Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987560 | XP_013452022.1 | 97.949 | 195 | 4 | 0 | 1 | 195 | 1 | 195 | 2.18e-140 | 399 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987560 | G7IEW6 | 97.949 | 195 | 4 | 0 | 1 | 195 | 1 | 195 | 1.04e-140 | 399 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0106370 | Msa0987560 | 0.810754 | 9.849404e-51 | -8.615850e-47 |
| Msa0607540 | Msa0987560 | -0.824579 | 7.477236e-54 | -8.615850e-47 |
| Msa0608620 | Msa0987560 | -0.802021 | 6.836070e-49 | -8.615850e-47 |
| Msa0647830 | Msa0987560 | -0.806341 | 8.622504e-50 | -8.615850e-47 |
| Msa0661190 | Msa0987560 | 0.820238 | 7.624062e-53 | -8.615850e-47 |
| Msa0744170 | Msa0987560 | 0.807617 | 4.631956e-50 | -8.615850e-47 |
| Msa0806090 | Msa0987560 | -0.814804 | 1.278400e-51 | -8.615850e-47 |
| Msa0825240 | Msa0987560 | 0.823326 | 1.471223e-53 | -8.615850e-47 |
| Msa0135820 | Msa0987560 | -0.801022 | 1.095279e-48 | -8.615850e-47 |
| Msa0373930 | Msa0987560 | -0.800138 | 1.658748e-48 | -8.615850e-47 |
| Msa0987560 | Msa0990960 | -0.800926 | 1.145825e-48 | -8.615850e-47 |
| Msa0987560 | Msa1075080 | 0.806656 | 7.400098e-50 | -8.615850e-47 |
| Msa0987560 | Msa1075220 | 0.829487 | 5.007916e-55 | -8.615850e-47 |
| Msa0987560 | Msa1116130 | 0.805816 | 1.112183e-49 | -8.615850e-47 |
| Msa0987560 | Msa1121450 | 0.808546 | 2.936731e-50 | -8.615850e-47 |
| Msa0987560 | Msa1124540 | 0.804421 | 2.177389e-49 | -8.615850e-47 |
| Msa0987560 | Msa1139000 | 0.800460 | 1.426104e-48 | -8.615850e-47 |
| Msa0987560 | Msa1162550 | 0.800903 | 1.158701e-48 | -8.615850e-47 |
| Msa0987560 | Msa1167220 | -0.800138 | 1.658748e-48 | -8.615850e-47 |
| Msa0987560 | Msa1241130 | 0.804340 | 2.264614e-49 | -8.615850e-47 |
| Msa0987560 | Msa1282580 | 0.809345 | 1.981460e-50 | -8.615850e-47 |
| Msa0987560 | Msa1357530 | -0.802028 | 6.811662e-49 | -8.615850e-47 |
| Msa0987560 | Msa1394540 | -0.810059 | 1.391490e-50 | -8.615850e-47 |
| Msa0987560 | Msa1449250 | 0.801308 | 9.572874e-49 | -8.615850e-47 |
| Msa0987560 | Msa1451620 | 0.839708 | 1.348343e-57 | -8.615850e-47 |
| Msa0987560 | Msa1454910 | 0.815699 | 8.087185e-52 | -8.615850e-47 |
| Msa0260950 | Msa0987560 | 0.802552 | 5.313572e-49 | -8.615850e-47 |
| Msa0532790 | Msa0987560 | 0.800780 | 1.227200e-48 | -8.615850e-47 |
| Msa0548280 | Msa0987560 | 0.827152 | 1.831705e-54 | -8.615850e-47 |
| Msa0553460 | Msa0987560 | -0.808327 | 3.270645e-50 | -8.615850e-47 |
| Msa0555020 | Msa0987560 | -0.805174 | 1.516462e-49 | -8.615850e-47 |
| Msa0564510 | Msa0987560 | -0.820774 | 5.741823e-53 | -8.615850e-47 |
| Msa0585000 | Msa0987560 | 0.830758 | 2.452108e-55 | -8.615850e-47 |
| Msa0876850 | Msa0987560 | 0.804595 | 2.003057e-49 | -8.615850e-47 |
| Msa0886330 | Msa0987560 | 0.818163 | 2.261847e-52 | -8.615850e-47 |
| Msa0913480 | Msa0987560 | 0.821706 | 3.500572e-53 | -8.615850e-47 |
| Msa0942080 | Msa0987560 | 0.842330 | 2.762290e-58 | -8.615850e-47 |
| Msa0962190 | Msa0987560 | 0.832993 | 6.881396e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987560 | MtrunA17_Chr6g0467101 | 97.949 | 195 | 4 | 0 | 1 | 195 | 1 | 195 | 2.01e-144 | 399 |
| Msa0987560 | MtrunA17_Chr1g0201541 | 63.333 | 210 | 59 | 3 | 1 | 195 | 1 | 207 | 1.22e-87 | 256 |
| Msa0987560 | MtrunA17_Chr8g0383401 | 51.185 | 211 | 80 | 6 | 1 | 195 | 1 | 204 | 1.93e-61 | 190 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987560 | AT4G09830.1 | 60.606 | 198 | 68 | 3 | 1 | 195 | 1 | 191 | 4.03e-71 | 214 |
| Msa0987560 | AT5G64780.1 | 47.514 | 181 | 82 | 3 | 1 | 178 | 1 | 171 | 9.15e-46 | 149 |
Find 79 sgRNAs with CRISPR-Local
Find 428 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTGGATTTGCTTGCTCTT+TGG | 0.200161 | 6_4:-38281078 | Msa0987560:three_prime_UTR |
| AATCTTCAGCTTTATCAAAT+TGG | 0.213955 | 6_4:-38281293 | Msa0987560:CDS |
| CCAGTCACTTCAGGAACTTC+TGG | 0.246666 | 6_4:-38281419 | Msa0987560:CDS |
| ATCCATGGCAGAATCGTTAT+TGG | 0.290371 | 6_4:+38281211 | None:intergenic |
| TCAGTCTTTCCAGTCACTTC+AGG | 0.305417 | 6_4:-38281428 | Msa0987560:CDS |
| CTAGTCCTATTCTTGTCTAT+TGG | 0.309010 | 6_4:-38281177 | Msa0987560:exon |
| TTTGAAAACACCGAGTTCTT+TGG | 0.310535 | 6_4:+38281341 | None:intergenic |
| GTGGACAAATACAGATTTAC+AGG | 0.318674 | 6_4:+38280900 | None:intergenic |
| CGTTTCTTCGCCATTGGAAT+CGG | 0.347027 | 6_4:+38287211 | None:intergenic |
| AGCTGAAGATTTCGACGAAC+AGG | 0.349902 | 6_4:+38281305 | None:intergenic |
| GCCCGGCCCCAGCTATTGTT+TGG | 0.350708 | 6_4:+38281396 | None:intergenic |
| AACCATCACAATTCCTTGTC+TGG | 0.363764 | 6_4:-38281095 | Msa0987560:three_prime_UTR |
| TGATGTAGTTAACTACATTC+AGG | 0.382450 | 6_4:-38284423 | Msa0987560:intron |
| GACTTACGTTTCTTCGCCAT+TGG | 0.395315 | 6_4:+38287205 | None:intergenic |
| AGAAAGCTTCTGATGATTCA+TGG | 0.396363 | 6_4:+38287093 | None:intergenic |
| GTATCATTGGCTGTGGCTGC+TGG | 0.397241 | 6_4:+38281462 | None:intergenic |
| AATGAGGGTTGTTGTTGATT+CGG | 0.397849 | 6_4:+38287257 | None:intergenic |
| TTGTATTCTAAATTTCTTCA+AGG | 0.419257 | 6_4:-38280808 | Msa0987560:three_prime_UTR |
| CAAGGAATTGTGATGGTTGT+TGG | 0.420570 | 6_4:+38281100 | None:intergenic |
| ACTTCTGGCCAAACAATAGC+TGG | 0.421636 | 6_4:-38281404 | Msa0987560:CDS |
| GTCCACAGATTCTATCCATA+TGG | 0.424399 | 6_4:-38280883 | Msa0987560:three_prime_UTR |
| ACAAACCAATAGACAAGAAT+AGG | 0.435250 | 6_4:+38281172 | None:intergenic |
| CAGAAGGAGTTAGATTATTG+TGG | 0.452182 | 6_4:-38281524 | Msa0987560:CDS |
| GGCCAAACAATAGCTGGGGC+CGG | 0.453630 | 6_4:-38281398 | Msa0987560:CDS |
| TGTATTCTAAATTTCTTCAA+GGG | 0.468630 | 6_4:-38280807 | Msa0987560:three_prime_UTR |
| CGGTGGTGGATGGAGGAATG+AGG | 0.471918 | 6_4:+38287241 | None:intergenic |
| GCCAAACAATAGCTGGGGCC+GGG | 0.486665 | 6_4:-38281397 | Msa0987560:CDS |
| AACAACTGTAAATCGCCATA+TGG | 0.493019 | 6_4:+38280868 | None:intergenic |
| AGAATTAGCAGCGGTGGAGA+AGG | 0.493812 | 6_4:+38287138 | None:intergenic |
| CGGCGGAGATCGGTGGTGGA+TGG | 0.497980 | 6_4:+38287231 | None:intergenic |
| CCATTGGAATCGGCGGAGAT+CGG | 0.499729 | 6_4:+38287221 | None:intergenic |
| ACAATAGCTGGGGCCGGGCA+AGG | 0.510273 | 6_4:-38281392 | Msa0987560:CDS |
| CGGAGATCGGTGGTGGATGG+AGG | 0.516588 | 6_4:+38287234 | None:intergenic |
| GCTTACGTCGACCAAGCGAT+TGG | 0.516697 | 6_4:-38281013 | Msa0987560:three_prime_UTR |
