AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0570600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0570600 MtrunA17_Chr4g0052521 97.134 1012 9 1 1 1012 1 992 0.0 1985
Msa0570600 MtrunA17_Chr2g0297051 79.510 1020 166 7 5 1011 41 1030 0.0 1595
Msa0570600 MtrunA17_Chr5g0397621 48.212 923 429 10 93 1009 14 893 0.0 825
Msa0570600 MtrunA17_Chr8g0339181 46.224 993 477 14 19 1001 6 951 0.0 786
Msa0570600 MtrunA17_Chr8g0374321 42.683 656 347 6 45 696 59 689 3.33e-171 517
Msa0570600 MtrunA17_Chr8g0374321 30.675 163 96 4 108 255 30 190 6.23e-14 76.3
Msa0570600 MtrunA17_Chr3g0136331 34.932 730 391 15 302 1001 210 885 7.01e-118 383
Msa0570600 MtrunA17_Chr4g0050431 36.835 695 360 14 340 1010 285 924 2.42e-116 380
Msa0570600 MtrunA17_Chr8g0374331 60.331 242 96 0 768 1009 1 242 1.32e-90 289
Msa0570600 MtrunA17_Chr8g0374391 60.000 235 94 0 775 1009 1 235 2.56e-86 277
Msa0570600 MtrunA17_Chr2g0297871 32.677 508 277 14 460 960 63 512 2.49e-68 242
Msa0570600 MtrunA17_Chr4g0071991 26.858 767 418 25 203 950 17 659 4.54e-64 235
Msa0570600 MtrunA17_Chr8g0374371 51.691 207 79 2 425 630 1 187 8.14e-63 213
Msa0570600 MtrunA17_Chr4g0053441 25.722 727 401 24 296 976 136 769 1.43e-35 145
Msa0570600 MtrunA17_Chr4g0072131 22.362 635 359 22 429 993 135 705 6.84e-21 99.0
Msa0570600 MtrunA17_Chr7g0263361 31.282 195 100 4 808 970 625 817 1.36e-20 98.2
Msa0570600 MtrunA17_Chr3g0138931 21.392 589 361 14 429 968 132 667 2.80e-20 97.1
Msa0570600 MtrunA17_Chr2g0298031 22.591 602 339 21 429 968 137 673 3.86e-20 96.7
Msa0570600 MtrunA17_Chr8g0365021 22.357 577 329 19 439 954 208 726 9.79e-20 95.5
Msa0570600 MtrunA17_Chr1g0148031 21.369 599 349 17 429 968 132 667 3.79e-19 93.6
Msa0570600 MtrunA17_Chr8g0340261 30.500 200 105 5 792 957 174 373 1.10e-18 90.9
Msa0570600 MtrunA17_Chr6g0452721 22.586 580 324 18 439 954 140 658 1.12e-18 92.0
Msa0570600 MtrunA17_Chr4g0059961 22.417 629 350 21 439 993 142 706 1.26e-18 91.7
Msa0570600 MtrunA17_Chr8g0346461 30.601 183 89 4 808 954 618 798 1.92e-18 91.3
Msa0570600 MtrunA17_Chr6g0456201 28.426 197 108 4 794 957 625 821 8.57e-18 89.4
Msa0570600 MtrunA17_Chr1g0147981 21.626 578 332 19 439 954 155 673 9.59e-18 89.0
Msa0570600 MtrunA17_Chr5g0401211 32.402 179 92 3 810 959 649 827 1.06e-17 89.0
Msa0570600 MtrunA17_Chr2g0298871 28.962 183 97 2 808 957 695 877 5.80e-17 86.7
Msa0570600 MtrunA17_Chr4g0020551 31.073 177 94 4 809 957 584 760 6.28e-17 86.3
Msa0570600 MtrunA17_Chr8g0382071 32.022 178 92 5 809 957 648 825 7.23e-17 86.3
Msa0570600 MtrunA17_Chr8g0335291 21.528 576 334 17 439 954 146 663 8.23e-17 85.9
Msa0570600 MtrunA17_Chr7g0260401 28.962 183 96 2 809 957 672 854 2.00e-16 84.7
Msa0570600 MtrunA17_Chr4g0054021 30.168 179 96 3 810 959 572 750 2.23e-16 84.3
Msa0570600 MtrunA17_Chr2g0333721 20.513 585 346 14 429 954 130 654 3.16e-16 84.0
Msa0570600 MtrunA17_Chr2g0304941 21.502 586 339 19 429 954 133 657 4.82e-16 83.2
Msa0570600 MtrunA17_Chr3g0134771 28.283 198 113 4 791 959 632 829 5.44e-16 83.2
Msa0570600 MtrunA17_Chr7g0276551 24.603 378 221 11 630 954 55 421 1.04e-15 82.0
Msa0570600 MtrunA17_Chr8g0355421 32.044 181 92 5 809 959 639 818 1.49e-15 82.0
Msa0570600 MtrunA17_Chr4g0065481 20.761 578 353 20 429 954 133 657 1.65e-15 81.6
Msa0570600 MtrunA17_Chr1g0173111 31.319 182 95 6 806 957 641 822 2.12e-15 81.3
Msa0570600 MtrunA17_Chr3g0134951 27.119 177 98 1 809 954 583 759 8.09e-15 79.3
Msa0570600 MtrunA17_Chr4g0002331 27.322 183 100 3 808 957 708 890 1.67e-14 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0570600 AT5G44790.1 71.470 1027 246 7 1 1009 1 998 0.0 1455
Msa0570600 AT1G63440.1 46.707 987 468 11 35 1009 47 987 0.0 856
Msa0570600 AT1G63440.1 28.070 171 114 1 19 189 109 270 4.38e-12 70.9
Msa0570600 AT5G21930.2 36.017 708 377 16 323 999 213 875 2.19e-117 382
Msa0570600 AT5G21930.1 36.017 708 377 16 323 999 213 875 2.19e-117 382
Msa0570600 AT4G33520.2 35.475 716 379 14 300 999 270 918 6.75e-109 361
Msa0570600 AT4G33520.3 35.475 716 379 14 300 999 270 918 1.29e-108 360
Msa0570600 AT5G21930.3 34.605 708 364 17 323 999 213 852 8.62e-105 347
Msa0570600 AT5G21930.4 35.123 652 343 17 323 943 213 815 5.29e-95 320
Msa0570600 AT4G30110.1 27.332 761 422 21 203 950 13 655 3.45e-68 247
Msa0570600 AT4G30110.2 27.332 761 422 21 203 950 13 655 3.45e-68 247
Msa0570600 AT2G19110.2 26.103 816 454 24 203 1000 23 707 4.73e-59 221
Msa0570600 AT2G19110.3 26.103 816 454 24 203 1000 23 707 4.73e-59 221
Msa0570600 AT2G19110.1 26.103 816 454 24 203 1000 23 707 4.73e-59 221
Msa0570600 AT4G30120.2 29.095 409 225 9 393 800 4 348 6.19e-40 152
Msa0570600 AT4G30120.1 26.298 578 320 16 203 779 19 491 4.67e-39 154
Msa0570600 AT4G37270.1 25.972 643 350 19 356 950 181 745 1.26e-30 130
Msa0570600 AT3G57330.1 25.167 600 346 18 439 957 239 816 9.31e-27 118
Msa0570600 AT3G57330.2 25.167 600 346 18 439 957 184 761 9.57e-27 118
Msa0570600 AT2G41560.2 24.918 610 350 18 433 957 131 717 2.98e-26 117
Msa0570600 AT2G41560.3 24.918 610 350 18 433 957 131 717 2.98e-26 117
Msa0570600 AT2G41560.4 24.918 610 350 18 433 957 131 717 2.98e-26 117
Msa0570600 AT2G41560.1 24.918 610 350 18 433 957 233 819 5.47e-26 116
Msa0570600 AT2G24520.3 23.761 585 343 15 437 968 113 647 3.02e-21 100
Msa0570600 AT2G24520.1 23.761 585 343 15 437 968 113 647 3.02e-21 100
Msa0570600 AT2G24520.2 23.761 585 343 15 437 968 176 710 3.30e-21 100
Msa0570600 AT1G07670.2 30.693 202 102 5 803 970 615 812 1.19e-19 95.5
Msa0570600 AT1G07670.1 30.693 202 102 5 803 970 615 812 1.19e-19 95.5
Msa0570600 AT1G07810.1 30.198 202 103 5 803 970 615 812 1.63e-19 95.1
Msa0570600 AT3G60330.4 22.997 574 333 16 437 954 134 654 4.56e-19 93.6
Msa0570600 AT3G60330.3 22.997 574 333 16 437 954 134 654 4.56e-19 93.6
Msa0570600 AT1G80660.2 21.622 592 335 17 427 954 4 530 6.03e-19 93.2
Msa0570600 AT3G60330.2 22.822 574 334 16 437 954 134 654 9.51e-19 92.8
Msa0570600 AT3G60330.1 22.822 574 334 16 437 954 134 654 9.51e-19 92.8
Msa0570600 AT1G80660.3 21.525 590 334 17 429 954 135 659 1.17e-18 92.4
Msa0570600 AT1G80660.4 21.525 590 334 17 429 954 135 659 1.29e-18 92.0
Msa0570600 AT1G17260.1 21.579 570 341 16 439 954 144 661 1.59e-18 92.0
Msa0570600 AT4G30190.1 21.635 587 337 18 429 954 130 654 1.67e-18 92.0
Msa0570600 AT5G57350.4 22.034 590 331 17 429 954 131 655 2.10e-18 91.7
Msa0570600 AT5G57350.2 22.034 590 331 17 429 954 131 655 2.10e-18 91.7
Msa0570600 AT5G57350.1 22.034 590 331 17 429 954 131 655 2.10e-18 91.7
Msa0570600 AT1G80660.1 21.525 590 334 17 429 954 135 659 2.24e-18 91.3
Msa0570600 AT2G07560.1 21.843 586 336 19 429 954 133 656 4.39e-18 90.5
Msa0570600 AT5G62670.1 21.920 625 358 21 439 993 140 704 5.14e-18 90.1
Msa0570600 AT4G00900.2 29.032 186 98 4 803 954 609 794 5.84e-18 90.1
Msa0570600 AT4G00900.1 29.032 186 98 4 803 954 609 794 5.84e-18 90.1
Msa0570600 AT3G47950.1 21.890 635 346 20 439 993 144 708 1.45e-17 89.0
Msa0570600 AT3G47950.2 21.890 635 346 20 439 993 144 708 1.45e-17 89.0
Msa0570600 AT4G37640.1 30.168 179 96 3 810 959 649 827 6.22e-17 86.7
Msa0570600 AT4G29900.1 27.037 270 141 7 721 957 613 859 6.91e-17 86.7
Msa0570600 AT4G29900.2 27.037 270 141 7 721 957 613 859 6.91e-17 86.7
Msa0570600 AT2G18960.3 21.331 586 340 18 429 954 66 590 1.81e-16 85.1
Msa0570600 AT2G18960.2 21.331 586 340 18 429 954 66 590 1.81e-16 85.1
Msa0570600 AT3G63380.1 29.670 182 95 2 809 957 640 821 2.54e-16 84.7
Msa0570600 AT2G22950.1 30.168 179 96 3 810 959 650 828 4.69e-16 84.0
Msa0570600 AT3G22910.1 30.769 182 93 4 809 957 636 817 5.56e-16 83.6
Msa0570600 AT5G57110.1 28.415 183 98 2 808 957 673 855 9.37e-16 83.2
Msa0570600 AT5G57110.3 28.415 183 98 2 808 957 673 855 9.37e-16 83.2
Msa0570600 AT5G57110.2 28.415 183 98 2 808 957 673 855 9.37e-16 83.2
Msa0570600 AT1G10130.1 27.684 177 97 1 809 954 582 758 1.10e-15 82.8
Msa0570600 AT2G24520.4 23.724 392 233 8 630 968 26 404 1.27e-15 82.0
Msa0570600 AT3G42640.1 21.392 589 336 18 429 954 133 657 2.64e-15 81.6
Msa0570600 AT3G21180.1 26.066 211 123 3 780 957 662 872 5.87e-15 80.5
Msa0570600 AT5G57350.3 23.969 388 212 10 630 954 26 393 2.11e-14 78.2
Msa0570600 AT2G18960.1 26.136 176 100 1 809 954 479 654 9.51e-13 73.2

Find 267 sgRNAs with CRISPR-Local

Find 498 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCCTGCAACAGCTTTAT+TGG 0.127790 4_1:-72805441 Msa0570600:CDS
CTTCTGTATGGCGCTCTTAC+TGG 0.137276 4_1:-72805587 Msa0570600:CDS
TGTATTGTTGGGAAAGTATT+TGG 0.165698 4_1:-72805516 Msa0570600:CDS
TTAATTCATTGGCATCATTT+TGG 0.206497 4_1:+72802973 None:intergenic
GGAGTATTGATTGGAGTCTT+AGG 0.229752 4_1:-72802581 Msa0570600:CDS
TCAGATTCCCCTCTTCTTCA+TGG 0.235078 4_1:-72805837 Msa0570600:intron
ATGGCGCTCTTACTGGATTT+TGG 0.241881 4_1:-72805580 Msa0570600:CDS
GAATGGGAGCTTTGGACATC+TGG 0.249424 4_1:+72804940 None:intergenic
GAGTTCTACTAGCTTCTTAA+TGG 0.251062 4_1:+72805463 None:intergenic
