:61887537-61887556 Msa0415580:CDS 35.0%
ATAGTTTATGCACATTGCAC+AGG - chr3_2:61887776-61887795 None:intergenic 35.0%
! ATGTGAGTCCAGAATTTTGA+AGG + chr3_2:61887799-61887818 Msa0415580:intron 35.0%
TCTCAAATTCTTAACGGTGT+CGG + chr3_2:61887898-61887917 Msa0415580:intron 35.0%
TTCATCTCATTCATGCATAC+CGG - chr3_2:61888340-61888359 None:intergenic 35.0%
! TGTTAAATAGGCATTGTAGC+TGG + chr3_2:61888416-61888435 Msa0415580:intron 35.0%
! TAATGTATATCCTTTTCCCC+TGG + chr3_2:61888676-61888695 Msa0415580:intron 35.0%
TCTCATCCTAGATATAACCA+GGG - chr3_2:61888696-61888715 None:intergenic 35.0%
AGGATGAGAGAAATTTGGTA+TGG + chr3_2:61888707-61888726 Msa0415580:intron 35.0%
GGAGTAACCAAAATTGTTCA+AGG + chr3_2:61888766-61888785 Msa0415580:CDS 35.0%
AACCAAAATTGTTCAAGGAG+AGG + chr3_2:61888771-61888790 Msa0415580:CDS 35.0%
ACCAAAATTGTTCAAGGAGA+GGG + chr3_2:61888772-61888791 Msa0415580:CDS 35.0%
! TCTGAGACCTTATCTGAAAA+TGG - chr3_2:61888895-61888914 None:intergenic 35.0%
! AAATGAATGGCACTCCTTTT+CGG - chr3_2:61888930-61888949 None:intergenic 35.0%
CATAGATCAGGGAAAATGAA+TGG - chr3_2:61888943-61888962 None:intergenic 35.0%
! TTTTCCCTGATCTATGCTAA+TGG + chr3_2:61888947-61888966 Msa0415580:intron 35.0%
TTCACCATTAGCATAGATCA+GGG - chr3_2:61888954-61888973 None:intergenic 35.0%
GATTGAAAGCTGTGATTTCT+AGG + chr3_2:61889251-61889270 Msa0415580:CDS 35.0%
!! TACTAAAAGCTTTTGGTTGC+TGG - chr3_2:61889279-61889298 None:intergenic 35.0%
AGTAGTTTAAGAAGCTGCAA+AGG + chr3_2:61889295-61889314 Msa0415580:CDS 35.0%
TTACGCCGAAAGAAAAATCT+TGG + chr3_2:61889352-61889371 Msa0415580:CDS 35.0%
TGAAACCTGAGTAAATTGAG+AGG - chr3_2:61889392-61889411 None:intergenic 35.0%
!! CTACTTTGTCACTTTCAGAA+CGG + chr3_2:61889788-61889807 Msa0415580:CDS 35.0%
TACATTGTTTCCTACAAGTG+CGG - chr3_2:61890016-61890035 None:intergenic 35.0%
TTGAAGGATGTCATGATATG+GGG + chr3_2:61890036-61890055 Msa0415580:CDS 35.0%
TTTCATTCACAATCCCTACA+AGG - chr3_2:61890077-61890096 None:intergenic 35.0%
TTGTAGGGATTGTGAATGAA+AGG + chr3_2:61890076-61890095 Msa0415580:CDS 35.0%
!! GTACAAAATGTAGCTTTAGG+AGG + chr3_2:61890162-61890181 Msa0415580:CDS 35.0%
CTGCAATAGTTACGAAACAA+GGG + chr3_2:61890193-61890212 Msa0415580:CDS 35.0%
TGCAATAGTTACGAAACAAG+GGG + chr3_2:61890194-61890213 Msa0415580:CDS 35.0%
GTTAGGGCAAAGAATTGATA+TGG + chr3_2:61890251-61890270 Msa0415580:CDS 35.0%
CGTGTAAAAAAAGTTGCTTG+TGG + chr3_2:61890315-61890334 Msa0415580:CDS 35.0%
GTATCATACATGTGCTTTGA+CGG + chr3_2:61890341-61890360 Msa0415580:CDS 35.0%
GAAAGACTCTTGTTCAGATT+TGG + chr3_2:61890389-61890408 Msa0415580:CDS 35.0%
!! TGTTCAGATTTGGTTGATGA+AGG + chr3_2:61890399-61890418 Msa0415580:CDS 35.0%
!! GTTCAGATTTGGTTGATGAA+GGG + chr3_2:61890400-61890419 Msa0415580:CDS 35.0%
AAACTTTCATTACCTGTCGA+AGG + chr3_2:61890450-61890469 Msa0415580:CDS 35.0%
GAAATACTAATACCTTCGAC+AGG - chr3_2:61890465-61890484 None:intergenic 35.0%
GACTTTAGCACTTACTAACA+TGG + chr3_2:61890854-61890873 Msa0415580:CDS 35.0%
! CATGGGAAAAGTTTTTGCAA+TGG + chr3_2:61890872-61890891 Msa0415580:CDS 35.0%
ATTGGGAAATCCACATGTTA+AGG + chr3_2:61890914-61890933 Msa0415580:CDS 35.0%
!!! TTGCTGTTTTGACATCTTCA+GGG + chr3_2:61891009-61891028 Msa0415580:CDS 35.0%