| GAATCGGCGGAGATCGGTGG+TGG | 0.522126 | 6_4:+38287227 | None:intergenic |
| AAGACTCCAAACCAATCGCT+TGG | 0.531726 | 6_4:+38281002 | None:intergenic |
| CCAGAAGTTCCTGAAGTGAC+TGG | 0.532351 | 6_4:+38281419 | None:intergenic |
| AGAAAGAGAATTAGCAGCGG+TGG | 0.534056 | 6_4:+38287132 | None:intergenic |
| AGTGACTGGAAAGACTGAAC+TGG | 0.534939 | 6_4:+38281433 | None:intergenic |
| GGTGGTGGATGGAGGAATGA+GGG | 0.535280 | 6_4:+38287242 | None:intergenic |
| CAGTGGCGCTCTGGGTGACA+TGG | 0.538079 | 6_4:+38281490 | None:intergenic |
| CAGCTTTATCAAATTGGTGA+GGG | 0.538099 | 6_4:-38281287 | Msa0987560:CDS |
| CCGATCTCCGCCGATTCCAA+TGG | 0.539060 | 6_4:-38287221 | Msa0987560:exon |
| CGCCATATGGATAGAATCTG+TGG | 0.540015 | 6_4:+38280881 | None:intergenic |
| AACAAGAAGAAGGAGGGTCG+AGG | 0.541006 | 6_4:-38284457 | Msa0987560:CDS |
| ATCGGAGCGTAGTCCTTGCC+CGG | 0.541129 | 6_4:+38281379 | None:intergenic |
| AAGCAACCCCTGAAATCTAA+AGG | 0.541219 | 6_4:+38280938 | None:intergenic |
| GAACTGGTGACAGGTATCAT+TGG | 0.541710 | 6_4:+38281449 | None:intergenic |
| CTTCTGGCCAAACAATAGCT+GGG | 0.543316 | 6_4:-38281403 | Msa0987560:CDS |
| CTTTATCAAATTGGTGAGGG+TGG | 0.546767 | 6_4:-38281284 | Msa0987560:CDS |
| GGGGAGATTATGGAAAGAGA+GGG | 0.550825 | 6_4:+38287288 | None:intergenic |
| GGAAAGACTGAACTGGTGAC+AGG | 0.556654 | 6_4:+38281440 | None:intergenic |
| GGTGGAGAAGGAAGCATACA+TGG | 0.562243 | 6_4:+38287150 | None:intergenic |
| TTCCAATAACGATTCTGCCA+TGG | 0.570860 | 6_4:-38281213 | Msa0987560:CDS |
| ATCGTGCAAGAAATGATAAG+AGG | 0.572706 | 6_4:-38281055 | Msa0987560:three_prime_UTR |
| GTATTCTAAATTTCTTCAAG+GGG | 0.572902 | 6_4:-38280806 | Msa0987560:three_prime_UTR |
| GCTGAAGATTTCGACGAACA+GGG | 0.582791 | 6_4:+38281306 | None:intergenic |
| CTAGTCTGCATGCATATCCA+TGG | 0.585175 | 6_4:+38281196 | None:intergenic |
| TCAGCTTTATCAAATTGGTG+AGG | 0.587468 | 6_4:-38281288 | Msa0987560:CDS |
| CAAGTCTCGACGAAGTCGAT+CGG | 0.588474 | 6_4:-38287174 | Msa0987560:CDS |
| GTGACAGGTATCATTGGCTG+TGG | 0.588517 | 6_4:+38281455 | None:intergenic |
| TGAAAATCAGCCAAAGAACT+CGG | 0.589877 | 6_4:-38281351 | Msa0987560:CDS |
| TTGGAATCGGCGGAGATCGG+TGG | 0.591812 | 6_4:+38287224 | None:intergenic |
| TTCTTCGCCATTGGAATCGG+CGG | 0.597410 | 6_4:+38287214 | None:intergenic |
| TGGATTTGGAAACAAGAAGA+AGG | 0.601954 | 6_4:-38284467 | Msa0987560:CDS |
| TTTGAACCTTTAGATTTCAG+GGG | 0.621957 | 6_4:-38280944 | Msa0987560:three_prime_UTR |
| TGGACAAATACAGATTTACA+GGG | 0.622606 | 6_4:+38280901 | None:intergenic |
| ATCCAGACAAGGAATTGTGA+TGG | 0.628373 | 6_4:+38281093 | None:intergenic |
| TCGTGCAAGAAATGATAAGA+GGG | 0.629564 | 6_4:-38281054 | Msa0987560:three_prime_UTR |
| ACAAGAAGAAGGAGGGTCGA+GGG | 0.630981 | 6_4:-38284456 | Msa0987560:CDS |
| TATTCTAAATTTCTTCAAGG+GGG | 0.633432 | 6_4:-38280805 | Msa0987560:three_prime_UTR |
| TTCTGGCCAAACAATAGCTG+GGG | 0.648372 | 6_4:-38281402 | Msa0987560:CDS |
| TTTGGAAACAAGAAGAAGGA+GGG | 0.660375 | 6_4:-38284463 | Msa0987560:CDS |
| ATTTGGAAACAAGAAGAAGG+AGG | 0.667699 | 6_4:-38284464 | Msa0987560:CDS |
| GACTTCGTCGAGACTTGACG+CGG | 0.668540 | 6_4:+38287180 | None:intergenic |
| CGATTTACAGTTGTTGACGC+CGG | 0.668661 | 6_4:-38280860 | Msa0987560:three_prime_UTR |
| AGAGCAAGCAAATCCAGACA+AGG | 0.684257 | 6_4:+38281082 | None:intergenic |
| CTGAGAAAGAGAATTAGCAG+CGG | 0.709453 | 6_4:+38287129 | None:intergenic |
| GGACAAATACAGATTTACAG+GGG | 0.772579 | 6_4:+38280902 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+AGG | + | chr6_4:38286025-38286044 | None:intergenic | 0.0% |
| !!! | TTTGATGATATTTTTTTTTT+TGG | - | chr6_4:38281840-38281859 | Msa0987560:intron | 10.0% |
| !! | AATATATTAAAAATGAAACA+TGG | + | chr6_4:38284190-38284209 | None:intergenic | 10.0% |
| !! | AACAATTAAAAAAGAAATAA+GGG | + | chr6_4:38284856-38284875 | None:intergenic | 10.0% |
| !! | AAACAATTAAAAAAGAAATA+AGG | + | chr6_4:38284857-38284876 | None:intergenic | 10.0% |
| !! | GAAAATGAAATAATTATATT+TGG | - | chr6_4:38284975-38284994 | Msa0987560:intron | 10.0% |
| !! | AAATGAAATAATTATATTTG+GGG | - | chr6_4:38284977-38284996 | Msa0987560:intron | 10.0% |
| !!! | TATTTTTAACAAAAAAAAAC+AGG | + | chr6_4:38285024-38285043 | None:intergenic | 10.0% |
| !!! | AATTTTTATTTAGTTGTGTT+TGG | - | chr6_4:38281012-38281031 | Msa0987560:three_prime_UTR | 15.0% |
| !!! | AAATGTTGTTTTTGTTTTTA+AGG | - | chr6_4:38281055-38281074 | Msa0987560:three_prime_UTR | 15.0% |
| !!! | TGTTGTTTTTAAGTTTAATT+TGG | - | chr6_4:38281277-38281296 | Msa0987560:CDS | 15.0% |
| !! | ATAAAATCAAATACAACTAA+GGG | + | chr6_4:38281431-38281450 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTAACTTTGATTT+TGG | - | chr6_4:38281488-38281507 | Msa0987560:CDS | 15.0% |
| !!! | TTTTGTTACAATTTATTCTT+TGG | - | chr6_4:38282730-38282749 | Msa0987560:intron | 15.0% |
| !! | TTTGTTACAATTTATTCTTT+GGG | - | chr6_4:38282731-38282750 | Msa0987560:intron | 15.0% |
| !!! | GTATTGATAATTTATTAATG+TGG | - | chr6_4:38283457-38283476 | Msa0987560:intron | 15.0% |
| !!! | GTTATATTTGTAAATTTGTT+GGG | - | chr6_4:38283917-38283936 | Msa0987560:intron | 15.0% |
| !! | TTAATATATTATACAACATG+TGG | - | chr6_4:38284200-38284219 | Msa0987560:intron | 15.0% |
| !! | TAAAATGCAAATATAAAAGT+AGG | + | chr6_4:38284435-38284454 | None:intergenic | 15.0% |
| !!! | TATTTGCATTTTAAAATTGA+TGG | - | chr6_4:38284442-38284461 | Msa0987560:CDS | 15.0% |
| !!! | TCATTTTCTATTTAATAAAG+CGG | + | chr6_4:38284963-38284982 | None:intergenic | 15.0% |
| !!! | AATAATTTTTGTAGTTTGTT+TGG | - | chr6_4:38285040-38285059 | Msa0987560:intron | 15.0% |
| !! | TCTTAGAAAATAACTATTAA+GGG | - | chr6_4:38285978-38285997 | Msa0987560:intron | 15.0% |
| !! | TATTCATAATCATAACAATA+AGG | + | chr6_4:38286081-38286100 | None:intergenic | 15.0% |
| !! | CATATTTATAAGAGATATTT+GGG | + | chr6_4:38286239-38286258 | None:intergenic | 15.0% |
| !! | TCATATTTATAAGAGATATT+TGG | + | chr6_4:38286240-38286259 | None:intergenic | 15.0% |
| !!! | TTTTATACATGTATTTACTT+AGG | + | chr6_4:38286420-38286439 | None:intergenic | 15.0% |
| !!! | TAAGTTTAATTTGGTGTTTA+TGG | - | chr6_4:38281286-38281305 | Msa0987560:CDS | 20.0% |
| !! | TAAAATCAAATACAACTAAG+GGG | + | chr6_4:38281430-38281449 | None:intergenic | 20.0% |
| !! | CATAAAATCAAATACAACTA+AGG | + | chr6_4:38281432-38281451 | None:intergenic | 20.0% |