TATAGAGGGCCTCCAGAAAA+TGG 0.253304 4_1:-72802522 Msa0570600:CDS
CAAGTAAATTTACAATAAAT+TGG 0.253790 4_1:+72801394 None:intergenic
CTTGAGTCAGATAATTAATT+TGG 0.256617 4_1:-72804973 Msa0570600:CDS
TTTGGTTGATGCAAGGGTTT+TGG 0.264564 4_1:-72806555 Msa0570600:CDS
GGTTGTAGGCGTTTGTTCTT+TGG 0.273329 4_1:-72806573 Msa0570600:CDS
AACAATGGTGTGTTAATTAA+AGG 0.285608 4_1:-72803502 Msa0570600:CDS
TCATGGTGGCAACAGGTGTT+GGG 0.293408 4_1:-72803528 Msa0570600:CDS
TTGGTGAGTGTCATTCAATT+TGG 0.297350 4_1:-72805725 Msa0570600:CDS
CACCATCTGAGCTCTTTCTA+AGG 0.299600 4_1:+72803471 None:intergenic
TGAAAGGGGTGAGGCAGTTT+AGG 0.302786 4_1:-72806514 Msa0570600:CDS
CCGCTGATGGTATTGTTACC+TGG 0.303580 4_1:-72805139 Msa0570600:CDS
TCAAGGAAAATGCACAAAAT+TGG 0.305293 4_1:+72801460 None:intergenic
TGTGTTGATGAGAGATAATT+TGG 0.310034 4_1:-72801803 Msa0570600:CDS
ATGCACTGCACACCCCTTCC+TGG 0.312304 4_1:+72802909 None:intergenic
GCTTATAACATTTGTATTGT+TGG 0.323122 4_1:-72805528 Msa0570600:CDS
CGCTGATGGTATTGTTACCT+GGG 0.329723 4_1:-72805138 Msa0570600:CDS
GGCCTTTCCTCATGGATGAT+TGG 0.331728 4_1:-72805760 Msa0570600:CDS
TCTTCTTTGCTTATCACGTT+TGG 0.333112 4_1:+72806674 None:intergenic
TTATCTCCTGTAACCATTAC+AGG 0.336285 4_1:+72802491 None:intergenic
CAAACTCATGTGTCCGTTCA+TGG 0.337981 4_1:-72801340 Msa0570600:three_prime_UTR
CATGGATGTCCTTGTTGCTT+TGG 0.338225 4_1:-72805645 Msa0570600:CDS
AATACGAGAGAAAGGAAATA+AGG 0.342922 4_1:+72807339 None:intergenic
AGGTATACTGCTGGGGCTCT+TGG 0.348034 4_1:-72803673 Msa0570600:CDS
CGACGGAACCAACCGGATTC+AGG 0.348664 4_1:-72807181 Msa0570600:CDS
ACTCATCAAAGAAGTGAAAA+TGG 0.349385 4_1:+72803015 None:intergenic
CTTATAACATTTGTATTGTT+GGG 0.352878 4_1:-72805527 Msa0570600:CDS
TGGTGAGTGTCATTCAATTT+GGG 0.354358 4_1:-72805724 Msa0570600:CDS
AGGTTGGCATTCAAGATGTT+AGG 0.358093 4_1:-72801996 Msa0570600:CDS
CATGAGTTTGTTCATGAGAT+AGG 0.359852 4_1:+72801353 None:intergenic
TCTGTTGCCAAGGTGTTTGC+AGG 0.360309 4_1:-72803394 Msa0570600:CDS
TTAGAAGCCATTCTCGCATA+AGG 0.362030 4_1:+72806371 None:intergenic
CAGAGAGTTCGTCTATGTTT+CGG 0.362552 4_1:-72806340 Msa0570600:CDS
GTGGCTTTAGCTACTTCATT+AGG 0.364293 4_1:-72806713 Msa0570600:CDS
CAGATTCCCCTCTTCTTCAT+GGG 0.370257 4_1:-72805836 Msa0570600:CDS
GAGTATTGATTGGAGTCTTA+GGG 0.372614 4_1:-72802580 Msa0570600:CDS
TCAGACTTCTCTGCTATTCC+AGG 0.372749 4_1:-72802927 Msa0570600:CDS
ATCACGCCTGTAATGGTTAC+AGG 0.374551 4_1:-72802497 Msa0570600:CDS
GATGCCAATGAATTAAAATC+AGG 0.379078 4_1:-72802966 Msa0570600:CDS
AAGCTTCCACCATGGGTTGC+TGG 0.384722 4_1:-72801646 Msa0570600:CDS
TCATATACTCGTTATTACTT+TGG 0.386797 4_1:-72805790 Msa0570600:CDS
AATGACAGAGCTACAATTGT+AGG 0.388212 4_1:+72803818 None:intergenic
GCTTTCAGAGCTCTTAGAAA+TGG 0.390325 4_1:-72805677 Msa0570600:CDS
CCGTGGAGAATTTCTTAAAC+TGG 0.391473 4_1:-72803365 Msa0570600:CDS
TCTGTTTGTGCTCTTCTGTA+TGG 0.392307 4_1:-72805599 Msa0570600:CDS
TATAGACGGACAGCGTGTTT+TGG 0.392640 4_1:-72802886 Msa0570600:intron
ATGGATGTCCTTGTTGCTTT+GGG 0.403864 4_1:-72805644 Msa0570600:CDS
TGTTTCAACCGGACTTAAAC+CGG 0.406355 4_1:-72806849 Msa0570600:CDS
AAGTTATGTAAATGAGAGTA+TGG 0.407246 4_1:-72805111 Msa0570600:CDS
CAACAGATATAGAAAACATA+AGG 0.407868 4_1:+72803599 None:intergenic
GGTTTAAGTCCGGTTGAAAC+AGG 0.408286 4_1:+72806851 None:intergenic
ACAACCAATAAAGCTGTTGC+AGG 0.410607 4_1:+72805437 None:intergenic
GTCATGGTGGCAACAGGTGT+TGG 0.416154 4_1:-72803529 Msa0570600:CDS
AGTAATAACGAGTATATGAA+TGG 0.419114 4_1:+72805794 None:intergenic
TAATGGTTACAGGAGATAAC+TGG 0.422229 4_1:-72802487 Msa0570600:CDS
AAGAAGATTATTGTGTTTGG+TGG 0.427442 4_1:+72807469 None:intergenic
GTTCTGATCAGGTTGGTAAC+AGG 0.435074 4_1:-72802706 Msa0570600:intron
TAGAAGCCATTCTCGCATAA+GGG 0.435660 4_1:+72806372 None:intergenic
TTGCCGTACCAGTTGCTGCC+GGG 0.437758 4_1:-72801693 Msa0570600:CDS
TCTATTTCTCTTTCTTCCAC+AGG 0.437986 4_1:+72805218 None:intergenic
AATAAAACCCCGGCAGCAAC+TGG 0.442685 4_1:+72801685 None:intergenic
GACTGTATTGGATCCTACTT+TGG 0.444262 4_1:+72804995 None:intergenic
AGAAGCTTCTGTTGTTATAG+AGG 0.445207 4_1:-72802537 Msa0570600:CDS
ATGCCCATGTGCACTTGGTT+TGG 0.446212 4_1:-72803566 Msa0570600:CDS
GCATTGATCTCCTTCGAAAC+AGG 0.451969 4_1:+72805071 None:intergenic
ATCTCCAACCGGTTTAAGTC+CGG 0.453778 4_1:+72806841 None:intergenic
TGCCAAGGTGTTTGCAGGAA+TGG 0.454986 4_1:-72803389 Msa0570600:CDS
TCAAGTATTGTAGTAAGTCT+TGG 0.455124 4_1:+72801556 None:intergenic
GAGATCAATGCATCTGTCAT+TGG 0.457423 4_1:-72805059 Msa0570600:CDS
AGTGTCATTCAATTTGGGAT+TGG 0.457590 4_1:-72805719 Msa0570600:CDS
GCGAGAATGGCTTCTAAAGA+TGG 0.457955 4_1:-72806365 Msa0570600:CDS
TTACATGAACCTGTTTCAAC+CGG 0.458603 4_1:-72806860 Msa0570600:CDS
CTTGAAGAAAGTGCCAAGAC+TGG 0.462679 4_1:-72802623 Msa0570600:CDS
TGGTACGGCAATAATATTGT+AGG 0.462863 4_1:+72801705 None:intergenic
GTTATTGCAATTGAAGATGC+AGG 0.464292 4_1:-72806647 Msa0570600:CDS
GTCGTTTAAAATTCCTTCAA+CGG 0.465847 4_1:+72806760 None:intergenic
TTTGTTCTTTGGTTGATGCA+AGG 0.469177 4_1:-72806562 Msa0570600:CDS
AAGAATGCAATTGAAGATGC+AGG 0.469462 4_1:-72806899 Msa0570600:CDS
GCAGATGTTGGTATGGCAAT+TGG 0.470750 4_1:-72801862 Msa0570600:CDS
ATGGGTTGCTGGTGCATGCA+TGG 0.471253 4_1:-72801635 Msa0570600:CDS
GATTGGATTATTTGAGATGG+AGG 0.472917 4_1:+72807534 None:intergenic
GCCGGAGTCATCGCCGGCGC+CGG 0.474208 4_1:+72807257 None:intergenic
TTGTTCTTTGGTTGATGCAA+GGG 0.474906 4_1:-72806561 Msa0570600:CDS
TAGAAGCCCTTATGCGAGAA+TGG 0.476362 4_1:-72806378 Msa0570600:CDS
CACAATGTTATTGACGCCTC+AGG 0.477200 4_1:-72801272 Msa0570600:three_prime_UTR
AAGTATTGTGGCCGTGCTCT+TGG 0.485752 4_1:-72804898 Msa0570600:CDS
AGTTCTTAGTTCTAGATCGT+TGG 0.488758 4_1:-72806447 Msa0570600:CDS
GAGATGTGGGCCTTTCCTCA+TGG 0.488956 4_1:-72805768 Msa0570600:CDS
CGCTACAAGGATCCCAGTCT+TGG 0.489491 4_1:+72802610 None:intergenic
TCGTTATTACTTTGGAGATG+TGG 0.489608 4_1:-72805782 Msa0570600:CDS
GTATGCTTAGTGGTATGAAA+GGG 0.490896 4_1:-72806529 Msa0570600:CDS
ATTGCATGCCCATGTGCACT+TGG 0.493098 4_1:-72803571 Msa0570600:CDS
CGGATTCAGGTCAGAATCAC+CGG 0.493554 4_1:-72807168 Msa0570600:CDS
AATGGGAATCACGCCTGTAA+TGG 0.494340 4_1:-72802504 Msa0570600:CDS
GGAGTTAGAGCAAGCGGCGC+AGG 0.494862 4_1:+72807140 None:intergenic
AGTATGCTTAGTGGTATGAA+AGG 0.501872 4_1:-72806530 Msa0570600:CDS
ATTGCCGTACCAGTTGCTGC+CGG 0.503085 4_1:-72801694 Msa0570600:CDS
TCAACGACGACGGAACCAAC+CGG 0.504841 4_1:-72807188 Msa0570600:CDS
ACAGATTGGATTATTTGAGA+TGG 0.506312 4_1:+72807531 None:intergenic
TAAAACAATCTCATCTTGAC+TGG 0.506827 4_1:+72806598 None:intergenic
CGTTATTACTTTGGAGATGT+GGG 0.506990 4_1:-72805781 Msa0570600:CDS
TGCCGTACCAGTTGCTGCCG+GGG 0.507352 4_1:-72801692 Msa0570600:CDS
GCATTAGCTGCTGCAGATGT+TGG 0.507757 4_1:-72801874 Msa0570600:CDS
AATGGGAGCTTTGGACATCT+GGG 0.508519 4_1:+72804941 None:intergenic
GTCGCCAAACCAAGTGCACA+TGG 0.508959 4_1:+72803562 None:intergenic
CGGTGATTCTGACCTGAATC+CGG 0.509572 4_1:+72807169 None:intergenic
ATAGAGGGCCTCCAGAAAAT+GGG 0.509737 4_1:-72802521 Msa0570600:CDS
GGCAATAATATTGTAGGCCA+TGG 0.510022 4_1:+72801711 None:intergenic
TACGTTATATTTGATAAGAC+AGG 0.512329 4_1:-72803445 Msa0570600:CDS
GGAGTCATCGCCGGCGCCGG+TGG 0.512775 4_1:+72807260 None:intergenic
GTTGGTATGGCAATTGGAGC+TGG 0.513083 4_1:-72801856 Msa0570600:CDS
GGTTGGCATTCAAGATGTTA+GGG 0.513253 4_1:-72801995 Msa0570600:CDS
CATTCAAGATGTTAGGGCAG+AGG 0.513441 4_1:-72801989 Msa0570600:CDS
GAAATATATACAAACCTCCT+TGG 0.514370 4_1:+72802445 None:intergenic
CATAAGTATTTCTACTGAAG+TGG 0.514915 4_1:-72802663 Msa0570600:CDS
ACTGCTGTCATGGTGGCAAC+AGG 0.515401 4_1:-72803535 Msa0570600:CDS
GAAGGTGATACGATACAGAT+TGG 0.516326 4_1:+72807517 None:intergenic
TATCTGACTCAAGACTGTAT+TGG 0.517545 4_1:+72804983 None:intergenic
TACATTTGAACAATGAGTGC+AGG 0.518273 4_1:+72801427 None:intergenic
GATGAGTCCTCTCTTACCAA+TGG 0.518678 4_1:-72802999 Msa0570600:CDS
CACATTAAAGCTACCAAAGT+AGG 0.519785 4_1:-72805008 Msa0570600:CDS
AGGGCAGAGGTTATGCCTGC+AGG 0.519939 4_1:-72801976 Msa0570600:CDS
AGAGGTTATGCCTGCAGGAA+AGG 0.525897 4_1:-72801971 Msa0570600:CDS
ATACTCCATTGCACGCTACA+AGG 0.526385 4_1:+72802597 None:intergenic
GGCGACACCAACTGCTGTCA+TGG 0.527208 4_1:-72803545 Msa0570600:CDS
TGCTGTTTCACCATCTCCAT+CGG 0.527914 4_1:-72807439 Msa0570600:five_prime_UTR
TTTGTTCATGAGATAGGTAG+AGG 0.528166 4_1:+72801359 None:intergenic
ACCACATCAGCCTTTCCTGC+AGG 0.530022 4_1:+72801961 None:intergenic
CATGGTGGCAACAGGTGTTG+GGG 0.530178 4_1:-72803527 Msa0570600:CDS
TAAGACAGGAACTCTAACTC+AGG 0.530527 4_1:-72803431 Msa0570600:CDS
GTAATAACGAGTATATGAAT+GGG 0.531622 4_1:+72805795 None:intergenic
TAAGGAAGATGTATTTAAAG+AGG 0.531880 4_1:+72807357 None:intergenic
TGATTGGTTGAAGTGGGCAT+TGG 0.532100 4_1:-72805744 Msa0570600:CDS
ATCCTTAGAAAGAGCTCAGA+TGG 0.532974 4_1:-72803473 Msa0570600:CDS
CTTTGGTAGCTTTAATGTGA+AGG 0.535532 4_1:+72805012 None:intergenic
GGCATCAGATGTCTTCCCCT+TGG 0.535998 4_1:+72805484 None:intergenic
GCAAGCGGCGCAGGTCATGC+CGG 0.536269 4_1:+72807149 None:intergenic