AAAGGTGAAAATGGAGAACT+AGG + chr3_2:61891050-61891069 Msa0415580:CDS 35.0%
AAGGTGAAAATGGAGAACTA+GGG + chr3_2:61891051-61891070 Msa0415580:CDS 35.0%
CAACAAAACAAGGTGTGTAT+CGG - chr3_2:61891094-61891113 None:intergenic 35.0%
!!! ATACACACCTTGTTTTGTTG+AGG + chr3_2:61891094-61891113 Msa0415580:CDS 35.0%
CTTAAAGCCTCAACAAAACA+AGG - chr3_2:61891104-61891123 None:intergenic 35.0%
!! TTGTTGAGGCTTTAAGAGAT+AGG + chr3_2:61891108-61891127 Msa0415580:CDS 35.0%
CATATTGCAACTGTGAAACT+TGG - chr3_2:61891158-61891177 None:intergenic 35.0%
! AGTGACCAATCAAGTTGTAA+TGG + chr3_2:61891200-61891219 Msa0415580:CDS 35.0%
!!! CTTTTTTGCTACTACAACTG+CGG - chr3_2:61891292-61891311 None:intergenic 35.0%
TCGTGCTTCAATAAAAAGCA+AGG + chr3_2:61891365-61891384 Msa0415580:CDS 35.0%
AAGTAGTGAACGTTCATCTA+TGG + chr3_2:61891388-61891407 Msa0415580:CDS 35.0%
GGAGAAACAAATGTGACAAA+TGG + chr3_2:61891494-61891513 Msa0415580:CDS 35.0%
AAATCCAACATGAAAGCCAA+CGG + chr3_2:61891582-61891601 Msa0415580:CDS 35.0%
GAAGATAGTTCTTCTACGTT+AGG + chr3_2:61891611-61891630 Msa0415580:CDS 35.0%
TTAGGTAGTGTGATACAATG+TGG + chr3_2:61891629-61891648 Msa0415580:CDS 35.0%
AAACAATTTGTGCCTGAAAG+TGG - chr3_2:61891791-61891810 None:intergenic 35.0%
ATTTCAACTAGAAAGGGAAC+AGG - chr3_2:61891844-61891863 None:intergenic 35.0%
! GCCATGTCATTTCATTACTT+TGG + chr3_2:61891903-61891922 Msa0415580:intron 35.0%
GTTGACACTCTTGTATTTCT+TGG - chr3_2:61891968-61891987 None:intergenic 35.0%
GATAATCTCACAAGTGCTTA+CGG + chr3_2:61892243-61892262 Msa0415580:intron 35.0%
TTTAGGCCTCAAAGTCATAT+TGG + chr3_2:61892403-61892422 Msa0415580:intron 35.0%
TTAGGCCTCAAAGTCATATT+GGG + chr3_2:61892404-61892423 Msa0415580:intron 35.0%
TAATCATGGCCTAGAACAAA+AGG + chr3_2:61892546-61892565 Msa0415580:CDS 35.0%
GTATGTATAGGTGCCAAATT+TGG - chr3_2:61892592-61892611 None:intergenic 35.0%
TCAACAAGAGAATGCATTGA+AGG + chr3_2:61892747-61892766 Msa0415580:CDS 35.0%
AGAATGCATTGAAGGTTGAA+TGG + chr3_2:61892755-61892774 Msa0415580:CDS 35.0%
GAATGCATTGAAGGTTGAAT+GGG + chr3_2:61892756-61892775 Msa0415580:CDS 35.0%
! TGGGTTGAACAATATGAGAA+TGG + chr3_2:61892775-61892794 Msa0415580:CDS 35.0%
AGAAAACTGCTAGAGATGAA+TGG - chr3_2:61893163-61893182 None:intergenic 35.0%
TTCACCATAGTTCTTAGTGT+AGG + chr3_2:61893182-61893201 Msa0415580:three_prime_UTR 35.0%
ACAAAGGAAACAGAAGAAGG+AGG - chr3_2:61887431-61887450 None:intergenic 40.0%
GAGACAAAGGAAACAGAAGA+AGG - chr3_2:61887434-61887453 None:intergenic 40.0%
ATGGAAGAAGTTTCTTTGGC+TGG + chr3_2:61887505-61887524 Msa0415580:CDS 40.0%
AACAGCTCTATCAAAAGGGA+GGG - chr3_2:61887533-61887552 None:intergenic 40.0%
! CTAACTATATGTGTCGGTGT+CGG - chr3_2:61887861-61887880 None:intergenic 40.0%
GGTGCATATTTACTCAAGTG+TGG + chr3_2:61888274-61888293 Msa0415580:CDS 40.0%
TTACTCAAGTGTGGTAACAG+AGG + chr3_2:61888283-61888302 Msa0415580:CDS 40.0%
CTAGATATAACCAGGGGAAA+AGG - chr3_2:61888689-61888708 None:intergenic 40.0%
! CTTTTCCCCTGGTTATATCT+AGG + chr3_2:61888687-61888706 Msa0415580:intron 40.0%
CTCATCCTAGATATAACCAG+GGG - chr3_2:61888695-61888714 None:intergenic 40.0%
CTCTCATCCTAGATATAACC+AGG - chr3_2:61888697-61888716 None:intergenic 40.0%
