Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561910 | XP_013457394.1 | 95.398 | 565 | 9 | 1 | 1 | 548 | 1 | 565 | 0.0 | 1113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561910 | sp|Q8H2D5|POLH_ARATH | 67.505 | 517 | 143 | 4 | 1 | 497 | 1 | 512 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561910 | A0A072V014 | 95.398 | 565 | 9 | 1 | 1 | 548 | 1 | 565 | 0.0 | 1113 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011250 | Msa0561910 | 0.802811 | 4.699394e-49 | -8.615850e-47 |
| Msa0043560 | Msa0561910 | 0.810519 | 1.107025e-50 | -8.615850e-47 |
| Msa0105070 | Msa0561910 | 0.801151 | 1.031047e-48 | -8.615850e-47 |
| Msa0305190 | Msa0561910 | 0.805491 | 1.301006e-49 | -8.615850e-47 |
| Msa0350870 | Msa0561910 | 0.818021 | 2.435894e-52 | -8.615850e-47 |
| Msa0498220 | Msa0561910 | 0.813951 | 1.973820e-51 | -8.615850e-47 |
| Msa0523940 | Msa0561910 | 0.808124 | 3.612391e-50 | -8.615850e-47 |
| Msa0542480 | Msa0561910 | 0.821154 | 4.694388e-53 | -8.615850e-47 |
| Msa0561910 | Msa0594560 | 0.800869 | 1.177060e-48 | -8.615850e-47 |
| Msa0561910 | Msa0753720 | 0.803473 | 3.427800e-49 | -8.615850e-47 |
| Msa0561910 | Msa0760130 | 0.812007 | 5.263737e-51 | -8.615850e-47 |
| Msa0561910 | Msa0801780 | 0.822015 | 2.970137e-53 | -8.615850e-47 |
| Msa0561910 | Msa0828540 | 0.806668 | 7.356912e-50 | -8.615850e-47 |
| Msa0561910 | Msa0924310 | 0.801410 | 9.123215e-49 | -8.615850e-47 |
| Msa0561910 | Msa0927290 | 0.810096 | 1.366290e-50 | -8.615850e-47 |
| Msa0561910 | Msa0927380 | 0.818577 | 1.822978e-52 | -8.615850e-47 |
| Msa0561910 | Msa0969520 | 0.801516 | 8.677147e-49 | -8.615850e-47 |
| Msa0561910 | Msa1030970 | 0.828367 | 9.350449e-55 | -8.615850e-47 |
| Msa0561910 | Msa1075220 | -0.805511 | 1.288685e-49 | -8.615850e-47 |
| Msa0561910 | Msa1121490 | 0.818154 | 2.272600e-52 | -8.615850e-47 |
| Msa0561910 | Msa1192990 | 0.800422 | 1.452073e-48 | -8.615850e-47 |
| Msa0561910 | Msa1229600 | 0.800824 | 1.202386e-48 | -8.615850e-47 |
| Msa0561910 | Msa1239720 | 0.819782 | 9.693054e-53 | -8.615850e-47 |
| Msa0561910 | Msa1242670 | 0.800474 | 1.417279e-48 | -8.615850e-47 |
| Msa0561910 | Msa1284680 | 0.809875 | 1.524177e-50 | -8.615850e-47 |
| Msa0561910 | Msa1310210 | 0.804248 | 2.366641e-49 | -8.615850e-47 |
| Msa0561910 | Msa1372760 | 0.817468 | 3.246075e-52 | -8.615850e-47 |
| Msa0561910 | Msa1393410 | 0.812765 | 3.596078e-51 | -8.615850e-47 |
| Msa0561910 | Msa1435420 | 0.813951 | 1.973563e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561910 | MtrunA17_Chr4g0052811 | 94.412 | 519 | 10 | 2 | 1 | 502 | 1 | 517 | 0.0 | 1007 |
| Msa0561910 | MtrunA17_Chr5g0393611 | 27.528 | 356 | 196 | 12 | 13 | 362 | 370 | 669 | 1.32e-23 | 105 |
| Msa0561910 | MtrunA17_Chr5g0393781 | 26.686 | 341 | 187 | 11 | 12 | 346 | 98 | 381 | 9.06e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561910 | AT5G44740.2 | 67.505 | 517 | 143 | 4 | 1 | 497 | 1 | 512 | 0.0 | 709 |
| Msa0561910 | AT5G44740.3 | 65.111 | 450 | 132 | 4 | 68 | 497 | 1 | 445 | 0.0 | 593 |
| Msa0561910 | AT5G44740.1 | 63.043 | 414 | 128 | 4 | 104 | 497 | 20 | 428 | 0.0 | 525 |
| Msa0561910 | AT1G49980.3 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 1.75e-21 | 99.0 |
| Msa0561910 | AT1G49980.2 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 1.75e-21 | 99.0 |
| Msa0561910 | AT1G49980.4 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 2.32e-21 | 98.6 |
| Msa0561910 | AT1G49980.5 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 2.32e-21 | 98.6 |
| Msa0561910 | AT1G49980.7 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 2.32e-21 | 98.6 |
| Msa0561910 | AT1G49980.8 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 2.32e-21 | 98.6 |
| Msa0561910 | AT1G49980.1 | 27.907 | 344 | 179 | 11 | 12 | 346 | 103 | 386 | 3.17e-21 | 98.2 |
Find 130 sgRNAs with CRISPR-Local
Find 478 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACATGTTCCACGCTTTC+AGG | 0.161323 | 4_1:+61563287 | None:intergenic |
| AGAGAAAGCAACCAAGTTTA+AGG | 0.202426 | 4_1:-61563806 | Msa0561910:CDS |
| TGCTGCTCAAACAATGTTAA+TGG | 0.232370 | 4_1:-61563318 | Msa0561910:CDS |
| AAGTTAGGAAGTGGATTTGT+AGG | 0.237946 | 4_1:-61562045 | Msa0561910:CDS |
| AAATCTTGTCCTTTAAGATA+TGG | 0.238114 | 4_1:-61560359 | Msa0561910:CDS |
| AGTTCTCAAGTCACATGTTT+TGG | 0.238366 | 4_1:-61563258 | Msa0561910:CDS |
| CAACGTTATGGGATCAATAC+TGG | 0.259543 | 4_1:-61561337 | Msa0561910:CDS |
| CTAACGGCAGTGAAAATAAA+TGG | 0.269737 | 4_1:-61560256 | Msa0561910:CDS |
| GCTGTTTGTTTCCAAGGTTT+TGG | 0.282123 | 4_1:+61557147 | Msa0561900:CDS |
| TTCACTCCTGTGTCTTCTTC+AGG | 0.283118 | 4_1:+61559640 | None:intergenic |
| TTTGTAGTCCCATATCTTAA+AGG | 0.296103 | 4_1:+61560350 | None:intergenic |
| CATTCGAGTTGTAATTCATT+AGG | 0.305762 | 4_1:+61559664 | None:intergenic |
| TGTTGATCTAGACACGCTTT+TGG | 0.312822 | 4_1:+61559613 | None:intergenic |
| CTTAAAGGACAAGATTTAGA+AGG | 0.316078 | 4_1:+61560365 | None:intergenic |
| AGTCATTGCTCACGTTGATA+TGG | 0.325646 | 4_1:-61563940 | Msa0561910:CDS |
| GGAGAAGAAAGAAATAGATT+TGG | 0.351532 | 4_1:-61564030 | Msa0561910:five_prime_UTR |
| TCTGCATGCTAGAGCATATA+AGG | 0.354360 | 4_1:-61560558 | Msa0561910:intron |
| GTTGCACCCTCGTCACCTTC+AGG | 0.357433 | 4_1:-61559804 | Msa0561910:intron |
| TCAACATTGGCTTAATGAAC+TGG | 0.361658 | 4_1:-61560648 | Msa0561910:CDS |
| AATCAAGCCACCGCCTTTGT+AGG | 0.365717 | 4_1:+61563752 | None:intergenic |
| CTTCCCAAGAGCCATGGTTC+TGG | 0.370821 | 4_1:-61560987 | Msa0561910:CDS |
| TTGGAACTTAACCATGTTGC+AGG | 0.378869 | 4_1:+61557181 | Msa0561900:CDS |
| ATCCAGATTGAAATAGAGTT+AGG | 0.378895 | 4_1:+61560312 | None:intergenic |
| AGCAGGTAGTGAAAATTGTT+TGG | 0.383668 | 4_1:-61559695 | Msa0561910:intron |
| TTGCTTGCTGTTTGTTTCCA+AGG | 0.384323 | 4_1:+61557141 | Msa0561900:CDS |
| AATCTTGTCCTTTAAGATAT+GGG | 0.384366 | 4_1:-61560358 | Msa0561910:CDS |
| AAATAGATTTGGAGGGAAAA+GGG | 0.384551 | 4_1:-61564019 | Msa0561910:five_prime_UTR |
| TCGACCCTTGCGCGAAAGAA+TGG | 0.386927 | 4_1:+61563385 | None:intergenic |
| ATGGATTGCTTCTACGTTCA+AGG | 0.391815 | 4_1:-61563921 | Msa0561910:intron |
| AGCTATGAAGCTCGCAAATC+TGG | 0.392570 | 4_1:-61563723 | Msa0561910:CDS |
| GCCCTAACTCTATTTCAATC+TGG | 0.399449 | 4_1:-61560314 | Msa0561910:CDS |
| CTTGAACCAATTGAATTTGC+GGG | 0.399558 | 4_1:+61563568 | None:intergenic |
| GAAATAGATTTGGAGGGAAA+AGG | 0.400325 | 4_1:-61564020 | Msa0561910:five_prime_UTR |
| GTCTTCAAAGCTTGAGGCCC+AGG | 0.409170 | 4_1:+61560954 | None:intergenic |
| ATGATGCTAAAGAAGAAGTT+AGG | 0.411696 | 4_1:-61562060 | Msa0561910:CDS |
| TAAAACTTGCATCCTGAGTT+CGG | 0.414673 | 4_1:+61561970 | None:intergenic |
| GAGAAGCTACAACAACGTTA+TGG | 0.417449 | 4_1:-61561349 | Msa0561910:CDS |
| GGCACAACTGTTTGTTGTGC+AGG | 0.421149 | 4_1:+61561744 | None:intergenic |
| ACTTCCTTACAAAGTGATCT+TGG | 0.434353 | 4_1:-61561409 | Msa0561910:CDS |
| GATGCCAAGATCACTTTGTA+AGG | 0.435099 | 4_1:+61561405 | None:intergenic |
| GAAGAAAGAAATAGATTTGG+AGG | 0.441692 | 4_1:-61564027 | Msa0561910:five_prime_UTR |
| AAAAGCGTGTCTAGATCAAC+AGG | 0.442157 | 4_1:-61559611 | Msa0561910:intron |
| TTAGCTTTACCGCGTGCTAC+AGG | 0.443323 | 4_1:+61563543 | None:intergenic |
| GAAACAGCTTGGAGGAAAGC+TGG | 0.444488 | 4_1:-61561434 | Msa0561910:CDS |
| TAACGGCAGTGAAAATAAAT+GGG | 0.445670 | 4_1:-61560255 | Msa0561910:CDS |
| AGAAGCTACAACAACGTTAT+GGG | 0.445780 | 4_1:-61561348 | Msa0561910:CDS |
| GTTCAAACTTACAGATGGTA+TGG | 0.447373 | 4_1:+61560193 | None:intergenic |
| GAGAAAGCAACCAAGTTTAA+GGG | 0.456078 | 4_1:-61563805 | Msa0561910:CDS |
| AGCCTGCCCGCAAATTCAAT+TGG | 0.459720 | 4_1:-61563574 | Msa0561910:CDS |
| TTTCCAGAACCATGGCTCTT+GGG | 0.469924 | 4_1:+61560984 | None:intergenic |
| GCGAGAAGAGAGAGTTGTGA+TGG | 0.473469 | 4_1:-61563966 | Msa0561910:CDS |
| CTGCATTCCTGTATGTATTG+AGG | 0.473538 | 4_1:+61563520 | None:intergenic |
| GTAGGCAAGCCCCTTAAACT+TGG | 0.479601 | 4_1:+61563795 | None:intergenic |
| CTAAAGAAGAAGTTAGGAAG+TGG | 0.480127 | 4_1:-61562054 | Msa0561910:CDS |
| CAAACTGTTTCAGAGAAAGA+AGG | 0.486584 | 4_1:+61557114 | Msa0561900:CDS |
| ATAGATTTGGAGGGAAAAGG+GGG | 0.490195 | 4_1:-61564017 | Msa0561910:five_prime_UTR |
| CCTTCATTGTTGCCGAACTC+AGG | 0.490561 | 4_1:-61561982 | Msa0561910:CDS |
| AAGAAAAGCTACTAGCTTGT+GGG | 0.491514 | 4_1:-61562006 | Msa0561910:CDS |
| ACTTGAACCAATTGAATTTG+CGG | 0.506366 | 4_1:+61563567 | None:intergenic |
| CAATGACATTATCTACCGAT+TGG | 0.510895 | 4_1:+61559832 | None:intergenic |
| GCTTTCAGGAAACAGCTTGG+AGG | 0.510942 | 4_1:-61561442 | Msa0561910:intron |
| GTTTCCATTCTTTCGCGCAA+GGG | 0.511441 | 4_1:-61563389 | Msa0561910:CDS |
| GTGCCACATTCATCTGTTGA+AGG | 0.513413 | 4_1:-61561726 | Msa0561910:CDS |
| CTCAATACATACAGGAATGC+AGG | 0.515776 | 4_1:-61563519 | Msa0561910:CDS |
| CCTGAGTTCGGCAACAATGA+AGG | 0.516548 | 4_1:+61561982 | None:intergenic |
| CTGAAGTTCCTCCAAAACCT+TGG | 0.519653 | 4_1:-61557158 | Msa0561910:CDS |
| TTGGCTTTCAGGAAACAGCT+TGG | 0.521521 | 4_1:-61561445 | Msa0561910:intron |
| TAACATTGTTTGAGCAGCAT+CGG | 0.522683 | 4_1:+61563322 | None:intergenic |
| CTCGCAAATCTGGTGTCAAA+CGG | 0.523258 | 4_1:-61563713 | Msa0561910:intron |
| AAACAGCTTGGAGGAAAGCT+GGG | 0.523685 | 4_1:-61561433 | Msa0561910:CDS |
| ATAGAGTTAGGGCATCCTCT+TGG | 0.524492 | 4_1:+61560324 | None:intergenic |
| TGTTTCCATTCTTTCGCGCA+AGG | 0.525442 | 4_1:-61563390 | Msa0561910:CDS |
| AGCATTGCAGTACTTGGCTG+TGG | 0.527570 | 4_1:-61561055 | Msa0561910:intron |
| TTAAAGGACAAGATTTAGAA+GGG | 0.529814 | 4_1:+61560366 | None:intergenic |
| CGGTTCTTCATCAAACCAAT+CGG | 0.531477 | 4_1:-61559847 | Msa0561910:CDS |
| TCCAGATTGAAATAGAGTTA+GGG | 0.534381 | 4_1:+61560313 | None:intergenic |
| AACCAATTGAATTTGCGGGC+AGG | 0.538189 | 4_1:+61563572 | None:intergenic |
| TGCCACATTCATCTGTTGAA+GGG | 0.538597 | 4_1:-61561725 | Msa0561910:CDS |
| CTGACATGGATCAAAACAAA+CGG | 0.546133 | 4_1:-61560598 | Msa0561910:CDS |
| CAACATTGGCTTAATGAACT+GGG | 0.546144 | 4_1:-61560647 | Msa0561910:CDS |
| AATCAGCGGAGAAGAAGTTG+AGG | 0.548506 | 4_1:-61561018 | Msa0561910:CDS |
| AAGCTAACCTCAATACATAC+AGG | 0.551066 | 4_1:-61563527 | Msa0561910:CDS |
| AAGACAGTGAGGTTGATGTT+CGG | 0.551962 | 4_1:+61557068 | Msa0561900:CDS |
| AATAGATTTGGAGGGAAAAG+GGG | 0.554692 | 4_1:-61564018 | Msa0561910:five_prime_UTR |
| CAAGAAAAGCTACTAGCTTG+TGG | 0.558456 | 4_1:-61562007 | Msa0561910:CDS |
| AACGTTATGGGATCAATACT+GGG | 0.560625 | 4_1:-61561336 | Msa0561910:intron |
| TGAAAGCGTGGAACATGTTG+AGG | 0.566017 | 4_1:-61563285 | Msa0561910:CDS |
| GCGATTGTCTTCAAAGCTTG+AGG | 0.571750 | 4_1:+61560948 | None:intergenic |
| TGGTTTGATGAAGAACCGTA+TGG | 0.579040 | 4_1:+61559852 | None:intergenic |
| TTCAAACTTACAGATGGTAT+GGG | 0.579618 | 4_1:+61560194 | None:intergenic |
| TTTGATCCATGTCAGAGTCA+AGG | 0.580710 | 4_1:+61560606 | None:intergenic |
| AGAAAGCAACCAAGTTTAAG+GGG | 0.588922 | 4_1:-61563804 | Msa0561910:CDS |
| ATCAGCGGAGAAGAAGTTGA+GGG | 0.589659 | 4_1:-61561017 | Msa0561910:CDS |
| TAGCTTTACCGCGTGCTACA+GGG | 0.589812 | 4_1:+61563544 | None:intergenic |
| GTTCAGTACAACTCCTACAA+AGG | 0.590603 | 4_1:-61563765 | Msa0561910:CDS |
| TTCAGTGAGACATTTCCATA+CGG | 0.594837 | 4_1:-61559867 | Msa0561910:CDS |
| AAGAAAGAAATAGATTTGGA+GGG | 0.595679 | 4_1:-61564026 | Msa0561910:five_prime_UTR |
| TTGTACTGAACAACTGCAGT+AGG | 0.601929 | 4_1:+61563777 | None:intergenic |
| TACAACTCCTACAAAGGCGG+TGG | 0.603301 | 4_1:-61563759 | Msa0561910:CDS |
| GAACTTAACCATGTTGCAGG+TGG | 0.608004 | 4_1:+61557184 | Msa0561900:CDS |
| CGACTACTTCCCAAGAGCCA+TGG | 0.611151 | 4_1:-61560993 | Msa0561910:CDS |
| TAGATTTGGAGGGAAAAGGG+GGG | 0.611275 | 4_1:-61564016 | Msa0561910:five_prime_UTR |
| CAACATGTCCACCTGCAACA+TGG | 0.612887 | 4_1:-61557192 | Msa0561910:CDS |
| GGAAACTCCTCCTGAAAGCG+TGG | 0.613918 | 4_1:-61563297 | Msa0561910:CDS |
| CATGTTGCAGGTGGACATGT+TGG | 0.614636 | 4_1:+61557193 | Msa0561900:CDS |
| TGAACGCCTTGACTCTGACA+TGG | 0.615794 | 4_1:-61560612 | Msa0561910:CDS |
| AATGCGTGGCGATGAAGCAA+AGG | 0.616345 | 4_1:-61563598 | Msa0561910:CDS |
| ATACAGGAATGCAGGTTCAG+AGG | 0.618464 | 4_1:-61563511 | Msa0561910:intron |
| TCTAAAACCTGAAGGTGACG+AGG | 0.619107 | 4_1:+61559797 | None:intergenic |
| ACATGTTCCACGCTTTCAGG+AGG | 0.622571 | 4_1:+61563290 | None:intergenic |
| GATCTTGGCATCAACACCGT+TGG | 0.625005 | 4_1:-61561394 | Msa0561910:CDS |
| GAGAGAGAGAGGGATGCGGG+TGG | 0.627412 | 4_1:-61563988 | Msa0561910:exon |
| TTGTACAACTCTAAGACTAA+CGG | 0.629649 | 4_1:-61560272 | Msa0561910:CDS |
| AGAAAAGCTACTAGCTTGTG+GGG | 0.656519 | 4_1:-61562005 | Msa0561910:CDS |
| CTAAAACCTGAAGGTGACGA+GGG | 0.662874 | 4_1:+61559798 | None:intergenic |
| AAACTGAAGCAGATCACCAA+CGG | 0.665670 | 4_1:+61561378 | None:intergenic |
| TTGTTTGAGCAGCATCGGTG+AGG | 0.666748 | 4_1:+61563327 | None:intergenic |
| TGAGAGAGCTTCAATTGATG+AGG | 0.669380 | 4_1:-61563360 | Msa0561910:CDS |
| AACAGCTTGGAGGAAAGCTG+GGG | 0.669741 | 4_1:-61561432 | Msa0561910:CDS |
| TCAAACTTACAGATGGTATG+GGG | 0.673402 | 4_1:+61560195 | None:intergenic |
| AACCCTTCAACAGATGAATG+TGG | 0.684076 | 4_1:+61561723 | None:intergenic |
| AACGGCAGTGAAAATAAATG+GGG | 0.684334 | 4_1:-61560254 | Msa0561910:CDS |
| GTTCAAGTCCCTGTAGCACG+CGG | 0.689011 | 4_1:-61563552 | Msa0561910:CDS |
| TCAGCGGAGAAGAAGTTGAG+GGG | 0.689369 | 4_1:-61561016 | Msa0561910:CDS |
| TGGCTGTGGAATATTGCGAG+AGG | 0.692385 | 4_1:-61561041 | Msa0561910:CDS |
| CAGTACAACTCCTACAAAGG+CGG | 0.700106 | 4_1:-61563762 | Msa0561910:CDS |
| GAGGAAATCAAAAGACAGTG+AGG | 0.707672 | 4_1:+61557057 | Msa0561900:CDS |
| AATATTGCGAGAGGAATCAG+CGG | 0.711561 | 4_1:-61561032 | Msa0561910:CDS |
| GAATGTCCTGAAGAAGACAC+AGG | 0.726806 | 4_1:-61559646 | Msa0561910:CDS |
| TGGGACTACAAAGATCCAAG+AGG | 0.730216 | 4_1:-61560339 | Msa0561910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTAATTAAATTAAATTG+GGG | + | chr4_1:61557251-61557270 | Msa0561900:intron | 10.0% |
| !!! | AATTTTTTTGATTTTTATGT+TGG | - | chr4_1:61560321-61560340 | Msa0561910:CDS | 10.0% |
| !!! | TAAGCTTTTAAAATTATTTT+AGG | + | chr4_1:61562742-61562761 | None:intergenic | 10.0% |
| !!! | AATTTAATTTGTGAAAATTT+TGG | - | chr4_1:61562983-61563002 | Msa0561910:intron | 10.0% |
| !!! | ATTTAATTTGTGAAAATTTT+GGG | - | chr4_1:61562984-61563003 | Msa0561910:intron | 10.0% |
| !! | TTAAAAAAAATCAAAATTGA+AGG | - | chr4_1:61563073-61563092 | Msa0561910:intron | 10.0% |
| !!! | AATTTTATAAAGTATTTACT+TGG | - | chr4_1:61563844-61563863 | Msa0561910:intron | 10.0% |
| !!! | TTAAAGTTATTTGTTTTAGT+TGG | - | chr4_1:61557950-61557969 | Msa0561910:intron | 15.0% |
| !! | ATAAAATTCAGATTTAACAT+TGG | + | chr4_1:61558064-61558083 | None:intergenic | 15.0% |
| !!! | TTATTTGTATGGTTTTTTAA+GGG | + | chr4_1:61558686-61558705 | None:intergenic | 15.0% |
| !!! | TTTATTTGTATGGTTTTTTA+AGG | + | chr4_1:61558687-61558706 | None:intergenic | 15.0% |
| !! | AAAACCATACAAATAAATAA+AGG | - | chr4_1:61558690-61558709 | Msa0561910:intron | 15.0% |
| !!! | ATAACCTTTATTTATTTGTA+TGG | + | chr4_1:61558697-61558716 | None:intergenic | 15.0% |
| !! | TTTATGAAGCATAATAAAAT+AGG | - | chr4_1:61558720-61558739 | Msa0561910:intron | 15.0% |
| !!! | ATTTAAAATGCTTTTTATTC+AGG | - | chr4_1:61559012-61559031 | Msa0561910:intron | 15.0% |
| !!! | TTATTTTTCTTTTATTTGTG+TGG | - | chr4_1:61561115-61561134 | Msa0561910:intron | 15.0% |
| !! | AAAAATTCATATACTGTAAA+TGG | - | chr4_1:61561566-61561585 | Msa0561910:intron | 15.0% |
| !! | TCATTTAGCATATAAAATAA+TGG | - | chr4_1:61561921-61561940 | Msa0561910:intron | 15.0% |
| !! | TTAAAAGCTTATAAAATTCA+TGG | - | chr4_1:61562751-61562770 | Msa0561910:intron | 15.0% |
| !!! | AATTTGATTATTTTTTTGGT+TGG | - | chr4_1:61562921-61562940 | Msa0561910:intron | 15.0% |
| !!! | TTTTTTTGAGTTAGTTTAAT+CGG | + | chr4_1:61563104-61563123 | None:intergenic | 15.0% |
| !! | TAGATTTATTACATTTGATT+TGG | + | chr4_1:61563818-61563837 | None:intergenic | 15.0% |
| !!! | TATTCACTCATGTTAAATTT+TGG | - | chr4_1:61557668-61557687 | Msa0561910:intron | 20.0% |
| !!! | TTGGTGATTTTGAATTTTAA+AGG | - | chr4_1:61557687-61557706 | Msa0561910:intron | 20.0% |
| !! | TGATTGTTAATTTCAAAAGT+GGG | - | chr4_1:61557915-61557934 | Msa0561910:intron | 20.0% |
| !!! | TAAATCTGAATTTTATTGTG+TGG | - | chr4_1:61558068-61558087 | Msa0561910:intron | 20.0% |
| !! | TCACTAAATTGTTATCTATA+TGG | + | chr4_1:61558123-61558142 | None:intergenic | 20.0% |
| !!! | TTGTCTTTGTTTTTAAGATA+TGG | + | chr4_1:61558167-61558186 | None:intergenic | 20.0% |
| !! | TGATATATGACATAACATTA+TGG | + | chr4_1:61558244-61558263 | None:intergenic | 20.0% |
| !!! | TTTGAAGTTTATGAATCAAA+TGG | - | chr4_1:61559518-61559537 | Msa0561910:intron | 20.0% |
| !!! | TTTTCCTTTACAAAAAAACA+AGG | - | chr4_1:61559548-61559567 | Msa0561910:intron | 20.0% |
| !!! | GATCTTAGTAATTTTAACAT+GGG | + | chr4_1:61559597-61559616 | None:intergenic | 20.0% |
| !!! | TGATCTTAGTAATTTTAACA+TGG | + | chr4_1:61559598-61559617 | None:intergenic | 20.0% |
| !!! | TTATTTGTGTTTTAACATAG+AGG | - | chr4_1:61559791-61559810 | Msa0561910:intron | 20.0% |
| !! | CGTTTATTAATTATAGTATG+TGG | - | chr4_1:61561031-61561050 | Msa0561910:CDS | 20.0% |
| !! | AATATCATTATGTGATCTAA+AGG | + | chr4_1:61561162-61561181 | None:intergenic | 20.0% |
| !!! | GATTTTTTGATAGGTTTTAA+TGG | - | chr4_1:61561638-61561657 | Msa0561910:intron | 20.0% |
| !! | TAAAACCTTTCAAAATCTAT+TGG | + | chr4_1:61561664-61561683 | None:intergenic | 20.0% |
| !!! | TAGATTTTGAAAGGTTTTAA+TGG | - | chr4_1:61561665-61561684 | Msa0561910:intron | 20.0% |
| !! | AAATAATCAAATTGCACAAT+GGG | + | chr4_1:61562914-61562933 | None:intergenic | 20.0% |
| !! | AAAATAATCAAATTGCACAA+TGG | + | chr4_1:61562915-61562934 | None:intergenic | 20.0% |
| !!! | GTGCAATTTGATTATTTTTT+TGG | - | chr4_1:61562917-61562936 | Msa0561910:intron | 20.0% |
| !! | TTGGTTATATATTAACTATG+AGG | + | chr4_1:61563799-61563818 | None:intergenic | 20.0% |
| ! | AAGAAAGAAATAGATTTGGA+GGG | - | chr4_1:61557075-61557094 | Msa0561910:CDS | 25.0% |
| ! | TCAAAATGGTTTAATCGAAT+AGG | + | chr4_1:61557416-61557435 | Msa0561900:CDS | 25.0% |
| ! | ATTTGAATTGAGGATCAAAA+TGG | + | chr4_1:61557430-61557449 | None:intergenic | 25.0% |
| ! | GTGATTGTTAATTTCAAAAG+TGG | - | chr4_1:61557914-61557933 | Msa0561910:intron | 25.0% |
| !!! | AAGTTATTTGTTTTAGTTGG+CGG | - | chr4_1:61557953-61557972 | Msa0561910:intron | 25.0% |
| ! | TAACAATTTAGTGAAAGCTT+AGG | - | chr4_1:61558129-61558148 | Msa0561910:intron | 25.0% |
| !!! | ATTTTTGAATAAAGAGCATG+TGG | - | chr4_1:61558985-61559004 | Msa0561910:intron | 25.0% |
| !!! | AAAATGCTTTTTATTCAGGA+TGG | - | chr4_1:61559016-61559035 | Msa0561910:intron | 25.0% |
| ! | GCACTAATGTTATTATTGAA+AGG | - | chr4_1:61559433-61559452 | Msa0561910:intron | 25.0% |
| !!! | ACAACCTTGTTTTTTTGTAA+AGG | + | chr4_1:61559555-61559574 | None:intergenic | 25.0% |
| ! | AAATATTGTCATCCTAGTTA+AGG | + | chr4_1:61559912-61559931 | None:intergenic | 25.0% |
| ! | AATGCTGTAAAAGTTAAAAC+AGG | + | chr4_1:61560032-61560051 | None:intergenic | 25.0% |
| !!! | AAACTTCTAGCACTTTATTT+TGG | - | chr4_1:61560206-61560225 | Msa0561910:CDS | 25.0% |
| !!! | GTTTTGTTGATTAAGATTCA+AGG | - | chr4_1:61560345-61560364 | Msa0561910:CDS | 25.0% |
| ! | TTGATTAAGATTCAAGGATT+GGG | - | chr4_1:61560351-61560370 | Msa0561910:CDS | 25.0% |
| !!! | TTCATTTTTTTCTTGCAGAA+AGG | - | chr4_1:61560688-61560707 | Msa0561910:intron | 25.0% |
| !!! | TCATTTTTTTCTTGCAGAAA+GGG | - | chr4_1:61560689-61560708 | Msa0561910:intron | 25.0% |
| ! | TTAAAGGACAAGATTTAGAA+GGG | + | chr4_1:61560738-61560757 | None:intergenic | 25.0% |
| !!! | AAATCTTGTCCTTTAAGATA+TGG | - | chr4_1:61560742-61560761 | Msa0561910:intron | 25.0% |
| !!! | AATCTTGTCCTTTAAGATAT+GGG | - | chr4_1:61560743-61560762 | Msa0561910:intron | 25.0% |
| ! | ATTGAACTTCATTTGTATCT+AGG | - | chr4_1:61561188-61561207 | Msa0561910:intron | 25.0% |
| ! | TTGAACTTCATTTGTATCTA+GGG | - | chr4_1:61561189-61561208 | Msa0561910:intron | 25.0% |
| ! | TAGATCAACAGGTATATTAA+TGG | - | chr4_1:61561501-61561520 | Msa0561910:intron | 25.0% |
| ! | ATAACAGAATTTCTCTTACA+CGG | + | chr4_1:61561863-61561882 | None:intergenic | 25.0% |
| ! | CTGTTACAAAACAAACTTAA+AGG | + | chr4_1:61562607-61562626 | None:intergenic | 25.0% |
| !!! | AAGTTTGTTTTGTAACAGAT+AGG | - | chr4_1:61561998-61562017 | Msa0561910:CDS | 25.0% |
| ! | GTTACAAACATCAAACTTAA+AGG | + | chr4_1:61562025-61562044 | None:intergenic | 25.0% |
| ! | GTTTGATGTTTGTAACATAT+AGG | - | chr4_1:61562029-61562048 | Msa0561910:CDS | 25.0% |
| ! | CTGTTACAAAACAAACTTAA+AGG | + | chr4_1:61562607-61562626 | None:intergenic | 25.0% |
| !!! | AAGTTTGTTTTGTAACAGAT+AGG | - | chr4_1:61561998-61562017 | Msa0561910:CDS | 25.0% |
| ! | CTGATTCTTCAAAAAAAACT+GGG | + | chr4_1:61562189-61562208 | None:intergenic | 25.0% |
| ! | GAGTTGAGTATATTTATCAT+CGG | + | chr4_1:61562334-61562353 | None:intergenic | 25.0% |
| !! | AGCTTTGGTATGAATAAAAA+TGG | - | chr4_1:61562445-61562464 | Msa0561910:intron | 25.0% |
| ! | TATGAATAAAAATGGAGTCA+GGG | - | chr4_1:61562453-61562472 | Msa0561910:intron | 25.0% |
| !!! | AAGTTTGTTTTGTAACAGAT+AGG | + | chr4_1:61561998-61562017 | None:intergenic | 25.0% |
| ! | CTGTTACAAAACAAACTTAA+AGG | - | chr4_1:61562607-61562626 | Msa0561910:intron | 25.0% |
| !!! | AAGTTTGTTTTGTAACAGAT+AGG | + | chr4_1:61561998-61562017 | None:intergenic | 25.0% |
| ! | CTGTTACAAAACAAACTTAA+AGG | - | chr4_1:61562607-61562626 | Msa0561910:intron | 25.0% |
| ! | GAAATTCAACAGAATTTGAA+GGG | - | chr4_1:61562773-61562792 | Msa0561910:intron | 25.0% |
| !!! | AATTTGTGAAAATTTTGGGT+AGG | - | chr4_1:61562988-61563007 | Msa0561910:intron | 25.0% |
| !!! | GTTTTGACTTTTATGTATGA+TGG | - | chr4_1:61563025-61563044 | Msa0561910:intron | 25.0% |
| !!! | ATGTATTTGCTATTATAGAG+AGG | - | chr4_1:61563142-61563161 | Msa0561910:intron | 25.0% |
| !!! | TGTATTTGCTATTATAGAGA+GGG | - | chr4_1:61563143-61563162 | Msa0561910:intron | 25.0% |
| ! | ATATTTCATTGACATGAAGT+TGG | + | chr4_1:61563187-61563206 | None:intergenic | 25.0% |
| ! | TGAAATATCTCTCATAGAAA+TGG | - | chr4_1:61563199-61563218 | Msa0561910:intron | 25.0% |
| ! | TTATTTGCCAAAACATGAAA+AGG | - | chr4_1:61563264-61563283 | Msa0561910:CDS | 25.0% |
| !! | TACTTTACCTTTTCATGTTT+TGG | + | chr4_1:61563274-61563293 | None:intergenic | 25.0% |
| !!! | ATAAGCTTGCTCTTTTTTTT+TGG | + | chr4_1:61563376-61563395 | None:intergenic | 25.0% |
| !!! | TTCTTTTTTATGGTACTTTG+TGG | + | chr4_1:61563508-61563527 | None:intergenic | 25.0% |
| ! | GTTATAGTGATACTTTCATA+GGG | + | chr4_1:61563581-61563600 | None:intergenic | 25.0% |
| ! | AGTTATAGTGATACTTTCAT+AGG | + | chr4_1:61563582-61563601 | None:intergenic | 25.0% |
| ! | AATGTCAGTACTAATTAATC+TGG | - | chr4_1:61563635-61563654 | Msa0561910:intron | 25.0% |
| GGAGAAGAAAGAAATAGATT+TGG | - | chr4_1:61557071-61557090 | Msa0561910:CDS | 30.0% | |
| GAAGAAAGAAATAGATTTGG+AGG | - | chr4_1:61557074-61557093 | Msa0561910:CDS | 30.0% | |
| AAATAGATTTGGAGGGAAAA+GGG | - | chr4_1:61557082-61557101 | Msa0561910:CDS | 30.0% | |
| CTAAACACACATTTGAATTG+AGG | + | chr4_1:61557440-61557459 | None:intergenic | 30.0% | |
| ACTTGAACCAATTGAATTTG+CGG | + | chr4_1:61557537-61557556 | None:intergenic | 30.0% | |
| !! | GAGGTATTTCTTTTATCATC+AGG | - | chr4_1:61557609-61557628 | Msa0561910:intron | 30.0% |
| ACTGAAAATGCAAGACATTT+AGG | + | chr4_1:61557896-61557915 | None:intergenic | 30.0% | |
| TTGTTAATTTCAAAAGTGGG+TGG | - | chr4_1:61557918-61557937 | Msa0561910:intron | 30.0% | |
| TGTTAATTTCAAAAGTGGGT+GGG | - | chr4_1:61557919-61557938 | Msa0561910:intron | 30.0% | |
| ATGAAAAATTGAATGCCTCA+TGG | - | chr4_1:61558025-61558044 | Msa0561910:intron | 30.0% | |
| ! | GACTTGTAGATTTTGTAGTA+TGG | + | chr4_1:61558425-61558444 | None:intergenic | 30.0% |
| ! | TAGAAAATATGGTGGAAACT+CGG | + | chr4_1:61558476-61558495 | None:intergenic | 30.0% |
| ! | TCCACCATATTTTCTATGAT+CGG | - | chr4_1:61558480-61558499 | Msa0561910:intron | 30.0% |
| CAATATTACAGAGAGAATCT+GGG | + | chr4_1:61558511-61558530 | None:intergenic | 30.0% | |
| ACAATATTACAGAGAGAATC+TGG | + | chr4_1:61558512-61558531 | None:intergenic | 30.0% | |
| !! | AGAATGATGTGTTTGATTTG+TGG | + | chr4_1:61558563-61558582 | None:intergenic | 30.0% |
| !!! | CGCTTATTTTATTCTTGTGT+TGG | - | chr4_1:61558594-61558613 | Msa0561910:intron | 30.0% |
| ! | TCTTTTGCCAAACAAATTCA+TGG | - | chr4_1:61558929-61558948 | Msa0561910:intron | 30.0% |
| ! | CTTTTGCCAAACAAATTCAT+GGG | - | chr4_1:61558930-61558949 | Msa0561910:intron | 30.0% |
| ! | TTTTGCCAAACAAATTCATG+GGG | - | chr4_1:61558931-61558950 | Msa0561910:intron | 30.0% |
| ATGATGCTAAAGAAGAAGTT+AGG | - | chr4_1:61559041-61559060 | Msa0561910:intron | 30.0% | |
| !! | AAGGTGTTGTAAGAAATTTG+GGG | + | chr4_1:61559235-61559254 | None:intergenic | 30.0% |
| !! | GAAGGTGTTGTAAGAAATTT+GGG | + | chr4_1:61559236-61559255 | None:intergenic | 30.0% |
| CTACAACTTTACAAACATCA+AGG | + | chr4_1:61559271-61559290 | None:intergenic | 30.0% | |
| TGATGTTTGTAAAGTTGTAG+TGG | - | chr4_1:61559271-61559290 | Msa0561910:intron | 30.0% | |
| ! | GTGCGTTACATTTTCTTTAT+CGG | + | chr4_1:61559417-61559436 | None:intergenic | 30.0% |
| ! | TTCAAAAGAAAGTACATTCG+AGG | + | chr4_1:61559504-61559523 | None:intergenic | 30.0% |
| GTGTGATATTGAAGAAAACT+TGG | - | chr4_1:61559637-61559656 | Msa0561910:CDS | 30.0% | |
| TAACATAGAGGAACATAGTT+TGG | - | chr4_1:61559803-61559822 | Msa0561910:intron | 30.0% | |
| GAGATCGCAAAAATAAAATC+AGG | + | chr4_1:61559837-61559856 | None:intergenic | 30.0% | |
| ATGCATGCATATTTACGAAT+TGG | + | chr4_1:61559943-61559962 | None:intergenic | 30.0% | |
| GTTGATTAAGATTCAAGGAT+TGG | - | chr4_1:61560350-61560369 | Msa0561910:CDS | 30.0% | |
| !!! | ACATCTAGTTTTTTTCCTTC+AGG | - | chr4_1:61560429-61560448 | Msa0561910:intron | 30.0% |
| TCACTCAAAGATAGTGAAAA+TGG | + | chr4_1:61560618-61560637 | None:intergenic | 30.0% | |
| !!! | CATTTTTTTCTTGCAGAAAG+GGG | - | chr4_1:61560690-61560709 | Msa0561910:intron | 30.0% |
| CTTAAAGGACAAGATTTAGA+AGG | + | chr4_1:61560739-61560758 | None:intergenic | 30.0% | |
| TTTGTAGTCCCATATCTTAA+AGG | + | chr4_1:61560754-61560773 | None:intergenic | 30.0% | |
| TCCAGATTGAAATAGAGTTA+GGG | + | chr4_1:61560791-61560810 | None:intergenic | 30.0% | |
| ATCCAGATTGAAATAGAGTT+AGG | + | chr4_1:61560792-61560811 | None:intergenic | 30.0% | |
| !!! | ATCTGGATTACGTGATTTTT+TGG | - | chr4_1:61560804-61560823 | Msa0561910:intron | 30.0% |
| !!! | TCTGGATTACGTGATTTTTT+GGG | - | chr4_1:61560805-61560824 | Msa0561910:intron | 30.0% |
| !! | TTGTACAACTCTAAGACTAA+CGG | - | chr4_1:61560829-61560848 | Msa0561910:intron | 30.0% |
| TAACGGCAGTGAAAATAAAT+GGG | - | chr4_1:61560846-61560865 | Msa0561910:intron | 30.0% | |
| TTCAAACTTACAGATGGTAT+GGG | + | chr4_1:61560910-61560929 | None:intergenic | 30.0% | |
| TTGGATTACTAACTTGATTG+TGG | - | chr4_1:61560934-61560953 | Msa0561910:intron | 30.0% | |
| TGAACTTCATTTGTATCTAG+GGG | - | chr4_1:61561190-61561209 | Msa0561910:intron | 30.0% | |
| ATTCCACTGTAATTTGATTG+AGG | - | chr4_1:61561372-61561391 | Msa0561910:CDS | 30.0% | |
| !! | CATTCGAGTTGTAATTCATT+AGG | + | chr4_1:61561440-61561459 | None:intergenic | 30.0% |
| ! | GGTTTTTACAATCATGATGA+TGG | - | chr4_1:61561587-61561606 | Msa0561910:intron | 30.0% |
| !!! | AGGTGGATAGATTTTTTGAT+AGG | - | chr4_1:61561629-61561648 | Msa0561910:intron | 30.0% |
| ! | AATGGCCAATAGATTTTGAA+AGG | - | chr4_1:61561656-61561675 | Msa0561910:intron | 30.0% |
| !! | AAGGTTTTAATGGCTTATAC+TGG | - | chr4_1:61561675-61561694 | Msa0561910:intron | 30.0% |
| !! | AGGTTTTAATGGCTTATACT+GGG | - | chr4_1:61561676-61561695 | Msa0561910:intron | 30.0% |
| CTTAAAAAGACATTAGCACT+TGG | - | chr4_1:61561735-61561754 | Msa0561910:CDS | 30.0% | |
| TATGTTAAGAGAAATGCAGA+AGG | - | chr4_1:61561781-61561800 | Msa0561910:intron | 30.0% | |
| ATGTTAAGAGAAATGCAGAA+GGG | - | chr4_1:61561782-61561801 | Msa0561910:intron | 30.0% | |
| GTTACAAACGTCAAACTTAA+AGG | + | chr4_1:61562638-61562657 | None:intergenic | 30.0% | |
| AAAAAAACTGGGTGTAGTAA+AGG | + | chr4_1:61562178-61562197 | None:intergenic | 30.0% | |
| CCTGATTCTTCAAAAAAAAC+TGG | + | chr4_1:61562190-61562209 | None:intergenic | 30.0% | |
| !!! | CCAGTTTTTTTTGAAGAATC+AGG | - | chr4_1:61562187-61562206 | Msa0561910:intron | 30.0% |
| AATAATGCTGGTATTACACT+TGG | - | chr4_1:61562399-61562418 | Msa0561910:intron | 30.0% | |
| GTATGAATAAAAATGGAGTC+AGG | - | chr4_1:61562452-61562471 | Msa0561910:intron | 30.0% | |
| GTTACAAACGTCAAACTTAA+AGG | - | chr4_1:61562638-61562657 | Msa0561910:intron | 30.0% | |
| GTTTGACGTTTGTAACATAT+AGG | + | chr4_1:61561969-61561988 | None:intergenic | 30.0% | |
| GTTACAAACGTCAAACTTAA+AGG | - | chr4_1:61562638-61562657 | Msa0561910:intron | 30.0% | |
| GGAAATTCAACAGAATTTGA+AGG | - | chr4_1:61562772-61562791 | Msa0561910:intron | 30.0% | |
| !!! | AGTTTTGAGTACAAGAAAGA+AGG | - | chr4_1:61562946-61562965 | Msa0561910:intron | 30.0% |
| !! | TTTTATGTATGATGGAACGA+AGG | - | chr4_1:61563033-61563052 | Msa0561910:intron | 30.0% |
| !! | GTATTTGCTATTATAGAGAG+GGG | - | chr4_1:61563144-61563163 | Msa0561910:intron | 30.0% |
| ATCTCTCATAGAAATGGAAA+CGG | - | chr4_1:61563205-61563224 | Msa0561910:intron | 30.0% | |
| CGGCAATATTTGTAATTTCA+AGG | - | chr4_1:61563225-61563244 | Msa0561910:intron | 30.0% | |
| !! | TACTTTAGTTTAGCTTTAGC+AGG | + | chr4_1:61563338-61563357 | None:intergenic | 30.0% |
| !!! | CTTTGCGTCTTTCTTTTTTA+TGG | + | chr4_1:61563518-61563537 | None:intergenic | 30.0% |
| GAAATAGATTTGGAGGGAAA+AGG | - | chr4_1:61557081-61557100 | Msa0561910:CDS | 35.0% | |
| AATAGATTTGGAGGGAAAAG+GGG | - | chr4_1:61557083-61557102 | Msa0561910:CDS | 35.0% | |
| ! | TAGGGTTTCACAATCTTTTC+CGG | - | chr4_1:61557207-61557226 | Msa0561910:CDS | 35.0% |
| GAAGTTGAAATTTACAGTGC+CGG | + | chr4_1:61557229-61557248 | Msa0561900:intron | 35.0% | |
| ! | GTAATGTTACTTGATTGCAG+TGG | - | chr4_1:61557269-61557288 | Msa0561910:intron | 35.0% |
| AGAGAAAGCAACCAAGTTTA+AGG | - | chr4_1:61557295-61557314 | Msa0561910:intron | 35.0% | |
| GAGAAAGCAACCAAGTTTAA+GGG | - | chr4_1:61557296-61557315 | Msa0561910:intron | 35.0% | |
| AGAAAGCAACCAAGTTTAAG+GGG | - | chr4_1:61557297-61557316 | Msa0561910:intron | 35.0% | |
| !! | TTTGTTTTCAGTTCAATGCG+TGG | - | chr4_1:61557489-61557508 | Msa0561910:intron | 35.0% |
| CTTGAACCAATTGAATTTGC+GGG | + | chr4_1:61557536-61557555 | None:intergenic | 35.0% | |
| AAGCTAACCTCAATACATAC+AGG | - | chr4_1:61557574-61557593 | Msa0561910:intron | 35.0% | |
| TAACATTGTTTGAGCAGCAT+CGG | + | chr4_1:61557782-61557801 | None:intergenic | 35.0% | |
| TGCTGCTCAAACAATGTTAA+TGG | - | chr4_1:61557783-61557802 | Msa0561910:intron | 35.0% | |
| ! | AGTTCTCAAGTCACATGTTT+TGG | - | chr4_1:61557843-61557862 | Msa0561910:intron | 35.0% |
| ! | GTTCTCAAGTCACATGTTTT+GGG | - | chr4_1:61557844-61557863 | Msa0561910:intron | 35.0% |
| ! | TTCTCAAGTCACATGTTTTG+GGG | - | chr4_1:61557845-61557864 | Msa0561910:intron | 35.0% |
| !!! | TGTTTTGGGGCTTCAAATTA+AGG | - | chr4_1:61557858-61557877 | Msa0561910:intron | 35.0% |
| ACCGATCATAGAAAATATGG+TGG | + | chr4_1:61558484-61558503 | None:intergenic | 35.0% | |
| !! | AGCACCGATCATAGAAAATA+TGG | + | chr4_1:61558487-61558506 | None:intergenic | 35.0% |
| AGACTAGACGATATAGGTTT+AGG | + | chr4_1:61558538-61558557 | None:intergenic | 35.0% | |
| ! | AGAAGTATAGCTTGAGACAT+GGG | + | chr4_1:61558862-61558881 | None:intergenic | 35.0% |
| TAAGCTAATGAAGCGTATCA+CGG | + | chr4_1:61558895-61558914 | None:intergenic | 35.0% | |
| TTTGCCAAACAAATTCATGG+GGG | - | chr4_1:61558932-61558951 | Msa0561910:intron | 35.0% | |
| CTAAAGAAGAAGTTAGGAAG+TGG | - | chr4_1:61559047-61559066 | Msa0561910:intron | 35.0% | |
| ! | AAGTTAGGAAGTGGATTTGT+AGG | - | chr4_1:61559056-61559075 | Msa0561910:intron | 35.0% |
| ! | AAGAAAAGCTACTAGCTTGT+GGG | - | chr4_1:61559095-61559114 | Msa0561910:intron | 35.0% |
| TAAAACTTGCATCCTGAGTT+CGG | + | chr4_1:61559134-61559153 | None:intergenic | 35.0% | |
| ! | TGCCTTATTATGAGCAATAC+CGG | + | chr4_1:61559182-61559201 | None:intergenic | 35.0% |
| GCGTAATTATAAACAAGCCA+AGG | + | chr4_1:61559213-61559232 | None:intergenic | 35.0% | |
| !! | GGAAGGTGTTGTAAGAAATT+TGG | + | chr4_1:61559237-61559256 | None:intergenic | 35.0% |
| TTTCTTACAACACCTTCCTT+AGG | - | chr4_1:61559239-61559258 | Msa0561910:intron | 35.0% | |
| ! | TTGAAGAAAACTTGGCTTTC+AGG | - | chr4_1:61559645-61559664 | Msa0561910:CDS | 35.0% |
| ACTTCCTTACAAAGTGATCT+TGG | - | chr4_1:61559692-61559711 | Msa0561910:CDS | 35.0% | |
| AGAAGCTACAACAACGTTAT+GGG | - | chr4_1:61559753-61559772 | Msa0561910:intron | 35.0% | |
| AACGTTATGGGATCAATACT+GGG | - | chr4_1:61559765-61559784 | Msa0561910:intron | 35.0% | |
| !!! | TGCGATCTCATGTTTTTAGT+AGG | - | chr4_1:61559848-61559867 | Msa0561910:CDS | 35.0% |
| CTGCATGTATTACCTTAACT+AGG | - | chr4_1:61559897-61559916 | Msa0561910:intron | 35.0% | |
| ! | TTTTACAGCATTGCAGTACT+TGG | - | chr4_1:61560040-61560059 | Msa0561910:intron | 35.0% |
| ! | GAAATGTTTTTCCAGAACCA+TGG | + | chr4_1:61560128-61560147 | None:intergenic | 35.0% |
| !! | GTTCTGGAAAAACATTTCCT+GGG | - | chr4_1:61560130-61560149 | Msa0561910:intron | 35.0% |
| ! | CCTTTGAGAAACTAAGGATT+GGG | + | chr4_1:61560272-61560291 | None:intergenic | 35.0% |
| ! | ACCTTTGAGAAACTAAGGAT+TGG | + | chr4_1:61560273-61560292 | None:intergenic | 35.0% |
| CTTAGTTTCTCAAAGGTCTT+GGG | - | chr4_1:61560276-61560295 | Msa0561910:CDS | 35.0% | |
| !! | TTTTCCTTCAGGTTCAACAT+TGG | - | chr4_1:61560440-61560459 | Msa0561910:intron | 35.0% |
| !! | TCAACATTGGCTTAATGAAC+TGG | - | chr4_1:61560453-61560472 | Msa0561910:intron | 35.0% |
| !! | CAACATTGGCTTAATGAACT+GGG | - | chr4_1:61560454-61560473 | Msa0561910:intron | 35.0% |
| CTGACATGGATCAAAACAAA+CGG | - | chr4_1:61560503-61560522 | Msa0561910:intron | 35.0% | |
| CTAACGGCAGTGAAAATAAA+TGG | - | chr4_1:61560845-61560864 | Msa0561910:intron | 35.0% | |
| AACGGCAGTGAAAATAAATG+GGG | - | chr4_1:61560847-61560866 | Msa0561910:intron | 35.0% | |
| TCAAACTTACAGATGGTATG+GGG | + | chr4_1:61560909-61560928 | None:intergenic | 35.0% | |
| GTTCAAACTTACAGATGGTA+TGG | + | chr4_1:61560911-61560930 | None:intergenic | 35.0% | |
| AAGCAGTTCAAACTTACAGA+TGG | + | chr4_1:61560916-61560935 | None:intergenic | 35.0% | |
| ATCTGTAAGTTTGAACTGCT+TGG | - | chr4_1:61560915-61560934 | Msa0561910:intron | 35.0% | |
| TACTAACTTGATTGTGGTTC+AGG | - | chr4_1:61560940-61560959 | Msa0561910:intron | 35.0% | |
| ! | TGATATCGCTATCTGTTTTG+AGG | + | chr4_1:61560995-61561014 | None:intergenic | 35.0% |
| ! | ATAGCTTAGAATACGGACTA+CGG | + | chr4_1:61561083-61561102 | None:intergenic | 35.0% |
| CAAACGCATAGCTTAGAATA+CGG | + | chr4_1:61561090-61561109 | None:intergenic | 35.0% | |
| TTCAGTGAGACATTTCCATA+CGG | - | chr4_1:61561234-61561253 | Msa0561910:intron | 35.0% | |
| CAATGACATTATCTACCGAT+TGG | + | chr4_1:61561272-61561291 | None:intergenic | 35.0% | |
| ! | AGAGAAGATCTAAAACCTGA+AGG | + | chr4_1:61561315-61561334 | None:intergenic | 35.0% |
| TAGCCTCAATCAAATTACAG+TGG | + | chr4_1:61561378-61561397 | None:intergenic | 35.0% | |
| AGCAGGTAGTGAAAATTGTT+TGG | - | chr4_1:61561406-61561425 | Msa0561910:CDS | 35.0% | |
| ! | ATTTTCACGTAAAATGCGAC+TGG | + | chr4_1:61561539-61561558 | None:intergenic | 35.0% |
| CAAAAAATCTATCCACCTTG+CGG | + | chr4_1:61561627-61561646 | None:intergenic | 35.0% | |
| !! | TTGGCTAGTTCTATAGTGTA+GGG | - | chr4_1:61561754-61561773 | Msa0561910:CDS | 35.0% |
| TCTGTTATAAGAATGCTGAG+TGG | - | chr4_1:61561875-61561894 | Msa0561910:intron | 35.0% | |
| TAATGGCTTAATTACACCAC+AGG | - | chr4_1:61561938-61561957 | Msa0561910:intron | 35.0% | |
| ! | TTTTACGGTGAGTTAACAGA+AGG | + | chr4_1:61562547-61562566 | None:intergenic | 35.0% |
| !!! | TCACGTCAGCGTTTTTTTTA+CGG | + | chr4_1:61562131-61562150 | None:intergenic | 35.0% |
| AACTGTTGTCTTCTTTCCTT+CGG | + | chr4_1:61562222-61562241 | None:intergenic | 35.0% | |
| ACCACACGAAATCTAATTGT+TGG | - | chr4_1:61562244-61562263 | Msa0561910:intron | 35.0% | |
| TCCAACAATTAGATTTCGTG+TGG | + | chr4_1:61562248-61562267 | None:intergenic | 35.0% | |
| ! | TGCAATGTACTTGGTAATCT+TGG | + | chr4_1:61562287-61562306 | None:intergenic | 35.0% |
| GATTACCAAGTACATTGCAA+AGG | - | chr4_1:61562288-61562307 | Msa0561910:intron | 35.0% | |
| TATTGCCTTTGCAATGTACT+TGG | + | chr4_1:61562296-61562315 | None:intergenic | 35.0% | |
| TAATACCAGCATTATTGCAG+GGG | + | chr4_1:61562395-61562414 | None:intergenic | 35.0% | |
| GTAATACCAGCATTATTGCA+GGG | + | chr4_1:61562396-61562415 | None:intergenic | 35.0% | |
| TGTAATACCAGCATTATTGC+AGG | + | chr4_1:61562397-61562416 | None:intergenic | 35.0% | |
| GCTTGAATTCGTCAAATCAA+TGG | + | chr4_1:61562428-61562447 | None:intergenic | 35.0% | |
| GATTTGACGAATTCAAGCTT+TGG | - | chr4_1:61562430-61562449 | Msa0561910:intron | 35.0% | |
| TTGAGAATTGGGGAAATGTA+AGG | - | chr4_1:61562477-61562496 | Msa0561910:intron | 35.0% | |
| TGAGAATTGGGGAAATGTAA+GGG | - | chr4_1:61562478-61562497 | Msa0561910:intron | 35.0% | |
| !!! | CACGTCAGCGTTTTTTTTTA+CGG | - | chr4_1:61562532-61562551 | Msa0561910:intron | 35.0% |
| GCACACTGTTACAAAGTTAA+AGG | - | chr4_1:61562578-61562597 | Msa0561910:intron | 35.0% | |
| GTTTGACGTTTGTAACATAC+AGG | + | chr4_1:61562634-61562653 | None:intergenic | 35.0% | |
| TTTAGGCTTAATTACACCAC+AGG | + | chr4_1:61562725-61562744 | None:intergenic | 35.0% | |
| AGCCATACACTTAGATCTAA+AGG | - | chr4_1:61562853-61562872 | Msa0561910:intron | 35.0% | |
| GCCATACACTTAGATCTAAA+GGG | - | chr4_1:61562854-61562873 | Msa0561910:intron | 35.0% | |
| GTATCTTATGTGAGAATGGT+AGG | + | chr4_1:61562892-61562911 | None:intergenic | 35.0% | |
| ATGGGTATCTTATGTGAGAA+TGG | + | chr4_1:61562896-61562915 | None:intergenic | 35.0% | |
| !!! | GTCGTCGGGATTTTTAATTT+GGG | + | chr4_1:61563449-61563468 | None:intergenic | 35.0% |
| !! | TGTCGTCGGGATTTTTAATT+TGG | + | chr4_1:61563450-61563469 | None:intergenic | 35.0% |
| TACTTTCATAGGGAACATCT+AGG | + | chr4_1:61563571-61563590 | None:intergenic | 35.0% | |
| TGTAGGTTGTAGTCAGTATT+AGG | + | chr4_1:61563663-61563682 | None:intergenic | 35.0% | |
| ACAACCTACATCCTATTATG+TGG | - | chr4_1:61563673-61563692 | Msa0561910:intron | 35.0% | |
| CAACCTACATCCTATTATGT+GGG | - | chr4_1:61563674-61563693 | Msa0561910:intron | 35.0% | |
| !! | TATCAACCTTGCTATTGAAC+AGG | - | chr4_1:61563870-61563889 | Msa0561910:intron | 35.0% |
| TAGTTTCCTGTTCAATAGCA+AGG | + | chr4_1:61563879-61563898 | None:intergenic | 35.0% | |
| CAAACTGTTTCAGAGAAAGA+AGG | + | chr4_1:61563990-61564009 | None:intergenic | 35.0% | |
| ATAGATTTGGAGGGAAAAGG+GGG | - | chr4_1:61557084-61557103 | Msa0561910:CDS | 40.0% | |
| AGTCATTGCTCACGTTGATA+TGG | - | chr4_1:61557161-61557180 | Msa0561910:CDS | 40.0% | |
| ! | ATGGATTGCTTCTACGTTCA+AGG | - | chr4_1:61557180-61557199 | Msa0561910:CDS | 40.0% |
| TTCTACGTTCAAGGTTCCTA+GGG | - | chr4_1:61557189-61557208 | Msa0561910:CDS | 40.0% | |
| GGAAAAGATTGTGAAACCCT+AGG | + | chr4_1:61557208-61557227 | Msa0561900:CDS | 40.0% | |
| TTGTACTGAACAACTGCAGT+AGG | + | chr4_1:61557327-61557346 | Msa0561900:intron | 40.0% | |
| GTTCAGTACAACTCCTACAA+AGG | - | chr4_1:61557336-61557355 | Msa0561910:intron | 40.0% | |
| CTGCATTCCTGTATGTATTG+AGG | + | chr4_1:61557584-61557603 | None:intergenic | 40.0% | |
| CTCAATACATACAGGAATGC+AGG | - | chr4_1:61557582-61557601 | Msa0561910:intron | 40.0% | |
| TGAGAGAGCTTCAATTGATG+AGG | - | chr4_1:61557741-61557760 | Msa0561910:intron | 40.0% | |
| ! | AAGCCTTATCCCAGTAAGTA+AGG | - | chr4_1:61558195-61558214 | Msa0561910:intron | 40.0% |
| CAACCTTACTTACTGGGATA+AGG | + | chr4_1:61558201-61558220 | None:intergenic | 40.0% | |
| CTTATCCCAGTAAGTAAGGT+TGG | - | chr4_1:61558199-61558218 | Msa0561910:intron | 40.0% | |
| TGTAGCCAACCTTACTTACT+GGG | + | chr4_1:61558207-61558226 | None:intergenic | 40.0% | |
| ATGTAGCCAACCTTACTTAC+TGG | + | chr4_1:61558208-61558227 | None:intergenic | 40.0% | |
| ! | AGTAAGTAAGGTTGGCTACA+TGG | - | chr4_1:61558207-61558226 | Msa0561910:intron | 40.0% |
| AGTATGGAGAGTAGATCATG+CGG | + | chr4_1:61558409-61558428 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACGATAT+AGG | + | chr4_1:61558544-61558563 | None:intergenic | 40.0% | |
| ACCAGCAATGTTGTATGCAA+CGG | + | chr4_1:61558639-61558658 | None:intergenic | 40.0% | |
| ! | AGTCCACCTTTGAGTCTTTT+TGG | - | chr4_1:61558772-61558791 | Msa0561910:intron | 40.0% |
| AGTGAGCCAAAAAGACTCAA+AGG | + | chr4_1:61558781-61558800 | None:intergenic | 40.0% | |
| !!! | TTGAGTCTTTTTGGCTCACT+AGG | - | chr4_1:61558781-61558800 | Msa0561910:intron | 40.0% |
| ! | CAGAAGTATAGCTTGAGACA+TGG | + | chr4_1:61558863-61558882 | None:intergenic | 40.0% |
| ! | CATACCCCCATGAATTTGTT+TGG | + | chr4_1:61558939-61558958 | None:intergenic | 40.0% |
| ! | CACAAGCTAGTAGCTTTTCT+TGG | + | chr4_1:61559096-61559115 | None:intergenic | 40.0% |
| ! | CAAGAAAAGCTACTAGCTTG+TGG | - | chr4_1:61559094-61559113 | Msa0561910:intron | 40.0% |
| ! | AGAAAAGCTACTAGCTTGTG+GGG | - | chr4_1:61559096-61559115 | Msa0561910:intron | 40.0% |
| CTTATTATGAGCAATACCGG+CGG | + | chr4_1:61559179-61559198 | None:intergenic | 40.0% | |
| AACATCAAGGACGAATCCTA+AGG | + | chr4_1:61559258-61559277 | None:intergenic | 40.0% | |
| TGCCACATTCATCTGTTGAA+GGG | - | chr4_1:61559376-61559395 | Msa0561910:intron | 40.0% | |
| AACCCTTCAACAGATGAATG+TGG | + | chr4_1:61559381-61559400 | None:intergenic | 40.0% | |
| GATGCCAAGATCACTTTGTA+AGG | + | chr4_1:61559699-61559718 | None:intergenic | 40.0% | |
| AAACTGAAGCAGATCACCAA+CGG | + | chr4_1:61559726-61559745 | None:intergenic | 40.0% | |
| ! | TGATCTGCTTCAGTTTTCAG+AGG | - | chr4_1:61559730-61559749 | Msa0561910:intron | 40.0% |
| GAGAAGCTACAACAACGTTA+TGG | - | chr4_1:61559752-61559771 | Msa0561910:intron | 40.0% | |
| CAACGTTATGGGATCAATAC+TGG | - | chr4_1:61559764-61559783 | Msa0561910:intron | 40.0% | |
| TGTGCGTTCATGGTTTCTTA+TGG | - | chr4_1:61559962-61559981 | Msa0561910:intron | 40.0% | |
| AATATTGCGAGAGGAATCAG+CGG | - | chr4_1:61560069-61560088 | Msa0561910:intron | 40.0% | |
| !! | GGTTCTGGAAAAACATTTCC+TGG | - | chr4_1:61560129-61560148 | Msa0561910:intron | 40.0% |
| CCCAATCCTTAGTTTCTCAA+AGG | - | chr4_1:61560269-61560288 | Msa0561910:CDS | 40.0% | |
| ! | CCAAGACCTTTGAGAAACTA+AGG | + | chr4_1:61560278-61560297 | None:intergenic | 40.0% |
| CCTTAGTTTCTCAAAGGTCT+TGG | - | chr4_1:61560275-61560294 | Msa0561910:CDS | 40.0% | |
| TAAGCCAATGTTGAACCTGA+AGG | + | chr4_1:61560447-61560466 | None:intergenic | 40.0% | |
| TTTGATCCATGTCAGAGTCA+AGG | + | chr4_1:61560498-61560517 | None:intergenic | 40.0% | |
| TCTGCATGCTAGAGCATATA+AGG | - | chr4_1:61560543-61560562 | Msa0561910:intron | 40.0% | |
| ! | TCTTTTGTCCTCTTCATCAG+AGG | - | chr4_1:61560643-61560662 | Msa0561910:CDS | 40.0% |
| GCATAAAACCTCTGATGAAG+AGG | + | chr4_1:61560654-61560673 | None:intergenic | 40.0% | |
| GCCCTAACTCTATTTCAATC+TGG | - | chr4_1:61560787-61560806 | Msa0561910:intron | 40.0% | |
| ! | TAGCTTAGAATACGGACTAC+GGG | + | chr4_1:61561082-61561101 | None:intergenic | 40.0% |
| TGGTTTGATGAAGAACCGTA+TGG | + | chr4_1:61561252-61561271 | None:intergenic | 40.0% | |
| CGGTTCTTCATCAAACCAAT+CGG | - | chr4_1:61561254-61561273 | Msa0561910:intron | 40.0% | |
| ! | TGTTGATCTAGACACGCTTT+TGG | + | chr4_1:61561491-61561510 | None:intergenic | 40.0% |
| ! | AAAAGCGTGTCTAGATCAAC+AGG | - | chr4_1:61561490-61561509 | Msa0561910:intron | 40.0% |
| GCAAATATTAGATGACCGCA+AGG | - | chr4_1:61561609-61561628 | Msa0561910:intron | 40.0% | |
| AATATTAGATGACCGCAAGG+TGG | - | chr4_1:61561612-61561631 | Msa0561910:intron | 40.0% | |
| TTAAGCCAACTTTCTCATCC+CGG | + | chr4_1:61561720-61561739 | None:intergenic | 40.0% | |
| !! | CTTGGCTAGTTCTATAGTGT+AGG | - | chr4_1:61561753-61561772 | Msa0561910:CDS | 40.0% |
| GCACACTGTTACAGAGTTAA+AGG | + | chr4_1:61562085-61562104 | None:intergenic | 40.0% | |
| AATCAGGAGAAGATAACCGA+AGG | - | chr4_1:61562203-61562222 | Msa0561910:intron | 40.0% | |
| TTGGGGAAATGTAAGGGTAA+AGG | - | chr4_1:61562484-61562503 | Msa0561910:intron | 40.0% | |
| CGTAAAAAAAAACGCTGACG+TGG | + | chr4_1:61562534-61562553 | None:intergenic | 40.0% | |
| GCCCTTTAGATCTAAGTGTA+TGG | + | chr4_1:61562858-61562877 | None:intergenic | 40.0% | |
| ! | TATGTATGATGGAACGAAGG+AGG | - | chr4_1:61563036-61563055 | Msa0561910:intron | 40.0% |
| !!! | CTCTGTTATTTTGTCTCTGC+TGG | + | chr4_1:61563309-61563328 | None:intergenic | 40.0% |
| TTCCGATGCAAAATTGTCGT+CGG | + | chr4_1:61563464-61563483 | None:intergenic | 40.0% | |
| TGTCCCACATAATAGGATGT+AGG | + | chr4_1:61563680-61563699 | None:intergenic | 40.0% | |
| AAACAGGGTGATTGATGTTC+TGG | + | chr4_1:61563722-61563741 | None:intergenic | 40.0% | |
| TGCAAGTGCTATAGCAAACA+GGG | + | chr4_1:61563737-61563756 | None:intergenic | 40.0% | |
| ATGCAAGTGCTATAGCAAAC+AGG | + | chr4_1:61563738-61563757 | None:intergenic | 40.0% | |
| TCACTTATGCAGGTAACTGA+AGG | + | chr4_1:61563772-61563791 | None:intergenic | 40.0% | |
| ! | ATGAGGTGTTTCACTTATGC+AGG | + | chr4_1:61563782-61563801 | None:intergenic | 40.0% |
| TTGGAACTTAACCATGTTGC+AGG | + | chr4_1:61563923-61563942 | None:intergenic | 40.0% | |
| !! | GTTTGTTTCCAAGGTTTTGG+AGG | + | chr4_1:61563954-61563973 | None:intergenic | 40.0% |
| ! | GCTGTTTGTTTCCAAGGTTT+TGG | + | chr4_1:61563957-61563976 | None:intergenic | 40.0% |
| !! | TTGCTTGCTGTTTGTTTCCA+AGG | + | chr4_1:61563963-61563982 | None:intergenic | 40.0% |
| !! | AAGACAGTGAGGTTGATGTT+CGG | + | chr4_1:61564036-61564055 | None:intergenic | 40.0% |
| TAGATTTGGAGGGAAAAGGG+GGG | - | chr4_1:61557085-61557104 | Msa0561910:CDS | 45.0% | |
| CTTCTACGTTCAAGGTTCCT+AGG | - | chr4_1:61557188-61557207 | Msa0561910:CDS | 45.0% | |
| CAGTACAACTCCTACAAAGG+CGG | - | chr4_1:61557339-61557358 | Msa0561910:intron | 45.0% | |
| AGCTATGAAGCTCGCAAATC+TGG | - | chr4_1:61557378-61557397 | Msa0561910:intron | 45.0% | |
| ! | CTCGCAAATCTGGTGTCAAA+CGG | - | chr4_1:61557388-61557407 | Msa0561910:intron | 45.0% |
| AACCAATTGAATTTGCGGGC+AGG | + | chr4_1:61557532-61557551 | None:intergenic | 45.0% | |
| ATACAGGAATGCAGGTTCAG+AGG | - | chr4_1:61557590-61557609 | Msa0561910:intron | 45.0% | |
| TGTTTCCATTCTTTCGCGCA+AGG | - | chr4_1:61557711-61557730 | Msa0561910:intron | 45.0% | |
| GTTTCCATTCTTTCGCGCAA+GGG | - | chr4_1:61557712-61557731 | Msa0561910:intron | 45.0% | |
| TCAACATGTTCCACGCTTTC+AGG | + | chr4_1:61557817-61557836 | None:intergenic | 45.0% | |
| ! | TGAAAGCGTGGAACATGTTG+AGG | - | chr4_1:61557816-61557835 | Msa0561910:intron | 45.0% |
| GGGCTTCAAATTAAGGTCAG+AGG | - | chr4_1:61557865-61557884 | Msa0561910:intron | 45.0% | |
| GGTTGAACTTGTGAACCATG+AGG | + | chr4_1:61558043-61558062 | None:intergenic | 45.0% | |
| AGAGGCAGATGAAGATCATG+CGG | + | chr4_1:61558366-61558385 | None:intergenic | 45.0% | |
| !! | GCTTAGTTGGTTTGAGCATG+TGG | + | chr4_1:61558454-61558473 | None:intergenic | 45.0% |
| ! | GTTGTATGCAACGGAGTGTT+GGG | + | chr4_1:61558630-61558649 | None:intergenic | 45.0% |
| TGTTGTATGCAACGGAGTGT+TGG | + | chr4_1:61558631-61558650 | None:intergenic | 45.0% | |
| TCCGTTGCATACAACATTGC+TGG | - | chr4_1:61558635-61558654 | Msa0561910:intron | 45.0% | |
| GAGCCAAAAAGACTCAAAGG+TGG | + | chr4_1:61558778-61558797 | None:intergenic | 45.0% | |
| !!! | AGTCTTTTTGGCTCACTAGG+TGG | - | chr4_1:61558784-61558803 | Msa0561910:intron | 45.0% |
| !!! | GTCTTTTTGGCTCACTAGGT+GGG | - | chr4_1:61558785-61558804 | Msa0561910:intron | 45.0% |
| !!! | TCTTTTTGGCTCACTAGGTG+GGG | - | chr4_1:61558786-61558805 | Msa0561910:intron | 45.0% |
| CGCCGGTATTGCTCATAATA+AGG | - | chr4_1:61559177-61559196 | Msa0561910:intron | 45.0% | |
| AATAAGGCAAGCAGCATCCT+TGG | - | chr4_1:61559193-61559212 | Msa0561910:intron | 45.0% | |
| TCAAGGACGAATCCTAAGGA+AGG | + | chr4_1:61559254-61559273 | None:intergenic | 45.0% | |
| AAGCACCAGGCATACGTTAA+TGG | + | chr4_1:61559297-61559316 | None:intergenic | 45.0% | |
| !! | CAGCATCTGAAAAAAGCACC+AGG | + | chr4_1:61559310-61559329 | None:intergenic | 45.0% |
| !!! | CTGGTGCTTTTTTCAGATGC+TGG | - | chr4_1:61559308-61559327 | Msa0561910:intron | 45.0% |
| GTGCCACATTCATCTGTTGA+AGG | - | chr4_1:61559375-61559394 | Msa0561910:intron | 45.0% | |
| ! | TTGGCTTTCAGGAAACAGCT+TGG | - | chr4_1:61559656-61559675 | Msa0561910:CDS | 45.0% |
| AAACAGCTTGGAGGAAAGCT+GGG | - | chr4_1:61559668-61559687 | Msa0561910:CDS | 45.0% | |
| TATGCATGCATGTGCGTTCA+TGG | - | chr4_1:61559952-61559971 | Msa0561910:intron | 45.0% | |
| TTGTCTGCATAGCGATCTGT+AGG | - | chr4_1:61559997-61560016 | Msa0561910:intron | 45.0% | |
| AATCAGCGGAGAAGAAGTTG+AGG | - | chr4_1:61560083-61560102 | Msa0561910:intron | 45.0% | |
| ATCAGCGGAGAAGAAGTTGA+GGG | - | chr4_1:61560084-61560103 | Msa0561910:intron | 45.0% | |
| TTTCCAGAACCATGGCTCTT+GGG | + | chr4_1:61560120-61560139 | None:intergenic | 45.0% | |
| ! | TTTTCCAGAACCATGGCTCT+TGG | + | chr4_1:61560121-61560140 | None:intergenic | 45.0% |
| GCGATTGTCTTCAAAGCTTG+AGG | + | chr4_1:61560156-61560175 | None:intergenic | 45.0% | |
| GCATGCTAGAGCATATAAGG+TGG | - | chr4_1:61560546-61560565 | Msa0561910:intron | 45.0% | |
| TGGGACTACAAAGATCCAAG+AGG | - | chr4_1:61560762-61560781 | Msa0561910:intron | 45.0% | |
| ! | ATAGAGTTAGGGCATCCTCT+TGG | + | chr4_1:61560780-61560799 | None:intergenic | 45.0% |
| CTAAAACCTGAAGGTGACGA+GGG | + | chr4_1:61561306-61561325 | None:intergenic | 45.0% | |
| ! | TCTAAAACCTGAAGGTGACG+AGG | + | chr4_1:61561307-61561326 | None:intergenic | 45.0% |
| TTGAGGCTATATGCTGAAGC+AGG | - | chr4_1:61561389-61561408 | Msa0561910:CDS | 45.0% | |
| GAATGTCCTGAAGAAGACAC+AGG | - | chr4_1:61561455-61561474 | Msa0561910:intron | 45.0% | |
| TTCACTCCTGTGTCTTCTTC+AGG | + | chr4_1:61561464-61561483 | None:intergenic | 45.0% | |
| ! | GATCTAGACACGCTTTTGGA+TGG | + | chr4_1:61561487-61561506 | None:intergenic | 45.0% |
| TACTGGGATCTAGTCCTGAT+AGG | - | chr4_1:61561692-61561711 | Msa0561910:intron | 45.0% | |
| TAAGCCAACTTTCTCATCCC+GGG | + | chr4_1:61561719-61561738 | None:intergenic | 45.0% | |
| AGAAATGCAGAAGGGCAGAA+TGG | - | chr4_1:61561790-61561809 | Msa0561910:intron | 45.0% | |
| GAAATGCAGAAGGGCAGAAT+GGG | - | chr4_1:61561791-61561810 | Msa0561910:intron | 45.0% | |
| GCAGAATGGGAATATCCACA+CGG | - | chr4_1:61561804-61561823 | Msa0561910:intron | 45.0% | |
| AATGCTGAGTGGAGAGAGAA+GGG | - | chr4_1:61561886-61561905 | Msa0561910:intron | 45.0% | |
| CGTCAAACTTAAAGGACCTG+TGG | + | chr4_1:61562706-61562725 | None:intergenic | 45.0% | |
| TTCTTCCCCTGCAATAATGC+TGG | - | chr4_1:61562387-61562406 | Msa0561910:intron | 45.0% | |
| TGGAGTCAGGGTTTGAGAAT+TGG | - | chr4_1:61562465-61562484 | Msa0561910:intron | 45.0% | |
| GGAGTCAGGGTTTGAGAATT+GGG | - | chr4_1:61562466-61562485 | Msa0561910:intron | 45.0% | |
| GAGTCAGGGTTTGAGAATTG+GGG | - | chr4_1:61562467-61562486 | Msa0561910:intron | 45.0% | |
| CGTCAAACTTAAAGGACCTG+TGG | - | chr4_1:61562706-61562725 | Msa0561910:intron | 45.0% | |
| ! | TCCCGACGACAATTTTGCAT+CGG | - | chr4_1:61563459-61563478 | Msa0561910:intron | 45.0% |
| TCCGATGCAAAATTGTCGTC+GGG | + | chr4_1:61563463-61563482 | None:intergenic | 45.0% | |
| CAGCAGTTGTCCCACATAAT+AGG | + | chr4_1:61563687-61563706 | None:intergenic | 45.0% | |
| GAACTTAACCATGTTGCAGG+TGG | + | chr4_1:61563920-61563939 | None:intergenic | 45.0% | |
| !!! | GGTTTTGGAGGAACTTCAGT+TGG | + | chr4_1:61563942-61563961 | None:intergenic | 45.0% |
| CTGAAGTTCCTCCAAAACCT+TGG | - | chr4_1:61563943-61563962 | Msa0561910:CDS | 45.0% | |
| !! | TACATTAATTAAATTAAATT+GGG | + | chr4_1:61557252-61557271 | Msa0561900:intron | 5.0% |
| !! | TTACATTAATTAAATTAAAT+TGG | + | chr4_1:61557253-61557272 | Msa0561900:intron | 5.0% |
| GCGAGAAGAGAGAGTTGTGA+TGG | - | chr4_1:61557135-61557154 | Msa0561910:CDS | 50.0% | |
| GTAGGCAAGCCCCTTAAACT+TGG | + | chr4_1:61557309-61557328 | Msa0561900:intron | 50.0% | |
| TACAACTCCTACAAAGGCGG+TGG | - | chr4_1:61557342-61557361 | Msa0561910:intron | 50.0% | |
| AATCAAGCCACCGCCTTTGT+AGG | + | chr4_1:61557352-61557371 | Msa0561900:CDS | 50.0% | |
| AATGCGTGGCGATGAAGCAA+AGG | - | chr4_1:61557503-61557522 | Msa0561910:intron | 50.0% | |
| AGCCTGCCCGCAAATTCAAT+TGG | - | chr4_1:61557527-61557546 | Msa0561910:intron | 50.0% | |
| ! | TAGCTTTACCGCGTGCTACA+GGG | + | chr4_1:61557560-61557579 | None:intergenic | 50.0% |
| !! | TTAGCTTTACCGCGTGCTAC+AGG | + | chr4_1:61557561-61557580 | None:intergenic | 50.0% |
| !! | TTGTTTGAGCAGCATCGGTG+AGG | + | chr4_1:61557777-61557796 | None:intergenic | 50.0% |
| ACATGTTCCACGCTTTCAGG+AGG | + | chr4_1:61557814-61557833 | None:intergenic | 50.0% | |
| GAGGGTAGTCAAATGGCTAG+AGG | + | chr4_1:61558341-61558360 | None:intergenic | 50.0% | |
| GATGAAGATCATGCGGAGGA+GGG | + | chr4_1:61558359-61558378 | None:intergenic | 50.0% | |
| AGATGAAGATCATGCGGAGG+AGG | + | chr4_1:61558360-61558379 | None:intergenic | 50.0% | |
| GAGGGTAGTCAAATGGCTAG+AGG | + | chr4_1:61558341-61558360 | None:intergenic | 50.0% | |
| AGAGTAGATCATGCGGAGGA+GGG | + | chr4_1:61558402-61558421 | None:intergenic | 50.0% | |
| ATGGAGAGTAGATCATGCGG+AGG | + | chr4_1:61558406-61558425 | None:intergenic | 50.0% | |
| TGGTGGAAACTCGGCTTAGT+TGG | + | chr4_1:61558467-61558486 | None:intergenic | 50.0% | |
| CGTCAGTTTACCAGCCAAAC+TGG | - | chr4_1:61558832-61558851 | Msa0561910:intron | 50.0% | |
| CCTGAGTTCGGCAACAATGA+AGG | + | chr4_1:61559122-61559141 | None:intergenic | 50.0% | |
| CCTTCATTGTTGCCGAACTC+AGG | - | chr4_1:61559119-61559138 | Msa0561910:intron | 50.0% | |
| AGTGGCCATTAACGTATGCC+TGG | - | chr4_1:61559289-61559308 | Msa0561910:intron | 50.0% | |
| !! | GGCACAACTGTTTGTTGTGC+AGG | + | chr4_1:61559360-61559379 | None:intergenic | 50.0% |
| GCTTTCAGGAAACAGCTTGG+AGG | - | chr4_1:61559659-61559678 | Msa0561910:CDS | 50.0% | |
| GAAACAGCTTGGAGGAAAGC+TGG | - | chr4_1:61559667-61559686 | Msa0561910:CDS | 50.0% | |
| AACAGCTTGGAGGAAAGCTG+GGG | - | chr4_1:61559669-61559688 | Msa0561910:CDS | 50.0% | |
| GATCTTGGCATCAACACCGT+TGG | - | chr4_1:61559707-61559726 | Msa0561910:intron | 50.0% | |
| AGCATTGCAGTACTTGGCTG+TGG | - | chr4_1:61560046-61560065 | Msa0561910:intron | 50.0% | |
| TGGCTGTGGAATATTGCGAG+AGG | - | chr4_1:61560060-61560079 | Msa0561910:intron | 50.0% | |
| TCAGCGGAGAAGAAGTTGAG+GGG | - | chr4_1:61560085-61560104 | Msa0561910:intron | 50.0% | |
| !! | GATGTTGCTGCTTTCAGCAG+CGG | - | chr4_1:61560228-61560247 | Msa0561910:CDS | 50.0% |
| TGAACGCCTTGACTCTGACA+TGG | - | chr4_1:61560489-61560508 | Msa0561910:intron | 50.0% | |
| ! | TGTGGTTCAGGTTCATCCTC+TGG | - | chr4_1:61560952-61560971 | Msa0561910:CDS | 50.0% |
| !! | CATCCTCTGGCTCTTGACAT+AGG | - | chr4_1:61560965-61560984 | Msa0561910:CDS | 50.0% |
| GATCCTATGTCAAGAGCCAG+AGG | + | chr4_1:61560971-61560990 | None:intergenic | 50.0% | |
| GATCTAGTCCTGATAGGACC+CGG | - | chr4_1:61561698-61561717 | Msa0561910:CDS | 50.0% | |
| ATCTAGTCCTGATAGGACCC+GGG | - | chr4_1:61561699-61561718 | Msa0561910:CDS | 50.0% | |
| TGAGAGTGAGAGGTGGGAAA+CGG | - | chr4_1:61561828-61561847 | Msa0561910:intron | 50.0% | |
| GAATGCTGAGTGGAGAGAGA+AGG | - | chr4_1:61561885-61561904 | Msa0561910:intron | 50.0% | |
| TTATTGCAGGGGAAGAACGC+AGG | + | chr4_1:61562384-61562403 | None:intergenic | 50.0% | |
| CATGTTGCAGGTGGACATGT+TGG | + | chr4_1:61563911-61563930 | None:intergenic | 50.0% | |
| CAACATGTCCACCTGCAACA+TGG | - | chr4_1:61563909-61563928 | Msa0561910:intron | 50.0% | |
| GAGAGAGAGAGAGAGGGATG+CGG | - | chr4_1:61557109-61557128 | Msa0561910:CDS | 55.0% | |
| AGAGAGAGAGAGAGGGATGC+GGG | - | chr4_1:61557110-61557129 | Msa0561910:CDS | 55.0% | |
| GTTCAAGTCCCTGTAGCACG+CGG | - | chr4_1:61557549-61557568 | Msa0561910:intron | 55.0% | |
| TCGACCCTTGCGCGAAAGAA+TGG | + | chr4_1:61557719-61557738 | None:intergenic | 55.0% | |
| GGAAACTCCTCCTGAAAGCG+TGG | - | chr4_1:61557804-61557823 | Msa0561910:intron | 55.0% | |
| TGCGGAGGAGGGTAGTCAAA+TGG | + | chr4_1:61558348-61558367 | None:intergenic | 55.0% | |
| GGCAGATGAAGATCATGCGG+AGG | + | chr4_1:61558363-61558382 | None:intergenic | 55.0% | |
| TGCGGAGGAGGGTAGTCAAA+TGG | + | chr4_1:61558348-61558367 | None:intergenic | 55.0% | |
| GAGAGTAGATCATGCGGAGG+AGG | + | chr4_1:61558403-61558422 | None:intergenic | 55.0% | |
| ! | GAGACATGGGCTGACCAGTT+TGG | + | chr4_1:61558849-61558868 | None:intergenic | 55.0% |
| ! | GGGGTATGACGAGAGCATGT+AGG | - | chr4_1:61558951-61558970 | Msa0561910:intron | 55.0% |
| ACAGAATTCACGTGCTCCGC+CGG | - | chr4_1:61559160-61559179 | Msa0561910:intron | 55.0% | |
| CGACTACTTCCCAAGAGCCA+TGG | - | chr4_1:61560108-61560127 | Msa0561910:intron | 55.0% | |
| CTTCCCAAGAGCCATGGTTC+TGG | - | chr4_1:61560114-61560133 | Msa0561910:intron | 55.0% | |
| GTCTTCAAAGCTTGAGGCCC+AGG | + | chr4_1:61560150-61560169 | None:intergenic | 55.0% | |
| TTCTCATCCCGGGTCCTATC+AGG | + | chr4_1:61561709-61561728 | None:intergenic | 55.0% | |
| AGGACCCGGGATGAGAAAGT+TGG | - | chr4_1:61561712-61561731 | Msa0561910:CDS | 55.0% | |
| GAGAGTGAGAGGTGGGAAAC+GGG | - | chr4_1:61561829-61561848 | Msa0561910:intron | 55.0% | |
| GGGGGAGAGAGAGAGAGAGA+GGG | - | chr4_1:61557103-61557122 | Msa0561910:CDS | 60.0% | |
| ! | CATGGGCTGACCAGTTTGGC+TGG | + | chr4_1:61558845-61558864 | None:intergenic | 60.0% |
| GTTGCACCCTCGTCACCTTC+AGG | - | chr4_1:61561297-61561316 | Msa0561910:intron | 60.0% | |
| TCCACACGGCTGAGAGTGAG+AGG | - | chr4_1:61561818-61561837 | Msa0561910:intron | 60.0% | |
| ACCTCTCACTCTCAGCCGTG+TGG | + | chr4_1:61561822-61561841 | None:intergenic | 60.0% | |
| ACACGGCTGAGAGTGAGAGG+TGG | - | chr4_1:61561821-61561840 | Msa0561910:intron | 60.0% | |
| CACGGCTGAGAGTGAGAGGT+GGG | - | chr4_1:61561822-61561841 | Msa0561910:intron | 60.0% | |
| GGGGGGAGAGAGAGAGAGAG+AGG | - | chr4_1:61557102-61557121 | Msa0561910:CDS | 65.0% | |
| GAGAGAGAGAGGGATGCGGG+TGG | - | chr4_1:61557113-61557132 | Msa0561910:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 61557067 | 61564056 | 61557067 | ID=Msa0561910;Name=Msa0561910 |
| chr4_1 | mRNA | 61557067 | 61564056 | 61557067 | ID=Msa0561910-mRNA-1;Parent=Msa0561910;Name=Msa0561910-mRNA-1;_AED=0.12;_eAED=0.12;_QI=59|0.83|0.69|1|0.91|0.92|13|0|548 |
| chr4_1 | exon | 61563922 | 61564056 | 61563922 | ID=Msa0561910-mRNA-1:exon:19357;Parent=Msa0561910-mRNA-1 |
| chr4_1 | exon | 61563714 | 61563834 | 61563714 | ID=Msa0561910-mRNA-1:exon:19356;Parent=Msa0561910-mRNA-1 |
| chr4_1 | exon | 61563512 | 61563623 | 61563512 | ID=Msa0561910-mRNA-1:exon:19355;Parent=Msa0561910-mRNA-1 |
| chr4_1 | exon | 61563244 | 61563414 | 61563244 | ID=Msa0561910-mRNA-1:exon:19354;Parent=Msa0561910-mRNA-1 |
| chr4_1 | exon | 61561976 | 61562089 | 61561976 | ID=Msa0561910-mRNA-1:exon:19353;Parent=Msa0561910-mRNA-1 |
| chr4_1 | exon | 61561696 | 61561799 | 61561696 | ID=Msa0561910-mRNA-1:exon:19352;Parent=Msa0561910-mRNA-1 |
| chr4_1 | exon | 61561337 | 61561456 | 61561337 | ID=Msa0561910-mRNA-1:exon:19351;Parent=Msa0561910-mRNA-1 |
| chr4_1 | exon | 61560944 | 61561067 | 61560944 | ID=Msa0561910-mRNA-1:exon:19350;Parent=Msa0561910-mRNA-1 |
| chr4_1 | exon | 61560559 | 61560672 | 61560559 | ID=Msa0561910-mRNA-1:exon:19349;Parent=Msa0561910-mRNA-1 |
| chr4_1 | exon | 61560205 | 61560417 | 61560205 | ID=Msa0561910-mRNA-1:exon:19348;Parent=Msa0561910-mRNA-1 |
| chr4_1 | exon | 61559805 | 61559913 | 61559805 | ID=Msa0561910-mRNA-1:exon:19347;Parent=Msa0561910-mRNA-1 |
| chr4_1 | exon | 61559612 | 61559712 | 61559612 | ID=Msa0561910-mRNA-1:exon:19346;Parent=Msa0561910-mRNA-1 |
| chr4_1 | exon | 61557067 | 61557231 | 61557067 | ID=Msa0561910-mRNA-1:exon:19345;Parent=Msa0561910-mRNA-1 |
| chr4_1 | five_prime_UTR | 61563998 | 61564056 | 61563998 | ID=Msa0561910-mRNA-1:five_prime_utr;Parent=Msa0561910-mRNA-1 |
| chr4_1 | CDS | 61563922 | 61563997 | 61563922 | ID=Msa0561910-mRNA-1:cds;Parent=Msa0561910-mRNA-1 |
| chr4_1 | CDS | 61563714 | 61563834 | 61563714 | ID=Msa0561910-mRNA-1:cds;Parent=Msa0561910-mRNA-1 |
| chr4_1 | CDS | 61563512 | 61563623 | 61563512 | ID=Msa0561910-mRNA-1:cds;Parent=Msa0561910-mRNA-1 |
| chr4_1 | CDS | 61563244 | 61563414 | 61563244 | ID=Msa0561910-mRNA-1:cds;Parent=Msa0561910-mRNA-1 |
| chr4_1 | CDS | 61561976 | 61562089 | 61561976 | ID=Msa0561910-mRNA-1:cds;Parent=Msa0561910-mRNA-1 |
| chr4_1 | CDS | 61561696 | 61561799 | 61561696 | ID=Msa0561910-mRNA-1:cds;Parent=Msa0561910-mRNA-1 |
| chr4_1 | CDS | 61561337 | 61561456 | 61561337 | ID=Msa0561910-mRNA-1:cds;Parent=Msa0561910-mRNA-1 |
| chr4_1 | CDS | 61560944 | 61561067 | 61560944 | ID=Msa0561910-mRNA-1:cds;Parent=Msa0561910-mRNA-1 |
| chr4_1 | CDS | 61560559 | 61560672 | 61560559 | ID=Msa0561910-mRNA-1:cds;Parent=Msa0561910-mRNA-1 |
| chr4_1 | CDS | 61560205 | 61560417 | 61560205 | ID=Msa0561910-mRNA-1:cds;Parent=Msa0561910-mRNA-1 |
| chr4_1 | CDS | 61559805 | 61559913 | 61559805 | ID=Msa0561910-mRNA-1:cds;Parent=Msa0561910-mRNA-1 |
| chr4_1 | CDS | 61559612 | 61559712 | 61559612 | ID=Msa0561910-mRNA-1:cds;Parent=Msa0561910-mRNA-1 |
| chr4_1 | CDS | 61557067 | 61557231 | 61557067 | ID=Msa0561910-mRNA-1:cds;Parent=Msa0561910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