GATAATTAATTTGGTCGAGA+CGG 0.537531 4_1:-72804964 Msa0570600:CDS
AAAGAGTAGTAACTTACAAA+GGG 0.538032 4_1:-72801509 Msa0570600:three_prime_UTR
AACAGATATAGAAAACATAA+GGG 0.538427 4_1:+72803600 None:intergenic
GGACATGAGAGCGGCTTCGA+CGG 0.539531 4_1:+72807119 None:intergenic
AGATTCCCCTCTTCTTCATG+GGG 0.539845 4_1:-72805835 Msa0570600:CDS
ACCGGCGCCGGCGATGACTC+CGG 0.540319 4_1:-72807258 Msa0570600:CDS
TAAAGAGTAGTAACTTACAA+AGG 0.541634 4_1:-72801510 Msa0570600:three_prime_UTR
GCCGCTCTCATGTCCGTCGA+CGG 0.541888 4_1:-72807111 Msa0570600:CDS
GAGTATATGAATGGGATATG+AGG 0.542597 4_1:+72805803 None:intergenic
ATTGGATTATTTGAGATGGA+GGG 0.543204 4_1:+72807535 None:intergenic
GAAGCTTCTGTTGTTATAGA+GGG 0.546172 4_1:-72802536 Msa0570600:CDS
TACAAAGGGTGCAAATGAGT+TGG 0.547463 4_1:-72801495 Msa0570600:three_prime_UTR
GGGAATCAAGCTTCCACCAT+GGG 0.547653 4_1:-72801653 Msa0570600:CDS
ATGAGGTGAATACGAGAGAA+AGG 0.547814 4_1:+72807331 None:intergenic
AGGAAGCTGCTGGTGGAAAG+TGG 0.550070 4_1:-72802686 Msa0570600:CDS
AACTGCTCGAGCTGTTGCCA+AGG 0.550725 4_1:-72802462 Msa0570600:CDS
ATTTACATAACTTGAGCCCC+AGG 0.551493 4_1:+72805121 None:intergenic
ATTGAATTATGTATTTGCCA+TGG 0.551910 4_1:-72801728 Msa0570600:CDS
AAGGACACCATGCAAATTGA+TGG 0.553347 4_1:+72805031 None:intergenic
GTGGAAGTTAGTTGAATACT+CGG 0.553506 4_1:+72807279 None:intergenic
AGATGGTAGTATAGTTGCAA+TGG 0.554431 4_1:-72801923 Msa0570600:CDS
AGCCACTGTCTCTGTTGCCA+AGG 0.554586 4_1:-72803404 Msa0570600:CDS
TTGGGATCCATTGGTAAGAG+AGG 0.555619 4_1:+72802992 None:intergenic
CAACTAACTTCCACCGGCGC+CGG 0.556089 4_1:-72807270 Msa0570600:CDS
ATTGTGGCCGTGCTCTTGGA+TGG 0.556931 4_1:-72804894 Msa0570600:CDS
TTCTCTGCTATTCCAGGAAG+GGG 0.557195 4_1:-72802921 Msa0570600:CDS
AGTGTATCTCATATGTGCGT+TGG 0.557667 4_1:-72801298 Msa0570600:three_prime_UTR
TGGTAGTATAGTTGCAATGG+TGG 0.558345 4_1:-72801920 Msa0570600:CDS
GGCTAGCAGTGAACACCCGC+TGG 0.559219 4_1:-72803063 Msa0570600:CDS
GCGTGCAATGGAGTATTGAT+TGG 0.559641 4_1:-72802590 Msa0570600:CDS
ACCACCGTACTATCTCCAAC+CGG 0.560837 4_1:+72806830 None:intergenic
GCGTGTGTGAATTCCGTTGA+AGG 0.561783 4_1:-72806773 Msa0570600:CDS
ACATCTGCAGCAGCTAATGC+AGG 0.562486 4_1:+72801877 None:intergenic
TAAACTGGTGGCTTCTGCTG+AGG 0.563783 4_1:-72803350 Msa0570600:intron
GGGATCCTTGTAGCGTGCAA+TGG 0.564317 4_1:-72802602 Msa0570600:CDS
AATGGTGTGTTAATTAAAGG+AGG 0.566500 4_1:-72803499 Msa0570600:CDS
GCGAACATCTTCGAGATCGC+CGG 0.566672 4_1:+72807239 None:intergenic
GGTTGGTAACAGGAAGCTGC+TGG 0.567598 4_1:-72802696 Msa0570600:CDS
TCAACCGGACTTAAACCGGT+TGG 0.569451 4_1:-72806845 Msa0570600:CDS
CTTCTCTGCTATTCCAGGAA+GGG 0.570582 4_1:-72802922 Msa0570600:CDS
GTATTTGGAATGTCTTGCCA+AGG 0.571096 4_1:-72805501 Msa0570600:CDS
TCATGGATGATTGGTTGAAG+TGG 0.573589 4_1:-72805751 Msa0570600:CDS
GTGCAGGCGAGAGGAGCTCA+AGG 0.573659 4_1:+72801443 None:intergenic
TTGAAGAAAGTGCCAAGACT+GGG 0.574392 4_1:-72802622 Msa0570600:CDS
GTCACTAGGTTGAATAAGCA+AGG 0.575805 4_1:+72805193 None:intergenic
CATTATTGACACTATTGTGT+TGG 0.576900 4_1:-72803799 Msa0570600:intron
TTGGAGCATACCCAGATGAA+TGG 0.578362 4_1:-72803654 Msa0570600:CDS
ACTTCTCTGCTATTCCAGGA+AGG 0.579821 4_1:-72802923 Msa0570600:CDS
CAGGTAACAATACCATCAGC+GGG 0.580491 4_1:+72805140 None:intergenic
GGTACAAAGATTCCCGCTGA+TGG 0.580974 4_1:-72805152 Msa0570600:CDS
GATCTAGAACTAAGAACTTG+AGG 0.581982 4_1:+72806452 None:intergenic
ATGCCAATGAATTAAAATCA+GGG 0.582049 4_1:-72802965 Msa0570600:CDS
TAGAAATGGTTCAACAAACA+TGG 0.582828 4_1:-72805663 Msa0570600:CDS
GATTCTGACCTGAATCCGGT+TGG 0.584660 4_1:+72807173 None:intergenic
AGCTGCTGCAGATGTTGGTA+TGG 0.585708 4_1:-72801869 Msa0570600:CDS
TGCTCGAGCTGTTGCCAAGG+AGG 0.585770 4_1:-72802459 Msa0570600:intron
TCAGCGGGAATCTTTGTACC+AGG 0.585900 4_1:+72805155 None:intergenic
GTCCATTCCTGCAAACACCT+TGG 0.586968 4_1:+72803387 None:intergenic
GGAGGTACCATCAATTTGCA+TGG 0.587008 4_1:-72805038 Msa0570600:CDS
GAGATCGCCGGAGTCATCGC+CGG 0.588833 4_1:+72807251 None:intergenic
TGGAGAATTTCTTAAACTGG+TGG 0.589048 4_1:-72803362 Msa0570600:CDS
AGTATTCAACTAACTTCCAC+CGG 0.589297 4_1:-72807276 Msa0570600:CDS
TGCTGATTATGTAAGTATTG+TGG 0.591215 4_1:-72804910 Msa0570600:CDS
AACCCCGGCAGCAACTGGTA+CGG 0.593335 4_1:+72801690 None:intergenic
TTATTGGTTGTTAAAGACAA+AGG 0.593463 4_1:-72805425 Msa0570600:intron
TTTCAATAGAAACCTTGTCA+AGG 0.594793 4_1:-72807040 Msa0570600:intron
TATTTGGAATGTCTTGCCAA+GGG 0.598379 4_1:-72805500 Msa0570600:CDS
GCCTGCAGGAAAGGCTGATG+TGG 0.598442 4_1:-72801962 Msa0570600:CDS
TTCGACGGAGTTAGAGCAAG+CGG 0.598928 4_1:+72807134 None:intergenic
TGCACAAAATTGGAATCACA+AGG 0.599250 4_1:+72801470 None:intergenic
AACCAATCATCCATGAGGAA+AGG 0.599373 4_1:+72805758 None:intergenic
ATGCATGCACCAGCAACCCA+TGG 0.601867 4_1:+72801637 None:intergenic
TATGCTTAGTGGTATGAAAG+GGG 0.608048 4_1:-72806528 Msa0570600:CDS
GACACATTAAAAGTTCTGCC+TGG 0.608452 4_1:-72805173 Msa0570600:CDS
ATAGTTGCAATGGTGGGTGA+CGG 0.612936 4_1:-72801913 Msa0570600:CDS
AGTATTGATTGGAGTCTTAG+GGG 0.613540 4_1:-72802579 Msa0570600:CDS
TTGGTATGGCAATTGGAGCT+GGG 0.615027 4_1:-72801855 Msa0570600:CDS
TAAACCGGTTGGAGATAGTA+CGG 0.617219 4_1:-72806834 Msa0570600:CDS
CGAGTCTATACCTGTTTCGA+AGG 0.617498 4_1:-72805081 Msa0570600:CDS
ATCAATGCATCTGTCATTGG+AGG 0.619885 4_1:-72805056 Msa0570600:CDS
CTGTAGTTCCCAAAGCAACA+AGG 0.623003 4_1:+72805636 None:intergenic
ACAGGTGTTGGGGCTAACAA+TGG 0.625686 4_1:-72803517 Msa0570600:CDS
GGAAGCTTGATTCCCAGTGA+AGG 0.626009 4_1:+72801661 None:intergenic
CATGGATGATTGGTTGAAGT+GGG 0.626764 4_1:-72805750 Msa0570600:CDS
TGGTAACAGGAAGCTGCTGG+TGG 0.634413 4_1:-72802693 Msa0570600:CDS
GAACAATGAGTGCAGGCGAG+AGG 0.636024 4_1:+72801434 None:intergenic
GGCTTGAATTACACCGTCGA+CGG 0.636046 4_1:+72807098 None:intergenic
CCAGGTAACAATACCATCAG+CGG 0.638825 4_1:+72805139 None:intergenic
GTGGTTGGACAGTTCACGAT+CGG 0.640067 4_1:-72806812 Msa0570600:CDS
ACTCACACTAAGAAGCAAGC+TGG 0.641334 4_1:+72806307 None:intergenic
CACCTTGGCAACAGAGACAG+TGG 0.642911 4_1:+72803402 None:intergenic
ATTAGAGTTAAACCTTGACA+AGG 0.645378 4_1:+72807028 None:intergenic
AAGACAGGAACTCTAACTCA+GGG 0.647613 4_1:-72803430 Msa0570600:CDS
GATTCCCCTCTTCTTCATGG+GGG 0.647766 4_1:-72805834 Msa0570600:CDS
GTTGGAGATAGTACGGTGGT+TGG 0.649965 4_1:-72806827 Msa0570600:CDS
GTTTCTATTGAAAACGACGT+CGG 0.653328 4_1:+72807050 None:intergenic
CATGCACCAGCAACCCATGG+TGG 0.653724 4_1:+72801640 None:intergenic
GGTGTGCAGTGCATTATAGA+CGG 0.653890 4_1:-72802900 Msa0570600:CDS
TTGTTCATGAGATAGGTAGA+GGG 0.654337 4_1:+72801360 None:intergenic
GTAAATGAGAGTATGGTGAC+TGG 0.657765 4_1:-72805104 Msa0570600:CDS
TGGGAATCAAGCTTCCACCA+TGG 0.659512 4_1:-72801654 Msa0570600:CDS
ATTTGGAATGTCTTGCCAAG+GGG 0.662416 4_1:-72805499 Msa0570600:CDS
CCAGTTTAAGAAATTCTCCA+CGG 0.666614 4_1:+72803365 None:intergenic
ACATTAAGCTCACTCAACAA+AGG 0.672540 4_1:+72806485 None:intergenic
TTAGTGGTATGAAAGGGGTG+AGG 0.677514 4_1:-72806523 Msa0570600:CDS
GTTGGACAGTTCACGATCGG+CGG 0.678514 4_1:-72806809 Msa0570600:CDS
GGTAGTATAGTTGCAATGGT+GGG 0.680572 4_1:-72801919 Msa0570600:CDS
TCGCCAAACCAAGTGCACAT+GGG 0.686508 4_1:+72803563 None:intergenic
GTGTTTGCAGGAATGGACCG+TGG 0.689642 4_1:-72803382 Msa0570600:CDS
GATCGGCGGTATGACATGTG+CGG 0.691196 4_1:-72806795 Msa0570600:CDS
AACGTGGAAGATAGAACCTG+AGG 0.692439 4_1:+72801256 None:intergenic
GACACCAACTGCTGTCATGG+TGG 0.692490 4_1:-72803542 Msa0570600:CDS
ACCGTCGACGGACATGAGAG+CGG 0.693610 4_1:+72807110 None:intergenic
GTTGCCACCATGACAGCAGT+TGG 0.695583 4_1:+72803538 None:intergenic
CAGTGAAGGAAATAAAACCC+CGG 0.701022 4_1:+72801675 None:intergenic
GCTGATGGTATTGTTACCTG+GGG 0.702676 4_1:-72805137 Msa0570600:CDS
TGGAATAGCAGAGAAGTCTG+AGG 0.707769 4_1:+72802929 None:intergenic
GCACAAAATTGGAATCACAA+GGG 0.719506 4_1:+72801471 None:intergenic
CCAATGAATTAAAATCAGGG+TGG 0.720072 4_1:-72802962 Msa0570600:CDS
GAGAGAGAGAAAATGCGATG+AGG 0.723306 4_1:+72807314 None:intergenic
ACTTCAACCAATCATCCATG+AGG 0.728611 4_1:+72805753 None:intergenic
ACCGGTTGGAGATAGTACGG+TGG 0.750992 4_1:-72806831 Msa0570600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATATTTTGTTTAAATTTT+AGG - chr4_1:72805110-72805129 Msa0570600:CDS 10.0%
!!! TTTCTATAATATTTTCTTTT+TGG - chr4_1:72806377-72806396 Msa0570600:CDS 10.0%
!! GAAAAGAAAAGAAAAAATAT+TGG + chr4_1:72803554-72803573 None:intergenic 15.0%
!! TTTATGAATAATTCTATGTA+AGG + chr4_1:72804760-72804779 None:intergenic 15.0%
!!! ATTGTTATTATCTTTAATGA+AGG - chr4_1:72805966-72805985 Msa0570600:intron 15.0%
!!! TATAATATTTTCTTTTTGGT+TGG - chr4_1:72806381-72806400 Msa0570600:CDS 15.0%
!! CAAGTAAATTTACAATAAAT+TGG + chr4_1:72807412-72807431 None:intergenic 15.0%
!! AAAAAGAAGATTATTGTGTT+TGG + chr4_1:72801340-72801359 None:intergenic 20.0%
!! AAATATGGCTATAGATTAAA+GGG + chr4_1:72802524-72802543 None:intergenic 20.0%
!! CAAAATAACAAGAACAAATA+TGG + chr4_1:72802539-72802558 None:intergenic 20.0%
!!! CATATTTGTTCTTGTTATTT+TGG - chr4_1:72802537-72802556 Msa0570600:CDS 20.0%