AGAAATTTGGTATGGTGCTC+AGG + chr3_2:61888715-61888734 Msa0415580:CDS 40.0%
GAAATTTGGTATGGTGCTCA+GGG + chr3_2:61888716-61888735 Msa0415580:CDS 40.0%
!! GAAAAGCATTTGCGATTGAG+CGG + chr3_2:61888745-61888764 Msa0415580:CDS 40.0%
! TCCCTCTCCTTGAACAATTT+TGG - chr3_2:61888776-61888795 None:intergenic 40.0%
GAGACAAAACGAAACCGAAA+AGG + chr3_2:61888913-61888932 Msa0415580:intron 40.0%
GTTCACCATTAGCATAGATC+AGG - chr3_2:61888955-61888974 None:intergenic 40.0%
! CATTTTACAACCGTCTCTGA+GGG + chr3_2:61889050-61889069 Msa0415580:intron 40.0%
! ATTTTACAACCGTCTCTGAG+GGG + chr3_2:61889051-61889070 Msa0415580:intron 40.0%
TCAACTCAGATGTAAGACTC+TGG - chr3_2:61889107-61889126 None:intergenic 40.0%
TTTCGGCGTAAAATTCCAGA+GGG - chr3_2:61889343-61889362 None:intergenic 40.0%
!! CGTTCTGAAAGTGACAAAGT+AGG - chr3_2:61889790-61889809 None:intergenic 40.0%
! TCAGAACGGTGTTTTTCTGA+CGG + chr3_2:61889802-61889821 Msa0415580:CDS 40.0%
TTGTACATCTAACATTGCGG+TGG - chr3_2:61890148-61890167 None:intergenic 40.0%
GTTTCGTAACTATTGCAGCA+TGG - chr3_2:61890191-61890210 None:intergenic 40.0%
GCTGCAATAGTTACGAAACA+AGG + chr3_2:61890192-61890211 Msa0415580:CDS 40.0%
AAGGGAGAATTAGAAGTCAG+TGG + chr3_2:61890418-61890437 Msa0415580:CDS 40.0%
AGTATTTCCAGCATTGCTTG+TGG + chr3_2:61890477-61890496 Msa0415580:CDS 40.0%
ACGTATGGAGATGGTACATT+TGG + chr3_2:61890543-61890562 Msa0415580:CDS 40.0%
! GATGGTACATTTGGAGTACT+TGG + chr3_2:61890552-61890571 Msa0415580:CDS 40.0%
! ACATTTGGAGTACTTGGACA+TGG + chr3_2:61890558-61890577 Msa0415580:CDS 40.0%
! CATTTGGAGTACTTGGACAT+GGG + chr3_2:61890559-61890578 Msa0415580:CDS 40.0%
GACTGGTAAGCTGTTTACAT+GGG + chr3_2:61890716-61890735 Msa0415580:CDS 40.0%
ACTGGTAAGCTGTTTACATG+GGG + chr3_2:61890717-61890736 Msa0415580:CDS 40.0%
ACAAGCTGTGAAACACATGT+CGG - chr3_2:61890795-61890814 None:intergenic 40.0%
! GCAATGGGAAGTGCAAAATA+TGG + chr3_2:61890888-61890907 Msa0415580:CDS 40.0%
!!! GTTGCTGTTTTGACATCTTC+AGG + chr3_2:61891008-61891027 Msa0415580:CDS 40.0%
!!! ACAAGGTGTGTATCGGTTTT+CGG - chr3_2:61891087-61891106 None:intergenic 40.0%
AATGGTTGTAGGTTACCGTT+TGG + chr3_2:61891218-61891237 Msa0415580:CDS 40.0%
TTCTTCCTTGTGAAGCCAAA+CGG - chr3_2:61891236-61891255 None:intergenic 40.0%
GCAACAATCAGCAGATACAA+AGG + chr3_2:61891432-61891451 Msa0415580:CDS 40.0%
AGGCATCATCAGAACATGAT+TGG + chr3_2:61891452-61891471 Msa0415580:CDS 40.0%
GTTTGACTAAGAGACAACAG+AGG - chr3_2:61891521-61891540 None:intergenic 40.0%
CTCTTAGTCAAACGTGTTAC+CGG + chr3_2:61891528-61891547 Msa0415580:CDS 40.0%
! TTCCACTAGGCATGTTTTTC+CGG - chr3_2:61891550-61891569 None:intergenic 40.0%
AATCCAACATGAAAGCCAAC+GGG + chr3_2:61891583-61891602 Msa0415580:CDS 40.0%
AACTATCTTCTACATCCCGT+TGG - chr3_2:61891601-61891620 None:intergenic 40.0%
AGTGTGATACAATGTGGACA+AGG + chr3_2:61891635-61891654 Msa0415580:CDS 40.0%
TGCTCATAGAAGAAGTTCAG+AGG + chr3_2:61891744-61891763 Msa0415580:CDS 40.0%
! AGAGTGTCAACAAAAAGTCG+AGG + chr3_2:61891977-61891996 Msa0415580:CDS 40.0%
AACAAAAAGTCGAGGAGAGT+TGG + chr3_2:61891985-61892004 Msa0415580:CDS 40.0%
TAAGTGCAAAGCAGCAAAAG+AGG + chr3_2:61892031-61892050 Msa0415580:CDS 40.0%