| !!! | AAGTTTGATTTTGATGTTTA+TGG | - | chr6_4:38281596-38281615 | Msa0987560:intron | 20.0% |
| !!! | ACAAACACAACATTTTATTA+GGG | + | chr6_4:38281636-38281655 | None:intergenic | 20.0% |
| !!! | TACAAACACAACATTTTATT+AGG | + | chr6_4:38281637-38281656 | None:intergenic | 20.0% |
| !!! | TTGGTAATATTGAAATTGTT+AGG | - | chr6_4:38281670-38281689 | Msa0987560:intron | 20.0% |
| !!! | TTTATTGTGATTTTTTGTTC+AGG | - | chr6_4:38281867-38281886 | Msa0987560:intron | 20.0% |
| !! | TAAAGTTAAAACAAGTAACA+TGG | + | chr6_4:38282178-38282197 | None:intergenic | 20.0% |
| !! | TAACTTTACTTTAGTGTTTA+TGG | - | chr6_4:38282190-38282209 | Msa0987560:intron | 20.0% |
| !! | TATAACCATAAAATCAACAA+GGG | + | chr6_4:38282480-38282499 | None:intergenic | 20.0% |
| !! | TTATAACCATAAAATCAACA+AGG | + | chr6_4:38282481-38282500 | None:intergenic | 20.0% |
| !!! | TTTTATGGTTATAATGTTGT+TGG | - | chr6_4:38282487-38282506 | Msa0987560:intron | 20.0% |
| !! | TGCTAAATATCAAAATTGTT+AGG | - | chr6_4:38282549-38282568 | Msa0987560:intron | 20.0% |
| !!! | AATATTTTATGTGGATACTT+GGG | - | chr6_4:38282575-38282594 | Msa0987560:intron | 20.0% |
| !! | TAAACAAAACAAAAACTTGA+AGG | + | chr6_4:38282799-38282818 | None:intergenic | 20.0% |
| !!! | GATTTTTTGTTAAAAAGTAC+CGG | - | chr6_4:38282997-38283016 | Msa0987560:intron | 20.0% |
| !! | TAAAAAATGATGTCAGATAT+CGG | - | chr6_4:38283162-38283181 | Msa0987560:intron | 20.0% |
| !!! | CTTTTTAAATGCTTTAATCT+AGG | - | chr6_4:38283404-38283423 | Msa0987560:intron | 20.0% |
| !! | GGTTATATTTGTAAATTTGT+TGG | - | chr6_4:38283916-38283935 | Msa0987560:intron | 20.0% |
| !!! | ATGTTGAAAGGTTTTTATAT+TGG | - | chr6_4:38284100-38284119 | Msa0987560:intron | 20.0% |
| !!! | TGTTGAAAGGTTTTTATATT+GGG | - | chr6_4:38284101-38284120 | Msa0987560:intron | 20.0% |
| !!! | TTGGTATGTTGAATATTTTT+AGG | - | chr6_4:38284387-38284406 | Msa0987560:intron | 20.0% |
| !!! | TTTAAAATTGATGGTATGAA+TGG | - | chr6_4:38284451-38284470 | Msa0987560:CDS | 20.0% |
| !!! | TCCATTTCTTCTTATTTTTT+AGG | - | chr6_4:38284581-38284600 | Msa0987560:intron | 20.0% |
| !!! | TCAAAAAATTAGTTTGAGTT+GGG | - | chr6_4:38284768-38284787 | Msa0987560:intron | 20.0% |
| !! | GAATACATATTTGAATTTGA+AGG | + | chr6_4:38284929-38284948 | None:intergenic | 20.0% |
| !! | AAATATGTATTCCTATTGTT+TGG | - | chr6_4:38284937-38284956 | Msa0987560:intron | 20.0% |
| !!! | AATAATTATATTTGGGGTTT+TGG | - | chr6_4:38284983-38285002 | Msa0987560:intron | 20.0% |
| !! | AATTATTGATCGATACATTT+AGG | - | chr6_4:38285354-38285373 | Msa0987560:intron | 20.0% |
| !!! | TTTAGGATACTTCAATATTT+TGG | - | chr6_4:38285371-38285390 | Msa0987560:intron | 20.0% |
| !!! | TTAGGATACTTCAATATTTT+GGG | - | chr6_4:38285372-38285391 | Msa0987560:intron | 20.0% |
| !!! | TAATAGTTATTTTCTAAGAG+AGG | + | chr6_4:38285977-38285996 | None:intergenic | 20.0% |
| !! | CTCTTAGAAAATAACTATTA+AGG | - | chr6_4:38285977-38285996 | Msa0987560:intron | 20.0% |
| !! | CTTAGAAAATAACTATTAAG+GGG | - | chr6_4:38285979-38285998 | Msa0987560:intron | 20.0% |
| !! | TTAGAAAATAACTATTAAGG+GGG | - | chr6_4:38285980-38285999 | Msa0987560:intron | 20.0% |
| !! | TATATAACTATATCTACAGA+TGG | + | chr6_4:38286125-38286144 | None:intergenic | 20.0% |
| !! | ATATCTCTTATAAATATGAC+CGG | - | chr6_4:38286241-38286260 | Msa0987560:intron | 20.0% |
| !! | ATTTATATTAATACTTCCTC+CGG | + | chr6_4:38286263-38286282 | None:intergenic | 20.0% |
| !!! | AGATGCTTAATATATGATTT+TGG | - | chr6_4:38286392-38286411 | Msa0987560:intron | 20.0% |
| !! | AGGTCAGATAAAAAATTTAA+TGG | + | chr6_4:38286835-38286854 | None:intergenic | 20.0% |
| !! | TTGTATTCTAAATTTCTTCA+AGG | - | chr6_4:38287173-38287192 | Msa0987560:CDS | 20.0% |
| !! | TGTATTCTAAATTTCTTCAA+GGG | - | chr6_4:38287174-38287193 | Msa0987560:CDS | 20.0% |
| !!! | CTTGTACTTTTTAACATTAA+GGG | - | chr6_4:38287213-38287232 | Msa0987560:exon | 20.0% |
| ! | ATTAGTGTAATTATATGCGT+CGG | + | chr6_4:38281191-38281210 | None:intergenic | 25.0% |
| ! | CTGACAATATCAAAATTGTT+AGG | - | chr6_4:38281363-38281382 | Msa0987560:CDS | 25.0% |
| ! | AAAATCAAATACAACTAAGG+GGG | + | chr6_4:38281429-38281448 | None:intergenic | 25.0% |
| !!! | AGTTGTATTTGATTTTATGC+AGG | - | chr6_4:38281433-38281452 | Msa0987560:CDS | 25.0% |
| ! | AATCAGACATAAGAAAATAG+TGG | + | chr6_4:38282146-38282165 | None:intergenic | 25.0% |
| ! | GAATACTAGAATTGTTAGAA+CGG | - | chr6_4:38282271-38282290 | Msa0987560:intron | 25.0% |
| !!! | ATTTTCCCTTGTTGATTTTA+TGG | - | chr6_4:38282472-38282491 | Msa0987560:intron | 25.0% |
| !! | GAATATTTTATGTGGATACT+TGG | - | chr6_4:38282574-38282593 | Msa0987560:intron | 25.0% |
| ! | CTGAAAACTCATAAATACAA+CGG | + | chr6_4:38282619-38282638 | None:intergenic | 25.0% |
| ! | CAAAACAATGTTTGATTAAG+TGG | + | chr6_4:38282369-38282388 | None:intergenic | 25.0% |
| !!! | TTGTTGTTTAAGTTTGATCT+TGG | - | chr6_4:38282833-38282852 | Msa0987560:intron | 25.0% |
| !!! | AAGTTTGATCTTGGTTTTTT+TGG | - | chr6_4:38282842-38282861 | Msa0987560:intron | 25.0% |
| !!! | TTTTTTGGTTGTAATGTTGT+TGG | - | chr6_4:38282857-38282876 | Msa0987560:intron | 25.0% |
| ! | TTGTACTGAATAATGTATTG+AGG | + | chr6_4:38283057-38283076 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+TGG | - | chr6_4:38283072-38283091 | Msa0987560:intron | 25.0% |
| ! | GTTAAAATTCAACTATGCAA+TGG | + | chr6_4:38283207-38283226 | None:intergenic | 25.0% |
| !! | AAAAACTTTATCAGTGGATT+TGG | - | chr6_4:38283500-38283519 | Msa0987560:intron | 25.0% |
| ! | AAAACATATACGTATAGTAC+TGG | - | chr6_4:38283671-38283690 | Msa0987560:intron | 25.0% |
| ! | GCAACAAAGGATTTAAATTA+TGG | - | chr6_4:38283765-38283784 | Msa0987560:intron | 25.0% |
| ! | AAAGGATTTAAATTATGGCA+AGG | - | chr6_4:38283770-38283789 | Msa0987560:intron | 25.0% |
| ! | ATTTAAATTATGGCAAGGAA+GGG | - | chr6_4:38283775-38283794 | Msa0987560:intron | 25.0% |
| !!! | GTAAATTTGTTGGGAATATT+TGG | - | chr6_4:38283926-38283945 | Msa0987560:intron | 25.0% |
| ! | AAAATACTACACAGAATAAC+AGG | + | chr6_4:38284071-38284090 | None:intergenic | 25.0% |
| ! | TTTGATTGATTGATGTTGAA+AGG | - | chr6_4:38284088-38284107 | Msa0987560:intron | 25.0% |
| !! | TTTTGTCAACACGATTATTT+TGG | - | chr6_4:38284255-38284274 | Msa0987560:intron | 25.0% |
| ! | GCCTAAAAAATAAGAAGAAA+TGG | + | chr6_4:38284585-38284604 | None:intergenic | 25.0% |