!! CAAGAAACTAAACAAAATAA+GGG + chr4_1:72802898-72802917 None:intergenic 20.0%
!! ACAAGAAACTAAACAAAATA+AGG + chr4_1:72802899-72802918 None:intergenic 20.0%
!! CTTATAACATTTGTATTGTT+GGG - chr4_1:72803276-72803295 Msa0570600:intron 20.0%
!!! TTTTTCTTTTCTTTTCTAGA+TGG - chr4_1:72803558-72803577 Msa0570600:CDS 20.0%
!! TACACTATCTATTGAAATTT+GGG + chr4_1:72804316-72804335 None:intergenic 20.0%
!! TTACACTATCTATTGAAATT+TGG + chr4_1:72804317-72804336 None:intergenic 20.0%
!!! ATTCAACAGAGTTTTATATT+AGG + chr4_1:72804425-72804444 None:intergenic 20.0%
!!! TTATTGATTCCAATTATTTC+AGG - chr4_1:72804789-72804808 Msa0570600:intron 20.0%
!! ATAAACATGAGTTTGAATTA+TGG + chr4_1:72804827-72804846 None:intergenic 20.0%
!! AACAGATATAGAAAACATAA+GGG + chr4_1:72805206-72805225 None:intergenic 20.0%
!! TAAAATGCCAAAACATTATT+AGG + chr4_1:72805629-72805648 None:intergenic 20.0%
!!! ATGACAGTTATAACAAATTT+TGG - chr4_1:72806733-72806752 Msa0570600:CDS 20.0%
!!! TGACAGTTATAACAAATTTT+GGG - chr4_1:72806734-72806753 Msa0570600:CDS 20.0%
!!! AATTTTTTAACGAAAGTGGA+AGG + chr4_1:72801307-72801326 None:intergenic 25.0%
! TAAGGAAGATGTATTTAAAG+AGG + chr4_1:72801449-72801468 None:intergenic 25.0%
!!! GTTTGTTTAGTTACTGATTT+TGG - chr4_1:72801843-72801862 Msa0570600:CDS 25.0%
! TTCTTAATATCTTCATCCTA+GGG + chr4_1:72801889-72801908 None:intergenic 25.0%
! ATTCTTAATATCTTCATCCT+AGG + chr4_1:72801890-72801909 None:intergenic 25.0%
! CAAATATGGCTATAGATTAA+AGG + chr4_1:72802525-72802544 None:intergenic 25.0%
! CATACAGAAATTTCATCTAA+CGG - chr4_1:72802773-72802792 Msa0570600:intron 25.0%
! GTAATAACGAGTATATGAAT+GGG + chr4_1:72803011-72803030 None:intergenic 25.0%
! AGTAATAACGAGTATATGAA+TGG + chr4_1:72803012-72803031 None:intergenic 25.0%
! TCATATACTCGTTATTACTT+TGG - chr4_1:72803013-72803032 Msa0570600:CDS 25.0%
! GCTTATAACATTTGTATTGT+TGG - chr4_1:72803275-72803294 Msa0570600:intron 25.0%
!! TTATTGGTTGTTAAAGACAA+AGG - chr4_1:72803378-72803397 Msa0570600:CDS 25.0%
!!! GCTTTGTTTTCTTAAGAAAA+TGG - chr4_1:72803424-72803443 Msa0570600:CDS 25.0%
!! TTGTTTTCTTAAGAAAATGG+AGG - chr4_1:72803427-72803446 Msa0570600:CDS 25.0%
!! TGTTTTCTTAAGAAAATGGA+GGG - chr4_1:72803428-72803447 Msa0570600:CDS 25.0%
! AACCTAAATATAAGACAATC+AGG + chr4_1:72803468-72803487 None:intergenic 25.0%
!!! ATTTAGGTTGAAATTAGTGA+TGG - chr4_1:72803479-72803498 Msa0570600:CDS 25.0%
! AAGTTATGTAAATGAGAGTA+TGG - chr4_1:72803692-72803711 Msa0570600:intron 25.0%
! CTTGAGTCAGATAATTAATT+TGG - chr4_1:72803830-72803849 Msa0570600:CDS 25.0%
!! TAATCAGCAAACTTTTGAAT+GGG + chr4_1:72803882-72803901 None:intergenic 25.0%
!! ATAATCAGCAAACTTTTGAA+TGG + chr4_1:72803883-72803902 None:intergenic 25.0%
! TGATACCATGTTAAAATTTG+GGG + chr4_1:72804109-72804128 None:intergenic 25.0%
! CTGATACCATGTTAAAATTT+GGG + chr4_1:72804110-72804129 None:intergenic 25.0%
! TCTGATACCATGTTAAAATT+TGG + chr4_1:72804111-72804130 None:intergenic 25.0%
! ACACTATCTATTGAAATTTG+GGG + chr4_1:72804315-72804334 None:intergenic 25.0%
! ACTAAGTAAAAATGCATACA+TGG + chr4_1:72804527-72804546 None:intergenic 25.0%
!! GTATGCATTTTTACTTAGTT+TGG - chr4_1:72804528-72804547 Msa0570600:intron 25.0%
! AAAATATTGTTCTGACTCTA+CGG + chr4_1:72804708-72804727 None:intergenic 25.0%
!!! ATTCCAATTATTTCAGGTTT+AGG - chr4_1:72804795-72804814 Msa0570600:intron 25.0%
! AATGTATCTTAAGTCATTTG+TGG + chr4_1:72804914-72804933 None:intergenic 25.0%
! TAAGATACATTAACTAACTC+AGG - chr4_1:72804923-72804942 Msa0570600:CDS 25.0%
! AAAATATGTACACAGAAGTA+AGG + chr4_1:72805099-72805118 None:intergenic 25.0%
!!! TTAAATTTTAGGTATACTGC+TGG - chr4_1:72805121-72805140 Msa0570600:CDS 25.0%
!!! TAAATTTTAGGTATACTGCT+GGG - chr4_1:72805122-72805141 Msa0570600:CDS 25.0%
! CAACAGATATAGAAAACATA+AGG + chr4_1:72805207-72805226 None:intergenic 25.0%
!! TATGTTTTCTATATCTGTTG+TGG - chr4_1:72805207-72805226 Msa0570600:CDS 25.0%
! AACAATGGTGTGTTAATTAA+AGG - chr4_1:72805301-72805320 Msa0570600:intron 25.0%
! TACGTTATATTTGATAAGAC+AGG - chr4_1:72805358-72805377 Msa0570600:intron 25.0%
!! TGTTTTATGTCTTTTATAGC+TGG + chr4_1:72805558-72805577 None:intergenic 25.0%
!! CAACTTTCCTAATAATGTTT+TGG - chr4_1:72805619-72805638 Msa0570600:CDS 25.0%
!! TAATTCATTGGCATCATTTT+GGG + chr4_1:72805832-72805851 None:intergenic 25.0%
!! TTAATTCATTGGCATCATTT+TGG + chr4_1:72805833-72805852 None:intergenic 25.0%
! ATGCCAATGAATTAAAATCA+GGG - chr4_1:72805838-72805857 Msa0570600:intron 25.0%
!!! CGTGTTTTGGTAATTTTTTT+TGG - chr4_1:72805930-72805949 Msa0570600:intron 25.0%
!! TAATGAAGGAATATGTTTTG+TGG - chr4_1:72805980-72805999 Msa0570600:intron 25.0%
!!! CTTTTCTTAAGAGTTGATAA+AGG - chr4_1:72806032-72806051 Msa0570600:intron 25.0%
! AGTATGATTAAAACCATAAC+TGG - chr4_1:72806564-72806583 Msa0570600:CDS 25.0%
!! TTGATTTTCTTGTGCATAAA+AGG - chr4_1:72806607-72806626 Msa0570600:CDS 25.0%
!!! AAGAAAATGTGTTTTTTGAC+AGG - chr4_1:72806787-72806806 Msa0570600:CDS 25.0%
! ATTGAATTATGTATTTGCCA+TGG - chr4_1:72807075-72807094 Msa0570600:CDS 25.0%
! TAAAGAGTAGTAACTTACAA+AGG - chr4_1:72807293-72807312 Msa0570600:exon 25.0%
! AAAGAGTAGTAACTTACAAA+GGG - chr4_1:72807294-72807313 Msa0570600:exon 25.0%
! ATTGGATTATTTGAGATGGA+GGG + chr4_1:72801271-72801290 None:intergenic 30.0%
ACAGATTGGATTATTTGAGA+TGG + chr4_1:72801275-72801294 None:intergenic 30.0%
!!! CAGCAATTTTTTAACGAAAG+TGG + chr4_1:72801311-72801330 None:intergenic 30.0%
AAGAAGATTATTGTGTTTGG+TGG + chr4_1:72801337-72801356 None:intergenic 30.0%
! AAGAAAAAAGAGTTTTCCGA+TGG + chr4_1:72801383-72801402 None:intergenic 30.0%
ATGGAAAATGGAGAGAAAAA+AGG + chr4_1:72801411-72801430 None:intergenic 30.0%
AATACGAGAGAAAGGAAATA+AGG + chr4_1:72801467-72801486 None:intergenic 30.0%
! TTTTATCGTAGGAATCTAGT+AGG + chr4_1:72801589-72801608 None:intergenic 30.0%
!!! TTTGTTTTGAAGTAAAGCGA+CGG + chr4_1:72801732-72801751 None:intergenic 30.0%
TTTCAATAGAAACCTTGTCA+AGG - chr4_1:72801763-72801782 Msa0570600:CDS 30.0%
ATTAGAGTTAAACCTTGACA+AGG + chr4_1:72801778-72801797 None:intergenic 30.0%
TGTTGAATTGTTTAAACCCT+AGG - chr4_1:72801870-72801889 Msa0570600:CDS 30.0%
! GTCGTTTAAAATTCCTTCAA+CGG + chr4_1:72802046-72802065 None:intergenic 30.0%
TAAAACAATCTCATCTTGAC+TGG + chr4_1:72802208-72802227 None:intergenic 30.0%
! AGTCAAGATGAGATTGTTTT+AGG - chr4_1:72802207-72802226 Msa0570600:intron 30.0%
!! GTCAAGATGAGATTGTTTTA+GGG - chr4_1:72802208-72802227 Msa0570600:intron 30.0%
!!! TCAAGATGAGATTGTTTTAG+GGG - chr4_1:72802209-72802228 Msa0570600:intron 30.0%
! TGCTTTAAACTCAAACCTTA+GGG - chr4_1:72802657-72802676 Msa0570600:CDS 30.0%
TTATGGAGCATAAAATTCAG+TGG + chr4_1:72802732-72802751 None:intergenic 30.0%
! ACTGAATTTTATGCTCCATA+AGG - chr4_1:72802731-72802750 Msa0570600:intron 30.0%
! CTGAATTTTATGCTCCATAA+GGG - chr4_1:72802732-72802751 Msa0570600:intron 30.0%
CGTTAGATGAAATTTCTGTA+TGG + chr4_1:72802775-72802794 None:intergenic 30.0%
CTATAAAAAAAACGATGACG+CGG + chr4_1:72802807-72802826 None:intergenic 30.0%
TAGAAATGGTTCAACAAACA+TGG - chr4_1:72803140-72803159 Msa0570600:intron 30.0%
!! TGTATTGTTGGGAAAGTATT+TGG - chr4_1:72803287-72803306 Msa0570600:intron 30.0%
! GTTTTCTTAAGAAAATGGAG+GGG - chr4_1:72803429-72803448 Msa0570600:CDS 30.0%
GTCCTGATTGTCTTATATTT+AGG - chr4_1:72803463-72803482 Msa0570600:CDS 30.0%
!! AGAACTTTTAATGTGTCACT+AGG + chr4_1:72803627-72803646 None:intergenic 30.0%
! GATAATTAATTTGGTCGAGA+CGG - chr4_1:72803839-72803858 Msa0570600:CDS 30.0%
! TGCTGATTATGTAAGTATTG+TGG - chr4_1:72803893-72803912 Msa0570600:intron 30.0%
TTTCCCAATACTATCAATGT+AGG + chr4_1:72803987-72804006 None:intergenic 30.0%
! TCTTGAGAGAGTATATAAAG+AGG - chr4_1:72804244-72804263 Msa0570600:intron 30.0%
CTAACTCATCCTTAAAAAAC+CGG + chr4_1:72804291-72804310 None:intergenic 30.0%
TTGGCTATATTATGCAATGT+AGG + chr4_1:72804357-72804376 None:intergenic 30.0%
!!! CTTCCATTTTTAGTTATTGC+TGG - chr4_1:72804497-72804516 Msa0570600:intron 30.0%
ACACCAGCAATAACTAAAAA+TGG + chr4_1:72804503-72804522 None:intergenic 30.0%
ACTTTCTTTACCACAAAGAA+TGG + chr4_1:72804557-72804576 None:intergenic 30.0%
AAATATTGTTCTGACTCTAC+GGG + chr4_1:72804707-72804726 None:intergenic 30.0%
AAGCCTAAACCTGAAATAAT+TGG + chr4_1:72804801-72804820 None:intergenic 30.0%
CATTATTGACACTATTGTGT+TGG - chr4_1:72805004-72805023 Msa0570600:CDS 30.0%
!! AAATTTTAGGTATACTGCTG+GGG - chr4_1:72805123-72805142 Msa0570600:CDS 30.0%
!! ACAAAGTGGTTTCCATTTTT+CGG + chr4_1:72805178-72805197 None:intergenic 30.0%
AATGGTGTGTTAATTAAAGG+AGG - chr4_1:72805304-72805323 Msa0570600:intron 30.0%
ATTTCTATGATGCCTATTAG+AGG - chr4_1:72805666-72805685 Msa0570600:CDS 30.0%
!! ATACTGTTGATTCCTCTAAT+AGG + chr4_1:72805681-72805700 None:intergenic 30.0%
ACTCATCAAAGAAGTGAAAA+TGG + chr4_1:72805791-72805810 None:intergenic 30.0%
GATGCCAATGAATTAAAATC+AGG - chr4_1:72805837-72805856 Msa0570600:intron 30.0%
! CATAAGTATTTCTACTGAAG+TGG - chr4_1:72806140-72806159 Msa0570600:intron 30.0%
GAAATATATACAAACCTCCT+TGG + chr4_1:72806361-72806380 None:intergenic 30.0%