ATCCAAGTTGCTGCATATCA+TGG + chr3_2:61892301-61892320 Msa0415580:intron 40.0%
TTCCATGATATGCAGCAACT+TGG - chr3_2:61892306-61892325 None:intergenic 40.0%
! TTAAGGCCTTTTTCTCCACT+CGG - chr3_2:61892826-61892845 None:intergenic 40.0%
ACCTAAATCTCACACGCTTA+AGG - chr3_2:61892843-61892862 None:intergenic 40.0%
TTTCGCAGAAAGAAGCTGAA+AGG + chr3_2:61893061-61893080 Msa0415580:three_prime_UTR 40.0%
ACCATAGTTCTTAGTGTAGG+AGG + chr3_2:61893185-61893204 Msa0415580:three_prime_UTR 40.0%
ACCTCCTACACTAAGAACTA+TGG - chr3_2:61893189-61893208 None:intergenic 40.0%
GGTTAGACAGAGTGTAAGAG+TGG - chr3_2:61887316-61887335 None:intergenic 45.0%
CAACAGCTCTATCAAAAGGG+AGG - chr3_2:61887534-61887553 None:intergenic 45.0%
TTGAAGGTAACACTTGGGCT+AGG + chr3_2:61887815-61887834 Msa0415580:intron 45.0%
! CAAATTCTTAACGGTGTCGG+TGG + chr3_2:61887901-61887920 Msa0415580:intron 45.0%
TACAGACATCGGACATGACA+CGG - chr3_2:61887934-61887953 None:intergenic 45.0%
! AGTCGGAAAGGACAGAGTTT+TGG - chr3_2:61888313-61888332 None:intergenic 45.0%
TCATGCATACCGGAGAAAGT+CGG - chr3_2:61888330-61888349 None:intergenic 45.0%
! AATAGGCATTGTAGCTGGCA+TGG + chr3_2:61888421-61888440 Msa0415580:intron 45.0%
CCTAGTAGATCGTGACAACA+AGG - chr3_2:61888447-61888466 None:intergenic 45.0%
! CCTTGTTGTCACGATCTACT+AGG + chr3_2:61888444-61888463 Msa0415580:intron 45.0%
ATCTACTAGGATTCAGCCCT+TGG + chr3_2:61888457-61888476 Msa0415580:intron 45.0%
GACAAGAATCGGAACACCAA+GGG - chr3_2:61888476-61888495 None:intergenic 45.0%
TGACAAGAATCGGAACACCA+AGG - chr3_2:61888477-61888496 None:intergenic 45.0%
! CGGCTCACCATTTTCAGATA+AGG + chr3_2:61888885-61888904 Msa0415580:intron 45.0%
TGGTGAACACTCTCTTGATC+TGG + chr3_2:61888967-61888986 Msa0415580:intron 45.0%
CCTCAGAGACGGTTGTAAAA+TGG - chr3_2:61889052-61889071 None:intergenic 45.0%
! CCATTTTACAACCGTCTCTG+AGG + chr3_2:61889049-61889068 Msa0415580:intron 45.0%
AGTTCAAATCCCCTCAGAGA+CGG - chr3_2:61889063-61889082 None:intergenic 45.0%
ACAAAGCACAAGCTGCTACT+TGG + chr3_2:61889221-61889240 Msa0415580:CDS 45.0%
!! CAAGCTGCTACTTGGTTTGT+TGG + chr3_2:61889229-61889248 Msa0415580:CDS 45.0%
CTTTCGGCGTAAAATTCCAG+AGG - chr3_2:61889344-61889363 None:intergenic 45.0%
TGACGCCTCTCAATTTACTC+AGG + chr3_2:61889384-61889403 Msa0415580:CDS 45.0%
CTCGTGTTTGTGAATCAACG+TGG + chr3_2:61889543-61889562 Msa0415580:intron 45.0%
TATGCCATGAATGCTGGAGA+GGG - chr3_2:61889866-61889885 None:intergenic 45.0%
TTATGCCATGAATGCTGGAG+AGG - chr3_2:61889867-61889886 None:intergenic 45.0%
GTCTGTTATGCCATGAATGC+TGG - chr3_2:61889872-61889891 None:intergenic 45.0%
ATTGTTTCCTACAAGTGCGG+AGG - chr3_2:61890013-61890032 None:intergenic 45.0%
AAGGATGTCATGATATGGGG+TGG + chr3_2:61890039-61890058 Msa0415580:CDS 45.0%
!! ATGATATGGGGTGGTGGAAT+TGG + chr3_2:61890048-61890067 Msa0415580:CDS 45.0%
GTGGAATTGGTTGCCTTGTA+GGG + chr3_2:61890061-61890080 Msa0415580:CDS 45.0%
! GCGGTGGATTCTAGTAACTT+TGG - chr3_2:61890132-61890151 None:intergenic 45.0%
AACAAGGGGAAGTTTACTGC+TGG + chr3_2:61890208-61890227 Msa0415580:CDS 45.0%
ACAAGGGGAAGTTTACTGCT+GGG + chr3_2:61890209-61890228 Msa0415580:CDS 45.0%
AAGTTTACTGCTGGGGTCAA+GGG + chr3_2:61890217-61890236 Msa0415580:CDS 45.0%