| !! | GTCAAAAAATTAGTTTGAGT+TGG | - | chr6_4:38284767-38284786 | Msa0987560:intron | 25.0% |
| !!! | CAAAAAATTAGTTTGAGTTG+GGG | - | chr6_4:38284769-38284788 | Msa0987560:intron | 25.0% |
| ! | AAAAAATATACAGAAACAGC+TGG | + | chr6_4:38284898-38284917 | None:intergenic | 25.0% |
| ! | TTAACAAAAAAAAACAGGCA+GGG | + | chr6_4:38285019-38285038 | None:intergenic | 25.0% |
| ! | TTTAACAAAAAAAAACAGGC+AGG | + | chr6_4:38285020-38285039 | None:intergenic | 25.0% |
| ! | AAATAATAGTAACAATCCCA+TGG | + | chr6_4:38285202-38285221 | None:intergenic | 25.0% |
| !! | CAATTTTCCATTTAGCTATA+TGG | - | chr6_4:38285223-38285242 | Msa0987560:intron | 25.0% |
| !! | ATGATTTACTCCATCAATTT+TGG | + | chr6_4:38285264-38285283 | None:intergenic | 25.0% |
| !! | TAGGATACTTCAATATTTTG+GGG | - | chr6_4:38285373-38285392 | Msa0987560:intron | 25.0% |
| !!! | CAATGATCATTTTCTAGAAT+TGG | - | chr6_4:38285557-38285576 | Msa0987560:intron | 25.0% |
| ! | TATCAAATGTAATCAAATCC+TGG | + | chr6_4:38285932-38285951 | None:intergenic | 25.0% |
| !! | TCAATAACAGTTGATGTATT+TGG | + | chr6_4:38286216-38286235 | None:intergenic | 25.0% |
| ! | AATAATCATATCAAGCATCT+AGG | - | chr6_4:38286280-38286299 | Msa0987560:intron | 25.0% |
| ! | TGCATTGTTAAACAAATAAG+AGG | - | chr6_4:38286332-38286351 | Msa0987560:intron | 25.0% |
| ! | GCATTGTTAAACAAATAAGA+GGG | - | chr6_4:38286333-38286352 | Msa0987560:intron | 25.0% |
| !! | AATCTTCAGCTTTATCAAAT+TGG | - | chr6_4:38286688-38286707 | Msa0987560:intron | 25.0% |
| !! | ATTTTGAACCTTTAGATTTC+AGG | - | chr6_4:38287035-38287054 | Msa0987560:intron | 25.0% |
| !! | TTTTGAACCTTTAGATTTCA+GGG | - | chr6_4:38287036-38287055 | Msa0987560:intron | 25.0% |
| ! | AAAAAAACAAAGAGCAAAAC+CGG | + | chr6_4:38287143-38287162 | None:intergenic | 25.0% |
| ! | GTATTCTAAATTTCTTCAAG+GGG | - | chr6_4:38287175-38287194 | Msa0987560:CDS | 25.0% |
| ! | TATTCTAAATTTCTTCAAGG+GGG | - | chr6_4:38287176-38287195 | Msa0987560:CDS | 25.0% |
| !!! | GCTTGTACTTTTTAACATTA+AGG | - | chr6_4:38287212-38287231 | Msa0987560:exon | 25.0% |
| GTTTATGGTTGTAATGTTGT+TGG | - | chr6_4:38281301-38281320 | Msa0987560:CDS | 30.0% | |
| !!! | AACGTTTTTTCGTGTTTACT+CGG | - | chr6_4:38281389-38281408 | Msa0987560:CDS | 30.0% |
| TCAATATTACCAATTGAGCT+TGG | + | chr6_4:38281663-38281682 | None:intergenic | 30.0% | |
| GATTAAGCATGTTCGAATTT+CGG | - | chr6_4:38281708-38281727 | Msa0987560:intron | 30.0% | |
| ATTAAGCATGTTCGAATTTC+GGG | - | chr6_4:38281709-38281728 | Msa0987560:intron | 30.0% | |
| TTGTTAAATAGCAGCTATAG+CGG | - | chr6_4:38281894-38281913 | Msa0987560:intron | 30.0% | |
| TAGTGTTTCACAATGTTGAT+GGG | + | chr6_4:38281994-38282013 | None:intergenic | 30.0% | |
| ATAGTGTTTCACAATGTTGA+TGG | + | chr6_4:38281995-38282014 | None:intergenic | 30.0% | |
| TACAGAATATTGTCAGATAG+CGG | - | chr6_4:38282075-38282094 | Msa0987560:intron | 30.0% | |
| GTTTATGGTTGTAATGTTGT+TGG | - | chr6_4:38281301-38281320 | Msa0987560:CDS | 30.0% | |
| CTAGTATTCAAAGTTAAGCT+AGG | + | chr6_4:38282260-38282279 | None:intergenic | 30.0% | |
| AAAACTCTTCTCAACAACAT+GGG | + | chr6_4:38282407-38282426 | None:intergenic | 30.0% | |
| AAAAACTCTTCTCAACAACA+TGG | + | chr6_4:38282408-38282427 | None:intergenic | 30.0% | |
| ! | ATGTTGTTGAGAAGAGTTTT+TGG | - | chr6_4:38282407-38282426 | Msa0987560:intron | 30.0% |
| ! | GTTAGGCTGAATATTTTATG+TGG | - | chr6_4:38282566-38282585 | Msa0987560:intron | 30.0% |
| ! | CGTTGTATTTATGAGTTTTC+AGG | - | chr6_4:38282617-38282636 | Msa0987560:intron | 30.0% |
| !! | TGTATTTATGAGTTTTCAGG+CGG | - | chr6_4:38282620-38282639 | Msa0987560:intron | 30.0% |
| GTTACAATTTATTCTTTGGG+TGG | - | chr6_4:38282734-38282753 | Msa0987560:intron | 30.0% | |
| ATTGTTAGACCTAATGTTGT+TGG | - | chr6_4:38282932-38282951 | Msa0987560:intron | 30.0% | |
| CAAAATCAGCTATGAAATAG+TGG | + | chr6_4:38283107-38283126 | None:intergenic | 30.0% | |
| AAAATTCAACTATGCAATGG+TGG | + | chr6_4:38283204-38283223 | None:intergenic | 30.0% | |
| ! | TATCTGCAATTGATGACATT+AGG | - | chr6_4:38283244-38283263 | Msa0987560:intron | 30.0% |
| ! | ATTAGGATTGATTCTTTCGA+TGG | - | chr6_4:38283261-38283280 | Msa0987560:intron | 30.0% |
| !! | TAGACAAGAACAATTTGTTG+AGG | - | chr6_4:38283360-38283379 | Msa0987560:intron | 30.0% |
| TGGAATGTTCTAATGATATC+AGG | - | chr6_4:38283477-38283496 | Msa0987560:intron | 30.0% | |
| ATCAGGAAAAACTTTATCAG+TGG | - | chr6_4:38283494-38283513 | Msa0987560:intron | 30.0% | |
| TGATGTAGTTAACTACATTC+AGG | - | chr6_4:38283558-38283577 | Msa0987560:intron | 30.0% | |
| CACAATCAATGAAACATTTG+CGG | - | chr6_4:38283725-38283744 | Msa0987560:intron | 30.0% | |
| GATTTAAATTATGGCAAGGA+AGG | - | chr6_4:38283774-38283793 | Msa0987560:intron | 30.0% | |
| TCAAACTATGCACTAGTATA+TGG | - | chr6_4:38283855-38283874 | Msa0987560:intron | 30.0% | |
| ATAGTCTATTACCATATGGA+AGG | + | chr6_4:38283982-38284001 | None:intergenic | 30.0% | |
| ! | GAAAGGTTTTTATATTGGGA+TGG | - | chr6_4:38284105-38284124 | Msa0987560:intron | 30.0% |
| TGATGGTATGAATGGAAAAA+TGG | - | chr6_4:38284459-38284478 | Msa0987560:CDS | 30.0% | |
| TGAACAGCATAAAATGAAAG+AGG | + | chr6_4:38284554-38284573 | None:intergenic | 30.0% | |
| ! | ATGCTGTATTTTCATTCTAC+CGG | - | chr6_4:38285072-38285091 | Msa0987560:intron | 30.0% |
| ACAACTGCCATCTAAAAATA+AGG | + | chr6_4:38285120-38285139 | None:intergenic | 30.0% | |
| !! | ATTTTTAGATGGCAGTTGTT+TGG | - | chr6_4:38285121-38285140 | Msa0987560:intron | 30.0% |
| TTCCATTTAGCTATATGGTA+TGG | - | chr6_4:38285228-38285247 | Msa0987560:intron | 30.0% | |
| ! | CTTAGGTTTTCCAAAATTGA+TGG | - | chr6_4:38285251-38285270 | Msa0987560:intron | 30.0% |
| GAGTAAATCATATTCGATAC+AGG | - | chr6_4:38285273-38285292 | Msa0987560:intron | 30.0% | |
| ! | AAATTTGGAACATACTCCTT+GGG | + | chr6_4:38285326-38285345 | None:intergenic | 30.0% |
| ! | AAAATTTGGAACATACTCCT+TGG | + | chr6_4:38285327-38285346 | None:intergenic | 30.0% |
| AAATTTCTCCATTTGTTCCA+CGG | - | chr6_4:38285469-38285488 | Msa0987560:intron | 30.0% | |
| GAGATCTAAAAAATGAGACA+TGG | - | chr6_4:38285491-38285510 | Msa0987560:intron | 30.0% | |
| AAAAAATGAGACATGGTTGT+TGG | - | chr6_4:38285498-38285517 | Msa0987560:intron | 30.0% | |
| TTCTAATTCTAACTCAACAC+AGG | + | chr6_4:38285592-38285611 | None:intergenic | 30.0% | |
| AATATTAGTATCCAAGCACT+TGG | - | chr6_4:38285716-38285735 | Msa0987560:intron | 30.0% | |