!! TAATTTTGAGTGCAGTTTCA+AGG - chr4_1:72806417-72806436 Msa0570600:CDS 30.0%
TATAAAACTATCCCTATCCA+CGG + chr4_1:72806528-72806547 None:intergenic 30.0%
TTATGCACAAGAAAATCAAC+AGG + chr4_1:72806606-72806625 None:intergenic 30.0%
ATTGATGTTATGGTCAAACT+TGG - chr4_1:72806762-72806781 Msa0570600:CDS 30.0%
!!! AAATGTGTTTTTTGACAGGT+TGG - chr4_1:72806791-72806810 Msa0570600:CDS 30.0%
! CAACTATACTACCATCTTTT+TGG + chr4_1:72806877-72806896 None:intergenic 30.0%
! TGTGTTGATGAGAGATAATT+TGG - chr4_1:72807000-72807019 Msa0570600:intron 30.0%
! TCAAGTATTGTAGTAAGTCT+TGG + chr4_1:72807250-72807269 None:intergenic 30.0%
TCAAGGAAAATGCACAAAAT+TGG + chr4_1:72807346-72807365 None:intergenic 30.0%
! AGTTCATTTTAAGCCATGAA+CGG + chr4_1:72807479-72807498 None:intergenic 30.0%
! GATTGGATTATTTGAGATGG+AGG + chr4_1:72801272-72801291 None:intergenic 35.0%
! GAAAAAGCGTGAATGGAAAA+TGG + chr4_1:72801423-72801442 None:intergenic 35.0%
! TTTTCTCTCTCTCGAAATCA+TGG - chr4_1:72801499-72801518 Msa0570600:three_prime_UTR 35.0%
GTGGAAGTTAGTTGAATACT+CGG + chr4_1:72801527-72801546 None:intergenic 35.0%
AGTATTCAACTAACTTCCAC+CGG - chr4_1:72801527-72801546 Msa0570600:exon 35.0%
GTTTCTATTGAAAACGACGT+CGG + chr4_1:72801756-72801775 None:intergenic 35.0%
AAGAATGCAATTGAAGATGC+AGG - chr4_1:72801904-72801923 Msa0570600:CDS 35.0%
TTACATGAACCTGTTTCAAC+CGG - chr4_1:72801943-72801962 Msa0570600:CDS 35.0%
! GGAATTTTAAACGACATCAC+CGG - chr4_1:72802051-72802070 Msa0570600:intron 35.0%
TCTTCTTTGCTTATCACGTT+TGG + chr4_1:72802132-72802151 None:intergenic 35.0%
GTTATTGCAATTGAAGATGC+AGG - chr4_1:72802156-72802175 Msa0570600:intron 35.0%
! TTTGTTCTTTGGTTGATGCA+AGG - chr4_1:72802241-72802260 Msa0570600:intron 35.0%
! TTGTTCTTTGGTTGATGCAA+GGG - chr4_1:72802242-72802261 Msa0570600:intron 35.0%
!!! GTTTTGGAAAGTATGCTTAG+TGG - chr4_1:72802264-72802283 Msa0570600:intron 35.0%
AGTATGCTTAGTGGTATGAA+AGG - chr4_1:72802273-72802292 Msa0570600:intron 35.0%
GTATGCTTAGTGGTATGAAA+GGG - chr4_1:72802274-72802293 Msa0570600:intron 35.0%
TATGCTTAGTGGTATGAAAG+GGG - chr4_1:72802275-72802294 Msa0570600:intron 35.0%
ACATTAAGCTCACTCAACAA+AGG + chr4_1:72802321-72802340 None:intergenic 35.0%
! GATCTAGAACTAAGAACTTG+AGG + chr4_1:72802354-72802373 None:intergenic 35.0%
!! AGTTCTTAGTTCTAGATCGT+TGG - chr4_1:72802356-72802375 Msa0570600:intron 35.0%
! CTGCTTTAAACTCAAACCTT+AGG - chr4_1:72802656-72802675 Msa0570600:CDS 35.0%
TTACATCAGCAGAATCAGAA+AGG + chr4_1:72802704-72802723 None:intergenic 35.0%
ATGAACTAATGCAACCCTTA+TGG + chr4_1:72802749-72802768 None:intergenic 35.0%
CACAAATCAATGCAAAAGCA+TGG + chr4_1:72802931-72802950 None:intergenic 35.0%
GAGTATATGAATGGGATATG+AGG + chr4_1:72803003-72803022 None:intergenic 35.0%
! TCGTTATTACTTTGGAGATG+TGG - chr4_1:72803021-72803040 Msa0570600:CDS 35.0%
! CGTTATTACTTTGGAGATGT+GGG - chr4_1:72803022-72803041 Msa0570600:CDS 35.0%
! TTGGTGAGTGTCATTCAATT+TGG - chr4_1:72803078-72803097 Msa0570600:intron 35.0%
! TGGTGAGTGTCATTCAATTT+GGG - chr4_1:72803079-72803098 Msa0570600:intron 35.0%
! AGTGTCATTCAATTTGGGAT+TGG - chr4_1:72803084-72803103 Msa0570600:intron 35.0%
! TATTTGGAATGTCTTGCCAA+GGG - chr4_1:72803303-72803322 Msa0570600:intron 35.0%
! GAGTTCTACTAGCTTCTTAA+TGG + chr4_1:72803343-72803362 None:intergenic 35.0%
! TCTATTTCTCTTTCTTCCAC+AGG + chr4_1:72803588-72803607 None:intergenic 35.0%
!! CTTTGGTAGCTTTAATGTGA+AGG + chr4_1:72803794-72803813 None:intergenic 35.0%
CACATTAAAGCTACCAAAGT+AGG - chr4_1:72803795-72803814 Msa0570600:intron 35.0%
TATCTGACTCAAGACTGTAT+TGG + chr4_1:72803823-72803842 None:intergenic 35.0%
! AAACTTTTGAATGGGAGCTT+TGG + chr4_1:72803874-72803893 None:intergenic 35.0%
ATAAAAACCATCCAAGAGCA+CGG + chr4_1:72803919-72803938 None:intergenic 35.0%
CAATACTATCAATGTAGGCA+GGG + chr4_1:72803982-72804001 None:intergenic 35.0%
! CTGCCTACATTGATAGTATT+GGG - chr4_1:72803981-72804000 Msa0570600:intron 35.0%
! CTTGAGAAGAGTATAGAAAG+AGG - chr4_1:72804038-72804057 Msa0570600:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr4_1:72804085-72804104 None:intergenic 35.0%
!! TTAGGCCCCAAATTTTAACA+TGG - chr4_1:72804101-72804120 Msa0570600:intron 35.0%
! TGAGAGAGTATATAAAGAGG+AGG - chr4_1:72804247-72804266 Msa0570600:intron 35.0%
!!! CGGTTTTTTAAGGATGAGTT+AGG - chr4_1:72804289-72804308 Msa0570600:intron 35.0%
AATATAGCCAATCCAAAGCT+TGG - chr4_1:72804366-72804385 Msa0570600:intron 35.0%
!! AAATGGAAGTATTTCCCACT+AGG + chr4_1:72804486-72804505 None:intergenic 35.0%
AGTTTGGATTCCATTCTTTG+TGG - chr4_1:72804544-72804563 Msa0570600:intron 35.0%
! TAACTCAGGTACCATTCTTT+TGG - chr4_1:72804937-72804956 Msa0570600:CDS 35.0%
AATGACAGAGCTACAATTGT+AGG + chr4_1:72804988-72805007 None:intergenic 35.0%
! TTGACACTATTGTGTTGGTA+AGG - chr4_1:72805009-72805028 Msa0570600:CDS 35.0%
ACATAAGGGCAAAAACAAAG+TGG + chr4_1:72805192-72805211 None:intergenic 35.0%
CCAGTTTAAGAAATTCTCCA+CGG + chr4_1:72805441-72805460 None:intergenic 35.0%
TGGAGAATTTCTTAAACTGG+TGG - chr4_1:72805441-72805460 Msa0570600:CDS 35.0%
AGTTGAGCTCATTGTCAAAA+AGG + chr4_1:72805604-72805623 None:intergenic 35.0%
ATAGGCATCATAGAAATGCA+AGG + chr4_1:72805663-72805682 None:intergenic 35.0%
!!! CCACCCTGATTTTAATTCAT+TGG + chr4_1:72805844-72805863 None:intergenic 35.0%
CCAATGAATTAAAATCAGGG+TGG - chr4_1:72805841-72805860 Msa0570600:intron 35.0%
! AAGGAATATGTTTTGTGGAG+AGG - chr4_1:72805985-72806004 Msa0570600:intron 35.0%
! AGGAATATGTTTTGTGGAGA+GGG - chr4_1:72805986-72806005 Msa0570600:intron 35.0%
TCCAAACGATTGCTTATTTG+AGG - chr4_1:72806068-72806087 Msa0570600:intron 35.0%
TCCTCAAATAAGCAATCGTT+TGG + chr4_1:72806072-72806091 None:intergenic 35.0%
!! GAGTATTGATTGGAGTCTTA+GGG - chr4_1:72806223-72806242 Msa0570600:intron 35.0%
!! AGTATTGATTGGAGTCTTAG+GGG - chr4_1:72806224-72806243 Msa0570600:intron 35.0%
AGAAGCTTCTGTTGTTATAG+AGG - chr4_1:72806266-72806285 Msa0570600:intron 35.0%
GAAGCTTCTGTTGTTATAGA+GGG - chr4_1:72806267-72806286 Msa0570600:intron 35.0%
TTATCTCCTGTAACCATTAC+AGG + chr4_1:72806315-72806334 None:intergenic 35.0%
TAATGGTTACAGGAGATAAC+TGG - chr4_1:72806316-72806335 Msa0570600:CDS 35.0%
!!! GCAAAAGATGTTGGTTTTCT+AGG + chr4_1:72806457-72806476 None:intergenic 35.0%
! GAAAACCAACATCTTTTGCA+TGG - chr4_1:72806458-72806477 Msa0570600:CDS 35.0%
ATGTTCCATGCAAAAGATGT+TGG + chr4_1:72806466-72806485 None:intergenic 35.0%
! AACATCTTTTGCATGGAACA+TGG - chr4_1:72806465-72806484 Msa0570600:CDS 35.0%
TGAAAAACAAAATTGAGCCG+TGG - chr4_1:72806508-72806527 Msa0570600:CDS 35.0%
TTGGGCAGATATTGATGTTA+TGG - chr4_1:72806752-72806771 Msa0570600:CDS 35.0%
GTTCGTTCATTCCAAAAAGA+TGG - chr4_1:72806863-72806882 Msa0570600:CDS 35.0%
AGATGGTAGTATAGTTGCAA+TGG - chr4_1:72806880-72806899 Msa0570600:CDS 35.0%
TGGTACGGCAATAATATTGT+AGG + chr4_1:72807101-72807120 None:intergenic 35.0%
GCACAAAATTGGAATCACAA+GGG + chr4_1:72807335-72807354 None:intergenic 35.0%
TGCACAAAATTGGAATCACA+AGG + chr4_1:72807336-72807355 None:intergenic 35.0%
TACATTTGAACAATGAGTGC+AGG + chr4_1:72807379-72807398 None:intergenic 35.0%
TTGTTCATGAGATAGGTAGA+GGG + chr4_1:72807446-72807465 None:intergenic 35.0%
TTTGTTCATGAGATAGGTAG+AGG + chr4_1:72807447-72807466 None:intergenic 35.0%
! CATGAGTTTGTTCATGAGAT+AGG + chr4_1:72807453-72807472 None:intergenic 35.0%
GAAGGTGATACGATACAGAT+TGG + chr4_1:72801289-72801308 None:intergenic 40.0%
! AAAGAGTTTTCCGATGGAGA+TGG + chr4_1:72801377-72801396 None:intergenic 40.0%
! GAGGAAAGAAAAAGCGTGAA+TGG + chr4_1:72801430-72801449 None:intergenic 40.0%
ATGAGGTGAATACGAGAGAA+AGG + chr4_1:72801475-72801494 None:intergenic 40.0%
!!! GTTGACGTCGTTTTTATCGT+AGG + chr4_1:72801600-72801619 None:intergenic 40.0%
TGTTTCAACCGGACTTAAAC+CGG - chr4_1:72801954-72801973 Msa0570600:CDS 40.0%
TAAACCGGTTGGAGATAGTA+CGG - chr4_1:72801969-72801988 Msa0570600:CDS 40.0%
CATCACCGGAGTAAAAAAAG+CGG - chr4_1:72802065-72802084 Msa0570600:intron 40.0%
!! GTGGCTTTAGCTACTTCATT+AGG - chr4_1:72802090-72802109 Msa0570600:intron 40.0%
!!! GAGATTGTTTTAGGGGTTGT+AGG - chr4_1:72802216-72802235 Msa0570600:intron 40.0%
!! TTTGGTTGATGCAAGGGTTT+TGG - chr4_1:72802248-72802267 Msa0570600:intron 40.0%
TAGAAGCCATTCTCGCATAA+GGG + chr4_1:72802434-72802453 None:intergenic 40.0%
TTAGAAGCCATTCTCGCATA+AGG + chr4_1:72802435-72802454 None:intergenic 40.0%
CAGAGAGTTCGTCTATGTTT+CGG - chr4_1:72802463-72802482 Msa0570600:CDS 40.0%
CATTCTACACTAACACCCTA+AGG + chr4_1:72802675-72802694 None:intergenic 40.0%
ATCAGCAGAATCAGAAAGGA+TGG + chr4_1:72802700-72802719 None:intergenic 40.0%
TGGAGCATAAAATTCAGTGG+AGG + chr4_1:72802729-72802748 None:intergenic 40.0%
AATTACCCCCATGAAGAAGA+GGG + chr4_1:72802977-72802996 None:intergenic 40.0%
AAATTACCCCCATGAAGAAG+AGG + chr4_1:72802978-72802997 None:intergenic 40.0%
AACCAATCATCCATGAGGAA+AGG + chr4_1:72803048-72803067 None:intergenic 40.0%
ACTTCAACCAATCATCCATG+AGG + chr4_1:72803053-72803072 None:intergenic 40.0%
