AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0567210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0567210 MtrunA17_Chr8g0381971 92.708 288 16 2 1 288 1 283 0.0 526
Msa0567210 MtrunA17_Chr5g0415341 35.737 319 155 10 5 305 6 292 2.33e-53 176
Msa0567210 MtrunA17_Chr4g0058901 29.286 280 157 12 13 267 12 275 9.38e-26 104
Msa0567210 MtrunA17_Chr4g0069121 28.514 249 153 8 31 268 30 264 3.41e-23 97.1
Msa0567210 MtrunA17_Chr4g0075211 28.358 268 146 11 33 274 36 283 1.41e-22 95.9
Msa0567210 MtrunA17_Chr2g0288891 28.364 275 149 13 27 274 16 269 3.18e-20 89.0
Msa0567210 MtrunA17_Chr3g0112391 27.843 255 142 14 39 282 31 254 8.43e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0567210 AT1G10380.1 40.964 249 126 6 34 267 28 270 7.46e-46 157
Msa0567210 AT1G10380.2 40.964 249 126 6 34 267 28 270 1.51e-45 156
Msa0567210 AT3G17350.2 29.670 273 161 10 16 270 12 271 5.46e-23 96.3
Msa0567210 AT1G11915.1 29.964 277 159 12 7 260 1 265 4.62e-22 94.7
Msa0567210 AT3G17350.1 29.545 264 156 9 16 262 12 262 1.10e-21 93.2
Msa0567210 AT5G50290.1 28.000 275 161 12 18 267 4 266 9.59e-21 90.5

Find 113 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCCTACTCATTGGGTTTA+TGG 0.115730 4_1:+68542210 Msa0567210:CDS
TGAAAGTGGATGAAGATATT+TGG 0.257191 4_1:-68541951 None:intergenic
TTGGCACAGGTCCTGGTTGC+GGG 0.266168 4_1:+68541728 Msa0567210:CDS
GTGTATGAAATGGAGGTTAT+AGG 0.283646 4_1:-68541835 None:intergenic
TGCGTCAAAGCTTCCACTTT+TGG 0.298303 4_1:+68543296 Msa0567210:three_prime_UTR
GGCAGTCAGTGCACAAAGTT+CGG 0.327170 4_1:+68543159 Msa0567210:three_prime_UTR
CTCACAACTAGTACATTTAG+TGG 0.331784 4_1:-68542277 None:intergenic
ATCAAAACCAAGATTTCCTT+TGG 0.338876 4_1:+68542397 Msa0567210:CDS
GTTCGGGCATACGCAGGGTC+TGG 0.362335 4_1:+68543176 Msa0567210:three_prime_UTR
TTTGATGTGCATGTTATGTA+TGG 0.363083 4_1:-68541766 None:intergenic
GTTAAATCAATGCCAAAGTT+TGG 0.363622 4_1:-68541919 None:intergenic
TACATAACATGCACATCAAA+TGG 0.388250 4_1:+68541769 Msa0567210:CDS
GCAGTCAGTGCACAAAGTTC+GGG 0.389796 4_1:+68543160 Msa0567210:three_prime_UTR
CGGGGAACCTAGACGGCAAA+GGG 0.391013 4_1:+68542118 Msa0567210:CDS
TTTGGCACAGGTCCTGGTTG+CGG 0.395015 4_1:+68541727 Msa0567210:CDS
ACACAAACAAATCCACTTCC+TGG 0.398611 4_1:-68542330 None:intergenic
TCAACTCCCCTTTGCCGTCT+AGG 0.402495 4_1:-68542125 None:intergenic
TAGAGTCCCAAAGGAAATCT+TGG 0.407259 4_1:-68542404 None:intergenic
TATCCCTTTGGCACAGGTCC+TGG 0.410285 4_1:+68541721 Msa0567210:CDS
TATGAACAGTTCGGAATGTC+TGG 0.415499 4_1:+68542875 Msa0567210:intron
GAATGTCTGGAGTTCCATCT+TGG 0.416640 4_1:+68542888 Msa0567210:CDS
GATCGTAATTAGAGCAATCA+AGG 0.418096 4_1:-68542377 None:intergenic
CCCTACTGATCCTACTCATT+GGG 0.420444 4_1:+68542203 Msa0567210:CDS
GTTATGTATGGGTTGAATAG+TGG 0.421768 4_1:-68541754 None:intergenic
TGTATGAAATGGAGGTTATA+GGG 0.425846 4_1:-68541834 None:intergenic
TGTTGTTGAGGCTGTGGGTG+TGG 0.432596 4_1:-68541656 None:intergenic
TATACACAACATGTGTTAGT+AGG 0.444066 4_1:-68542090 None:intergenic
ACCCTACTGATCCTACTCAT+TGG 0.456155 4_1:+68542202 Msa0567210:CDS
TTCGGGCATACGCAGGGTCT+GGG 0.458701 4_1:+68543177 Msa0567210:three_prime_UTR
TTTGTTTGTGTTTGTAAAGG+TGG 0.459550 4_1:+68542342 Msa0567210:CDS
TTTGTGTACAATACATCAAA+TGG 0.464239 4_1:-68543211 None:intergenic
AATGGAGGTTATAGGGTATG+AGG 0.466527 4_1:-68541827 None:intergenic
TCAAAACCAAGATTTCCTTT+GGG 0.473584 4_1:+68542398 Msa0567210:CDS
AGATAACAATACACCAAAAG+TGG 0.476574 4_1:-68543309 None:intergenic
TGTTAGTGTTGTTGAGGCTG+TGG 0.477766 4_1:-68541662 None:intergenic
GTCTGGAGTTCCATCTTGGC+TGG 0.482605 4_1:+68542892 Msa0567210:CDS
ATGCAAACGTCACCAAACTT+TGG 0.492190 4_1:+68541907 Msa0567210:CDS
ATACAAGTCAAGTATCCCTT+TGG 0.494214 4_1:+68541709 Msa0567210:CDS
CCGGGGAACCTAGACGGCAA+AGG 0.496288 4_1:+68542117 Msa0567210:CDS
CACATGTTGTGTATACTCAC+CGG 0.497181 4_1:+68542098 Msa0567210:CDS
ATCAAAAGAAGTGTCACAAA+TGG 0.498238 4_1:-68542004 None:intergenic
CCTTTGCCGTCTAGGTTCCC+CGG 0.498477 4_1:-68542117 None:intergenic
TATTCAACATCAATATGTAA+TGG 0.500190 4_1:-68543366 None:intergenic
GTGGAAAGAGGTGGTAGTAG+TGG 0.501478 4_1:-68541598 None:intergenic
TGTGAGTGTGAGAGTGGAAG+TGG 0.506008 4_1:-68541857 None:intergenic
TACACTAGACTAGACTTCAT+AGG 0.508690 4_1:-68543087 None:intergenic
CTAAGATGAGAATCATGAAA+AGG 0.513752 4_1:-68541630 None:intergenic
GGGTGGTGTGAGTGTGAGAG+TGG 0.515614 4_1:-68541863 None:intergenic