| ATATTAGTATCCAAGCACTT+GGG | - | chr6_4:38285717-38285736 | Msa0987560:intron | 30.0% | |
| ! | CTTAACTAGTTTCTAATGGA+GGG | + | chr6_4:38285745-38285764 | None:intergenic | 30.0% |
| ! | TCTCCTTAACTAGTTTCTAA+TGG | + | chr6_4:38285749-38285768 | None:intergenic | 30.0% |
| ATATAGTTATATACTCCCTC+TGG | - | chr6_4:38286132-38286151 | Msa0987560:intron | 30.0% | |
| AAGAAACATAGGTCAACAAA+AGG | - | chr6_4:38286165-38286184 | Msa0987560:intron | 30.0% | |
| GATGTATCTGGTTAAGAATT+TGG | - | chr6_4:38286189-38286208 | Msa0987560:intron | 30.0% | |
| TTTATTTCACTACTTGCAGA+AGG | - | chr6_4:38286441-38286460 | Msa0987560:intron | 30.0% | |
| !! | TGGCTGATTTTCACAATAAT+CGG | + | chr6_4:38286623-38286642 | None:intergenic | 30.0% |
| ACAAACCAATAGACAAGAAT+AGG | + | chr6_4:38286812-38286831 | None:intergenic | 30.0% | |
| ! | TAAGAGGGTTGTTACATTTT+TGG | - | chr6_4:38286942-38286961 | Msa0987560:intron | 30.0% |
| TTTGAACCTTTAGATTTCAG+GGG | - | chr6_4:38287037-38287056 | Msa0987560:intron | 30.0% | |
| TGGACAAATACAGATTTACA+GGG | + | chr6_4:38287083-38287102 | None:intergenic | 30.0% | |
| !!! | TTGTTGATTCGGCTTTTAAG+GGG | + | chr6_4:38280716-38280735 | None:intergenic | 35.0% |
| !!! | GTTGTTGATTCGGCTTTTAA+GGG | + | chr6_4:38280717-38280736 | None:intergenic | 35.0% |
| !!! | TGTTGTTGATTCGGCTTTTA+AGG | + | chr6_4:38280718-38280737 | None:intergenic | 35.0% |
| ! | AATGAGGGTTGTTGTTGATT+CGG | + | chr6_4:38280727-38280746 | None:intergenic | 35.0% |
| AGAAAGCTTCTGATGATTCA+TGG | + | chr6_4:38280891-38280910 | None:intergenic | 35.0% | |
| TTGATATTGTCAGTTGAGCT+AGG | + | chr6_4:38281356-38281375 | None:intergenic | 35.0% | |
| !! | AACTTTGATTTTGGCGTTGT+TGG | - | chr6_4:38281497-38281516 | Msa0987560:CDS | 35.0% |
| GTCTTAGGTTTAATTCTTCC+TGG | - | chr6_4:38281530-38281549 | Msa0987560:intron | 35.0% | |
| CTAAACTAACCGACCAAAAT+TGG | + | chr6_4:38281558-38281577 | None:intergenic | 35.0% | |
| TTTGTAAGACCAAGCTCAAT+TGG | - | chr6_4:38281651-38281670 | Msa0987560:intron | 35.0% | |
| AGTGTATTGCAGAACAATAG+CGG | - | chr6_4:38281963-38281982 | Msa0987560:intron | 35.0% | |
| GTTAGAACGGACATTATTCA+TGG | - | chr6_4:38282284-38282303 | Msa0987560:intron | 35.0% | |
| AGTAATCCCAAATTCGAACT+CGG | + | chr6_4:38282314-38282333 | None:intergenic | 35.0% | |
| ! | CTGTGTGTATGTGAGTTTTA+AGG | - | chr6_4:38282334-38282353 | Msa0987560:intron | 35.0% |
| !!! | TGTGTATGTGAGTTTTAAGG+TGG | - | chr6_4:38282337-38282356 | Msa0987560:intron | 35.0% |
| TCAGTATTGCTAGTTCAACT+AGG | + | chr6_4:38282911-38282930 | None:intergenic | 35.0% | |
| AAATGCGATCCAACAACATT+AGG | + | chr6_4:38282944-38282963 | None:intergenic | 35.0% | |
| AATGTTGTTGGATCGCATTT+CGG | - | chr6_4:38282944-38282963 | Msa0987560:intron | 35.0% | |
| TTGCAGATAGCAGAAAATAG+TGG | + | chr6_4:38283233-38283252 | None:intergenic | 35.0% | |
| TGTTGAGGAAATAGTTTGAG+TGG | - | chr6_4:38283375-38283394 | Msa0987560:intron | 35.0% | |
| TGGATTTGGAAACAAGAAGA+AGG | - | chr6_4:38283514-38283533 | Msa0987560:intron | 35.0% | |
| ATTTGGAAACAAGAAGAAGG+AGG | - | chr6_4:38283517-38283536 | Msa0987560:intron | 35.0% | |
| TTTGGAAACAAGAAGAAGGA+GGG | - | chr6_4:38283518-38283537 | Msa0987560:intron | 35.0% | |
| TTATGCATGCTTCTACTGAT+TGG | - | chr6_4:38283616-38283635 | Msa0987560:intron | 35.0% | |
| ! | ATGCTTCTACTGATTGGAAA+TGG | - | chr6_4:38283622-38283641 | Msa0987560:intron | 35.0% |
| ! | ACATATACGTATAGTACTGG+TGG | - | chr6_4:38283674-38283693 | Msa0987560:intron | 35.0% |
| !! | CATATACGTATAGTACTGGT+GGG | - | chr6_4:38283675-38283694 | Msa0987560:intron | 35.0% |
| ! | GTTTCATTGATTGTGCACAA+GGG | + | chr6_4:38283720-38283739 | None:intergenic | 35.0% |
| ! | TGTTTCATTGATTGTGCACA+AGG | + | chr6_4:38283721-38283740 | None:intergenic | 35.0% |
| CAGCTGCAATTGCATATAAT+AGG | - | chr6_4:38283895-38283914 | Msa0987560:intron | 35.0% | |
| GGCAATAGTCTATTACCATA+TGG | + | chr6_4:38283986-38284005 | None:intergenic | 35.0% | |
| ATAGACTATTGCCGTGATTA+CGG | - | chr6_4:38283993-38284012 | Msa0987560:intron | 35.0% | |
| AACCACTTGACAACCAAAAA+GGG | + | chr6_4:38284029-38284048 | None:intergenic | 35.0% | |
| CAGAATAACAGGTCACATTA+GGG | + | chr6_4:38284060-38284079 | None:intergenic | 35.0% | |
| ACAGAATAACAGGTCACATT+AGG | + | chr6_4:38284061-38284080 | None:intergenic | 35.0% | |
| !!! | GTCAACACGATTATTTTGGA+AGG | - | chr6_4:38284259-38284278 | Msa0987560:intron | 35.0% |
| AGATGGTACAAATTGTCTGA+GGG | - | chr6_4:38284302-38284321 | Msa0987560:intron | 35.0% | |
| ! | GGTGAACAGTAAAGAGTATA+TGG | - | chr6_4:38284328-38284347 | Msa0987560:intron | 35.0% |
| TGGTATGAATGGAAAAATGG+AGG | - | chr6_4:38284462-38284481 | Msa0987560:CDS | 35.0% | |
| CATTGGATGCAAGTGTAAAA+CGG | - | chr6_4:38284490-38284509 | Msa0987560:intron | 35.0% | |
| ! | TTGCTCATTGCTGTTAAATG+TGG | - | chr6_4:38284705-38284724 | Msa0987560:intron | 35.0% |
| ! | TGCTCATTGCTGTTAAATGT+GGG | - | chr6_4:38284706-38284725 | Msa0987560:intron | 35.0% |
| AGAAACAGCTGGAAAAAGAA+AGG | + | chr6_4:38284887-38284906 | None:intergenic | 35.0% | |
| TAATAAAGCGGCCAAACAAT+AGG | + | chr6_4:38284951-38284970 | None:intergenic | 35.0% | |
| !!! | CTATCCGCCTTATTTTTAGA+TGG | - | chr6_4:38285110-38285129 | Msa0987560:intron | 35.0% |
| ACTGCCATCTAAAAATAAGG+CGG | + | chr6_4:38285117-38285136 | None:intergenic | 35.0% | |
| AGCCATACCATATAGCTAAA+TGG | + | chr6_4:38285233-38285252 | None:intergenic | 35.0% | |
| TTAGCTATATGGTATGGCTT+AGG | - | chr6_4:38285234-38285253 | Msa0987560:intron | 35.0% | |
| !!! | TCTCATTTTTTAGATCTCCG+TGG | + | chr6_4:38285489-38285508 | None:intergenic | 35.0% |
| ATGATCATTGCCATCAACAA+TGG | + | chr6_4:38285547-38285566 | None:intergenic | 35.0% | |
| ! | CCTTAACTAGTTTCTAATGG+AGG | + | chr6_4:38285746-38285765 | None:intergenic | 35.0% |
| CCTCCATTAGAAACTAGTTA+AGG | - | chr6_4:38285743-38285762 | Msa0987560:intron | 35.0% | |
| GACAGGAACAAGACAATTAT+GGG | + | chr6_4:38285803-38285822 | None:intergenic | 35.0% | |
| TGACAGGAACAAGACAATTA+TGG | + | chr6_4:38285804-38285823 | None:intergenic | 35.0% | |
| TGTAATCAAATCCTGGTTGT+TGG | + | chr6_4:38285925-38285944 | None:intergenic | 35.0% | |
| GATAAGTATCTATGCACTTG+AGG | - | chr6_4:38285948-38285967 | Msa0987560:intron | 35.0% | |
| GTCCTATACAGAAGAAACAT+AGG | - | chr6_4:38286154-38286173 | Msa0987560:intron | 35.0% | |