! TCATGGATGATTGGTTGAAG+TGG - chr4_1:72803052-72803071 Msa0570600:CDS 40.0%
! CATGGATGATTGGTTGAAGT+GGG - chr4_1:72803053-72803072 Msa0570600:CDS 40.0%
GCTTTCAGAGCTCTTAGAAA+TGG - chr4_1:72803126-72803145 Msa0570600:intron 40.0%
!! ATGGATGTCCTTGTTGCTTT+GGG - chr4_1:72803159-72803178 Msa0570600:intron 40.0%
TCTGTTTGTGCTCTTCTGTA+TGG - chr4_1:72803204-72803223 Msa0570600:intron 40.0%
! GTATTTGGAATGTCTTGCCA+AGG - chr4_1:72803302-72803321 Msa0570600:intron 40.0%
! ATTTGGAATGTCTTGCCAAG+GGG - chr4_1:72803304-72803323 Msa0570600:intron 40.0%
ACAACCAATAAAGCTGTTGC+AGG + chr4_1:72803369-72803388 None:intergenic 40.0%
! GTCACTAGGTTGAATAAGCA+AGG + chr4_1:72803613-72803632 None:intergenic 40.0%
GACACATTAAAAGTTCTGCC+TGG - chr4_1:72803630-72803649 Msa0570600:CDS 40.0%
ATTTACATAACTTGAGCCCC+AGG + chr4_1:72803685-72803704 None:intergenic 40.0%
! GTAAATGAGAGTATGGTGAC+TGG - chr4_1:72803699-72803718 Msa0570600:intron 40.0%
GAGATCAATGCATCTGTCAT+TGG - chr4_1:72803744-72803763 Msa0570600:intron 40.0%
ATCAATGCATCTGTCATTGG+AGG - chr4_1:72803747-72803766 Msa0570600:intron 40.0%
AAGGACACCATGCAAATTGA+TGG + chr4_1:72803775-72803794 None:intergenic 40.0%
GACTGTATTGGATCCTACTT+TGG + chr4_1:72803811-72803830 None:intergenic 40.0%
CCAATACTATCAATGTAGGC+AGG + chr4_1:72803983-72804002 None:intergenic 40.0%
! CCTGCCTACATTGATAGTAT+TGG - chr4_1:72803980-72803999 Msa0570600:intron 40.0%
! GAGTCTTATCTATCCGATGT+GGG + chr4_1:72804019-72804038 None:intergenic 40.0%
! AGAGTCTTATCTATCCGATG+TGG + chr4_1:72804020-72804039 None:intergenic 40.0%
! GAGAAGAGTATAGAAAGAGG+AGG - chr4_1:72804041-72804060 Msa0570600:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr4_1:72804083-72804102 Msa0570600:intron 40.0%
ATCAGAGCTTGTCGAATTCA+AGG - chr4_1:72804125-72804144 Msa0570600:intron 40.0%
TCAGAGCTTGTCGAATTCAA+GGG - chr4_1:72804126-72804145 Msa0570600:intron 40.0%
!! CCTTAAAAAACCGGCTTGTA+AGG + chr4_1:72804282-72804301 None:intergenic 40.0%
!!! CCTTACAAGCCGGTTTTTTA+AGG - chr4_1:72804279-72804298 Msa0570600:intron 40.0%
!! TCTTTCTCCAAGCTTTGGAT+TGG + chr4_1:72804376-72804395 None:intergenic 40.0%
AATCCAAAGCTTGGAGAAAG+AGG - chr4_1:72804375-72804394 Msa0570600:intron 40.0%
TCTGTTGAATCCTTGTGACA+TGG - chr4_1:72804435-72804454 Msa0570600:intron 40.0%
CACAATGAGTTGCAAAGAGT+CGG - chr4_1:72804632-72804651 Msa0570600:intron 40.0%
!!! AGTCGGCATTTAGTTTTCCT+GGG - chr4_1:72804649-72804668 Msa0570600:intron 40.0%
ATCCTTAGAAAGAGCTCAGA+TGG - chr4_1:72805330-72805349 Msa0570600:intron 40.0%
TAAGACAGGAACTCTAACTC+AGG - chr4_1:72805372-72805391 Msa0570600:intron 40.0%
AAGACAGGAACTCTAACTCA+GGG - chr4_1:72805373-72805392 Msa0570600:intron 40.0%
CCGTGGAGAATTTCTTAAAC+TGG - chr4_1:72805438-72805457 Msa0570600:CDS 40.0%
AGCAGAGAGTAACCATCATT+GGG + chr4_1:72805484-72805503 None:intergenic 40.0%
AAGCAGAGAGTAACCATCAT+TGG + chr4_1:72805485-72805504 None:intergenic 40.0%
CTCATTGTCAAAAAGGTGGA+AGG + chr4_1:72805597-72805616 None:intergenic 40.0%
TGAGCTCATTGTCAAAAAGG+TGG + chr4_1:72805601-72805620 None:intergenic 40.0%
!! TGTAATATCGCTTTTGCCAG+CGG + chr4_1:72805759-72805778 None:intergenic 40.0%
! TGAGGAAGTATGTTCTGATC+AGG - chr4_1:72806086-72806105 Msa0570600:intron 40.0%
GAAGTATGTTCTGATCAGGT+TGG - chr4_1:72806090-72806109 Msa0570600:intron 40.0%
!! TTGAAGAAAGTGCCAAGACT+GGG - chr4_1:72806181-72806200 Msa0570600:intron 40.0%
!! GGAGTATTGATTGGAGTCTT+AGG - chr4_1:72806222-72806241 Msa0570600:intron 40.0%
AACAAAATTGAGCCGTGGAT+AGG - chr4_1:72806513-72806532 Msa0570600:CDS 40.0%
ACAAAATTGAGCCGTGGATA+GGG - chr4_1:72806514-72806533 Msa0570600:CDS 40.0%
CTTGAAAACGAGACCAGTTA+TGG + chr4_1:72806580-72806599 None:intergenic 40.0%
AGGTTGGCATTCAAGATGTT+AGG - chr4_1:72806807-72806826 Msa0570600:CDS 40.0%
GGTTGGCATTCAAGATGTTA+GGG - chr4_1:72806808-72806827 Msa0570600:CDS 40.0%
TGGTAGTATAGTTGCAATGG+TGG - chr4_1:72806883-72806902 Msa0570600:CDS 40.0%
GGTAGTATAGTTGCAATGGT+GGG - chr4_1:72806884-72806903 Msa0570600:CDS 40.0%
GGCAATAATATTGTAGGCCA+TGG + chr4_1:72807095-72807114 None:intergenic 40.0%
CAGTGAAGGAAATAAAACCC+CGG + chr4_1:72807131-72807150 None:intergenic 40.0%
!!! GGGGTTTTATTTCCTTCACT+GGG - chr4_1:72807130-72807149 Msa0570600:CDS 40.0%
! TACAAAGGGTGCAAATGAGT+TGG - chr4_1:72807308-72807327 Msa0570600:five_prime_UTR 40.0%
AGTGTATCTCATATGTGCGT+TGG - chr4_1:72807505-72807524 Msa0570600:five_prime_UTR 40.0%
!! TGCTGTTTCACCATCTCCAT+CGG - chr4_1:72801364-72801383 Msa0570600:three_prime_UTR 45.0%
GAGAGAGAGAAAATGCGATG+AGG + chr4_1:72801492-72801511 None:intergenic 45.0%
AAAAACGACGTCAACGACGA+CGG - chr4_1:72801605-72801624 Msa0570600:CDS 45.0%
!!! GTTTTGAAGTAAAGCGACGG+AGG + chr4_1:72801729-72801748 None:intergenic 45.0%
GGTTTAAGTCCGGTTGAAAC+AGG + chr4_1:72801955-72801974 None:intergenic 45.0%
! ATCTCCAACCGGTTTAAGTC+CGG + chr4_1:72801965-72801984 None:intergenic 45.0%
!!! CACCACCGCTTTTTTTACTC+CGG + chr4_1:72802073-72802092 None:intergenic 45.0%
GGTTGTAGGCGTTTGTTCTT+TGG - chr4_1:72802230-72802249 Msa0570600:intron 45.0%
TTAGTGGTATGAAAGGGGTG+AGG - chr4_1:72802280-72802299 Msa0570600:intron 45.0%
TAGAAGCCCTTATGCGAGAA+TGG - chr4_1:72802425-72802444 Msa0570600:intron 45.0%
! GCGAGAATGGCTTCTAAAGA+TGG - chr4_1:72802438-72802457 Msa0570600:intron 45.0%
ACTCACACTAAGAAGCAAGC+TGG + chr4_1:72802499-72802518 None:intergenic 45.0%
TCAGATTCCCCTCTTCTTCA+TGG - chr4_1:72802966-72802985 Msa0570600:CDS 45.0%
CAGATTCCCCTCTTCTTCAT+GGG - chr4_1:72802967-72802986 Msa0570600:CDS 45.0%
AGATTCCCCTCTTCTTCATG+GGG - chr4_1:72802968-72802987 Msa0570600:CDS 45.0%
ATTACCCCCATGAAGAAGAG+GGG + chr4_1:72802976-72802995 None:intergenic 45.0%
! TGATTGGTTGAAGTGGGCAT+TGG - chr4_1:72803059-72803078 Msa0570600:CDS 45.0%
! CATGGATGTCCTTGTTGCTT+TGG - chr4_1:72803158-72803177 Msa0570600:intron 45.0%
CTGTAGTTCCCAAAGCAACA+AGG + chr4_1:72803170-72803189 None:intergenic 45.0%
! ATGGCGCTCTTACTGGATTT+TGG - chr4_1:72803223-72803242 Msa0570600:intron 45.0%
! CACTCCTGCAACAGCTTTAT+TGG - chr4_1:72803362-72803381 Msa0570600:CDS 45.0%
! TTTTCTAGATGGCAGACCTG+TGG - chr4_1:72803569-72803588 Msa0570600:CDS 45.0%
CAGGTAACAATACCATCAGC+GGG + chr4_1:72803666-72803685 None:intergenic 45.0%
CCAGGTAACAATACCATCAG+CGG + chr4_1:72803667-72803686 None:intergenic 45.0%
CGCTGATGGTATTGTTACCT+GGG - chr4_1:72803665-72803684 Msa0570600:CDS 45.0%
GCTGATGGTATTGTTACCTG+GGG - chr4_1:72803666-72803685 Msa0570600:CDS 45.0%
CGAGTCTATACCTGTTTCGA+AGG - chr4_1:72803722-72803741 Msa0570600:intron 45.0%
! GCATTGATCTCCTTCGAAAC+AGG + chr4_1:72803735-72803754 None:intergenic 45.0%
!! GGAGGTACCATCAATTTGCA+TGG - chr4_1:72803765-72803784 Msa0570600:intron 45.0%
!! AATGGGAGCTTTGGACATCT+GGG + chr4_1:72803865-72803884 None:intergenic 45.0%
GAAAAACCCAAGTCCCACAT+CGG - chr4_1:72804003-72804022 Msa0570600:intron 45.0%
ATCTATCCGATGTGGGACTT+GGG + chr4_1:72804012-72804031 None:intergenic 45.0%
TATCTATCCGATGTGGGACT+TGG + chr4_1:72804013-72804032 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr4_1:72804076-72804095 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr4_1:72804073-72804092 Msa0570600:intron 45.0%
! CTTGGTGCGTGAATAGGTTT+AGG + chr4_1:72804155-72804174 None:intergenic 45.0%
GAAAAACCCAAGTCCCACAT+CGG - chr4_1:72804003-72804022 Msa0570600:intron 45.0%
ATCTATCCGATGTGGGACTT+GGG + chr4_1:72804012-72804031 None:intergenic 45.0%
TATCTATCCGATGTGGGACT+TGG + chr4_1:72804013-72804032 None:intergenic 45.0%
AGTCCCACATCGGATAGATA+AGG - chr4_1:72804013-72804032 Msa0570600:intron 45.0%
! GAGCCTTATCTATCCGATGT+GGG + chr4_1:72804226-72804245 None:intergenic 45.0%
! AGAGCCTTATCTATCCGATG+TGG + chr4_1:72804227-72804246 None:intergenic 45.0%
!! AAAAACCGGCTTGTAAGGTG+AGG + chr4_1:72804277-72804296 None:intergenic 45.0%
CAAAGCTTGGAGAAAGAGGA+GGG - chr4_1:72804379-72804398 Msa0570600:intron 45.0%
CATTGCTAGTCCATGTCACA+AGG + chr4_1:72804448-72804467 None:intergenic 45.0%
!! TGGAAGTATTTCCCACTAGG+CGG + chr4_1:72804483-72804502 None:intergenic 45.0%
!!! GAGTCGGCATTTAGTTTTCC+TGG - chr4_1:72804648-72804667 Msa0570600:intron 45.0%
!!! GTACCATTCTTTTGGCTTGC+AGG - chr4_1:72804945-72804964 Msa0570600:CDS 45.0%
CTACCTGCAAGCCAAAAGAA+TGG + chr4_1:72804951-72804970 None:intergenic 45.0%
TTGGAGCATACCCAGATGAA+TGG - chr4_1:72805149-72805168 Msa0570600:CDS 45.0%
! TTTTCGGCAGCCATTCATCT+GGG + chr4_1:72805162-72805181 None:intergenic 45.0%
!! TTTTTCGGCAGCCATTCATC+TGG + chr4_1:72805163-72805182 None:intergenic 45.0%
GATGAATGGCTGCCGAAAAA+TGG - chr4_1:72805163-72805182 Msa0570600:CDS 45.0%
CACCATCTGAGCTCTTTCTA+AGG + chr4_1:72805335-72805354 None:intergenic 45.0%
!! GTAATATCGCTTTTGCCAGC+GGG + chr4_1:72805758-72805777 None:intergenic 45.0%
GATGAGTCCTCTCTTACCAA+TGG - chr4_1:72805804-72805823 Msa0570600:CDS 45.0%
TTGGGATCCATTGGTAAGAG+AGG + chr4_1:72805814-72805833 None:intergenic 45.0%
!!! GGCATCATTTTGGGATCCAT+TGG + chr4_1:72805823-72805842 None:intergenic 45.0%
TGGAATAGCAGAGAAGTCTG+AGG + chr4_1:72805877-72805896 None:intergenic 45.0%