! AAGGGAAGTGTGGAAGGTTA+GGG + chr3_2:61890235-61890254 Msa0415580:CDS 45.0%
!! ACATGTGCTTTGACGGATTC+CGG + chr3_2:61890348-61890367 Msa0415580:CDS 45.0%
ACTGCAATCGTCTCTAGTTG+CGG + chr3_2:61890510-61890529 Msa0415580:CDS 45.0%
CGGTTATTCACGTATGGAGA+TGG + chr3_2:61890534-61890553 Msa0415580:CDS 45.0%
CTCTTAAGGGTCTATGTGTG+AGG + chr3_2:61890619-61890638 Msa0415580:CDS 45.0%
TGCTTGTGGAACATGGCATA+CGG + chr3_2:61890647-61890666 Msa0415580:CDS 45.0%
CGACTGGTAAGCTGTTTACA+TGG + chr3_2:61890715-61890734 Msa0415580:CDS 45.0%
TCCACATGTTAAGGACAGAG+CGG + chr3_2:61890923-61890942 Msa0415580:CDS 45.0%
GAAAATGGAGAACTAGGGCT+AGG + chr3_2:61891056-61891075 Msa0415580:CDS 45.0%
!! TGAGGCTTTAAGAGATAGGC+AGG + chr3_2:61891112-61891131 Msa0415580:CDS 45.0%
TTTGAATGCATCTCTAGCCC+CGG + chr3_2:61891313-61891332 Msa0415580:CDS 45.0%
GCACGATTCACAAACACGAA+AGG - chr3_2:61891351-61891370 None:intergenic 45.0%
GGTGATGTCACTGAAGATAG+AGG + chr3_2:61891473-61891492 Msa0415580:CDS 45.0%
TACCGGAAAAACATGCCTAG+TGG + chr3_2:61891545-61891564 Msa0415580:CDS 45.0%
GGAAAAACATGCCTAGTGGA+AGG + chr3_2:61891549-61891568 Msa0415580:CDS 45.0%
AAACATGCCTAGTGGAAGGA+AGG + chr3_2:61891553-61891572 Msa0415580:CDS 45.0%
TTCCAAACCTTCCTTCCACT+AGG - chr3_2:61891563-61891582 None:intergenic 45.0%
GAGGTAATGACTCCACTTTC+AGG + chr3_2:61891776-61891795 Msa0415580:intron 45.0%
GTATAAGCTATCCTGGAGAG+TGG + chr3_2:61892177-61892196 Msa0415580:intron 45.0%
GCAGCAACTTGGATCCTATT+TGG - chr3_2:61892295-61892314 None:intergenic 45.0%
GCCTCAAAGTCATATTGGGT+TGG + chr3_2:61892408-61892427 Msa0415580:intron 45.0%
GCCAACCCAATATGACTTTG+AGG - chr3_2:61892412-61892431 None:intergenic 45.0%
ATGGCCTAGAACAAAAGGCT+GGG + chr3_2:61892551-61892570 Msa0415580:CDS 45.0%
CAGTCCAAGAAATGCCAACA+CGG + chr3_2:61892621-61892640 Msa0415580:CDS 45.0%
ATTCGATAGACTGTCCGTGT+TGG - chr3_2:61892638-61892657 None:intergenic 45.0%
GCCTTAAGCGTGTGAGATTT+AGG + chr3_2:61892839-61892858 Msa0415580:CDS 45.0%
CTTTCTGCGAAAATCGCTTC+CGG - chr3_2:61893053-61893072 None:intergenic 45.0%
AGAAAGAAGCTGAAAGGTGG+TGG + chr3_2:61893067-61893086 Msa0415580:three_prime_UTR 45.0%
GAAAGAAGCTGAAAGGTGGT+GGG + chr3_2:61893068-61893087 Msa0415580:three_prime_UTR 45.0%
CTTAGTGTAGGAGGTGATAC+TGG + chr3_2:61893194-61893213 Msa0415580:three_prime_UTR 45.0%
CTGTCCTTTCCGACTTTCTC+CGG + chr3_2:61888318-61888337 Msa0415580:CDS 50.0%
CATACCGGAGAAAGTCGGAA+AGG - chr3_2:61888325-61888344 None:intergenic 50.0%
AGTTGTGTCAGTAGTCCCTC+TGG + chr3_2:61889325-61889344 Msa0415580:CDS 50.0%
GATGTCATGATATGGGGTGG+TGG + chr3_2:61890042-61890061 Msa0415580:CDS 50.0%
GGTGGAATTGGTTGCCTTGT+AGG + chr3_2:61890060-61890079 Msa0415580:CDS 50.0%
CAAGGGGAAGTTTACTGCTG+GGG + chr3_2:61890210-61890229 Msa0415580:CDS 50.0%
GAAGTTTACTGCTGGGGTCA+AGG + chr3_2:61890216-61890235 Msa0415580:CDS 50.0%
! CAAGGGAAGTGTGGAAGGTT+AGG + chr3_2:61890234-61890253 Msa0415580:CDS 50.0%
ATTCCGGTGACGTATACACG+TGG + chr3_2:61890364-61890383 Msa0415580:CDS 50.0%
TTCCGGTGACGTATACACGT+GGG + chr3_2:61890365-61890384 Msa0415580:CDS 50.0%
CAATCGTCTCTAGTTGCGGT+CGG + chr3_2:61890514-61890533 Msa0415580:CDS 50.0%
TGCGGTCGGTTATTCACGTA+TGG + chr3_2:61890528-61890547 Msa0415580:CDS 50.0%
! TGTGTGAGGTCTGTTGCTTG+TGG + chr3_2:61890633-61890652 Msa0415580:CDS 50.0%
! GGTCTGTTGCTTGTGGAACA+TGG + chr3_2:61890640-61890659 Msa0415580:CDS 50.0%
ACATGGGGTGATGCAGATGA+AGG + chr3_2:61890732-61890751 Msa0415580:CDS 50.0%
CATGGGGTGATGCAGATGAA+GGG + chr3_2:61890733-61890752 Msa0415580:CDS 50.0%
ACCGCTCTGTCCTTAACATG+TGG - chr3_2:61890927-61890946 None:intergenic 50.0%
TGTTAAGGACAGAGCGGTTG+TGG + chr3_2:61890929-61890948 Msa0415580:CDS 50.0%
!! TTCAGGGAGTGTCTACACGT+GGG + chr3_2:61891025-61891044 Msa0415580:CDS 50.0%
ACGTGGGGCAAAGGTGAAAA+TGG + chr3_2:61891041-61891060 Msa0415580:CDS 50.0%
! GGTTACCGTTTGGCTTCACA+AGG + chr3_2:61891228-61891247 Msa0415580:CDS 50.0%
AAAGGCCTTGCTCTTAACCG+GGG - chr3_2:61891333-61891352 None:intergenic 50.0%
GAAAGGCCTTGCTCTTAACC+GGG - chr3_2:61891334-61891353 None:intergenic 50.0%
CGAAAGGCCTTGCTCTTAAC+CGG - chr3_2:61891335-61891354 None:intergenic 50.0%
TGCCTAGTGGAAGGAAGGTT+TGG + chr3_2:61891558-61891577 Msa0415580:CDS 50.0%
!! CATCCCGTTGGCTTTCATGT+TGG - chr3_2:61891589-61891608 None:intergenic 50.0%
! GAGTTGGTCTGTTGCCAAAG+AGG + chr3_2:61892001-61892020 Msa0415580:CDS 50.0%
GCACTTAGCAGCTTCCTCTT+TGG - chr3_2:61892018-61892037 None:intergenic 50.0%
CCATAATGTCTCCACTCTCC+AGG - chr3_2:61892191-61892210 None:intergenic 50.0%
CCTGGAGAGTGGAGACATTA+TGG + chr3_2:61892188-61892207 Msa0415580:intron 50.0%
TTGCAGCTTCACACGATCTC+AGG + chr3_2:61892517-61892536 Msa0415580:intron 50.0%
CATGGCCTAGAACAAAAGGC+TGG + chr3_2:61892550-61892569 Msa0415580:CDS 50.0%
! GTAGCCCAGCCTTTTGTTCT+AGG - chr3_2:61892558-61892577 None:intergenic 50.0%
! CTGTCCGTGTTGGCATTTCT+TGG - chr3_2:61892628-61892647 None:intergenic 50.0%
ACATTGACAAAGTCGCCGAG+TGG + chr3_2:61892808-61892827 Msa0415580:CDS 50.0%
AAGTCGCCGAGTGGAGAAAA+AGG + chr3_2:61892817-61892836 Msa0415580:CDS 50.0%
CGCAGAAAGAAGCTGAAAGG+TGG + chr3_2:61893064-61893083 Msa0415580:three_prime_UTR 50.0%
!! TAGGAGGTGATACTGGCTTC+AGG + chr3_2:61893201-61893220 Msa0415580:three_prime_UTR 50.0%
TCGTCCCTCTCCAGCATTCA+TGG + chr3_2:61889859-61889878 Msa0415580:CDS 55.0%
TTTCCTACAAGTGCGGAGGC+AGG - chr3_2:61890009-61890028 None:intergenic 55.0%
TCCGGTGACGTATACACGTG+GGG + chr3_2:61890366-61890385 Msa0415580:CDS 55.0%
CCATTCGCCACAAGCAATGC+TGG - chr3_2:61890487-61890506 None:intergenic 55.0%
CCAGCATTGCTTGTGGCGAA+TGG + chr3_2:61890484-61890503 Msa0415580:CDS 55.0%
GATGCAGATGAAGGGAGGCT+TGG + chr3_2:61890741-61890760 Msa0415580:CDS 55.0%
GACAGAGCGGTTGTGGTTGA+AGG + chr3_2:61890936-61890955 Msa0415580:CDS 55.0%
!! CTTCAGGGAGTGTCTACACG+TGG + chr3_2:61891024-61891043 Msa0415580:CDS 55.0%
!! TCAGGGAGTGTCTACACGTG+GGG + chr3_2:61891026-61891045 Msa0415580:CDS 55.0%
AGTGTCTACACGTGGGGCAA+AGG + chr3_2:61891032-61891051 Msa0415580:CDS 55.0%
TCTAGCCCCGGTTAAGAGCA+AGG + chr3_2:61891325-61891344 Msa0415580:CDS 55.0%
AGTTCAGAGGCTGAGAGCTG+AGG + chr3_2:61891757-61891776 Msa0415580:CDS 55.0%
!! CACTTGGGCTAGGAAGCGCT+AGG + chr3_2:61887825-61887844 Msa0415580:intron 60.0%
GGTATGGTGCTCAGGGAAGC+AGG + chr3_2:61888723-61888742 Msa0415580:CDS 60.0%
TGCTGGGGTCAAGGGAAGTG+TGG + chr3_2:61890225-61890244 Msa0415580:CDS 60.0%
! GGGGTCAAGGGAAGTGTGGA+AGG + chr3_2:61890229-61890248 Msa0415580:CDS 60.0%
CCCCCACGTGTATACGTCAC+CGG - chr3_2:61890370-61890389 None:intergenic 60.0%
CCGGTGACGTATACACGTGG+GGG + chr3_2:61890367-61890386 Msa0415580:CDS 60.0%
GGGGTGATGCAGATGAAGGG+AGG + chr3_2:61890736-61890755 Msa0415580:CDS 60.0%
CCTACAAGTGCGGAGGCAGG+AGG - chr3_2:61890006-61890025 None:intergenic 65.0%
CCTCCTGCCTCCGCACTTGT+AGG + chr3_2:61890003-61890022 Msa0415580:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 61887154 61893377 61887154 ID=Msa0415580;Name=Msa0415580
chr3_2 mRNA 61887154 61893377 61887154 ID=Msa0415580-mRNA-1;Parent=Msa0415580;Name=Msa0415580-mRNA-1;_AED=0.02;_eAED=0.02;_QI=345|0.66|0.85|1|1|1|7|513|969
chr3_2 exon 61887154 61887558 61887154 ID=Msa0415580-mRNA-1:exon:13158;Parent=Msa0415580-mRNA-1
chr3_2 exon 61888253 61888339 61888253 ID=Msa0415580-mRNA-1:exon:13159;Parent=Msa0415580-mRNA-1
chr3_2 exon 61888709 61888798 61888709 ID=Msa0415580-mRNA-1:exon:13160;Parent=Msa0415580-mRNA-1
chr3_2 exon 61889211 61889405 61889211 ID=Msa0415580-mRNA-1:exon:13161;Parent=Msa0415580-mRNA-1
chr3_2 exon 61889766 61891778 61889766 ID=Msa0415580-mRNA-1:exon:13162;Parent=Msa0415580-mRNA-1
chr3_2 exon 61891930 61892052 61891930 ID=Msa0415580-mRNA-1:exon:13163;Parent=Msa0415580-mRNA-1
chr3_2 exon 61892523 61893377 61892523 ID=Msa0415580-mRNA-1:exon:13164;Parent=Msa0415580-mRNA-1
chr3_2 five_prime_UTR 61887154 61887498 61887154 ID=Msa0415580-mRNA-1:five_prime_utr;Parent=Msa0415580-mRNA-1
chr3_2 CDS 61887499 61887558 61887499 ID=Msa0415580-mRNA-1:cds;Parent=Msa0415580-mRNA-1
chr3_2 CDS 61888253 61888339 61888253 ID=Msa0415580-mRNA-1:cds;Parent=Msa0415580-mRNA-1
chr3_2 CDS 61888709 61888798 61888709 ID=Msa0415580-mRNA-1:cds;Parent=Msa0415580-mRNA-1
chr3_2 CDS 61889211 61889405 61889211 ID=Msa0415580-mRNA-1:cds;Parent=Msa0415580-mRNA-1
chr3_2 CDS 61889766 61891778 61889766 ID=Msa0415580-mRNA-1:cds;Parent=Msa0415580-mRNA-1
chr3_2 CDS 61891930 61892052 61891930 ID=Msa0415580-mRNA-1:cds;Parent=Msa0415580-mRNA-1
chr3_2 CDS 61892523 61892864 61892523 ID=Msa0415580-mRNA-1:cds;Parent=Msa0415580-mRNA-1
chr3_2 three_prime_UTR 61892865 61893377 61892865 ID=Msa0415580-mRNA-1:three_prime_utr;Parent=Msa0415580-mRNA-1
Gene Sequence

>Msa0415580

ATGACAATGGAAGAAGTTTCTTTGGCTGGAACCCTCCCTTTTGATAGAGCTGTTGAACAGGCAATTGTATCTATAAAGAAAGGTGCATATTTACTCAAGTGTGGTAACAGAGGAAAGCCAAAACTCTGTCCTTTCCGACTTTCTCCGGATGAGAGAAATTTGGTATGGTGCTCAGGGAAGCAGGAAAAGCATTTGCGATTGAGCGGAGTAACCAAAATTGTTCAAGGAGAGGGAAATATATGCAAAGACAAAGCACAAGCTGCTACTTGGTTTGTTGGATTGAAAGCTGTGATTTCTAGGTGCCAGCAACCAAAAGCTTTTAGTAGTTTAAGAAGCTGCAAAGGAGTGCAGAGTTGTGTCAGTAGTCCCTCTGGAATTTTACGCCGAAAGAAAAATCTTGGTCTTCTAGATGACGCCTCTCAATTTACTCAGGTACACAGCGTATGCGCAAGTCCTACTTTGTCACTTTCAGAACGGTGTTTTTCTGACGGCTTGTCATATAAATCTGACTTTTATTCATCGGCATCGTCCCTCTCCAGCATTCATGGCATAACAGACAATTCAGTCCCAAGTTCTCCATATATTAATCCAGATATTCATAGCAATATAAAAACATCTCGTTTCGAAAAAGAGTACAAGAAGGAATTGTCATCAAATAGATCTATCATGCCTCCTGCCTCCGCACTTGTAGGAAACAATGTATTGAAGGATGTCATGATATGGGGTGGTGGAATTGGTTGCCTTGTAGGGATTGTGAATGAAAGGTTTGTTCAAAATAGTATTTATTCTTTAGTTCCAAAGTTACTAGAATCCACCGCAATGTTAGATGTACAAAATGTAGCTTTAGGAGGAAACCATGCTGCAATAGTTACGAAACAAGGGGAAGTTTACTGCTGGGGTCAAGGGAAGTGTGGAAGGTTAGGGCAAAGAATTGATATGGACATTAGCTCCCCGAAAATAGTTGATTCTCTTAGTGATATTCGTGTAAAAAAAGTTGCTTGTGGCGAGTATCATACATGTGCTTTGACGGATTCCGGTGACGTATACACGTGGGGGAAAGACTCTTGTTCAGATTTGGTTGATGAAGGGAGAATTAGAAGTCAGTGGTTAACACATAAACTTTCATTACCTGTCGAAGGTATTAGTATTTCCAGCATTGCTTGTGGCGAATGGCATACTGCAATCGTCTCTAGTTGCGGTCGGTTATTCACGTATGGAGATGGTACATTTGGAGTACTTGGACATGGGAATTATCACAGCTTCTCTAGTCCAAAAGAAGTTGAGTCTCTTAAGGGTCTATGTGTGAGGTCTGTTGCTTGTGGAACATGGCATACGGCAGCAATTATTGAAGTCTCTGCCGAACGCTTTAAGTACAATACTTCGACTGGTAAGCTGTTTACATGGGGTGATGCAGATGAAGGGAGGCTTGGTCATGCTGATAATGTAAACAAGCTTGTACCGACATGTGTTTCACAGCTTGTCGACTACGATTTTGTTCAAGTATCTTGTGGAAGAATGATGACTTTAGCACTTACTAACATGGGAAAAGTTTTTGCAATGGGAAGTGCAAAATATGGACAATTGGGAAATCCACATGTTAAGGACAGAGCGGTTGTGGTTGAAGGAATGCTTAAACAAGAGTATGTTAAAATGATATCTTGTGGTTCATATCACGTTGCTGTTTTGACATCTTCAGGGAGTGTCTACACGTGGGGCAAAGGTGAAAATGGAGAACTAGGGCTAGGCGATACCGAAAACCGATACACACCTTGTTTTGTTGAGGCTTTAAGAGATAGGCAGGTAGATACAATAACATGTGGACCAAGTTTCACAGTTGCAATATGTTTGCACAAACCTATTTCAATTAGTGACCAATCAAGTTGTAATGGTTGTAGGTTACCGTTTGGCTTCACAAGGAAGAAACATAACTGTTATAATTGCGGTCTTTTGTTTTGCCGCAGTTGTAGTAGCAAAAAAGTTTTGAATGCATCTCTAGCCCCGGTTAAGAGCAAGGCCTTTCGTGTTTGTGAATCGTGCTTCAATAAAAAGCAAGGAAGTAGTGAACGTTCATCTATGGACTCATCAAAGTCTCGAAATTGCAACAATCAGCAGATACAAAGGCATCATCAGAACATGATTGGTGATGTCACTGAAGATAGAGGAGAAACAAATGTGACAAATGGTCCTCTGTTGTCTCTTAGTCAAACGTGTTACCGGAAAAACATGCCTAGTGGAAGGAAGGTTTGGAAAATCCAACATGAAAGCCAACGGGATGTAGAAGATAGTTCTTCTACGTTAGGTAGTGTGATACAATGTGGACAAGGACAAGTACCATATTCAGCACAATTTAGAATCAATTGTACAGAAAATTCAGTTGTGCATGAGACAGAAACAACAAAATCCGATAAGTTGCTCATAGAAGAAGTTCAGAGGCTGAGAGCTGAGGCTAAGAGACTTGAAAAGCAATGTGAGCTGAAAAACCAAGAAATACAAGAGTGTCAACAAAAAGTCGAGGAGAGTTGGTCTGTTGCCAAAGAGGAAGCTGCTAAGTGCAAAGCAGCAAAAGAGCTTCACACGATCTCAGGAAAAGATAATCATGGCCTAGAACAAAAGGCTGGGCTACAAGAATTTCTTCCAAATTTGGCACCTATACATACTGATATGAACAGTCCAAGAAATGCCAACACGGACAGTCTATCGAATTCCCCTATAATATTCTCTAGTGCATTAAAATCCAAATTTGGGAGAAGTATTCTTCTTAAAAAGGACAATAATCTCACTAAAGCAGAATCTCAACAAGAGAATGCATTGAAGGTTGAATGGGTTGAACAATATGAGAATGGTGTTTACATAACATTGACAAAGTCGCCGAGTGGAGAAAAAGGCCTTAAGCGTGTGAGATTTAGGTAA
Protein sequence

>Msa0415580

MTMEEVSLAGTLPFDRAVEQAIVSIKKGAYLLKCGNRGKPKLCPFRLSPDERNLVWCSGKQEKHLRLSGVTKIVQGEGNICKDKAQAATWFVGLKAVISRCQQPKAFSSLRSCKGVQSCVSSPSGILRRKKNLGLLDDASQFTQVHSVCASPTLSLSERCFSDGLSYKSDFYSSASSLSSIHGITDNSVPSSPYINPDIHSNIKTSRFEKEYKKELSSNRSIMPPASALVGNNVLKDVMIWGGGIGCLVGIVNERFVQNSIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKKVACGEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKLSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAVVVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAICLHKPISISDQSSCNGCRLPFGFTRKKHNCYNCGLLFCRSCSSKKVLNASLAPVKSKAFRVCESCFNKKQGSSERSSMDSSKSRNCNNQQIQRHHQNMIGDVTEDRGETNVTNGPLLSLSQTCYRKNMPSGRKVWKIQHESQRDVEDSSSTLGSVIQCGQGQVPYSAQFRINCTENSVVHETETTKSDKLLIEEVQRLRAEAKRLEKQCELKNQEIQECQQKVEESWSVAKEEAAKCKAAKELHTISGKDNHGLEQKAGLQEFLPNLAPIHTDMNSPRNANTDSLSNSPIIFSSALKSKFGRSILLKKDNNLTKAESQQENALKVEWVEQYENGVYITLTKSPSGEKGLKRVRFR*