| GACCTATGTTTCTTCTGTAT+AGG | + | chr6_4:38286159-38286178 | None:intergenic | 35.0% | |
| TCAACAAAAGGTGATGTATC+TGG | - | chr6_4:38286177-38286196 | Msa0987560:intron | 35.0% | |
| TCTCTTATAAATATGACCGG+AGG | - | chr6_4:38286244-38286263 | Msa0987560:intron | 35.0% | |
| CAGAAGGAGTTAGATTATTG+TGG | - | chr6_4:38286457-38286476 | Msa0987560:intron | 35.0% | |
| TGAAAATCAGCCAAAGAACT+CGG | - | chr6_4:38286630-38286649 | Msa0987560:intron | 35.0% | |
| TTTGAAAACACCGAGTTCTT+TGG | + | chr6_4:38286643-38286662 | None:intergenic | 35.0% | |
| ! | TCAGCTTTATCAAATTGGTG+AGG | - | chr6_4:38286693-38286712 | Msa0987560:intron | 35.0% |
| ! | CAGCTTTATCAAATTGGTGA+GGG | - | chr6_4:38286694-38286713 | Msa0987560:intron | 35.0% |
| CTAGTCCTATTCTTGTCTAT+TGG | - | chr6_4:38286804-38286823 | Msa0987560:intron | 35.0% | |
| ATCGTGCAAGAAATGATAAG+AGG | - | chr6_4:38286926-38286945 | Msa0987560:intron | 35.0% | |
| TCGTGCAAGAAATGATAAGA+GGG | - | chr6_4:38286927-38286946 | Msa0987560:intron | 35.0% | |
| CGCATTGAAAAACTTTACAG+AGG | + | chr6_4:38287011-38287030 | None:intergenic | 35.0% | |
| GGACAAATACAGATTTACAG+GGG | + | chr6_4:38287082-38287101 | None:intergenic | 35.0% | |
| GTGGACAAATACAGATTTAC+AGG | + | chr6_4:38287084-38287103 | None:intergenic | 35.0% | |
| AACAACTGTAAATCGCCATA+TGG | + | chr6_4:38287116-38287135 | None:intergenic | 35.0% | |
| !!! | TGTTGATTCGGCTTTTAAGG+GGG | + | chr6_4:38280715-38280734 | None:intergenic | 40.0% |
| CTGAGAAAGAGAATTAGCAG+CGG | + | chr6_4:38280855-38280874 | None:intergenic | 40.0% | |
| ! | CAGAAGCTTTCTTTTCATGC+TGG | - | chr6_4:38280899-38280918 | Msa0987560:three_prime_UTR | 40.0% |
| !! | ATTCTTCCTGGTGCCAATTT+TGG | - | chr6_4:38281542-38281561 | Msa0987560:intron | 40.0% |
| CTCATGTTGTAGAGAAGAGT+TGG | - | chr6_4:38281804-38281823 | Msa0987560:intron | 40.0% | |
| ATGTTGTAGAGAAGAGTTGG+CGG | - | chr6_4:38281807-38281826 | Msa0987560:intron | 40.0% | |
| CTGCTACATTGTAGCAGTAT+GGG | + | chr6_4:38282029-38282048 | None:intergenic | 40.0% | |
| GTAATCCCAAATTCGAACTC+GGG | + | chr6_4:38282313-38282332 | None:intergenic | 40.0% | |
| CTCATGTTGTAGAGAAGAGT+TGG | - | chr6_4:38281804-38281823 | Msa0987560:intron | 40.0% | |
| ! | TGTTGTAGAGAAGAGTTGGT+AGG | - | chr6_4:38282694-38282713 | Msa0987560:intron | 40.0% |
| ATGTTGTTGGATCGCATTTC+GGG | - | chr6_4:38282945-38282964 | Msa0987560:intron | 40.0% | |
| ! | ATGTCAGATATCGGCTATAG+TGG | - | chr6_4:38283171-38283190 | Msa0987560:intron | 40.0% |
| !!! | TCTTTTGAAGCATTGTGCTG+TGG | - | chr6_4:38283306-38283325 | Msa0987560:intron | 40.0% |
| ! | CTTCTACTGATTGGAAATGG+AGG | - | chr6_4:38283625-38283644 | Msa0987560:intron | 40.0% |
| AGAGAGATTGACTGCAACAA+AGG | - | chr6_4:38283752-38283771 | Msa0987560:intron | 40.0% | |
| TAGACTATTGCCGTGATTAC+GGG | - | chr6_4:38283994-38284013 | Msa0987560:intron | 40.0% | |
| CAACCACTTGACAACCAAAA+AGG | + | chr6_4:38284030-38284049 | None:intergenic | 40.0% | |
| !! | TTTTGGTTGTCAAGTGGTTG+TGG | - | chr6_4:38284030-38284049 | Msa0987560:intron | 40.0% |
| GGATGGCTAAAAGTTGAAGT+GGG | - | chr6_4:38284122-38284141 | Msa0987560:intron | 40.0% | |
| !! | TTGGAAGGTATCCTTTCTTG+TGG | - | chr6_4:38284274-38284293 | Msa0987560:intron | 40.0% |
| !! | TGGAAGGTATCCTTTCTTGT+GGG | - | chr6_4:38284275-38284294 | Msa0987560:intron | 40.0% |
| GAGATGGTACAAATTGTCTG+AGG | - | chr6_4:38284301-38284320 | Msa0987560:intron | 40.0% | |
| TTACACTTGCATCCAATGAC+AGG | + | chr6_4:38284488-38284507 | None:intergenic | 40.0% | |
| ! | AAATGTGGGTTAAGCTTACC+AGG | - | chr6_4:38284720-38284739 | Msa0987560:intron | 40.0% |
| AACAGCTGGAAAAAGAAAGG+AGG | + | chr6_4:38284884-38284903 | None:intergenic | 40.0% | |
| TTAGATGGCAGTTGTTTGGT+TGG | - | chr6_4:38285125-38285144 | Msa0987560:intron | 40.0% | |
| ATCACAATCACCATTGCCAA+TGG | + | chr6_4:38285157-38285176 | None:intergenic | 40.0% | |
| ATTCTCGCGAAATAGAACCA+TGG | - | chr6_4:38285182-38285201 | Msa0987560:intron | 40.0% | |
| TTCTCGCGAAATAGAACCAT+GGG | - | chr6_4:38285183-38285202 | Msa0987560:intron | 40.0% | |
| TGCTCACAACAAGAAGAACA+AGG | + | chr6_4:38285437-38285456 | None:intergenic | 40.0% | |
| TTAGATCTCCGTGGAACAAA+TGG | + | chr6_4:38285480-38285499 | None:intergenic | 40.0% | |
| TGTACACGATCCATTGTTGA+TGG | - | chr6_4:38285534-38285553 | Msa0987560:intron | 40.0% | |
| GAACACATGTCACACAACTA+GGG | + | chr6_4:38285687-38285706 | None:intergenic | 40.0% | |
| TGAACACATGTCACACAACT+AGG | + | chr6_4:38285688-38285707 | None:intergenic | 40.0% | |
| AACTAGATACCACTCGATGT+GGG | - | chr6_4:38285768-38285787 | Msa0987560:intron | 40.0% | |
| ! | TTGTCTTGTTCCTGTCATAG+CGG | - | chr6_4:38285807-38285826 | Msa0987560:intron | 40.0% |
| !! | TTTTTGGTCAGCCCATTTGT+AGG | - | chr6_4:38285882-38285901 | Msa0987560:intron | 40.0% |
| AGAAAGGGCTACCTACAAAT+GGG | + | chr6_4:38285896-38285915 | None:intergenic | 40.0% | |
| AAGAAAGGGCTACCTACAAA+TGG | + | chr6_4:38285897-38285916 | None:intergenic | 40.0% | |
| ! | GGTTGTTGGTGTCTAAGAAA+GGG | + | chr6_4:38285911-38285930 | None:intergenic | 40.0% |
| ! | TGGTTGTTGGTGTCTAAGAA+AGG | + | chr6_4:38285912-38285931 | None:intergenic | 40.0% |
| TTTCTTAGACACCAACAACC+AGG | - | chr6_4:38285911-38285930 | Msa0987560:intron | 40.0% | |
| TTCTTCTGTATAGGACCAGA+GGG | + | chr6_4:38286150-38286169 | None:intergenic | 40.0% | |
| TTTCTTCTGTATAGGACCAG+AGG | + | chr6_4:38286151-38286170 | None:intergenic | 40.0% | |
| CTTTATCAAATTGGTGAGGG+TGG | - | chr6_4:38286697-38286716 | Msa0987560:intron | 40.0% | |
| TTCCAATAACGATTCTGCCA+TGG | - | chr6_4:38286768-38286787 | Msa0987560:intron | 40.0% | |
| ATCCATGGCAGAATCGTTAT+TGG | + | chr6_4:38286773-38286792 | None:intergenic | 40.0% | |
| ! | TTGCAGTTTTTGCAGAAGAC+AGG | + | chr6_4:38286855-38286874 | None:intergenic | 40.0% |
| CAAGGAATTGTGATGGTTGT+TGG | + | chr6_4:38286884-38286903 | None:intergenic | 40.0% | |
| AACCATCACAATTCCTTGTC+TGG | - | chr6_4:38286886-38286905 | Msa0987560:intron | 40.0% | |
| ATCCAGACAAGGAATTGTGA+TGG | + | chr6_4:38286891-38286910 | None:intergenic | 40.0% | |
| AAGCAACCCCTGAAATCTAA+AGG | + | chr6_4:38287046-38287065 | None:intergenic | 40.0% | |
| GTCCACAGATTCTATCCATA+TGG | - | chr6_4:38287098-38287117 | Msa0987560:CDS | 40.0% | |
| GGGGAGATTATGGAAAGAGA+GGG | + | chr6_4:38280696-38280715 | None:intergenic | 45.0% | |
| !! | GGCTTTTAAGGGGGAGATTA+TGG | + | chr6_4:38280706-38280725 | None:intergenic | 45.0% |
| CGTTTCTTCGCCATTGGAAT+CGG | + | chr6_4:38280773-38280792 | None:intergenic | 45.0% | |
| GACTTACGTTTCTTCGCCAT+TGG | + | chr6_4:38280779-38280798 | None:intergenic | 45.0% | |
| AGAAAGAGAATTAGCAGCGG+TGG | + | chr6_4:38280852-38280871 | None:intergenic | 45.0% | |
| GTGAACGTAACGCTCTTGTA+TGG | - | chr6_4:38280921-38280940 | Msa0987560:three_prime_UTR | 45.0% | |
| AGACCTAGTTCAAGCTGTGA+AGG | - | chr6_4:38281129-38281148 | Msa0987560:three_prime_UTR | 45.0% | |
| CTAGTTCAAGCTGTGAAGGA+CGG | - | chr6_4:38281133-38281152 | Msa0987560:three_prime_UTR | 45.0% | |
| TCCTTGTATTAGACGTGTCC+CGG | - | chr6_4:38281160-38281179 | Msa0987560:three_prime_UTR | 45.0% | |
| ! | ATTATATGCGTCGGTGACAC+CGG | + | chr6_4:38281182-38281201 | None:intergenic | 45.0% |
| !! | GTTGGCTTTGACTGAGTCTT+AGG | - | chr6_4:38281515-38281534 | Msa0987560:CDS | 45.0% |
| !! | TTCCTGGTGCCAATTTTGGT+CGG | - | chr6_4:38281546-38281565 | Msa0987560:intron | 45.0% |
| TGTTGTAGAGAAGAGTTGGC+GGG | - | chr6_4:38281808-38281827 | Msa0987560:intron | 45.0% | |
| GATAGCAGAGCCATACAGTA+TGG | + | chr6_4:38281922-38281941 | None:intergenic | 45.0% | |
| GCTGCTACATTGTAGCAGTA+TGG | + | chr6_4:38282030-38282049 | None:intergenic | 45.0% | |
| ! | TTGTCAGATAGCGGCTATAG+TGG | - | chr6_4:38282084-38282103 | Msa0987560:intron | 45.0% |
| TGGTAACCCGAGTTCGAATT+TGG | - | chr6_4:38282304-38282323 | Msa0987560:intron | 45.0% | |
| GGTAACCCGAGTTCGAATTT+GGG | - | chr6_4:38282305-38282324 | Msa0987560:intron | 45.0% | |
| GGATACTTGGGTTTGAACTC+AGG | - | chr6_4:38282587-38282606 | Msa0987560:intron | 45.0% | |
| !! | AAAAAGTACCGGCTCTGTAG+CGG | - | chr6_4:38283008-38283027 | Msa0987560:intron | 45.0% |
| !! | TGAAGCATTGTGCTGTGGTA+TGG | - | chr6_4:38283311-38283330 | Msa0987560:intron | 45.0% |
| ATGAAGCAGCTTTGCAAAGC+TGG | - | chr6_4:38283826-38283845 | Msa0987560:intron | 45.0% | |
| !!! | TGCCCTTTTTGGTTGTCAAG+TGG | - | chr6_4:38284024-38284043 | Msa0987560:intron | 45.0% |
| GGGATGGCTAAAAGTTGAAG+TGG | - | chr6_4:38284121-38284140 | Msa0987560:intron | 45.0% | |
| GTACAAATTGTCTGAGGGAC+TGG | - | chr6_4:38284307-38284326 | Msa0987560:intron | 45.0% | |
| ATCTCCTGAAAACACTCGCT+TGG | - | chr6_4:38284368-38284387 | Msa0987560:intron | 45.0% | |
| ! | CATACCAAGCGAGTGTTTTC+AGG | + | chr6_4:38284375-38284394 | None:intergenic | 45.0% |
| GAAAAATGGAGGCCTGTCAT+TGG | - | chr6_4:38284473-38284492 | Msa0987560:CDS | 45.0% | |
| TTACCAGGAGCTATCTCATG+TGG | - | chr6_4:38284735-38284754 | Msa0987560:intron | 45.0% | |
| GTTTGGTTGGCATCTTCCAT+TGG | - | chr6_4:38285138-38285157 | Msa0987560:intron | 45.0% | |
| TTGGCATCTTCCATTGGCAA+TGG | - | chr6_4:38285144-38285163 | Msa0987560:intron | 45.0% | |
| TACTTATTGATCTGCGCCCA+AGG | - | chr6_4:38285307-38285326 | Msa0987560:intron | 45.0% | |
| GAACTAGATACCACTCGATG+TGG | - | chr6_4:38285767-38285786 | Msa0987560:intron | 45.0% | |
| ACTCTCTGCGGTGTTTCATT+CGG | - | chr6_4:38285858-38285877 | Msa0987560:intron | 45.0% | |
| !! | CGGTGTTTCATTCGGGTTTT+TGG | - | chr6_4:38285866-38285885 | Msa0987560:intron | 45.0% |
| GAACTGGTGACAGGTATCAT+TGG | + | chr6_4:38286535-38286554 | None:intergenic | 45.0% | |
| AGTGACTGGAAAGACTGAAC+TGG | + | chr6_4:38286551-38286570 | None:intergenic | 45.0% | |
| TCAGTCTTTCCAGTCACTTC+AGG | - | chr6_4:38286553-38286572 | Msa0987560:intron | 45.0% | |
| ACTTCTGGCCAAACAATAGC+TGG | - | chr6_4:38286577-38286596 | Msa0987560:intron | 45.0% | |
| CTTCTGGCCAAACAATAGCT+GGG | - | chr6_4:38286578-38286597 | Msa0987560:intron | 45.0% | |
| TTCTGGCCAAACAATAGCTG+GGG | - | chr6_4:38286579-38286598 | Msa0987560:intron | 45.0% | |
| GCTGAAGATTTCGACGAACA+GGG | + | chr6_4:38286678-38286697 | None:intergenic | 45.0% | |
| AGCTGAAGATTTCGACGAAC+AGG | + | chr6_4:38286679-38286698 | None:intergenic | 45.0% | |
| CTAGTCTGCATGCATATCCA+TGG | + | chr6_4:38286788-38286807 | None:intergenic | 45.0% | |
| AGAGCAAGCAAATCCAGACA+AGG | + | chr6_4:38286902-38286921 | None:intergenic | 45.0% | |
| ! | GTCTGGATTTGCTTGCTCTT+TGG | - | chr6_4:38286903-38286922 | Msa0987560:intron | 45.0% |
| AAGACTCCAAACCAATCGCT+TGG | + | chr6_4:38286982-38287001 | None:intergenic | 45.0% | |
| CGCCATATGGATAGAATCTG+TGG | + | chr6_4:38287103-38287122 | None:intergenic | 45.0% | |
| CGATTTACAGTTGTTGACGC+CGG | - | chr6_4:38287121-38287140 | Msa0987560:CDS | 45.0% | |
| !! | AAAATGAAATAATTATATTT+GGG | - | chr6_4:38284976-38284995 | Msa0987560:intron | 5.0% |
| !!! | AATAATTTCTTTTAAAAATT+TGG | + | chr6_4:38285341-38285360 | None:intergenic | 5.0% |
| GGGGGAGATTATGGAAAGAG+AGG | + | chr6_4:38280697-38280716 | None:intergenic | 50.0% | |
| TTCTTCGCCATTGGAATCGG+CGG | + | chr6_4:38280770-38280789 | None:intergenic | 50.0% | |
| CAAGTCTCGACGAAGTCGAT+CGG | - | chr6_4:38280807-38280826 | Msa0987560:three_prime_UTR | 50.0% | |
| ! | GGTGGAGAAGGAAGCATACA+TGG | + | chr6_4:38280834-38280853 | None:intergenic | 50.0% |
| AGAATTAGCAGCGGTGGAGA+AGG | + | chr6_4:38280846-38280865 | None:intergenic | 50.0% | |
| CGTCCTTCACAGCTTGAACT+AGG | + | chr6_4:38281135-38281154 | None:intergenic | 50.0% | |
| ACCGGGACACGTCTAATACA+AGG | + | chr6_4:38281164-38281183 | None:intergenic | 50.0% | |
| ! | TTATATGCGTCGGTGACACC+GGG | + | chr6_4:38281181-38281200 | None:intergenic | 50.0% |
| AACCGACCAAAATTGGCACC+AGG | + | chr6_4:38281551-38281570 | None:intergenic | 50.0% | |
| ACCTTAAACTCACACCCGAG+CGG | + | chr6_4:38281739-38281758 | None:intergenic | 50.0% | |
| TATAGCGGCGCCATACTGTA+TGG | - | chr6_4:38281909-38281928 | Msa0987560:intron | 50.0% | |
| !! | CATTGACTCGCACACAAAGC+GGG | + | chr6_4:38282974-38282993 | None:intergenic | 50.0% |
| !! | GCATTGACTCGCACACAAAG+CGG | + | chr6_4:38282975-38282994 | None:intergenic | 50.0% |
| TCCAAATTCCGCTACAGAGC+CGG | + | chr6_4:38283019-38283038 | None:intergenic | 50.0% | |
| AACAAGAAGAAGGAGGGTCG+AGG | - | chr6_4:38283524-38283543 | Msa0987560:intron | 50.0% | |
| ACAAGAAGAAGGAGGGTCGA+GGG | - | chr6_4:38283525-38283544 | Msa0987560:intron | 50.0% | |
| !! | AACCACTTTGGTGGCGGTAT+CGG | + | chr6_4:38283952-38283971 | None:intergenic | 50.0% |
| ATCCACAACCACTTTGGTGG+CGG | + | chr6_4:38283958-38283977 | None:intergenic | 50.0% | |
| !! | GAAGGCATCCACAACCACTT+TGG | + | chr6_4:38283964-38283983 | None:intergenic | 50.0% |
| GGTTGTGGATGCCTTCCATA+TGG | - | chr6_4:38283968-38283987 | Msa0987560:intron | 50.0% | |
| TATTGCCGTGATTACGGGCA+TGG | - | chr6_4:38283999-38284018 | Msa0987560:intron | 50.0% | |
| GCAAACCATGCCCGTAATCA+CGG | + | chr6_4:38284007-38284026 | None:intergenic | 50.0% | |
| CCATCTCAAGCCCACAAGAA+AGG | + | chr6_4:38284288-38284307 | None:intergenic | 50.0% | |
| CCTTTCTTGTGGGCTTGAGA+TGG | - | chr6_4:38284285-38284304 | Msa0987560:intron | 50.0% | |
| TCATTCTACCGGCCAAAAGC+TGG | - | chr6_4:38285083-38285102 | Msa0987560:intron | 50.0% | |
| ! | ATAGTGTGCCAGCTTTTGGC+CGG | + | chr6_4:38285094-38285113 | None:intergenic | 50.0% |
| ATGCTAAGTCCCACATCGAG+TGG | + | chr6_4:38285780-38285799 | None:intergenic | 50.0% | |
| AGTCGCGAAACGTCAACTCT+CGG | + | chr6_4:38285836-38285855 | None:intergenic | 50.0% | |
| CTCTCTGCGGTGTTTCATTC+GGG | - | chr6_4:38285859-38285878 | Msa0987560:intron | 50.0% | |
| ! | GTGACAGGTATCATTGGCTG+TGG | + | chr6_4:38286529-38286548 | None:intergenic | 50.0% |
| GGAAAGACTGAACTGGTGAC+AGG | + | chr6_4:38286544-38286563 | None:intergenic | 50.0% | |
| CCAGAAGTTCCTGAAGTGAC+TGG | + | chr6_4:38286565-38286584 | None:intergenic | 50.0% | |
| CCAGTCACTTCAGGAACTTC+TGG | - | chr6_4:38286562-38286581 | Msa0987560:intron | 50.0% | |
| !! | GGTGGTGGATGGAGGAATGA+GGG | + | chr6_4:38280742-38280761 | None:intergenic | 55.0% |
| CCATTGGAATCGGCGGAGAT+CGG | + | chr6_4:38280763-38280782 | None:intergenic | 55.0% | |
| GACTTCGTCGAGACTTGACG+CGG | + | chr6_4:38280804-38280823 | None:intergenic | 55.0% | |
| CGAATTTCGGGATTCCCGCT+CGG | - | chr6_4:38281721-38281740 | Msa0987560:intron | 55.0% | |
| GAATTTCGGGATTCCCGCTC+GGG | - | chr6_4:38281722-38281741 | Msa0987560:intron | 55.0% | |
| CCTTAAACTCACACCCGAGC+GGG | + | chr6_4:38281738-38281757 | None:intergenic | 55.0% | |
| GCTCGGGTGTGAGTTTAAGG+TGG | - | chr6_4:38281738-38281757 | Msa0987560:intron | 55.0% | |
| ! | ACCGGCTCTGTAGCGGAATT+TGG | - | chr6_4:38283015-38283034 | Msa0987560:intron | 55.0% |
| TACCGCCACCAAAGTGGTTG+TGG | - | chr6_4:38283953-38283972 | Msa0987560:intron | 55.0% | |
| GGCATCCACAACCACTTTGG+TGG | + | chr6_4:38283961-38283980 | None:intergenic | 55.0% | |
| !! | CGGGCATGGTTTGCCCTTTT+TGG | - | chr6_4:38284013-38284032 | Msa0987560:intron | 55.0% |
| CAGCCACATGAGATAGCTCC+TGG | + | chr6_4:38284741-38284760 | None:intergenic | 55.0% | |
| ! | GCGGATAGTGTGCCAGCTTT+TGG | + | chr6_4:38285098-38285117 | None:intergenic | 55.0% |
| TCGCGAAACGTCAACTCTCG+GGG | + | chr6_4:38285834-38285853 | None:intergenic | 55.0% | |
| GTCGCGAAACGTCAACTCTC+GGG | + | chr6_4:38285835-38285854 | None:intergenic | 55.0% | |
| TTTCGCGACTGCACTCTCTG+CGG | - | chr6_4:38285846-38285865 | Msa0987560:intron | 55.0% | |
| !! | TGGTTTTGCAGTGGCGCTCT+GGG | + | chr6_4:38286502-38286521 | None:intergenic | 55.0% |
| !!! | TGTGGCTGCTGGTTTTGCAG+TGG | + | chr6_4:38286511-38286530 | None:intergenic | 55.0% |
| ! | GTATCATTGGCTGTGGCTGC+TGG | + | chr6_4:38286522-38286541 | None:intergenic | 55.0% |
| GCTTACGTCGACCAAGCGAT+TGG | - | chr6_4:38286968-38286987 | Msa0987560:intron | 55.0% | |
| ! | CGTCGACCAAGCGATTGGTT+TGG | - | chr6_4:38286973-38286992 | Msa0987560:intron | 55.0% |
| !! | CGGTGGTGGATGGAGGAATG+AGG | + | chr6_4:38280743-38280762 | None:intergenic | 60.0% |
| TTGGAATCGGCGGAGATCGG+TGG | + | chr6_4:38280760-38280779 | None:intergenic | 60.0% | |
| !! | CCGATCTCCGCCGATTCCAA+TGG | - | chr6_4:38280760-38280779 | Msa0987560:three_prime_UTR | 60.0% |
| TTCGTCGAGACTTGACGCGG+CGG | + | chr6_4:38280801-38280820 | None:intergenic | 60.0% | |
| CCCGCTCGGGTGTGAGTTTA+AGG | - | chr6_4:38281735-38281754 | Msa0987560:intron | 60.0% | |
| ATGGAGGGCTCCCAAGTGCT+TGG | + | chr6_4:38285730-38285749 | None:intergenic | 60.0% | |
| CGCGAAACGTCAACTCTCGG+GGG | + | chr6_4:38285833-38285852 | None:intergenic | 60.0% | |
| !!! | CTGGTTTTGCAGTGGCGCTC+TGG | + | chr6_4:38286503-38286522 | None:intergenic | 60.0% |
| GGCCAAACAATAGCTGGGGC+CGG | - | chr6_4:38286583-38286602 | Msa0987560:intron | 60.0% | |
| GCCAAACAATAGCTGGGGCC+GGG | - | chr6_4:38286584-38286603 | Msa0987560:intron | 60.0% | |
| ATCGGAGCGTAGTCCTTGCC+CGG | + | chr6_4:38286605-38286624 | None:intergenic | 60.0% | |
| !! | CGGAGATCGGTGGTGGATGG+AGG | + | chr6_4:38280750-38280769 | None:intergenic | 65.0% |
| GAATCGGCGGAGATCGGTGG+TGG | + | chr6_4:38280757-38280776 | None:intergenic | 65.0% | |
| GGCCGATACCGCCACCAAAG+TGG | - | chr6_4:38283947-38283966 | Msa0987560:intron | 65.0% | |
| ! | GGCGCTCTGGGTGACATGGA+TGG | + | chr6_4:38286490-38286509 | None:intergenic | 65.0% |
| ! | CAGTGGCGCTCTGGGTGACA+TGG | + | chr6_4:38286494-38286513 | None:intergenic | 65.0% |
| GCCCGGCCCCAGCTATTGTT+TGG | + | chr6_4:38286588-38286607 | None:intergenic | 65.0% | |
| ACAATAGCTGGGGCCGGGCA+AGG | - | chr6_4:38286589-38286608 | Msa0987560:intron | 65.0% | |
| !! | CGGCGGAGATCGGTGGTGGA+TGG | + | chr6_4:38280753-38280772 | None:intergenic | 70.0% |
| CTCTCGGGGGCCGCTATGAC+AGG | + | chr6_4:38285820-38285839 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 38280689 | 38287314 | 38280689 | ID=Msa0987560;Name=Msa0987560 |
| chr6_4 | mRNA | 38280689 | 38287314 | 38280689 | ID=Msa0987560-mRNA-1;Parent=Msa0987560;Name=Msa0987560-mRNA-1;_AED=0.02;_eAED=0.02;_QI=90|1|1|1|1|1|3|507|195 |
| chr6_4 | exon | 38280689 | 38281543 | 38280689 | ID=Msa0987560-mRNA-1:exon:9433;Parent=Msa0987560-mRNA-1 |
| chr6_4 | exon | 38284424 | 38284504 | 38284424 | ID=Msa0987560-mRNA-1:exon:9432;Parent=Msa0987560-mRNA-1 |
| chr6_4 | exon | 38287066 | 38287314 | 38287066 | ID=Msa0987560-mRNA-1:exon:9431;Parent=Msa0987560-mRNA-1 |
| chr6_4 | five_prime_UTR | 38287225 | 38287314 | 38287225 | ID=Msa0987560-mRNA-1:five_prime_utr;Parent=Msa0987560-mRNA-1 |
| chr6_4 | CDS | 38287066 | 38287224 | 38287066 | ID=Msa0987560-mRNA-1:cds;Parent=Msa0987560-mRNA-1 |
| chr6_4 | CDS | 38284424 | 38284504 | 38284424 | ID=Msa0987560-mRNA-1:cds;Parent=Msa0987560-mRNA-1 |
| chr6_4 | CDS | 38281196 | 38281543 | 38281196 | ID=Msa0987560-mRNA-1:cds;Parent=Msa0987560-mRNA-1 |
| chr6_4 | three_prime_UTR | 38280689 | 38281195 | 38280689 | ID=Msa0987560-mRNA-1:three_prime_utr;Parent=Msa0987560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