TCAGACTTCTCTGCTATTCC+AGG - chr4_1:72805876-72805895 Msa0570600:intron 45.0%
ACTTCTCTGCTATTCCAGGA+AGG - chr4_1:72805880-72805899 Msa0570600:intron 45.0%
CTTCTCTGCTATTCCAGGAA+GGG - chr4_1:72805881-72805900 Msa0570600:intron 45.0%
TTCTCTGCTATTCCAGGAAG+GGG - chr4_1:72805882-72805901 Msa0570600:intron 45.0%
GGTGTGCAGTGCATTATAGA+CGG - chr4_1:72805903-72805922 Msa0570600:intron 45.0%
! TATAGACGGACAGCGTGTTT+TGG - chr4_1:72805917-72805936 Msa0570600:intron 45.0%
AGGGACACATGTCTCATTAG+AGG - chr4_1:72806005-72806024 Msa0570600:intron 45.0%
!! GTTCTGATCAGGTTGGTAAC+AGG - chr4_1:72806097-72806116 Msa0570600:intron 45.0%
!! CTTGAAGAAAGTGCCAAGAC+TGG - chr4_1:72806180-72806199 Msa0570600:intron 45.0%
ATACTCCATTGCACGCTACA+AGG + chr4_1:72806209-72806228 None:intergenic 45.0%
!! GCGTGCAATGGAGTATTGAT+TGG - chr4_1:72806213-72806232 Msa0570600:intron 45.0%
TATAGAGGGCCTCCAGAAAA+TGG - chr4_1:72806281-72806300 Msa0570600:intron 45.0%
ATAGAGGGCCTCCAGAAAAT+GGG - chr4_1:72806282-72806301 Msa0570600:intron 45.0%
AATGGGAATCACGCCTGTAA+TGG - chr4_1:72806299-72806318 Msa0570600:intron 45.0%
ATCACGCCTGTAATGGTTAC+AGG - chr4_1:72806306-72806325 Msa0570600:intron 45.0%
CATTCAAGATGTTAGGGCAG+AGG - chr4_1:72806814-72806833 Msa0570600:CDS 45.0%
!! ATAGTTGCAATGGTGGGTGA+CGG - chr4_1:72806890-72806909 Msa0570600:CDS 45.0%
GCAGATGTTGGTATGGCAAT+TGG - chr4_1:72806941-72806960 Msa0570600:intron 45.0%
TTGGTATGGCAATTGGAGCT+GGG - chr4_1:72806948-72806967 Msa0570600:intron 45.0%
!!! CGGGGTTTTATTTCCTTCAC+TGG - chr4_1:72807129-72807148 Msa0570600:CDS 45.0%
CAAACTCATGTGTCCGTTCA+TGG - chr4_1:72807463-72807482 Msa0570600:five_prime_UTR 45.0%
CACAATGTTATTGACGCCTC+AGG - chr4_1:72807531-72807550 Msa0570600:five_prime_UTR 45.0%
!!! AATATATTTTATTTAAATTC+AGG - chr4_1:72805719-72805738 Msa0570600:CDS 5.0%
GATTCTGACCTGAATCCGGT+TGG + chr4_1:72801633-72801652 None:intergenic 50.0%
CGGTGATTCTGACCTGAATC+CGG + chr4_1:72801637-72801656 None:intergenic 50.0%
CGGATTCAGGTCAGAATCAC+CGG - chr4_1:72801635-72801654 Msa0570600:CDS 50.0%
TTCGACGGAGTTAGAGCAAG+CGG + chr4_1:72801672-72801691 None:intergenic 50.0%
GGCTTGAATTACACCGTCGA+CGG + chr4_1:72801708-72801727 None:intergenic 50.0%
TCAACCGGACTTAAACCGGT+TGG - chr4_1:72801958-72801977 Msa0570600:CDS 50.0%
ACCACCGTACTATCTCCAAC+CGG + chr4_1:72801976-72801995 None:intergenic 50.0%
GTTGGAGATAGTACGGTGGT+TGG - chr4_1:72801976-72801995 Msa0570600:CDS 50.0%
GTGGTTGGACAGTTCACGAT+CGG - chr4_1:72801991-72802010 Msa0570600:CDS 50.0%
GCGTGTGTGAATTCCGTTGA+AGG - chr4_1:72802030-72802049 Msa0570600:intron 50.0%
CACCGGAGTAAAAAAAGCGG+TGG - chr4_1:72802068-72802087 Msa0570600:intron 50.0%
CGGAGTAAAAAAAGCGGTGG+TGG - chr4_1:72802071-72802090 Msa0570600:intron 50.0%
TGAAAGGGGTGAGGCAGTTT+AGG - chr4_1:72802289-72802308 Msa0570600:intron 50.0%
GATTCCCCTCTTCTTCATGG+GGG - chr4_1:72802969-72802988 Msa0570600:CDS 50.0%
GGCCTTTCCTCATGGATGAT+TGG - chr4_1:72803043-72803062 Msa0570600:CDS 50.0%
CTTCTGTATGGCGCTCTTAC+TGG - chr4_1:72803216-72803235 Msa0570600:intron 50.0%
TCAGCGGGAATCTTTGTACC+AGG + chr4_1:72803651-72803670 None:intergenic 50.0%
GGTACAAAGATTCCCGCTGA+TGG - chr4_1:72803651-72803670 Msa0570600:CDS 50.0%
CCGCTGATGGTATTGTTACC+TGG - chr4_1:72803664-72803683 Msa0570600:CDS 50.0%
!! GAATGGGAGCTTTGGACATC+TGG + chr4_1:72803866-72803885 None:intergenic 50.0%
! AAGTATTGTGGCCGTGCTCT+TGG - chr4_1:72803905-72803924 Msa0570600:intron 50.0%
GCAATCCTCACCTTACAAGC+CGG - chr4_1:72804063-72804082 Msa0570600:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr4_1:72804071-72804090 None:intergenic 50.0%
GGTGCGTGAATAGGTTTAGG+CGG + chr4_1:72804152-72804171 None:intergenic 50.0%
!! TTTGGGCTTGGTGCGTGAAT+AGG + chr4_1:72804161-72804180 None:intergenic 50.0%
GCAATCCTCACCTTACAAGC+CGG - chr4_1:72804063-72804082 Msa0570600:intron 50.0%
CCTCCTCTTTCTCCAAGCTT+TGG + chr4_1:72804381-72804400 None:intergenic 50.0%
CCAAAGCTTGGAGAAAGAGG+AGG - chr4_1:72804378-72804397 Msa0570600:intron 50.0%
! GAAGTATTTCCCACTAGGCG+GGG + chr4_1:72804481-72804500 None:intergenic 50.0%
!! GGAAGTATTTCCCACTAGGC+GGG + chr4_1:72804482-72804501 None:intergenic 50.0%
! ATTTTCCAGAACAGCAGCCC+AGG + chr4_1:72804669-72804688 None:intergenic 50.0%
AAGGAGCTCCAACGATCAGA+GGG + chr4_1:72804741-72804760 None:intergenic 50.0%
TAAGGAGCTCCAACGATCAG+AGG + chr4_1:72804742-72804761 None:intergenic 50.0%
ATTGCATGCCCATGTGCACT+TGG - chr4_1:72805232-72805251 Msa0570600:intron 50.0%
ATGCCCATGTGCACTTGGTT+TGG - chr4_1:72805237-72805256 Msa0570600:intron 50.0%
TCATGGTGGCAACAGGTGTT+GGG - chr4_1:72805275-72805294 Msa0570600:intron 50.0%
!! ACAGGTGTTGGGGCTAACAA+TGG - chr4_1:72805286-72805305 Msa0570600:intron 50.0%
! TCTGTTGCCAAGGTGTTTGC+AGG - chr4_1:72805409-72805428 Msa0570600:intron 50.0%
! TGCCAAGGTGTTTGCAGGAA+TGG - chr4_1:72805414-72805433 Msa0570600:intron 50.0%
GTCCATTCCTGCAAACACCT+TGG + chr4_1:72805419-72805438 None:intergenic 50.0%
TAAACTGGTGGCTTCTGCTG+AGG - chr4_1:72805453-72805472 Msa0570600:CDS 50.0%
GCTGAGGTAACTCCCAATGA+TGG - chr4_1:72805469-72805488 Msa0570600:CDS 50.0%
! GCGTGATTCCCATTTTCTGG+AGG + chr4_1:72806293-72806312 None:intergenic 50.0%
! CAGGCGTGATTCCCATTTTC+TGG + chr4_1:72806296-72806315 None:intergenic 50.0%
AGAGGTTATGCCTGCAGGAA+AGG - chr4_1:72806832-72806851 Msa0570600:CDS 50.0%
ACATCTGCAGCAGCTAATGC+AGG + chr4_1:72806929-72806948 None:intergenic 50.0%
GCATTAGCTGCTGCAGATGT+TGG - chr4_1:72806929-72806948 Msa0570600:intron 50.0%
AGCTGCTGCAGATGTTGGTA+TGG - chr4_1:72806934-72806953 Msa0570600:intron 50.0%
GTTGGTATGGCAATTGGAGC+TGG - chr4_1:72806947-72806966 Msa0570600:intron 50.0%
AATAAAACCCCGGCAGCAAC+TGG + chr4_1:72807121-72807140 None:intergenic 50.0%
GGAAGCTTGATTCCCAGTGA+AGG + chr4_1:72807145-72807164 None:intergenic 50.0%
TGGGAATCAAGCTTCCACCA+TGG - chr4_1:72807149-72807168 Msa0570600:CDS 50.0%
GGGAATCAAGCTTCCACCAT+GGG - chr4_1:72807150-72807169 Msa0570600:CDS 50.0%
GCGAACATCTTCGAGATCGC+CGG + chr4_1:72801567-72801586 None:intergenic 55.0%
TCAACGACGACGGAACCAAC+CGG - chr4_1:72801615-72801634 Msa0570600:CDS 55.0%
ACCGGTTGGAGATAGTACGG+TGG - chr4_1:72801972-72801991 Msa0570600:CDS 55.0%
GTTGGACAGTTCACGATCGG+CGG - chr4_1:72801994-72802013 Msa0570600:CDS 55.0%
GATCGGCGGTATGACATGTG+CGG - chr4_1:72802008-72802027 Msa0570600:intron 55.0%
GAGATGTGGGCCTTTCCTCA+TGG - chr4_1:72803035-72803054 Msa0570600:CDS 55.0%
GGCATCAGATGTCTTCCCCT+TGG + chr4_1:72803322-72803341 None:intergenic 55.0%
ATTGTGGCCGTGCTCTTGGA+TGG - chr4_1:72803909-72803928 Msa0570600:intron 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG - chr4_1:72804168-72804187 Msa0570600:intron 55.0%
! TGATAGTGTTCCCCGCCTAG+TGG - chr4_1:72804468-72804487 Msa0570600:intron 55.0%
GATAGTGTTCCCCGCCTAGT+GGG - chr4_1:72804469-72804488 Msa0570600:intron 55.0%
! GTTTTCCTGGGCTGCTGTTC+TGG - chr4_1:72804661-72804680 Msa0570600:intron 55.0%
TGCCTTACCCCTCTGATCGT+TGG - chr4_1:72804730-72804749 Msa0570600:intron 55.0%
CTCCAACGATCAGAGGGGTA+AGG + chr4_1:72804735-72804754 None:intergenic 55.0%
AGGAGCTCCAACGATCAGAG+GGG + chr4_1:72804740-72804759 None:intergenic 55.0%
AGGTATACTGCTGGGGCTCT+TGG - chr4_1:72805130-72805149 Msa0570600:CDS 55.0%
GACACCAACTGCTGTCATGG+TGG - chr4_1:72805261-72805280 Msa0570600:intron 55.0%
GTTGCCACCATGACAGCAGT+TGG + chr4_1:72805268-72805287 None:intergenic 55.0%
ACTGCTGTCATGGTGGCAAC+AGG - chr4_1:72805268-72805287 Msa0570600:intron 55.0%
GTCATGGTGGCAACAGGTGT+TGG - chr4_1:72805274-72805293 Msa0570600:intron 55.0%
! CATGGTGGCAACAGGTGTTG+GGG - chr4_1:72805276-72805295 Msa0570600:intron 55.0%
AGCCACTGTCTCTGTTGCCA+AGG - chr4_1:72805399-72805418 Msa0570600:intron 55.0%
CACCTTGGCAACAGAGACAG+TGG + chr4_1:72805404-72805423 None:intergenic 55.0%
GTGTTTGCAGGAATGGACCG+TGG - chr4_1:72805421-72805440 Msa0570600:intron 55.0%
!! GGTTGGTAACAGGAAGCTGC+TGG - chr4_1:72806107-72806126 Msa0570600:intron 55.0%
TGGTAACAGGAAGCTGCTGG+TGG - chr4_1:72806110-72806129 Msa0570600:intron 55.0%
AGGAAGCTGCTGGTGGAAAG+TGG - chr4_1:72806117-72806136 Msa0570600:intron 55.0%
CGCTACAAGGATCCCAGTCT+TGG + chr4_1:72806196-72806215 None:intergenic 55.0%
GGGATCCTTGTAGCGTGCAA+TGG - chr4_1:72806201-72806220 Msa0570600:intron 55.0%
AACTGCTCGAGCTGTTGCCA+AGG - chr4_1:72806341-72806360 Msa0570600:CDS 55.0%
ACCACATCAGCCTTTCCTGC+AGG + chr4_1:72806845-72806864 None:intergenic 55.0%
ATTGCCGTACCAGTTGCTGC+CGG - chr4_1:72807109-72807128 Msa0570600:CDS 55.0%
! AAGCTTCCACCATGGGTTGC+TGG - chr4_1:72807157-72807176 Msa0570600:CDS 55.0%
ATGCATGCACCAGCAACCCA+TGG + chr4_1:72807169-72807188 None:intergenic 55.0%
! ATGGGTTGCTGGTGCATGCA+TGG - chr4_1:72807168-72807187 Msa0570600:CDS 55.0%
GAACAATGAGTGCAGGCGAG+AGG + chr4_1:72807372-72807391 None:intergenic 55.0%
CAACTAACTTCCACCGGCGC+CGG - chr4_1:72801533-72801552 Msa0570600:exon 60.0%
CGACGGAACCAACCGGATTC+AGG - chr4_1:72801622-72801641 Msa0570600:CDS 60.0%