TAATCGGATGATAATGCTGC+TGG 0.516924 4_1:+68542934 Msa0567210:exon
GTTAGTGTTGTTGAGGCTGT+GGG 0.518223 4_1:-68541661 None:intergenic
TATACTTCGGTTGTGTCACT+TGG 0.519729 4_1:+68542174 Msa0567210:CDS
AGTGGAAGTGGTGTATGAAA+TGG 0.521135 4_1:-68541845 None:intergenic
GAAAATGATACCAGCCAAGA+TGG 0.521207 4_1:-68542902 None:intergenic
CACAAAGTTCGGGCATACGC+AGG 0.521934 4_1:+68543170 Msa0567210:three_prime_UTR
GGATATGATCCTCCAGGAAG+TGG 0.524771 4_1:+68542318 Msa0567210:CDS
AATAGTGGGGACCCGCAACC+AGG 0.526866 4_1:-68541739 None:intergenic
AGTAGTGGTGGTAGTGCCAT+TGG 0.534426 4_1:-68541583 None:intergenic
GGATTTGTTTGTGTTTGTAA+AGG 0.540887 4_1:+68542339 Msa0567210:CDS
GCAACCAGGACCTGTGCCAA+AGG 0.541377 4_1:-68541725 None:intergenic
AAGTGGAAGCTTTGACGCAA+AGG 0.544197 4_1:-68543292 None:intergenic
GCAAGAGAGGAGGATGAAAG+TGG 0.545372 4_1:-68541965 None:intergenic
GTCAAGTATCCCTTTGGCAC+AGG 0.545996 4_1:+68541715 Msa0567210:CDS
GCATACGCAGGGTCTGGGAA+AGG 0.546643 4_1:+68543182 Msa0567210:three_prime_UTR
ACATGTTGTGTATACTCACC+GGG 0.550531 4_1:+68542099 Msa0567210:CDS
ACCCAATGAGTAGGATCAGT+AGG 0.552236 4_1:-68542204 None:intergenic
TGCCCTCAAGTAGTCTCACT+TGG 0.552797 4_1:+68542051 Msa0567210:CDS
GAGAGTAGTGGTGGTGTATG+TGG 0.555000 4_1:+68542297 Msa0567210:CDS
TACTCATTGGGTTTATGGAG+TGG 0.555908 4_1:+68542215 Msa0567210:CDS
CATGAAAAGGTTGATGAGGG+TGG 0.559660 4_1:-68541617 None:intergenic
CAACCAGGACCTGTGCCAAA+GGG 0.563262 4_1:-68541724 None:intergenic
TTGATGTGCATGTTATGTAT+GGG 0.566236 4_1:-68541765 None:intergenic
TAGACTAGACTTCATAGGAA+TGG 0.567381 4_1:-68543082 None:intergenic
TTATGTATGGGTTGAATAGT+GGG 0.567840 4_1:-68541753 None:intergenic
CATTATCATCCGATTACACT+AGG 0.569260 4_1:-68542927 None:intergenic
GGAAGTGGTGTATGAAATGG+AGG 0.572115 4_1:-68541842 None:intergenic
AAAGTTTGGTGACGTTTGCA+TGG 0.574117 4_1:-68541905 None:intergenic
GAAAGAGGTGGTAGTAGTGG+TGG 0.574477 4_1:-68541595 None:intergenic
CCCAATGAGTAGGATCAGTA+GGG 0.577746 4_1:-68542203 None:intergenic
GAGGAGAGATAGAGTCCCAA+AGG 0.583741 4_1:-68542413 None:intergenic
TGATTGTAGTGGTTATACTT+CGG 0.584725 4_1:+68542161 Msa0567210:CDS
GGTGGTGCAAGTAGACATGT+AGG 0.584778 4_1:-68541884 None:intergenic
AGGTTGATGAGGGTGGAAAG+AGG 0.585956 4_1:-68541610 None:intergenic
GCACACTGTTAGTGTTGTTG+AGG 0.594642 4_1:-68541668 None:intergenic
TACCAAGTGAGACTACTTGA+GGG 0.596440 4_1:-68542053 None:intergenic
ATACCAAGTGAGACTACTTG+AGG 0.598463 4_1:-68542054 None:intergenic
CTTAGAGAGAATGATTGTAG+TGG 0.610496 4_1:+68542150 Msa0567210:CDS
GTGGATGAAGATATTTGGAA+TGG 0.613981 4_1:-68541946 None:intergenic
TACTCACCGGGGAACCTAGA+CGG 0.615280 4_1:+68542111 Msa0567210:CDS
AACATACTGTTGTACATGGG+AGG 0.621855 4_1:-68542435 None:intergenic
ACTCCATAAACCCAATGAGT+AGG 0.626290 4_1:-68542213 None:intergenic
GAATCATGAAAAGGTTGATG+AGG 0.631423 4_1:-68541621 None:intergenic
CTAACAGTTAAGTCATTCAG+AGG 0.631884 4_1:+68542975 Msa0567210:three_prime_UTR
TTGATGAGGGTGGAAAGAGG+TGG 0.635922 4_1:-68541607 None:intergenic
ATACTGTTGTACATGGGAGG+AGG 0.638228 4_1:-68542432 None:intergenic
TGGAACACGAGCAAAGCCAA+TGG 0.642980 4_1:+68541567 Msa0567210:exon
GTATGTGGATATGATCCTCC+AGG 0.645044 4_1:+68542312 Msa0567210:CDS
AATCATGAAAAGGTTGATGA+GGG 0.650509 4_1:-68541620 None:intergenic
ACAAAGTTCGGGCATACGCA+GGG 0.650912 4_1:+68543171 Msa0567210:three_prime_UTR
AAGAGTAAAGAGAAGCACAA+AGG 0.652408 4_1:-68542029 None:intergenic
GTTTGGTGACGTTTGCATGG+TGG 0.670403 4_1:-68541902 None:intergenic
GTGGCATTGAAATATACTCA+TGG 0.674830 4_1:+68542234 Msa0567210:CDS
GTATTGAGCCACATGTGTCA+TGG 0.676021 4_1:-68541690 None:intergenic
AATCGGATGATAATGCTGCT+GGG 0.679814 4_1:+68542935 Msa0567210:exon
ACAGTTAAGTCATTCAGAGG+AGG 0.686509 4_1:+68542978 Msa0567210:three_prime_UTR
GGGGAACCTAGACGGCAAAG+GGG 0.692978 4_1:+68542119 Msa0567210:CDS
GTGGTGCAAGTAGACATGTA+GGG 0.696710 4_1:-68541883 None:intergenic
ACTAGTTGTGAGAGTAGTGG+TGG 0.700797 4_1:+68542288 Msa0567210:CDS
TGTACTAGTTGTGAGAGTAG+TGG 0.707622 4_1:+68542285 Msa0567210:CDS
TATGTATGGGTTGAATAGTG+GGG 0.729462 4_1:-68541752 None:intergenic
GTGCAAGTAGACATGTAGGG+TGG 0.743146 4_1:-68541880 None:intergenic
CATGTTGTGTATACTCACCG+GGG 0.745636 4_1:+68542100 Msa0567210:CDS
ACAGTGTGCCATGACACATG+TGG 0.759996 4_1:+68541682 Msa0567210:CDS
CAAACAAATCCACTTCCTGG+AGG 0.782247 4_1:-68542327 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATATAAGTAAGTAATT+AGG + chr4_1:68542568-68542587 Msa0567210:intron 10.0%
!! TATATATAAGTAAGTAATTA+GGG + chr4_1:68542569-68542588 Msa0567210:intron 10.0%
!! TTATATATAAGTAAGTAATT+AGG + chr4_1:68542568-68542587 Msa0567210:intron 10.0%
!! TATATATAAGTAAGTAATTA+GGG + chr4_1:68542569-68542588 Msa0567210:intron 10.0%
!! ATATATAAGTAAGTAATTAG+GGG + chr4_1:68542570-68542589 Msa0567210:intron 15.0%
!! TGTATTGTCAAAAAAATAAA+AGG + chr4_1:68543137-68543156 Msa0567210:three_prime_UTR 15.0%
!! GTATTGTCAAAAAAATAAAA+GGG + chr4_1:68543138-68543157 Msa0567210:three_prime_UTR 15.0%
!! TAACAATAAAAACTATCTTT+AGG + chr4_1:68543387-68543406 Msa0567210:three_prime_UTR 15.0%
!! ATATATAAGTAAGTAATTAG+GGG + chr4_1:68542570-68542589 Msa0567210:intron 15.0%
!! TGTATTGTCAAAAAAATAAA+AGG + chr4_1:68543137-68543156 Msa0567210:three_prime_UTR 15.0%
!! GTATTGTCAAAAAAATAAAA+GGG + chr4_1:68543138-68543157 Msa0567210:three_prime_UTR 15.0%
!!! GTCTTTTTTAATTTTCATAC+AGG + chr4_1:68542536-68542555 Msa0567210:intron 20.0%
!! AAAGTACATTCAAAGAAAAA+TGG + chr4_1:68543041-68543060 Msa0567210:three_prime_UTR 20.0%
!!! TTTTTTTTTTTGTACAAGTC+TGG + chr4_1:68543114-68543133 Msa0567210:three_prime_UTR 20.0%
!! TATTCAACATCAATATGTAA+TGG - chr4_1:68543369-68543388 None:intergenic 20.0%
!!! GTCTTTTTTAATTTTCATAC+AGG + chr4_1:68542536-68542555 Msa0567210:intron 20.0%
!! AAAGTACATTCAAAGAAAAA+TGG + chr4_1:68543041-68543060 Msa0567210:three_prime_UTR 20.0%
!!! TTTTTTTTTTTGTACAAGTC+TGG + chr4_1:68543114-68543133 Msa0567210:three_prime_UTR 20.0%
!! TATTCAACATCAATATGTAA+TGG - chr4_1:68543369-68543388 None:intergenic 20.0%
!!! AAATGGTTGAACTTTTTTCT+TGG - chr4_1:68541990-68542009 None:intergenic 25.0%
! AAAAACATACTGTTGTACAT+GGG - chr4_1:68542441-68542460 None:intergenic 25.0%
! AAAGAAACAACAAAAAGAGA+AGG - chr4_1:68542464-68542483 None:intergenic 25.0%
!! ATTTTCTGAGTACAAGAAAA+AGG + chr4_1:68542649-68542668 Msa0567210:intron 25.0%
! CAAGAAAAAGGAAAAATAGA+TGG + chr4_1:68542661-68542680 Msa0567210:intron 25.0%
! AAAAAGGAAAAATAGATGGT+TGG + chr4_1:68542665-68542684 Msa0567210:intron 25.0%
! AAAACAATATGCCAAAGTAA+TGG + chr4_1:68542730-68542749 Msa0567210:intron 25.0%
! AAACAATATGCCAAAGTAAT+GGG + chr4_1:68542731-68542750 Msa0567210:intron 25.0%
! ATAATAGTTACCCATTACTT+TGG - chr4_1:68542744-68542763 None:intergenic 25.0%
! TATTATTCTGTACACTTGAA+AGG + chr4_1:68542758-68542777 Msa0567210:intron 25.0%
!!! TTTATATTGATTCTCTCTCT+TGG + chr4_1:68542804-68542823 Msa0567210:intron 25.0%
!! TAACTTTTGTGCATTAAAGA+AGG - chr4_1:68543014-68543033 None:intergenic 25.0%
!! TCTTTGAATGTACTTTTCTA+AGG - chr4_1:68543037-68543056 None:intergenic 25.0%
! TTTGTGTACAATACATCAAA+TGG - chr4_1:68543214-68543233 None:intergenic 25.0%
!!! CACAAATTTACCTTGTTTTT+AGG + chr4_1:68543228-68543247 Msa0567210:three_prime_UTR 25.0%
! CTCTGTAAAAAAAAATTGCA+TGG + chr4_1:68543330-68543349 Msa0567210:three_prime_UTR 25.0%
!!! AAATGGTTGAACTTTTTTCT+TGG - chr4_1:68541990-68542009 None:intergenic 25.0%
! AAAAACATACTGTTGTACAT+GGG - chr4_1:68542441-68542460 None:intergenic 25.0%
! AAAGAAACAACAAAAAGAGA+AGG - chr4_1:68542464-68542483 None:intergenic 25.0%
!! ATTTTCTGAGTACAAGAAAA+AGG + chr4_1:68542649-68542668 Msa0567210:intron 25.0%
! CAAGAAAAAGGAAAAATAGA+TGG + chr4_1:68542661-68542680 Msa0567210:intron 25.0%
! AAAAAGGAAAAATAGATGGT+TGG + chr4_1:68542665-68542684 Msa0567210:intron 25.0%
! AAAACAATATGCCAAAGTAA+TGG + chr4_1:68542730-68542749 Msa0567210:intron 25.0%
! AAACAATATGCCAAAGTAAT+GGG + chr4_1:68542731-68542750 Msa0567210:intron 25.0%
! ATAATAGTTACCCATTACTT+TGG - chr4_1:68542744-68542763 None:intergenic 25.0%
! TATTATTCTGTACACTTGAA+AGG + chr4_1:68542758-68542777 Msa0567210:intron 25.0%
!!! TTTATATTGATTCTCTCTCT+TGG + chr4_1:68542804-68542823 Msa0567210:intron 25.0%
!! TAACTTTTGTGCATTAAAGA+AGG - chr4_1:68543014-68543033 None:intergenic 25.0%
!! TCTTTGAATGTACTTTTCTA+AGG - chr4_1:68543037-68543056 None:intergenic 25.0%
! TTTGTGTACAATACATCAAA+TGG - chr4_1:68543214-68543233 None:intergenic 25.0%
!!! CACAAATTTACCTTGTTTTT+AGG + chr4_1:68543228-68543247 Msa0567210:three_prime_UTR 25.0%
! CTCTGTAAAAAAAAATTGCA+TGG + chr4_1:68543330-68543349 Msa0567210:three_prime_UTR 25.0%
!! AATCATGAAAAGGTTGATGA+GGG - chr4_1:68541623-68541642 None:intergenic 30.0%
CTAAGATGAGAATCATGAAA+AGG - chr4_1:68541633-68541652 None:intergenic 30.0%
! TTATGTATGGGTTGAATAGT+GGG - chr4_1:68541756-68541775 None:intergenic 30.0%
TTGATGTGCATGTTATGTAT+GGG - chr4_1:68541768-68541787 None:intergenic 30.0%
TTTGATGTGCATGTTATGTA+TGG - chr4_1:68541769-68541788 None:intergenic 30.0%
TACATAACATGCACATCAAA+TGG + chr4_1:68541769-68541788 Msa0567210:CDS 30.0%
TGTATGAAATGGAGGTTATA+GGG - chr4_1:68541837-68541856 None:intergenic 30.0%
GTTAAATCAATGCCAAAGTT+TGG - chr4_1:68541922-68541941 None:intergenic 30.0%
TGAAAGTGGATGAAGATATT+TGG - chr4_1:68541954-68541973 None:intergenic 30.0%
!! ATCAAAAGAAGTGTCACAAA+TGG - chr4_1:68542007-68542026 None:intergenic 30.0%
TATACACAACATGTGTTAGT+AGG - chr4_1:68542093-68542112 None:intergenic 30.0%
TGATTGTAGTGGTTATACTT+CGG + chr4_1:68542161-68542180 Msa0567210:CDS 30.0%
! GGATTTGTTTGTGTTTGTAA+AGG + chr4_1:68542339-68542358 Msa0567210:CDS 30.0%
TTTGTTTGTGTTTGTAAAGG+TGG + chr4_1:68542342-68542361 Msa0567210:CDS 30.0%
ATCAAAACCAAGATTTCCTT+TGG + chr4_1:68542397-68542416 Msa0567210:CDS 30.0%
TCAAAACCAAGATTTCCTTT+GGG + chr4_1:68542398-68542417 Msa0567210:CDS 30.0%
GAAAAACATACTGTTGTACA+TGG - chr4_1:68542442-68542461 None:intergenic 30.0%
! TTTACATTCCCCATAGTTTT+CGG + chr4_1:68542513-68542532 Msa0567210:intron 30.0%
AAAAAAGACCCGAAAACTAT+GGG - chr4_1:68542525-68542544 None:intergenic 30.0%
TAAAAAAGACCCGAAAACTA+TGG - chr4_1:68542526-68542545 None:intergenic 30.0%
GAAATGAGTCAAATGACTAT+TGG + chr4_1:68542592-68542611 Msa0567210:intron 30.0%
AGATAACAATACACCAAAAG+TGG - chr4_1:68543312-68543331 None:intergenic 30.0%
!! AATCATGAAAAGGTTGATGA+GGG - chr4_1:68541623-68541642 None:intergenic 30.0%
CTAAGATGAGAATCATGAAA+AGG - chr4_1:68541633-68541652 None:intergenic 30.0%
! TTATGTATGGGTTGAATAGT+GGG - chr4_1:68541756-68541775 None:intergenic 30.0%
TTGATGTGCATGTTATGTAT+GGG - chr4_1:68541768-68541787 None:intergenic 30.0%
TTTGATGTGCATGTTATGTA+TGG - chr4_1:68541769-68541788 None:intergenic 30.0%
TACATAACATGCACATCAAA+TGG + chr4_1:68541769-68541788 Msa0567210:CDS 30.0%
TGTATGAAATGGAGGTTATA+GGG - chr4_1:68541837-68541856 None:intergenic 30.0%
GTTAAATCAATGCCAAAGTT+TGG - chr4_1:68541922-68541941 None:intergenic 30.0%
TGAAAGTGGATGAAGATATT+TGG - chr4_1:68541954-68541973 None:intergenic 30.0%
!! ATCAAAAGAAGTGTCACAAA+TGG - chr4_1:68542007-68542026 None:intergenic 30.0%
TATACACAACATGTGTTAGT+AGG - chr4_1:68542093-68542112 None:intergenic 30.0%
TGATTGTAGTGGTTATACTT+CGG + chr4_1:68542161-68542180 Msa0567210:CDS 30.0%
! GGATTTGTTTGTGTTTGTAA+AGG + chr4_1:68542339-68542358 Msa0567210:CDS 30.0%
TTTGTTTGTGTTTGTAAAGG+TGG + chr4_1:68542342-68542361 Msa0567210:CDS 30.0%
ATCAAAACCAAGATTTCCTT+TGG + chr4_1:68542397-68542416 Msa0567210:CDS 30.0%
TCAAAACCAAGATTTCCTTT+GGG + chr4_1:68542398-68542417 Msa0567210:CDS 30.0%
GAAAAACATACTGTTGTACA+TGG - chr4_1:68542442-68542461 None:intergenic 30.0%
! TTTACATTCCCCATAGTTTT+CGG + chr4_1:68542513-68542532 Msa0567210:intron 30.0%
AAAAAAGACCCGAAAACTAT+GGG - chr4_1:68542525-68542544 None:intergenic 30.0%
TAAAAAAGACCCGAAAACTA+TGG - chr4_1:68542526-68542545 None:intergenic 30.0%
GAAATGAGTCAAATGACTAT+TGG + chr4_1:68542592-68542611 Msa0567210:intron 30.0%
AGATAACAATACACCAAAAG+TGG - chr4_1:68543312-68543331 None:intergenic 30.0%
!! GAATCATGAAAAGGTTGATG+AGG - chr4_1:68541624-68541643 None:intergenic 35.0%
ATACAAGTCAAGTATCCCTT+TGG + chr4_1:68541709-68541728 Msa0567210:CDS 35.0%
! TATGTATGGGTTGAATAGTG+GGG - chr4_1:68541755-68541774 None:intergenic 35.0%
! GTTATGTATGGGTTGAATAG+TGG - chr4_1:68541757-68541776 None:intergenic 35.0%
GTGTATGAAATGGAGGTTAT+AGG - chr4_1:68541838-68541857 None:intergenic 35.0%
GTGGATGAAGATATTTGGAA+TGG - chr4_1:68541949-68541968 None:intergenic 35.0%
!!! AACTTTTTTCTTGGCAAGAG+AGG - chr4_1:68541981-68542000 None:intergenic 35.0%
! AAGAGTAAAGAGAAGCACAA+AGG - chr4_1:68542032-68542051 None:intergenic 35.0%
GTGTTAGTAGGAGAAAAAAG+AGG - chr4_1:68542081-68542100 None:intergenic 35.0%
CTTAGAGAGAATGATTGTAG+TGG + chr4_1:68542150-68542169 Msa0567210:CDS 35.0%
! GTGGCATTGAAATATACTCA+TGG + chr4_1:68542234-68542253 Msa0567210:CDS 35.0%
CTCACAACTAGTACATTTAG+TGG - chr4_1:68542280-68542299 None:intergenic 35.0%
GATCGTAATTAGAGCAATCA+AGG - chr4_1:68542380-68542399 None:intergenic 35.0%
! TTACATTCCCCATAGTTTTC+GGG + chr4_1:68542514-68542533 Msa0567210:intron 35.0%
AAAAAGACCCGAAAACTATG+GGG - chr4_1:68542524-68542543 None:intergenic 35.0%
AAAAATAGATGGTTGGACGA+TGG + chr4_1:68542672-68542691 Msa0567210:intron 35.0%
CTGTTCTGTTATGAACAGTT+CGG + chr4_1:68542866-68542885 Msa0567210:intron 35.0%
! CATTTTCAGCCTAGTGTAAT+CGG + chr4_1:68542918-68542937 Msa0567210:exon 35.0%
CATTATCATCCGATTACACT+AGG - chr4_1:68542930-68542949 None:intergenic 35.0%
CTAACAGTTAAGTCATTCAG+AGG + chr4_1:68542975-68542994 Msa0567210:three_prime_UTR 35.0%
TAGACTAGACTTCATAGGAA+TGG - chr4_1:68543085-68543104 None:intergenic 35.0%
TACACTAGACTAGACTTCAT+AGG - chr4_1:68543090-68543109 None:intergenic 35.0%
CAGTCTCTTACCTAAAAACA+AGG - chr4_1:68543241-68543260 None:intergenic 35.0%
!! GAATCATGAAAAGGTTGATG+AGG - chr4_1:68541624-68541643 None:intergenic 35.0%
ATACAAGTCAAGTATCCCTT+TGG + chr4_1:68541709-68541728 Msa0567210:CDS 35.0%
! TATGTATGGGTTGAATAGTG+GGG - chr4_1:68541755-68541774 None:intergenic 35.0%
! GTTATGTATGGGTTGAATAG+TGG - chr4_1:68541757-68541776 None:intergenic 35.0%
GTGTATGAAATGGAGGTTAT+AGG - chr4_1:68541838-68541857 None:intergenic 35.0%
GTGGATGAAGATATTTGGAA+TGG - chr4_1:68541949-68541968 None:intergenic 35.0%
!!! AACTTTTTTCTTGGCAAGAG+AGG - chr4_1:68541981-68542000 None:intergenic 35.0%
! AAGAGTAAAGAGAAGCACAA+AGG - chr4_1:68542032-68542051 None:intergenic 35.0%
GTGTTAGTAGGAGAAAAAAG+AGG - chr4_1:68542081-68542100 None:intergenic 35.0%
CTTAGAGAGAATGATTGTAG+TGG + chr4_1:68542150-68542169 Msa0567210:CDS 35.0%
! GTGGCATTGAAATATACTCA+TGG + chr4_1:68542234-68542253 Msa0567210:CDS 35.0%
CTCACAACTAGTACATTTAG+TGG - chr4_1:68542280-68542299 None:intergenic 35.0%
GATCGTAATTAGAGCAATCA+AGG - chr4_1:68542380-68542399 None:intergenic 35.0%
! TTACATTCCCCATAGTTTTC+GGG + chr4_1:68542514-68542533 Msa0567210:intron 35.0%
AAAAAGACCCGAAAACTATG+GGG - chr4_1:68542524-68542543 None:intergenic 35.0%
AAAAATAGATGGTTGGACGA+TGG + chr4_1:68542672-68542691 Msa0567210:intron 35.0%
CTGTTCTGTTATGAACAGTT+CGG + chr4_1:68542866-68542885 Msa0567210:intron 35.0%
! CATTTTCAGCCTAGTGTAAT+CGG + chr4_1:68542918-68542937 Msa0567210:exon 35.0%
CATTATCATCCGATTACACT+AGG - chr4_1:68542930-68542949 None:intergenic 35.0%
CTAACAGTTAAGTCATTCAG+AGG + chr4_1:68542975-68542994 Msa0567210:three_prime_UTR 35.0%
TAGACTAGACTTCATAGGAA+TGG - chr4_1:68543085-68543104 None:intergenic 35.0%
TACACTAGACTAGACTTCAT+AGG - chr4_1:68543090-68543109 None:intergenic 35.0%
CAGTCTCTTACCTAAAAACA+AGG - chr4_1:68543241-68543260 None:intergenic 35.0%
!!! TGTGAGTTTTGAGGATGAGT+TGG - chr4_1:68541804-68541823 None:intergenic 40.0%
! ATGAGGATGTGTGAGTTTTG+AGG - chr4_1:68541813-68541832 None:intergenic 40.0%
AATGGAGGTTATAGGGTATG+AGG - chr4_1:68541830-68541849 None:intergenic 40.0%
AGTGGAAGTGGTGTATGAAA+TGG - chr4_1:68541848-68541867 None:intergenic 40.0%
!! AAAGTTTGGTGACGTTTGCA+TGG - chr4_1:68541908-68541927 None:intergenic 40.0%
ATGCAAACGTCACCAAACTT+TGG + chr4_1:68541907-68541926 Msa0567210:CDS 40.0%
!!! TTTTTTCTTGGCAAGAGAGG+AGG - chr4_1:68541978-68541997 None:intergenic 40.0%
TACCAAGTGAGACTACTTGA+GGG - chr4_1:68542056-68542075 None:intergenic 40.0%
ATACCAAGTGAGACTACTTG+AGG - chr4_1:68542057-68542076 None:intergenic 40.0%
CACATGTTGTGTATACTCAC+CGG + chr4_1:68542098-68542117 Msa0567210:CDS 40.0%
ACATGTTGTGTATACTCACC+GGG + chr4_1:68542099-68542118 Msa0567210:CDS 40.0%
! TATACTTCGGTTGTGTCACT+TGG + chr4_1:68542174-68542193 Msa0567210:CDS 40.0%
GATCCTACTCATTGGGTTTA+TGG + chr4_1:68542210-68542229 Msa0567210:CDS 40.0%
ACTCCATAAACCCAATGAGT+AGG - chr4_1:68542216-68542235 None:intergenic 40.0%
TACTCATTGGGTTTATGGAG+TGG + chr4_1:68542215-68542234 Msa0567210:CDS 40.0%
TGTACTAGTTGTGAGAGTAG+TGG + chr4_1:68542285-68542304 Msa0567210:CDS 40.0%
ACACAAACAAATCCACTTCC+TGG - chr4_1:68542333-68542352 None:intergenic 40.0%
TAGAGTCCCAAAGGAAATCT+TGG - chr4_1:68542407-68542426 None:intergenic 40.0%
AACATACTGTTGTACATGGG+AGG - chr4_1:68542438-68542457 None:intergenic 40.0%
CGAACTGTTCATAACAGAAC+AGG - chr4_1:68542868-68542887 None:intergenic 40.0%
TATGAACAGTTCGGAATGTC+TGG + chr4_1:68542875-68542894 Msa0567210:intron 40.0%
GAAAATGATACCAGCCAAGA+TGG - chr4_1:68542905-68542924 None:intergenic 40.0%
! TAATCGGATGATAATGCTGC+TGG + chr4_1:68542934-68542953 Msa0567210:exon 40.0%
! AATCGGATGATAATGCTGCT+GGG + chr4_1:68542935-68542954 Msa0567210:exon 40.0%
ACAGTTAAGTCATTCAGAGG+AGG + chr4_1:68542978-68542997 Msa0567210:three_prime_UTR 40.0%
!!! TGTGAGTTTTGAGGATGAGT+TGG - chr4_1:68541804-68541823 None:intergenic 40.0%
! ATGAGGATGTGTGAGTTTTG+AGG - chr4_1:68541813-68541832 None:intergenic 40.0%
AATGGAGGTTATAGGGTATG+AGG - chr4_1:68541830-68541849 None:intergenic 40.0%
AGTGGAAGTGGTGTATGAAA+TGG - chr4_1:68541848-68541867 None:intergenic 40.0%
!! AAAGTTTGGTGACGTTTGCA+TGG - chr4_1:68541908-68541927 None:intergenic 40.0%
ATGCAAACGTCACCAAACTT+TGG + chr4_1:68541907-68541926 Msa0567210:CDS 40.0%
!!! TTTTTTCTTGGCAAGAGAGG+AGG - chr4_1:68541978-68541997 None:intergenic 40.0%
TACCAAGTGAGACTACTTGA+GGG - chr4_1:68542056-68542075 None:intergenic 40.0%
ATACCAAGTGAGACTACTTG+AGG - chr4_1:68542057-68542076 None:intergenic 40.0%
CACATGTTGTGTATACTCAC+CGG + chr4_1:68542098-68542117 Msa0567210:CDS 40.0%
ACATGTTGTGTATACTCACC+GGG + chr4_1:68542099-68542118 Msa0567210:CDS 40.0%
! TATACTTCGGTTGTGTCACT+TGG + chr4_1:68542174-68542193 Msa0567210:CDS 40.0%
GATCCTACTCATTGGGTTTA+TGG + chr4_1:68542210-68542229 Msa0567210:CDS 40.0%
ACTCCATAAACCCAATGAGT+AGG - chr4_1:68542216-68542235 None:intergenic 40.0%
TACTCATTGGGTTTATGGAG+TGG + chr4_1:68542215-68542234 Msa0567210:CDS 40.0%
TGTACTAGTTGTGAGAGTAG+TGG + chr4_1:68542285-68542304 Msa0567210:CDS 40.0%
ACACAAACAAATCCACTTCC+TGG - chr4_1:68542333-68542352 None:intergenic 40.0%
TAGAGTCCCAAAGGAAATCT+TGG - chr4_1:68542407-68542426 None:intergenic 40.0%
AACATACTGTTGTACATGGG+AGG - chr4_1:68542438-68542457 None:intergenic 40.0%
CGAACTGTTCATAACAGAAC+AGG - chr4_1:68542868-68542887 None:intergenic 40.0%
TATGAACAGTTCGGAATGTC+TGG + chr4_1:68542875-68542894 Msa0567210:intron 40.0%
GAAAATGATACCAGCCAAGA+TGG - chr4_1:68542905-68542924 None:intergenic 40.0%
! TAATCGGATGATAATGCTGC+TGG + chr4_1:68542934-68542953 Msa0567210:exon 40.0%
! AATCGGATGATAATGCTGCT+GGG + chr4_1:68542935-68542954 Msa0567210:exon 40.0%
ACAGTTAAGTCATTCAGAGG+AGG + chr4_1:68542978-68542997 Msa0567210:three_prime_UTR 40.0%
!! CATGAAAAGGTTGATGAGGG+TGG - chr4_1:68541620-68541639 None:intergenic 45.0%
! GTTAGTGTTGTTGAGGCTGT+GGG - chr4_1:68541664-68541683 None:intergenic 45.0%
! TGTTAGTGTTGTTGAGGCTG+TGG - chr4_1:68541665-68541684 None:intergenic 45.0%
! GCACACTGTTAGTGTTGTTG+AGG - chr4_1:68541671-68541690 None:intergenic 45.0%
GTATTGAGCCACATGTGTCA+TGG - chr4_1:68541693-68541712 None:intergenic 45.0%
GGAAGTGGTGTATGAAATGG+AGG - chr4_1:68541845-68541864 None:intergenic 45.0%
GTGGTGCAAGTAGACATGTA+GGG - chr4_1:68541886-68541905 None:intergenic 45.0%
CATGTTGTGTATACTCACCG+GGG + chr4_1:68542100-68542119 Msa0567210:CDS 45.0%
ACCCTACTGATCCTACTCAT+TGG + chr4_1:68542202-68542221 Msa0567210:CDS 45.0%
CCCAATGAGTAGGATCAGTA+GGG - chr4_1:68542206-68542225 None:intergenic 45.0%
CCCTACTGATCCTACTCATT+GGG + chr4_1:68542203-68542222 Msa0567210:CDS 45.0%
ACCCAATGAGTAGGATCAGT+AGG - chr4_1:68542207-68542226 None:intergenic 45.0%
ACTAGTTGTGAGAGTAGTGG+TGG + chr4_1:68542288-68542307 Msa0567210:CDS 45.0%
GTATGTGGATATGATCCTCC+AGG + chr4_1:68542312-68542331 Msa0567210:CDS 45.0%
CAAACAAATCCACTTCCTGG+AGG - chr4_1:68542330-68542349 None:intergenic 45.0%
ATACTGTTGTACATGGGAGG+AGG - chr4_1:68542435-68542454 None:intergenic 45.0%
! GAATGTCTGGAGTTCCATCT+TGG + chr4_1:68542888-68542907 Msa0567210:CDS 45.0%
! AAGTGGAAGCTTTGACGCAA+AGG - chr4_1:68543295-68543314 None:intergenic 45.0%
! TGCGTCAAAGCTTCCACTTT+TGG + chr4_1:68543296-68543315 Msa0567210:three_prime_UTR 45.0%
!! CATGAAAAGGTTGATGAGGG+TGG - chr4_1:68541620-68541639 None:intergenic 45.0%
! GTTAGTGTTGTTGAGGCTGT+GGG - chr4_1:68541664-68541683 None:intergenic 45.0%
! TGTTAGTGTTGTTGAGGCTG+TGG - chr4_1:68541665-68541684 None:intergenic 45.0%
! GCACACTGTTAGTGTTGTTG+AGG - chr4_1:68541671-68541690 None:intergenic 45.0%
GTATTGAGCCACATGTGTCA+TGG - chr4_1:68541693-68541712 None:intergenic 45.0%
GGAAGTGGTGTATGAAATGG+AGG - chr4_1:68541845-68541864 None:intergenic 45.0%
GTGGTGCAAGTAGACATGTA+GGG - chr4_1:68541886-68541905 None:intergenic 45.0%
CATGTTGTGTATACTCACCG+GGG + chr4_1:68542100-68542119 Msa0567210:CDS 45.0%
ACCCTACTGATCCTACTCAT+TGG + chr4_1:68542202-68542221 Msa0567210:CDS 45.0%
CCCAATGAGTAGGATCAGTA+GGG - chr4_1:68542206-68542225 None:intergenic 45.0%
CCCTACTGATCCTACTCATT+GGG + chr4_1:68542203-68542222 Msa0567210:CDS 45.0%
ACCCAATGAGTAGGATCAGT+AGG - chr4_1:68542207-68542226 None:intergenic 45.0%
ACTAGTTGTGAGAGTAGTGG+TGG + chr4_1:68542288-68542307 Msa0567210:CDS 45.0%
GTATGTGGATATGATCCTCC+AGG + chr4_1:68542312-68542331 Msa0567210:CDS 45.0%
CAAACAAATCCACTTCCTGG+AGG - chr4_1:68542330-68542349 None:intergenic 45.0%
ATACTGTTGTACATGGGAGG+AGG - chr4_1:68542435-68542454 None:intergenic 45.0%
! GAATGTCTGGAGTTCCATCT+TGG + chr4_1:68542888-68542907 Msa0567210:CDS 45.0%
! AAGTGGAAGCTTTGACGCAA+AGG - chr4_1:68543295-68543314 None:intergenic 45.0%
! TGCGTCAAAGCTTCCACTTT+TGG + chr4_1:68543296-68543315 Msa0567210:three_prime_UTR 45.0%
TGGAACACGAGCAAAGCCAA+TGG + chr4_1:68541567-68541586 Msa0567210:exon 50.0%
! AGTAGTGGTGGTAGTGCCAT+TGG - chr4_1:68541586-68541605 None:intergenic 50.0%
GAAAGAGGTGGTAGTAGTGG+TGG - chr4_1:68541598-68541617 None:intergenic 50.0%
GTGGAAAGAGGTGGTAGTAG+TGG - chr4_1:68541601-68541620 None:intergenic 50.0%
TTGATGAGGGTGGAAAGAGG+TGG - chr4_1:68541610-68541629 None:intergenic 50.0%
!! AGGTTGATGAGGGTGGAAAG+AGG - chr4_1:68541613-68541632 None:intergenic 50.0%
ACAGTGTGCCATGACACATG+TGG + chr4_1:68541682-68541701 Msa0567210:CDS 50.0%
GTCAAGTATCCCTTTGGCAC+AGG + chr4_1:68541715-68541734 Msa0567210:CDS 50.0%
TGTGAGTGTGAGAGTGGAAG+TGG - chr4_1:68541860-68541879 None:intergenic 50.0%
GTGCAAGTAGACATGTAGGG+TGG - chr4_1:68541883-68541902 None:intergenic 50.0%
GGTGGTGCAAGTAGACATGT+AGG - chr4_1:68541887-68541906 None:intergenic 50.0%
!! GTTTGGTGACGTTTGCATGG+TGG - chr4_1:68541905-68541924 None:intergenic 50.0%
GCAAGAGAGGAGGATGAAAG+TGG - chr4_1:68541968-68541987 None:intergenic 50.0%
TGCCCTCAAGTAGTCTCACT+TGG + chr4_1:68542051-68542070 Msa0567210:CDS 50.0%
! GAGAGTAGTGGTGGTGTATG+TGG + chr4_1:68542297-68542316 Msa0567210:CDS 50.0%
GGATATGATCCTCCAGGAAG+TGG + chr4_1:68542318-68542337 Msa0567210:CDS 50.0%
GAGGAGAGATAGAGTCCCAA+AGG - chr4_1:68542416-68542435 None:intergenic 50.0%
GGCAGTCAGTGCACAAAGTT+CGG + chr4_1:68543159-68543178 Msa0567210:three_prime_UTR 50.0%
GCAGTCAGTGCACAAAGTTC+GGG + chr4_1:68543160-68543179 Msa0567210:three_prime_UTR 50.0%
ACAAAGTTCGGGCATACGCA+GGG + chr4_1:68543171-68543190 Msa0567210:three_prime_UTR 50.0%
TGGAACACGAGCAAAGCCAA+TGG + chr4_1:68541567-68541586 Msa0567210:exon 50.0%
! AGTAGTGGTGGTAGTGCCAT+TGG - chr4_1:68541586-68541605 None:intergenic 50.0%
GAAAGAGGTGGTAGTAGTGG+TGG - chr4_1:68541598-68541617 None:intergenic 50.0%
GTGGAAAGAGGTGGTAGTAG+TGG - chr4_1:68541601-68541620 None:intergenic 50.0%
TTGATGAGGGTGGAAAGAGG+TGG - chr4_1:68541610-68541629 None:intergenic 50.0%
!! AGGTTGATGAGGGTGGAAAG+AGG - chr4_1:68541613-68541632 None:intergenic 50.0%
ACAGTGTGCCATGACACATG+TGG + chr4_1:68541682-68541701 Msa0567210:CDS 50.0%
GTCAAGTATCCCTTTGGCAC+AGG + chr4_1:68541715-68541734 Msa0567210:CDS 50.0%
TGTGAGTGTGAGAGTGGAAG+TGG - chr4_1:68541860-68541879 None:intergenic 50.0%
GTGCAAGTAGACATGTAGGG+TGG - chr4_1:68541883-68541902 None:intergenic 50.0%
GGTGGTGCAAGTAGACATGT+AGG - chr4_1:68541887-68541906 None:intergenic 50.0%
!! GTTTGGTGACGTTTGCATGG+TGG - chr4_1:68541905-68541924 None:intergenic 50.0%
GCAAGAGAGGAGGATGAAAG+TGG - chr4_1:68541968-68541987 None:intergenic 50.0%
TGCCCTCAAGTAGTCTCACT+TGG + chr4_1:68542051-68542070 Msa0567210:CDS 50.0%
! GAGAGTAGTGGTGGTGTATG+TGG + chr4_1:68542297-68542316 Msa0567210:CDS 50.0%
GGATATGATCCTCCAGGAAG+TGG + chr4_1:68542318-68542337 Msa0567210:CDS 50.0%
GAGGAGAGATAGAGTCCCAA+AGG - chr4_1:68542416-68542435 None:intergenic 50.0%
GGCAGTCAGTGCACAAAGTT+CGG + chr4_1:68543159-68543178 Msa0567210:three_prime_UTR 50.0%
GCAGTCAGTGCACAAAGTTC+GGG + chr4_1:68543160-68543179 Msa0567210:three_prime_UTR 50.0%
ACAAAGTTCGGGCATACGCA+GGG + chr4_1:68543171-68543190 Msa0567210:three_prime_UTR 50.0%
TGTTGTTGAGGCTGTGGGTG+TGG - chr4_1:68541659-68541678 None:intergenic 55.0%
TATCCCTTTGGCACAGGTCC+TGG + chr4_1:68541721-68541740 Msa0567210:CDS 55.0%
CAACCAGGACCTGTGCCAAA+GGG - chr4_1:68541727-68541746 None:intergenic 55.0%
TTTGGCACAGGTCCTGGTTG+CGG + chr4_1:68541727-68541746 Msa0567210:CDS 55.0%
TACTCACCGGGGAACCTAGA+CGG + chr4_1:68542111-68542130 Msa0567210:CDS 55.0%
TCAACTCCCCTTTGCCGTCT+AGG - chr4_1:68542128-68542147 None:intergenic 55.0%
! GTCTGGAGTTCCATCTTGGC+TGG + chr4_1:68542892-68542911 Msa0567210:CDS 55.0%
CACAAAGTTCGGGCATACGC+AGG + chr4_1:68543170-68543189 Msa0567210:three_prime_UTR 55.0%
TGTTGTTGAGGCTGTGGGTG+TGG - chr4_1:68541659-68541678 None:intergenic 55.0%
TATCCCTTTGGCACAGGTCC+TGG + chr4_1:68541721-68541740 Msa0567210:CDS 55.0%
CAACCAGGACCTGTGCCAAA+GGG - chr4_1:68541727-68541746 None:intergenic 55.0%
TTTGGCACAGGTCCTGGTTG+CGG + chr4_1:68541727-68541746 Msa0567210:CDS 55.0%
TACTCACCGGGGAACCTAGA+CGG + chr4_1:68542111-68542130 Msa0567210:CDS 55.0%
TCAACTCCCCTTTGCCGTCT+AGG - chr4_1:68542128-68542147 None:intergenic 55.0%
! GTCTGGAGTTCCATCTTGGC+TGG + chr4_1:68542892-68542911 Msa0567210:CDS 55.0%
CACAAAGTTCGGGCATACGC+AGG + chr4_1:68543170-68543189 Msa0567210:three_prime_UTR 55.0%
GCAACCAGGACCTGTGCCAA+AGG - chr4_1:68541728-68541747 None:intergenic 60.0%
TTGGCACAGGTCCTGGTTGC+GGG + chr4_1:68541728-68541747 Msa0567210:CDS 60.0%
! AATAGTGGGGACCCGCAACC+AGG - chr4_1:68541742-68541761 None:intergenic 60.0%
GGGTGGTGTGAGTGTGAGAG+TGG - chr4_1:68541866-68541885 None:intergenic 60.0%
CCTTTGCCGTCTAGGTTCCC+CGG - chr4_1:68542120-68542139 None:intergenic 60.0%
CGGGGAACCTAGACGGCAAA+GGG + chr4_1:68542118-68542137 Msa0567210:CDS 60.0%
GGGGAACCTAGACGGCAAAG+GGG + chr4_1:68542119-68542138 Msa0567210:CDS 60.0%
TTCGGGCATACGCAGGGTCT+GGG + chr4_1:68543177-68543196 Msa0567210:three_prime_UTR 60.0%
GCATACGCAGGGTCTGGGAA+AGG + chr4_1:68543182-68543201 Msa0567210:three_prime_UTR 60.0%
GCAACCAGGACCTGTGCCAA+AGG - chr4_1:68541728-68541747 None:intergenic 60.0%
TTGGCACAGGTCCTGGTTGC+GGG + chr4_1:68541728-68541747 Msa0567210:CDS 60.0%
! AATAGTGGGGACCCGCAACC+AGG - chr4_1:68541742-68541761 None:intergenic 60.0%
GGGTGGTGTGAGTGTGAGAG+TGG - chr4_1:68541866-68541885 None:intergenic 60.0%
CCTTTGCCGTCTAGGTTCCC+CGG - chr4_1:68542120-68542139 None:intergenic 60.0%
CGGGGAACCTAGACGGCAAA+GGG + chr4_1:68542118-68542137 Msa0567210:CDS 60.0%
GGGGAACCTAGACGGCAAAG+GGG + chr4_1:68542119-68542138 Msa0567210:CDS 60.0%
TTCGGGCATACGCAGGGTCT+GGG + chr4_1:68543177-68543196 Msa0567210:three_prime_UTR 60.0%
GCATACGCAGGGTCTGGGAA+AGG + chr4_1:68543182-68543201 Msa0567210:three_prime_UTR 60.0%
CCGGGGAACCTAGACGGCAA+AGG + chr4_1:68542117-68542136 Msa0567210:CDS 65.0%
GTTCGGGCATACGCAGGGTC+TGG + chr4_1:68543176-68543195 Msa0567210:three_prime_UTR 65.0%
CCGGGGAACCTAGACGGCAA+AGG + chr4_1:68542117-68542136 Msa0567210:CDS 65.0%
GTTCGGGCATACGCAGGGTC+TGG + chr4_1:68543176-68543195 Msa0567210:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 68541566 68543408 68541566 ID=Msa0567210;Name=Msa0567210
chr4_1 mRNA 68541566 68543408 68541566 ID=Msa0567210-mRNA-1;Parent=Msa0567210;Name=Msa0567210-mRNA-1;_AED=0.00;_eAED=0.00;_QI=20|1|1|1|1|1|2|472|305
chr4_1 exon 68541566 68542450 68541566 ID=Msa0567210-mRNA-1:exon:22610;Parent=Msa0567210-mRNA-1
chr4_1 exon 68542884 68543408 68542884 ID=Msa0567210-mRNA-1:exon:22611;Parent=Msa0567210-mRNA-1
chr4_1 five_prime_UTR 68541566 68541585 68541566 ID=Msa0567210-mRNA-1:five_prime_utr;Parent=Msa0567210-mRNA-1
chr4_1 CDS 68541586 68542450 68541586 ID=Msa0567210-mRNA-1:cds;Parent=Msa0567210-mRNA-1
chr4_1 CDS 68542884 68542936 68542884 ID=Msa0567210-mRNA-1:cds;Parent=Msa0567210-mRNA-1
chr4_1 three_prime_UTR 68542937 68543408 68542937 ID=Msa0567210-mRNA-1:three_prime_utr;Parent=Msa0567210-mRNA-1
Gene Sequence

>Msa0567210

ATGGCACTACCACCACTACTACCACCTCTTTCCACCCTCATCAACCTTTTCATGATTCTCATCTTAGCATCCACACCCACAGCCTCAACAACACTAACAGTGTGCCATGACACATGTGGCTCAATACAAGTCAAGTATCCCTTTGGCACAGGTCCTGGTTGCGGGTCCCCACTATTCAACCCATACATAACATGCACATCAAATGGAACAATAGACCAACTCATCCTCAAAACTCACACATCCTCATACCCTATAACCTCCATTTCATACACCACTTCCACTCTCACACTCACACCACCCTACATGTCTACTTGCACCACCATGCAAACGTCACCAAACTTTGGCATTGATTTAACTGCACCATTCCAAATATCTTCATCCACTTTCATCCTCCTCTCTTGCCAAGAAAAAAGTTCAACCATTTGTGACACTTCTTTTGATTACCTTTGTGCTTCTCTTTACTCTTGCCCTCAAGTAGTCTCACTTGGTATGCCTCTTTTTTCTCCTACTAACACATGTTGTGTATACTCACCGGGGAACCTAGACGGCAAAGGGGAGTTGAATCTTAGAGAGAATGATTGTAGTGGTTATACTTCGGTTGTGTCACTTGGTGATAACCCTACTGATCCTACTCATTGGGTTTATGGAGTGGCATTGAAATATACTCATGGTGCTTTTGATAACTTTGCAACCACTAAATGTACTAGTTGTGAGAGTAGTGGTGGTGTATGTGGATATGATCCTCCAGGAAGTGGATTTGTTTGTGTTTGTAAAGGTGGATATAATACTAGCCTTGATTGCTCTAATTACGATCAAAACCAAGATTTCCTTTGGGACTCTATCTCTCCTCCTCCCATGTACAACATTCGGAATGTCTGGAGTTCCATCTTGGCTGGTATCATTTTCAGCCTAGTGTAA
Protein sequence

>Msa0567210

MALPPLLPPLSTLINLFMILILASTPTASTTLTVCHDTCGSIQVKYPFGTGPGCGSPLFNPYITCTSNGTIDQLILKTHTSSYPITSISYTTSTLTLTPPYMSTCTTMQTSPNFGIDLTAPFQISSSTFILLSCQEKSSTICDTSFDYLCASLYSCPQVVSLGMPLFSPTNTCCVYSPGNLDGKGELNLRENDCSGYTSVVSLGDNPTDPTHWVYGVALKYTHGAFDNFATTKCTSCESSGGVCGYDPPGSGFVCVCKGGYNTSLDCSNYDQNQDFLWDSISPPPMYNIRNVWSSILAGIIFSLV*