GGACATGAGAGCGGCTTCGA+CGG + chr4_1:72801687-72801706 None:intergenic 60.0%
ACCGTCGACGGACATGAGAG+CGG + chr4_1:72801696-72801715 None:intergenic 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG - chr4_1:72804167-72804186 Msa0570600:intron 60.0%
CCTCACGCCCAGCACTCTTT+GGG + chr4_1:72804178-72804197 None:intergenic 60.0%
!! CCAAAGAGTGCTGGGCGTGA+GGG - chr4_1:72804176-72804195 Msa0570600:intron 60.0%
!! CAAAGAGTGCTGGGCGTGAG+GGG - chr4_1:72804177-72804196 Msa0570600:intron 60.0%
!! AAAGAGTGCTGGGCGTGAGG+GGG - chr4_1:72804178-72804197 Msa0570600:intron 60.0%
ATGCACTGCACACCCCTTCC+TGG + chr4_1:72805897-72805916 None:intergenic 60.0%
TGCTCGAGCTGTTGCCAAGG+AGG - chr4_1:72806344-72806363 Msa0570600:CDS 60.0%
AGGGCAGAGGTTATGCCTGC+AGG - chr4_1:72806827-72806846 Msa0570600:CDS 60.0%
GCCTGCAGGAAAGGCTGATG+TGG - chr4_1:72806841-72806860 Msa0570600:CDS 60.0%
TTGCCGTACCAGTTGCTGCC+GGG - chr4_1:72807110-72807129 Msa0570600:CDS 60.0%
AACCCCGGCAGCAACTGGTA+CGG + chr4_1:72807116-72807135 None:intergenic 60.0%
CATGCACCAGCAACCCATGG+TGG + chr4_1:72807166-72807185 None:intergenic 60.0%
GAGATCGCCGGAGTCATCGC+CGG + chr4_1:72801555-72801574 None:intergenic 65.0%
GGAGTTAGAGCAAGCGGCGC+AGG + chr4_1:72801666-72801685 None:intergenic 65.0%
GCCGCTCTCATGTCCGTCGA+CGG - chr4_1:72801692-72801711 Msa0570600:CDS 65.0%
CGCCCAGCACTCTTTGGGCT+TGG + chr4_1:72804173-72804192 None:intergenic 65.0%
!! CCCAAAGAGTGCTGGGCGTG+AGG - chr4_1:72804175-72804194 Msa0570600:intron 65.0%
CCCTCACGCCCAGCACTCTT+TGG + chr4_1:72804179-72804198 None:intergenic 65.0%
!! AAGAGTGCTGGGCGTGAGGG+GGG - chr4_1:72804179-72804198 Msa0570600:intron 65.0%
! TGGGCGTGAGGGGGGTGTAT+TGG - chr4_1:72804187-72804206 Msa0570600:intron 65.0%
! GGGCGTGAGGGGGGTGTATT+GGG - chr4_1:72804188-72804207 Msa0570600:intron 65.0%
GGCTAGCAGTGAACACCCGC+TGG - chr4_1:72805740-72805759 Msa0570600:CDS 65.0%
TGCCGTACCAGTTGCTGCCG+GGG - chr4_1:72807111-72807130 Msa0570600:CDS 65.0%
GTGCAGGCGAGAGGAGCTCA+AGG + chr4_1:72807363-72807382 None:intergenic 65.0%
GCAAGCGGCGCAGGTCATGC+CGG + chr4_1:72801657-72801676 None:intergenic 70.0%
!! ACCGGCGCCGGCGATGACTC+CGG - chr4_1:72801545-72801564 Msa0570600:CDS 75.0%
!! GGAGTCATCGCCGGCGCCGG+TGG + chr4_1:72801546-72801565 None:intergenic 80.0%
! GCCGGAGTCATCGCCGGCGC+CGG + chr4_1:72801549-72801568 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 72801261 72807564 72801261 ID=Msa0570600;Name=Msa0570600
chr4_1 mRNA 72801261 72807564 72801261 ID=Msa0570600-mRNA-1;Parent=Msa0570600;Name=Msa0570600-mRNA-1;_AED=0.07;_eAED=0.07;_QI=257|0.87|0.88|1|1|1|9|279|1012
chr4_1 exon 72801261 72802016 72801261 ID=Msa0570600-mRNA-1:exon:24957;Parent=Msa0570600-mRNA-1
chr4_1 exon 72802460 72802717 72802460 ID=Msa0570600-mRNA-1:exon:24956;Parent=Msa0570600-mRNA-1
chr4_1 exon 72802887 72803084 72802887 ID=Msa0570600-mRNA-1:exon:24955;Parent=Msa0570600-mRNA-1
chr4_1 exon 72803351 72803693 72803351 ID=Msa0570600-mRNA-1:exon:24954;Parent=Msa0570600-mRNA-1
chr4_1 exon 72803800 72803858 72803800 ID=Msa0570600-mRNA-1:exon:24953;Parent=Msa0570600-mRNA-1
chr4_1 exon 72804863 72805248 72804863 ID=Msa0570600-mRNA-1:exon:24952;Parent=Msa0570600-mRNA-1
chr4_1 exon 72805426 72805855 72805426 ID=Msa0570600-mRNA-1:exon:24951;Parent=Msa0570600-mRNA-1
chr4_1 exon 72806313 72806933 72806313 ID=Msa0570600-mRNA-1:exon:24950;Parent=Msa0570600-mRNA-1
chr4_1 exon 72807041 72807564 72807041 ID=Msa0570600-mRNA-1:exon:24949;Parent=Msa0570600-mRNA-1
chr4_1 five_prime_UTR 72807308 72807564 72807308 ID=Msa0570600-mRNA-1:five_prime_utr;Parent=Msa0570600-mRNA-1
chr4_1 CDS 72807041 72807307 72807041 ID=Msa0570600-mRNA-1:cds;Parent=Msa0570600-mRNA-1
chr4_1 CDS 72806313 72806933 72806313 ID=Msa0570600-mRNA-1:cds;Parent=Msa0570600-mRNA-1
chr4_1 CDS 72805426 72805855 72805426 ID=Msa0570600-mRNA-1:cds;Parent=Msa0570600-mRNA-1
chr4_1 CDS 72804863 72805248 72804863 ID=Msa0570600-mRNA-1:cds;Parent=Msa0570600-mRNA-1
chr4_1 CDS 72803800 72803858 72803800 ID=Msa0570600-mRNA-1:cds;Parent=Msa0570600-mRNA-1
chr4_1 CDS 72803351 72803693 72803351 ID=Msa0570600-mRNA-1:cds;Parent=Msa0570600-mRNA-1
chr4_1 CDS 72802887 72803084 72802887 ID=Msa0570600-mRNA-1:cds;Parent=Msa0570600-mRNA-1
chr4_1 CDS 72802460 72802717 72802460 ID=Msa0570600-mRNA-1:cds;Parent=Msa0570600-mRNA-1
chr4_1 CDS 72801540 72802016 72801540 ID=Msa0570600-mRNA-1:cds;Parent=Msa0570600-mRNA-1
chr4_1 three_prime_UTR 72801261 72801539 72801261 ID=Msa0570600-mRNA-1:three_prime_utr;Parent=Msa0570600-mRNA-1
Gene Sequence

>Msa0570600

ATGGCGCCGAGTATTCAACTAACTTCCACCGGCGCCGGCGATGACTCCGGCGATCTCGAAGATGTTCGCCTACTAGATTCCTACGATAAAAACGACGTCAACGACGACGGAACCAACCGGATTCAGGTCAGAATCACCGGCATGACCTGCGCCGCTTGCTCTAACTCCGTCGAAGCCGCTCTCATGTCCGTCGACGGTGTAATTCAAGCCTCCGTCGCTTTACTTCAAAACAAAGCCGACGTCGTTTTCAATAGAAACCTTGTCAAGGATGAAGATATTAAGAATGCAATTGAAGATGCAGGTTTTGAAGCTGAGATCTTACATGAACCTGTTTCAACCGGACTTAAACCGGTTGGAGATAGTACGGTGGTTGGACAGTTCACGATCGGCGGTATGACATGTGCGGCGTGTGTGAATTCCGTTGAAGGAATTTTAAACGACATCACCGGAGTAAAAAAAGCGGTGGTGGCTTTAGCTACTTCATTAGGTGAAGTTGAGTATGATCCAAACGTGATAAGCAAAGAAGATATTGTTATTGCAATTGAAGATGCAGGTTTTGAAGCTTCTTTTGTTCAGAGTACCAGTCAAGATGAGATTGTTTTAGGGGTTGTAGGCGTTTGTTCTTTGGTTGATGCAAGGGTTTTGGAAAGTATGCTTAGTGGTATGAAAGGGGTGAGGCAGTTTAGGTTTGATCCTTTGTTGAGTGAGCTTAATGTTGTTTTTGATCCTCAAGTTCTTAGTTCTAGATCGTTGGTTGATGAGATTCGCGTAGTTAGTAGTGACAAATATACTTTGCATGTTAGAAGCCCTTATGCGAGAATGGCTTCTAAAGATGGTTCAGAGAGTTCGTCTATGTTTCGGCTTTTTATTACCAGCTTGCTTCTTAGTATTCCCCTCTTCTTCATGGGGGTAATTTGTCCTCATATCCCATTCATATACTCGTTATTACTTTGGAGATGTGGGCCTTTCCTCATGGATGATTGGTTGAAGTGGGCATTGGTGAGTGTCATTCAATTTGGGATTGGAAAGCGCTTCTACATAGCAGCTTTCAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTTGTTGCTTTGGGAACTACAGCTTCATATGTTTATTCTGTTTGTGCTCTTCTGTATGGCGCTCTTACTGGATTTTGGTCTACAACATACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGAAAGTATTTGGAATGTCTTGCCAAGGGGAAGACATCTGATGCCATTAAGAAGCTAGTAGAACTCACTCCTGCAACAGCTTTATTGGTTGTTAAAGACAAAGATGGCAGACCTGTGGAAGAAAGAGAAATAGATTCCTTGCTTATTCAACCTAGTGACACATTAAAAGTTCTGCCTGGTACAAAGATTCCCGCTGATGGTATTGTTACCTGGGGCTCAAGTTATGTAAATGAGAGTATGGTGACTGGCGAGTCTATACCTGTTTCGAAGGAGATCAATGCATCTGTCATTGGAGGTACCATCAATTTGCATGGTGTCCTTCACATTAAAGCTACCAAAGTAGGATCCAATACAGTCTTGAGTCAGATAATTAATTTGGTCGAGACGGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAAGTATTGTGGCCGTGCTCTTGGATGGTTTTTATGTTCTGTTATTGTTAAATGATAGTGTAGCAAGCATATTTGTTCCTACAATTGTAGCTCTGTCATTATTGACACTATTGTGTTGGTATACTGCTGGGGCTCTTGGAGCATACCCAGATGAATGGCTGCCGAAAAATGGAAACCACTTTGTTTTTGCCCTTATGTTTTCTATATCTGTTGTGGTGATTGCATGCCCATGTGCACTTGGTTTGGCGACACCAACTGCTGTCATGGTGGCAACAGGTGTTGGGGCTAACAATGGTGTGTTAATTAAAGGAGGAGAATCCTTAGAAAGAGCTCAGATGGTGAAGTACGTTATATTTGATAAGACAGGAACTCTAACTCAGGGTAAAGCCACTGTCTCTGTTGCCAAGGTGTTTGCAGGAATGGACCGTGGAGAATTTCTTAAACTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCGCTGGCAAAAGCGATATTACAATATGCACGCCATTTTCACTTCTTTGATGAGTCCTCTCTTACCAATGGATCCCAAAATGATGCCAATGAATTAAAATCAGGGTGGCTTTATGATGCCTCAGACTTCTCTGCTATTCCAGGAAGGGGTGTGCAGTGCATTATAGACGGACAGCGTGTTTTGGTTGGTAACAGGAAGCTGCTGGTGGAAAGTGGCATAAGTATTTCTACTGAAGTGGAAAACTTTGTTGTAGAGCTTGAAGAAAGTGCCAAGACTGGGATCCTTGTAGCGTGCAATGGAGTATTGATTGGAGTCTTAGGGGTTGCAGACTCACTTAAGCGAGAAGCTTCTGTTGTTATAGAGGGCCTCCAGAAAATGGGAATCACGCCTGTAATGGTTACAGGAGATAACTGGAGAACTGCTCGAGCTGTTGCCAAGGAGGTTGGCATTCAAGATGTTAGGGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTGGTTCGTTCATTCCAAAAAGATGGTAGTATAGTTGCAATGGTGGGTGACGGTATAAATGATTCTCCTGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGAGCTGGGACAGATATTGCAATAGAAGCTGCTAATTATGTGTTGATGAGAGATAATTTGGAAGATGTAATCACAGCTATTGATCTTTCTAAGAAGACATTTTCTCGTATTCGATTGAATTATGTATTTGCCATGGCCTACAATATTATTGCCGTACCAGTTGCTGCCGGGGTTTTATTTCCTTCACTGGGAATCAAGCTTCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCATCTGTTAGTGTTGTATGTTCTTCTTTGCTTCTTAGAAGATATAGAAAACCAAGACTTACTACAATACTTGAAATAATTGTAAATTAA
Protein sequence

>Msa0570600

MAPSIQLTSTGAGDDSGDLEDVRLLDSYDKNDVNDDGTNRIQVRITGMTCAACSNSVEAALMSVDGVIQASVALLQNKADVVFNRNLVKDEDIKNAIEDAGFEAEILHEPVSTGLKPVGDSTVVGQFTIGGMTCAACVNSVEGILNDITGVKKAVVALATSLGEVEYDPNVISKEDIVIAIEDAGFEASFVQSTSQDEIVLGVVGVCSLVDARVLESMLSGMKGVRQFRFDPLLSELNVVFDPQVLSSRSLVDEIRVVSSDKYTLHVRSPYARMASKDGSESSSMFRLFITSLLLSIPLFFMGVICPHIPFIYSLLLWRCGPFLMDDWLKWALVSVIQFGIGKRFYIAAFRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSTTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVVKDKDGRPVEEREIDSLLIQPSDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESIPVSKEINASVIGGTINLHGVLHIKATKVGSNTVLSQIINLVETAQMSKAPIQKFADYVSIVAVLLDGFYVLLLLNDSVASIFVPTIVALSLLTLLCWYTAGALGAYPDEWLPKNGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGESLERAQMVKYVIFDKTGTLTQGKATVSVAKVFAGMDRGEFLKLVASAEASSEHPLAKAILQYARHFHFFDESSLTNGSQNDANELKSGWLYDASDFSAIPGRGVQCIIDGQRVLVGNRKLLVESGISISTEVENFVVELEESAKTGILVACNGVLIGVLGVADSLKREASVVIEGLQKMGITPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAANYVLMRDNLEDVITAIDLSKKTFSRIRLNYVFAMAYNIIAVPVAAGVLFPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPRLTTILEIIVN*