AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0493640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0493640 MtrunA17_Chr3g0138931 99.369 951 6 0 1 951 1 951 0.0 1941
Msa0493640 MtrunA17_Chr1g0148031 92.534 951 71 0 1 951 1 951 0.0 1789
Msa0493640 MtrunA17_Chr4g0072131 86.920 948 122 1 4 951 7 952 0.0 1702
Msa0493640 MtrunA17_Chr2g0298031 86.870 952 123 2 2 951 7 958 0.0 1680
Msa0493640 MtrunA17_Chr1g0147981 87.179 936 119 1 16 951 33 967 0.0 1652
Msa0493640 MtrunA17_Chr8g0365021 83.795 975 132 3 1 951 71 1043 0.0 1647
Msa0493640 MtrunA17_Chr2g0333721 83.949 947 152 0 5 951 3 949 0.0 1636
Msa0493640 MtrunA17_Chr4g0065481 81.924 946 167 1 6 951 7 948 0.0 1590
Msa0493640 MtrunA17_Chr4g0059961 80.967 951 176 2 5 951 9 958 0.0 1561
Msa0493640 MtrunA17_Chr6g0452721 78.759 951 197 2 5 951 7 956 0.0 1536
Msa0493640 MtrunA17_Chr2g0304941 81.506 903 163 1 4 906 5 903 0.0 1513
Msa0493640 MtrunA17_Chr8g0335291 74.819 965 226 5 2 951 4 966 0.0 1425
Msa0493640 MtrunA17_Chr7g0276551 74.719 712 175 3 240 951 6 712 0.0 1113
Msa0493640 MtrunA17_Chr7g0276541 73.279 247 54 1 7 241 14 260 1.23e-109 340
Msa0493640 MtrunA17_Chr8g0381711 24.820 693 449 16 34 672 29 703 1.10e-50 193
Msa0493640 MtrunA17_Chr1g0173111 25.211 710 444 19 34 671 132 826 9.82e-48 184
Msa0493640 MtrunA17_Chr8g0382071 25.034 731 431 24 32 671 125 829 7.17e-47 182
Msa0493640 MtrunA17_Chr4g0020551 23.262 705 450 20 32 656 64 757 9.82e-46 177
Msa0493640 MtrunA17_Chr8g0355421 25.487 718 448 20 21 660 112 820 1.16e-45 178
Msa0493640 MtrunA17_Chr5g0401211 23.944 710 440 19 43 674 145 832 2.16e-45 177
Msa0493640 MtrunA17_Chr3g0134771 25.440 739 441 24 21 674 121 834 3.58e-45 176
Msa0493640 MtrunA17_Chr4g0054021 25.554 587 366 14 135 656 165 745 3.99e-45 176
Msa0493640 MtrunA17_Chr2g0298871 25.106 709 419 21 43 656 183 874 1.97e-44 174
Msa0493640 MtrunA17_Chr7g0260401 25.535 607 369 14 133 656 245 851 2.44e-42 167
Msa0493640 MtrunA17_Chr4g0002331 24.542 709 443 21 34 656 185 887 9.41e-41 162
Msa0493640 MtrunA17_Chr6g0456201 23.387 744 468 21 9 656 81 818 6.18e-40 160
Msa0493640 MtrunA17_Chr3g0134951 31.176 340 197 10 424 731 510 844 1.03e-33 140
Msa0493640 MtrunA17_Chr3g0134951 30.172 348 204 10 34 348 23 364 5.17e-28 122
Msa0493640 MtrunA17_Chr5g0413881 72.727 77 20 1 390 465 6 82 7.09e-33 124
Msa0493640 MtrunA17_Chr5g0413881 93.333 30 2 0 660 689 83 112 4.90e-11 62.0
Msa0493640 MtrunA17_Chr8g0346461 29.282 362 216 9 21 342 19 380 2.43e-31 132
Msa0493640 MtrunA17_Chr8g0346461 28.369 423 236 13 368 732 470 883 1.58e-27 120
Msa0493640 MtrunA17_Chr7g0263361 28.032 371 219 10 21 345 31 399 1.58e-29 127
Msa0493640 MtrunA17_Chr7g0263361 34.962 266 152 7 481 730 626 886 7.30e-26 115
Msa0493640 MtrunA17_Chr1g0181471 85.246 61 9 0 454 514 29 89 1.65e-29 112
Msa0493640 MtrunA17_Chr5g0423831 68.919 74 23 0 390 463 55 128 1.66e-28 114
Msa0493640 MtrunA17_Chr6g0474841 68.919 74 23 0 390 463 55 128 1.82e-28 114
Msa0493640 MtrunA17_Chr2g0297051 23.089 615 387 15 72 656 408 966 2.00e-26 117
Msa0493640 MtrunA17_Chr8g0339181 24.319 551 333 13 143 667 430 922 5.39e-23 105
Msa0493640 MtrunA17_Chr4g0052521 22.049 576 357 14 130 667 427 948 3.08e-22 103
Msa0493640 MtrunA17_Chr4g0050431 24.869 571 333 18 126 660 366 876 8.87e-21 98.6
Msa0493640 MtrunA17_Chr8g0340261 25.899 278 183 5 402 656 93 370 8.78e-20 94.4
Msa0493640 MtrunA17_Chr4g0071991 23.574 666 388 27 63 685 106 693 9.65e-19 92.0
Msa0493640 MtrunA17_Chr8g0374391 30.846 201 104 3 480 677 34 202 1.64e-18 85.9
Msa0493640 MtrunA17_Chr2g0334231 29.004 231 138 5 137 341 274 504 1.80e-18 90.1
Msa0493640 MtrunA17_Chr8g0374331 30.348 201 105 3 480 677 41 209 2.41e-18 85.9
Msa0493640 MtrunA17_Chr2g0297871 24.453 548 332 18 155 690 62 539 1.02e-16 85.1
Msa0493640 MtrunA17_Chr8g0340271 23.636 330 214 11 43 338 122 447 2.81e-16 83.2
Msa0493640 MtrunA17_Chr3g0136331 23.252 572 350 17 153 694 363 875 7.19e-16 82.8
Msa0493640 MtrunA17_Chr5g0397621 28.191 188 102 3 480 664 692 849 6.78e-14 76.3
Msa0493640 MtrunA17_Chr2g0334221 25.957 235 152 4 391 603 100 334 2.89e-13 72.4
Msa0493640 MtrunA17_Chr1g0148011 66.667 42 13 1 860 901 71 111 1.52e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0493640 AT2G24520.2 85.985 949 133 0 3 951 46 994 0.0 1688
Msa0493640 AT2G24520.3 86.359 931 127 0 21 951 1 931 0.0 1665
Msa0493640 AT2G24520.1 86.359 931 127 0 21 951 1 931 0.0 1665
Msa0493640 AT4G30190.1 85.744 947 134 1 5 951 3 948 0.0 1637
Msa0493640 AT2G18960.1 85.412 946 138 0 6 951 4 949 0.0 1634
Msa0493640 AT2G07560.1 83.755 948 151 2 4 951 5 949 0.0 1632
Msa0493640 AT3G42640.1 84.161 947 146 2 5 951 6 948 0.0 1629
Msa0493640 AT5G57350.4 84.567 946 145 1 6 951 5 949 0.0 1623
Msa0493640 AT5G57350.2 84.567 946 145 1 6 951 5 949 0.0 1623
Msa0493640 AT5G57350.1 84.567 946 145 1 6 951 5 949 0.0 1623
Msa0493640 AT4G30190.2 82.857 980 134 2 5 951 3 981 0.0 1620
Msa0493640 AT1G80660.1 82.893 947 162 0 5 951 8 954 0.0 1614
Msa0493640 AT1G80660.4 82.898 918 157 0 5 922 8 925 0.0 1564
Msa0493640 AT1G80660.3 82.898 918 157 0 5 922 8 925 0.0 1563
Msa0493640 AT5G62670.1 80.947 950 176 2 6 951 8 956 0.0 1557
Msa0493640 AT3G47950.1 80.842 950 177 2 6 951 12 960 0.0 1554
Msa0493640 AT3G47950.2 80.842 950 177 2 6 951 12 960 0.0 1554
Msa0493640 AT2G18960.3 86.215 885 122 0 67 951 1 885 0.0 1535
Msa0493640 AT2G18960.2 86.215 885 122 0 67 951 1 885 0.0 1535
Msa0493640 AT1G80660.2 83.152 825 139 0 127 951 1 825 0.0 1454
Msa0493640 AT3G60330.4 72.737 961 243 4 5 951 6 961 0.0 1419
Msa0493640 AT3G60330.3 72.737 961 243 4 5 951 6 961 0.0 1419
Msa0493640 AT3G60330.2 72.529 961 245 4 5 951 6 961 0.0 1415
Msa0493640 AT3G60330.1 72.529 961 245 4 5 951 6 961 0.0 1415
Msa0493640 AT1G17260.1 70.899 945 265 2 7 951 13 947 0.0 1350
Msa0493640 AT2G24520.4 87.791 688 84 0 264 951 1 688 0.0 1269
Msa0493640 AT5G57350.3 83.430 688 113 1 264 951 1 687 0.0 1202
Msa0493640 AT4G11730.1 65.517 464 150 5 3 463 4 460 0.0 613
Msa0493640 AT4G11730.1 68.942 293 86 3 569 857 480 771 1.72e-123 395
Msa0493640 AT4G29900.1 25.348 718 417 20 38 656 159 856 4.95e-47 183
Msa0493640 AT4G29900.2 25.348 718 417 20 38 656 159 856 4.95e-47 183
Msa0493640 AT5G57110.1 25.000 708 428 19 38 656 159 852 7.99e-47 182
Msa0493640 AT5G57110.3 25.000 708 428 19 38 656 159 852 7.99e-47 182
Msa0493640 AT5G57110.2 25.000 708 428 19 38 656 159 852 7.99e-47 182
Msa0493640 AT3G22910.1 25.963 597 363 16 133 656 224 814 2.27e-46 181
Msa0493640 AT3G57330.2 24.100 722 456 22 22 671 64 765 2.59e-44 174
Msa0493640 AT1G27770.4 23.874 733 455 24 12 656 108 825 2.73e-44 174
Msa0493640 AT1G27770.1 23.874 733 455 24 12 656 108 825 2.73e-44 174
Msa0493640 AT2G22950.1 25.000 736 430 24 30 674 129 833 2.77e-44 174
Msa0493640 AT1G27770.3 23.738 733 456 24 12 656 45 762 3.10e-44 174
Msa0493640 AT3G57330.1 24.118 709 447 21 34 671 132 820 3.66e-44 174
Msa0493640 AT4G37640.1 25.588 723 420 24 27 656 125 822 4.03e-44 174
Msa0493640 AT2G41560.2 24.313 728 452 24 21 671 16 721 9.97e-42 166
Msa0493640 AT2G41560.3 24.313 728 452 24 21 671 16 721 9.97e-42 166
Msa0493640 AT2G41560.4 24.313 728 452 24 21 671 16 721 9.97e-42 166
Msa0493640 AT2G41560.1 24.038 728 454 23 21 671 118 823 1.15e-41 166
Msa0493640 AT3G21180.1 23.699 730 450 21 21 656 153 869 8.47e-41 163
Msa0493640 AT3G63380.1 24.534 697 437 21 39 656 132 818 3.77e-35 145
Msa0493640 AT1G10130.1 27.966 472 283 18 424 844 510 975 7.27e-35 144
Msa0493640 AT1G10130.1 30.994 342 203 11 34 345 23 361 4.36e-28 122
Msa0493640 AT1G07810.1 30.053 376 203 13 21 345 31 397 4.98e-31 132
Msa0493640 AT1G07810.1 28.571 378 207 11 406 730 514 881 1.51e-25 114
Msa0493640 AT1G07670.2 29.787 376 204 13 21 345 31 397 5.67e-31 132
Msa0493640 AT1G07670.2 31.935 310 170 9 457 730 577 881 3.82e-26 116
Msa0493640 AT1G07670.1 29.787 376 204 13 21 345 31 397 5.67e-31 132
Msa0493640 AT1G07670.1 31.935 310 170 9 457 730 577 881 3.82e-26 116
Msa0493640 AT4G00900.2 31.122 392 205 15 395 732 499 879 3.61e-30 129
Msa0493640 AT4G00900.2 28.571 371 211 11 21 342 14 379 1.50e-27 120
Msa0493640 AT4G00900.1 31.122 392 205 15 395 732 499 879 3.61e-30 129
Msa0493640 AT4G00900.1 28.571 371 211 11 21 342 14 379 1.50e-27 120
Msa0493640 AT1G63440.1 24.916 594 354 18 101 664 412 943 4.42e-27 119
Msa0493640 AT5G44790.1 23.333 600 355 18 113 667 418 957 2.08e-24 110
Msa0493640 AT1G27770.2 23.891 586 355 21 12 515 108 684 4.52e-23 106
Msa0493640 AT4G30110.1 23.008 665 399 22 60 685 99 689 1.64e-22 104
Msa0493640 AT4G30110.2 23.008 665 399 22 60 685 99 689 1.64e-22 104
Msa0493640 AT5G21930.2 22.980 557 331 18 153 674 354 847 1.56e-21 101
Msa0493640 AT5G21930.1 22.980 557 331 18 153 674 354 847 1.56e-21 101
Msa0493640 AT5G21930.4 23.031 508 300 16 153 628 354 802 2.16e-18 91.3
Msa0493640 AT5G21930.3 22.662 556 311 19 153 674 354 824 3.50e-18 90.5
Msa0493640 AT5G53010.1 21.980 687 455 17 38 656 185 858 5.45e-18 90.1
Msa0493640 AT4G33520.2 21.865 654 417 15 95 710 344 941 3.00e-17 87.8
Msa0493640 AT4G33520.3 22.828 587 372 13 95 656 344 874 3.95e-17 87.4
Msa0493640 AT2G19110.2 21.418 677 388 22 63 685 112 698 5.85e-15 80.5
Msa0493640 AT2G19110.3 21.418 677 388 22 63 685 112 698 5.85e-15 80.5
Msa0493640 AT2G19110.1 21.418 677 388 22 63 685 112 698 5.85e-15 80.5

Find 267 sgRNAs with CRISPR-Local

Find 456 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAGCTTTGCAAGAATTA+AGG 0.202354 3_4:-18964827 Msa0493640:CDS
TGTTGGTATCATTTCTCTTT+TGG 0.205719 3_4:-18969028 Msa0493640:CDS
ACATTGACTCTGACGGAAAT+TGG 0.218673 3_4:-18967072 Msa0493640:CDS
CGAGCGTGGACTCCGTTCTT+TGG 0.218966 3_4:-18966858 Msa0493640:CDS
TGAAGAAGATGCTGCAATTT+TGG 0.219025 3_4:-18968087 Msa0493640:CDS
AAAGGCATGCGACCACAATT+TGG 0.235638 3_4:-18963491 Msa0493640:three_prime_UTR
TTATAGCAGTATATGCTAAT+TGG 0.236742 3_4:-18964846 Msa0493640:CDS
AACATTATCTGGTATATATT+AGG 0.238496 3_4:-18963179 Msa0493640:three_prime_UTR
ATCCTATCAACCATGTTATT+TGG 0.247719 3_4:+18963736 None:intergenic
GGGGTTGGGCTGGTGTAATC+TGG 0.254805 3_4:-18964795 Msa0493640:CDS
ATAATTATATACCCTTGTTT+TGG 0.255665 3_4:+18968927 None:intergenic
TATGGAAGCTGCTGCTATTA+TGG 0.264670 3_4:-18969100 Msa0493640:CDS
GCAGATACATTAACATTATC+TGG 0.282151 3_4:-18963190 Msa0493640:three_prime_UTR
TTCTTGCAGCAAGGGCTTCT+AGG 0.285624 3_4:-18967431 Msa0493640:CDS
GCATATTTATTTACCTCCTT+TGG 0.295641 3_4:+18967357 None:intergenic
TGCTATTATGGCCATTGCTT+TGG 0.300734 3_4:-18969088 Msa0493640:CDS
CAGCGGTTGGTTTGAGTCAT+AGG 0.306940 3_4:+18970637 None:intergenic
GCCAACAATTGCAGCATCTA+TGG 0.309947 3_4:+18967392 None:intergenic
TATCTCACCATCATTTAGTA+TGG 0.316399 3_4:+18965661 None:intergenic
CAAAGCTTGGGATAATCTTC+TGG 0.316415 3_4:-18964704 Msa0493640:CDS
TGGAGCTTTGCAAGAATTAA+GGG 0.318513 3_4:-18964826 Msa0493640:CDS
GATATCATCAGCATTAAATT+AGG 0.323247 3_4:-18968056 Msa0493640:CDS
AGACGGAATTGACAATCTTT+TGG 0.337942 3_4:-18967697 Msa0493640:CDS
AAGACCTGGTCTTCTCCTAT+TGG 0.340057 3_4:-18965179 Msa0493640:CDS
TTGTCTGTTACCATGGCTAT+TGG 0.341742 3_4:-18967633 Msa0493640:CDS
CGTAACCCTGTTCTTCTTGA+AGG 0.343646 3_4:+18963913 None:intergenic
CTATTAAGACTCTGTGTGTT+TGG 0.344787 3_4:-18970499 Msa0493640:five_prime_UTR
GAACCCTTTATCATGGGTTA+TGG 0.350255 3_4:-18969118 Msa0493640:CDS
ATGGCCATTGCTTTGGCTAA+TGG 0.350781 3_4:-18969081 Msa0493640:CDS
ATCCTTGGATATTGTCATAA+TGG 0.352453 3_4:+18965554 None:intergenic
TCTGAGGGATTCTTTGTTGC+CGG 0.354428 3_4:+18967951 None:intergenic
AGAAATTACCAATTGCTGTT+AGG 0.354571 3_4:+18967793 None:intergenic
TTTCCTTCTTTGTTGCAGTA+AGG 0.354691 3_4:+18963371 None:intergenic
CTATTATTGCAGGACAAGTT+TGG 0.356032 3_4:-18965319 Msa0493640:intron
TTCTTTGGGTGTTGCTAGAC+AGG 0.356432 3_4:-18966843 Msa0493640:intron
GAGCGTGGACTCCGTTCTTT+GGG 0.361280 3_4:-18966857 Msa0493640:CDS
TAAGGGAATGGGATGGGGTT+GGG 0.365555 3_4:-18964809 Msa0493640:CDS
GGCTTCTAGGACTGAGAATC+AGG 0.365755 3_4:-18967418 Msa0493640:CDS
CTTGCCATTGCCAAGGAAAC+TGG 0.367359 3_4:-18966485 Msa0493640:CDS
CGAATCAGTCGTGAAGCTTA+AGG 0.367521 3_4:-18963990 Msa0493640:CDS
CTGAAAGTGACCAACTTGAT+TGG 0.369358 3_4:+18967821 None:intergenic
GCTTCCATAACCCATGATAA+AGG 0.369885 3_4:+18969114 None:intergenic
CCAACAAAATCCTGCCAATC+AGG 0.370205 3_4:+18969045 None:intergenic
GCCAACAGGCTTCAAGTGTT+TGG 0.371772 3_4:-18969201 Msa0493640:CDS
GACTTATAATACTGACTTGT+AGG 0.372124 3_4:+18965248 None:intergenic
GGAATGGGATGGGGTTGGGC+TGG 0.376471 3_4:-18964805 Msa0493640:CDS
CAGTATAGTTCTTCATCCTT+TGG 0.376619 3_4:+18966001 None:intergenic
CACAGGCACGAGCTGGTGTC+AGG 0.380163 3_4:-18967147 Msa0493640:intron
TGCATTTGCTCAATTGCTGT+TGG 0.380271 3_4:-18967771 Msa0493640:CDS
AGTGTTTGGTCCAAACAAAT+TGG 0.380860 3_4:-18969187 Msa0493640:CDS
CAGAAAGTCCTAACAGCAAT+TGG 0.384030 3_4:-18967801 Msa0493640:CDS
GCTGCTGCTGCTCTCATGGC+TGG 0.384035 3_4:-18968958 Msa0493640:CDS
TTCTCAATCAACTCATCAAC+TGG 0.387666 3_4:+18966380 None:intergenic
TCATGTTCATTGCCTTGATC+TGG 0.387843 3_4:-18965721 Msa0493640:CDS
AGTTTCCAACTGTCTGGTTG+TGG 0.392732 3_4:+18965516 None:intergenic
AAGGCATGCGACCACAATTT+GGG 0.393874 3_4:-18963490 Msa0493640:three_prime_UTR
AGGGCTGCCATCATTTCATC+AGG 0.394338 3_4:+18965274 None:intergenic
CAACTGTCTGGTTGTGGAGA+TGG 0.394486 3_4:+18965522 None:intergenic
AGAGGAGATACTATTCTCTT+AGG 0.395076 3_4:-18963761 Msa0493640:three_prime_UTR
GGACAACCTTCAAGAAGAAC+AGG 0.399173 3_4:-18963919 Msa0493640:three_prime_UTR
GGGCTATCTTTATCTTTCTC+AGG 0.399203 3_4:+18966717 None:intergenic
AAAACAGTTGGCATAGCAAT+TGG 0.400400 3_4:+18967654 None:intergenic
TTCCTTCTTTGTTGCAGTAA+GGG 0.401327 3_4:+18963372 None:intergenic
ATTATACTGTTTAAGAAGCT+TGG 0.403584 3_4:-18963940 Msa0493640:exon
CTTATTTAAAGTCAGAGTTC+CGG 0.405876 3_4:+18967518 None:intergenic
CTCTTGTCTACAGGATTGAA+TGG 0.408748 3_4:+18967109 None:intergenic
TCTCTCAGTTTCCAACTGTC+TGG 0.408905 3_4:+18965510 None:intergenic
TTCACAACAAAGAAAGACTA+TGG 0.408967 3_4:-18964313 Msa0493640:CDS
CAAACAAATTGGAAGAGAAA+AGG 0.409390 3_4:-18969176 Msa0493640:CDS
GTTGATCAGTCTGCTTTAAC+CGG 0.412458 3_4:-18967984 Msa0493640:CDS
TAATGCTGCTGCTGCTCTCA+TGG 0.415083 3_4:-18968962 Msa0493640:CDS
AACAAATAGTTTACCTGCTC+AGG 0.416210 3_4:+18967028 None:intergenic
TTGTTCCCATTCCAAGCCTT+CGG 0.418174 3_4:+18966462 None:intergenic
AGACCTGGTCTTCTCCTATT+GGG 0.419290 3_4:-18965178 Msa0493640:CDS
GCTGATGCTCGTCTGCTTGA+GGG 0.419597 3_4:-18968020 Msa0493640:CDS
AATGACAGCTATTGAGGAAA+TGG 0.420930 3_4:-18967571 Msa0493640:CDS
GAGAAGGCTGATGGATTTGC+TGG 0.421728 3_4:-18966362 Msa0493640:CDS
AAAGCAGTTCTCTTGTCTAC+AGG 0.423643 3_4:+18967100 None:intergenic
AAGGAAACTGGCCGAAGGCT+TGG 0.428150 3_4:-18966473 Msa0493640:CDS
AAGCCTTCGGCCAGTTTCCT+TGG 0.428791 3_4:+18966475 None:intergenic
GTGAATGTTAAGATGATTAC+TGG 0.436771 3_4:-18966600 Msa0493640:intron
GAAGCAGTTGTCATTGCTAC+TGG 0.437520 3_4:-18967888 Msa0493640:CDS
TTGTCACCAGGTCCCGTAGC+TGG 0.443803 3_4:-18965213 Msa0493640:CDS
GAATCAGTCGTGAAGCTTAA+GGG 0.446216 3_4:-18963989 Msa0493640:CDS
TAAATTTGTTCACAGGCTTA+GGG 0.449466 3_4:-18964038 Msa0493640:intron
TGCAACTTCAGCACGTCTCT+TGG 0.453611 3_4:+18964162 None:intergenic
AAGAATTAAGGGAATGGGAT+GGG 0.454877 3_4:-18964815 Msa0493640:CDS
ACTGCTCAGAGGACTCTTCA+TGG 0.455575 3_4:-18964262 Msa0493640:CDS
TGAAGTTCTTAGGATTTATG+TGG 0.456304 3_4:-18969140 Msa0493640:CDS
GAAGGATACCGATTTCTTCT+CGG 0.456878 3_4:-18965418 Msa0493640:intron
TTGAAAAGGTTGGTTGTGTC+AGG 0.456888 3_4:+18964229 None:intergenic
GTCAATTACCATTCGTATTG+TGG 0.456935 3_4:-18965883 Msa0493640:intron
CGGTAACCGGACAGGTTGGC+TGG 0.459017 3_4:+18963089 None:intergenic
AGAATTAAGGGAATGGGATG+GGG 0.459676 3_4:-18964814 Msa0493640:CDS
TTATGTGGAACCCTTTATCA+TGG 0.461954 3_4:-18969125 Msa0493640:CDS
CAATCATAAAAGCACCCAAT+AGG 0.462642 3_4:+18965164 None:intergenic
TATCCATCTTCTTCATTGCT+CGG 0.463155 3_4:-18966434 Msa0493640:CDS
GCGTTAAAGAGAGCAGATAT+TGG 0.463815 3_4:-18966135 Msa0493640:CDS
GCAACTGCAAAGAGGATGTC+AGG 0.465143 3_4:-18966913 Msa0493640:CDS
AAACAAATTGGAAGAGAAAA+GGG 0.465202 3_4:-18969175 Msa0493640:CDS
GATATTGTCCTTACTGAGCC+TGG 0.466202 3_4:-18966069 Msa0493640:CDS
TCTGGTTCAACTGTTAAGAA+AGG 0.466925 3_4:-18967918 Msa0493640:CDS
CTATACTTGCGGTGTTGTAT+CGG 0.467501 3_4:+18967720 None:intergenic
AGCTATTCTTGTCATTGAAA+AGG 0.467817 3_4:+18964215 None:intergenic
CTTCCATAACCCATGATAAA+GGG 0.468799 3_4:+18969115 None:intergenic
ACAAATTGCCATGGTGCACC+AGG 0.469750 3_4:+18966696 None:intergenic
AGGGAGCTTCACACTCTAAA+GGG 0.473612 3_4:-18964019 Msa0493640:CDS
AAAGAGAATGACAGCTATTG+AGG 0.476115 3_4:-18967577 Msa0493640:CDS
TACCAAATAACATGGTTGAT+AGG 0.477229 3_4:-18963738 Msa0493640:three_prime_UTR
TTAAGGGAATGGGATGGGGT+TGG 0.477879 3_4:-18964810 Msa0493640:CDS
CATCCTCTTTGCAGTTGCAG+AGG 0.478214 3_4:+18966918 None:intergenic
AATTATTACCGAGAAGAAAT+CGG 0.479237 3_4:+18965410 None:intergenic
TTTGCTACTGGTGTTGTGCT+AGG 0.479390 3_4:-18965483 Msa0493640:CDS
GGTGCACCATGGCAATTTGT+TGG 0.479985 3_4:-18966693 Msa0493640:CDS
TTACGAATTTGAGTATATCA+AGG 0.480257 3_4:+18964746 None:intergenic
AGATGGTTTCACTCTATCCT+TGG 0.480543 3_4:+18965539 None:intergenic
TCAATGACAAGAATAGCTAC+AGG 0.482223 3_4:-18964210 Msa0493640:CDS
TTCATTGAAGAGAATAATGC+TGG 0.482524 3_4:-18968985 Msa0493640:CDS
TGCTCGAACACTTCCTCTAC+TGG 0.482543 3_4:+18969264 None:intergenic
TTTAACCGGAGAATCTCTTC+CGG 0.485484 3_4:-18967970 Msa0493640:CDS
ATTCTTGTCATTGAAAAGGT+TGG 0.486676 3_4:+18964219 None:intergenic
GTCCTCTGCAGTGACAAAAC+CGG 0.488160 3_4:-18967537 Msa0493640:CDS
GCCATAGATGCTGCAATTGT+TGG 0.488334 3_4:-18967393 Msa0493640:CDS
TAGGGAGCTTCACACTCTAA+AGG 0.489909 3_4:-18964020 Msa0493640:CDS
ATTGCTTTGGCTAATGGCGG+TGG 0.494736 3_4:-18969075 Msa0493640:CDS
TGCTGATGCTCGTCTGCTTG+AGG 0.496020 3_4:-18968021 Msa0493640:CDS
ACAAGTCAGTATTATAAGTC+AGG 0.496065 3_4:-18965245 Msa0493640:CDS
TGTTATCCTTCTTGCAGCAA+GGG 0.497356 3_4:-18967439 Msa0493640:CDS
TCATGGAACAATATAAATGC+AGG 0.498216 3_4:+18970558 None:intergenic
TTTGCAAGAATTAAGGGAAT+GGG 0.499506 3_4:-18964820 Msa0493640:CDS
ATGTTCTAAGTGGCAAAGCT+TGG 0.500130 3_4:-18964717 Msa0493640:CDS
AAACATATATGTGGAATGAC+AGG 0.500678 3_4:-18966180 Msa0493640:CDS
TGGAAGACCTCCTGATTGGC+AGG 0.503131 3_4:-18969055 Msa0493640:CDS
AACTGGCCGAAGGCTTGGAA+TGG 0.503926 3_4:-18966468 Msa0493640:CDS
CAGCTGAAATGTTCAAGAGC+AGG 0.504044 3_4:-18969243 Msa0493640:CDS
TAGCAAAGGTGCTCCTGAGC+AGG 0.507970 3_4:-18967041 Msa0493640:intron
TCTTGTCTACAGGATTGAAT+GGG 0.508672 3_4:+18967110 None:intergenic
ATTGTATTCATAGGTAGAAA+CGG 0.510261 3_4:+18963069 None:intergenic
TGTTCTAAGTGGCAAAGCTT+GGG 0.510732 3_4:-18964716 Msa0493640:CDS
CATCAGACGAAGGAGCCAAC+AGG 0.511617 3_4:-18969215 Msa0493640:CDS
TCGGCCAGTTTCCTTGGCAA+TGG 0.513300 3_4:+18966481 None:intergenic
AAAATCAAACTTCCAGATCA+AGG 0.513418 3_4:+18965709 None:intergenic
ATATCTGCTCTCTTTAACGC+AGG 0.513794 3_4:+18966138 None:intergenic
TCATAGGTAGAAACGGTAAC+CGG 0.515272 3_4:+18963076 None:intergenic
GCTAGACATGAAGTCAGAAA+AGG 0.517281 3_4:+18963571 None:intergenic
CACTCAGACCAGGCTCAGTA+AGG 0.519638 3_4:+18966061 None:intergenic
TCAAAACCAGCCAACCTGTC+CGG 0.520672 3_4:-18963095 Msa0493640:three_prime_UTR
AACCCTTACTGCAACAAAGA+AGG 0.522582 3_4:-18963374 Msa0493640:three_prime_UTR
GCGATAATCAACACCATGAA+GGG 0.525263 3_4:+18965683 None:intergenic
CTCTTAGGTACCAAATAACA+TGG 0.525764 3_4:-18963746 Msa0493640:three_prime_UTR
TTAACTTACATTGACTCTGA+CGG 0.526827 3_4:-18967079 Msa0493640:CDS
TGGTCCTTTGTTGAAAGACC+TGG 0.527044 3_4:-18965193 Msa0493640:CDS
TGCACTTACCACAATACGAA+TGG 0.527828 3_4:+18965875 None:intergenic
GCGGTGGAAGACCTCCTGAT+TGG 0.529609 3_4:-18969059 Msa0493640:CDS
TTCATTGCTCGGTCAAAGCA+AGG 0.529827 3_4:-18966423 Msa0493640:CDS
TGACCGAGCAATGAAGAAGA+TGG 0.531357 3_4:+18966431 None:intergenic
TGTTGCCGGAAGAGATTCTC+CGG 0.532571 3_4:+18967965 None:intergenic
TTTCAACAAAGGACCAGCTA+CGG 0.533044 3_4:+18965200 None:intergenic
CTGAGAGAGATATTTGCTAC+TGG 0.533620 3_4:-18965495 Msa0493640:CDS
ACAGCTATTGAGGAAATGGC+AGG 0.534436 3_4:-18967567 Msa0493640:CDS
ACTGGCCGAAGGCTTGGAAT+GGG 0.534538 3_4:-18966467 Msa0493640:CDS
CAATTCCGTCTCTATACTTG+CGG 0.537350 3_4:+18967709 None:intergenic
AGCGGTTGGTTTGAGTCATA+GGG 0.537863 3_4:+18970638 None:intergenic
TAATACTGACTTGTAGGTAG+AGG 0.538323 3_4:+18965254 None:intergenic
CTTTGCAAGAATTAAGGGAA+TGG 0.538856 3_4:-18964821 Msa0493640:CDS
TACGAATTTGAGTATATCAA+GGG 0.539623 3_4:+18964747 None:intergenic
TCAAGCAGACGAGCATCAGC+AGG 0.540988 3_4:+18968023 None:intergenic
AGAAGAGAGAGAAGCTCAGT+GGG 0.544555 3_4:-18964287 Msa0493640:CDS
ATGTTATCCTTCTTGCAGCA+AGG 0.545283 3_4:-18967440 Msa0493640:CDS
GGCGATAATCAACACCATGA+AGG 0.547314 3_4:+18965682 None:intergenic
TATGTGGAACCCTTTATCAT+GGG 0.547893 3_4:-18969124 Msa0493640:CDS
ACCAAACACTTGAAGCCTGT+TGG 0.547895 3_4:+18969200 None:intergenic
TACCTCTATTTGATCCTCCT+AGG 0.549204 3_4:-18966665 Msa0493640:CDS
TTCAACAAAGGACCAGCTAC+GGG 0.551987 3_4:+18965201 None:intergenic
ATTATCGCCATACTAAATGA+TGG 0.552243 3_4:-18965668 Msa0493640:intron
TCCTCTAGCTAGTGGCATTG+AGG 0.553716 3_4:+18963778 None:intergenic
AAAGGACCAGCTACGGGACC+TGG 0.558086 3_4:+18965207 None:intergenic
TACTGAGTGATGCAGAGTCA+TGG 0.558563 3_4:+18970541 None:intergenic
TTAATGTATCTGCTCAACAT+AGG 0.559131 3_4:+18963200 None:intergenic
ATCACAAGAGCTCTGAACCT+TGG 0.559361 3_4:-18966624 Msa0493640:CDS
TGAATTACACAGGCACGAGC+TGG 0.559826 3_4:-18967154 Msa0493640:intron
TGCCTAGGAGGATCAAATAG+AGG 0.560994 3_4:+18966663 None:intergenic
AAGAAGAGAGAGAAGCTCAG+TGG 0.561548 3_4:-18964288 Msa0493640:CDS
AACTCATGTGTTGCGAGGTG+CGG 0.561587 3_4:+18963467 None:intergenic
GAGTTGATTGAGAAGGCTGA+TGG 0.562854 3_4:-18966371 Msa0493640:CDS
CATCTCCACAACCAGACAGT+TGG 0.564636 3_4:-18965521 Msa0493640:CDS
TAGAAGCCCTTGCTGCAAGA+AGG 0.568196 3_4:+18967433 None:intergenic
AACATGTAGGTTCTAAGAGA+TGG 0.568330 3_4:-18968119 Msa0493640:intron
GTTGACAGCACCAATCAAGT+TGG 0.569975 3_4:-18967831 Msa0493640:CDS
GGTAGAAACGGTAACCGGAC+AGG 0.570044 3_4:+18963081 None:intergenic
AGAAAGGGTGATGCAGCGGT+TGG 0.570636 3_4:+18970624 None:intergenic
ACGAATTTGAGTATATCAAG+GGG 0.572707 3_4:+18964748 None:intergenic
ATTGACAAGTTCGCCGAGCG+TGG 0.575480 3_4:-18966872 Msa0493640:CDS
CAAGAGAGGAAACATATATG+TGG 0.577053 3_4:-18966189 Msa0493640:CDS
CTAATAATGACACTCAGACC+AGG 0.578038 3_4:+18966051 None:intergenic
CAAAGAACGGAGTCCACGCT+CGG 0.579535 3_4:+18966859 None:intergenic
TCGTAAAGAAACTGCAAGAG+AGG 0.582235 3_4:-18966203 Msa0493640:CDS
TTGAACGACATTAGTAGTCA+AGG 0.583033 3_4:+18963621 None:intergenic
GTAATCCGCTATGTTCTAAG+TGG 0.583653 3_4:-18964727 Msa0493640:CDS
TACCATTATGACAATATCCA+AGG 0.583733 3_4:-18965556 Msa0493640:CDS
GGATAATCTTCTGGAGAACA+AGG 0.585187 3_4:-18964695 Msa0493640:intron
ATGGTAACAGACAAAACAGT+TGG 0.587258 3_4:+18967642 None:intergenic
TATTGAGGAAATGGCAGGGA+TGG 0.587411 3_4:-18967562 Msa0493640:CDS
GCGAGGTGCGGCCCAAATTG+TGG 0.587526 3_4:+18963479 None:intergenic
ACCAGAAAACACTTCATCTG+AGG 0.591597 3_4:+18967935 None:intergenic
AAGGTTCAGAGCTCTTGTGA+TGG 0.591709 3_4:+18966626 None:intergenic
AATACTGACTTGTAGGTAGA+GGG 0.591903 3_4:+18965255 None:intergenic
ATAGTATCTCCTCTAGCTAG+TGG 0.593212 3_4:+18963770 None:intergenic
CCAGAAAACACTTCATCTGA+GGG 0.594004 3_4:+18967936 None:intergenic
CAAGAATTAAGGGAATGGGA+TGG 0.596218 3_4:-18964816 Msa0493640:CDS
GTCTAGCAACACCCAAAGAA+CGG 0.599274 3_4:+18966846 None:intergenic
AATTTGAACACTGTCCAACA+TGG 0.599317 3_4:-18970475 Msa0493640:exon
AAGGCTGATACCTCCCATGT+TGG 0.606372 3_4:+18970461 None:intergenic
GTTTCAGCACTATCATGCCT+AGG 0.606943 3_4:+18966648 None:intergenic
TTAATGCTGATGATATCACC+TGG 0.609022 3_4:+18968062 None:intergenic
CAATGACAAGAATAGCTACA+GGG 0.610067 3_4:-18964209 Msa0493640:CDS
TGGCATGCTTGCTGATCCAA+AGG 0.612764 3_4:-18967373 Msa0493640:CDS
GAGAAAGATAAAGATAGCCC+TGG 0.613292 3_4:-18966714 Msa0493640:CDS
GTTTAGTCGTAACCAATGAG+AGG 0.614173 3_4:-18963233 Msa0493640:three_prime_UTR
GCCATTGCTTTGGCTAATGG+CGG 0.614878 3_4:-18969078 Msa0493640:CDS
GCACCCAATAGGAGAAGACC+AGG 0.615453 3_4:+18965175 None:intergenic
TCCTCAATGCCACTAGCTAG+AGG 0.617823 3_4:-18963779 Msa0493640:three_prime_UTR
GGGCTGCCATCATTTCATCA+GGG 0.619360 3_4:+18965275 None:intergenic
GATGCTACAGATGCCGCTAG+AGG 0.620087 3_4:-18966099 Msa0493640:CDS
GAACCTCTGCAACTGCAAAG+AGG 0.621118 3_4:-18966921 Msa0493640:CDS
CTCAGTGGGCAACTGCTCAG+AGG 0.621585 3_4:-18964273 Msa0493640:CDS
ACAGGCACGAGCTGGTGTCA+GGG 0.622880 3_4:-18967146 Msa0493640:intron
TCTGTGAGAACCAATAGCCA+TGG 0.624951 3_4:+18967623 None:intergenic
CATGGAACAATATAAATGCA+GGG 0.625295 3_4:+18970559 None:intergenic
TGTAGGTTCTAAGAGATGGT+AGG 0.625860 3_4:-18968115 Msa0493640:intron
TGATCAGCTTGCCATTGCCA+AGG 0.627353 3_4:-18966492 Msa0493640:CDS
AGTTGATGAGTTGATTGAGA+AGG 0.629685 3_4:-18966378 Msa0493640:CDS
ACCGCCATTAGCCAAAGCAA+TGG 0.633653 3_4:+18969077 None:intergenic
AGAGACGTGCTGAAGTTGCA+CGG 0.635563 3_4:-18964159 Msa0493640:intron
TCAGGAACGAATTCCAGTAG+AGG 0.639267 3_4:-18969277 Msa0493640:intron
AATATCAGAAGCACCTCTAG+CGG 0.640398 3_4:+18966086 None:intergenic
AACAGACCAACAAATTGCCA+TGG 0.640731 3_4:+18966687 None:intergenic
GAAACGGTAACCGGACAGGT+TGG 0.640892 3_4:+18963085 None:intergenic
CAACACCGCAAGTATAGAGA+CGG 0.642140 3_4:-18967714 Msa0493640:CDS
TTGCCAAGGAAACTGGCCGA+AGG 0.646825 3_4:-18966478 Msa0493640:CDS
TCAGCACTATCATGCCTAGG+AGG 0.649052 3_4:+18966651 None:intergenic
ACAAAATCCTGCCAATCAGG+AGG 0.654781 3_4:+18969048 None:intergenic
CAGCTATTGAGGAAATGGCA+GGG 0.657394 3_4:-18967566 Msa0493640:CDS
ATATGTGGAATGACAGGTGA+TGG 0.659594 3_4:-18966174 Msa0493640:CDS
AAGACCAGGTCTTTCAACAA+AGG 0.660144 3_4:+18965189 None:intergenic
CATGGGAGGTATCAGCCTTG+AGG 0.660328 3_4:-18970457 Msa0493640:CDS
ATTTGAACACTGTCCAACAT+GGG 0.660570 3_4:-18970474 Msa0493640:exon
AAGATAGCCCTGGTGCACCA+TGG 0.661281 3_4:-18966704 Msa0493640:CDS
TCTCACAGACTTTCTCAACA+AGG 0.668351 3_4:-18967609 Msa0493640:CDS
CAAATTGCCATGGTGCACCA+GGG 0.668629 3_4:+18966697 None:intergenic
TGTTGTGCTAGGTAGCTACA+TGG 0.674726 3_4:-18965472 Msa0493640:CDS
GGCACGAGCTGGTGTCAGGG+AGG 0.679297 3_4:-18967143 Msa0493640:CDS
AGGTTCTAAGAGATGGTAGG+TGG 0.680535 3_4:-18968112 Msa0493640:CDS
TGAACACTGTCCAACATGGG+AGG 0.680717 3_4:-18970471 Msa0493640:exon
GGCTGCAGCTGTTATCGCGG+TGG 0.681132 3_4:-18963405 Msa0493640:three_prime_UTR
CAATATCAAGGATTGTGATG+TGG 0.681168 3_4:-18963426 Msa0493640:three_prime_UTR
CTTTGCCACTTAGAACATAG+CGG 0.682408 3_4:+18964722 None:intergenic
GACAACCTTCAAGAAGAACA+GGG 0.683350 3_4:-18963918 Msa0493640:three_prime_UTR
TAATGCTGATGATATCACCT+GGG 0.685163 3_4:+18968063 None:intergenic
TCATCTTAACATTCACACCA+AGG 0.685618 3_4:+18966607 None:intergenic
CATGCTTGCTGATCCAAAGG+AGG 0.686175 3_4:-18967370 Msa0493640:intron
AATTGGCATAGATCTAGCAA+AGG 0.686470 3_4:-18967055 Msa0493640:CDS
GCAGGTTTAACATCAGACGA+AGG 0.690232 3_4:-18969225 Msa0493640:CDS
GTGAAGAAAGGGTGATGCAG+CGG 0.701551 3_4:+18970620 None:intergenic
TGTGGCTGCAGCTGTTATCG+CGG 0.705933 3_4:-18963408 Msa0493640:three_prime_UTR
CTACATGGCACTAATGACAG+TGG 0.707394 3_4:-18965457 Msa0493640:CDS
CGAATTTGAGTATATCAAGG+GGG 0.718068 3_4:+18964749 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTTAATGTAAAATTT+AGG + chr3_4:18963553-18963572 None:intergenic 10.0%
!! TTGTAAAAAAAATGTTTATA+TGG + chr3_4:18963874-18963893 None:intergenic 10.0%
!!! TATAATATTATATTTTAGCT+AGG + chr3_4:18964066-18964085 None:intergenic 10.0%
!!! AGAAATTATTTGAAATAAAA+TGG + chr3_4:18964384-18964403 None:intergenic 10.0%
!!! ATATTTTTCAATTTAATTGA+CGG + chr3_4:18964939-18964958 None:intergenic 10.0%
!! ATATTATCAATATTTCAAAA+CGG + chr3_4:18965477-18965496 None:intergenic 10.0%
!!! TTTTGAAATATTGATAATAT+GGG - chr3_4:18965477-18965496 Msa0493640:CDS 10.0%
!!! AATTTTTTTAATACCCAAAA+AGG - chr3_4:18963521-18963540 Msa0493640:three_prime_UTR 15.0%
!!! AGCTCTAATATAATATAATT+TGG + chr3_4:18964015-18964034 None:intergenic 15.0%
!! AAAATACTTATAACAAGATT+TGG + chr3_4:18964353-18964372 None:intergenic 15.0%
!!! ATGTTACAAAAGAAATATTT+TGG - chr3_4:18965088-18965107 Msa0493640:intron 15.0%
!! ATTAAAATCTAACAATTTCA+AGG + chr3_4:18965307-18965326 None:intergenic 15.0%
!!! GTTTTGAAATATTGATAATA+TGG - chr3_4:18965476-18965495 Msa0493640:CDS 15.0%
!!! CTAAATTGATATTTTTTTTC+TGG - chr3_4:18966791-18966810 Msa0493640:intron 15.0%
!!! AAAAGTTAACTTATTTTTGA+AGG - chr3_4:18967915-18967934 Msa0493640:CDS 15.0%
!! AATAGTATAAATTAGAATCT+AGG - chr3_4:18968802-18968821 Msa0493640:intron 15.0%
!!! ATAATTTTTTCATGATTTAC+AGG - chr3_4:18968868-18968887 Msa0493640:intron 15.0%
!! AGAAAGATGTAATATAATTA+GGG + chr3_4:18969181-18969200 None:intergenic 15.0%
!! AAAAAAATGAAGTGAAGAAA+GGG + chr3_4:18963140-18963159 None:intergenic 20.0%
!! AAAAAAAATGAAGTGAAGAA+AGG + chr3_4:18963141-18963160 None:intergenic 20.0%
!! AATAGCAAAATATAGAAACA+GGG + chr3_4:18963768-18963787 None:intergenic 20.0%
!! AAATAGCAAAATATAGAAAC+AGG + chr3_4:18963769-18963788 None:intergenic 20.0%
!! ACATAACAATTCATTAAACA+AGG - chr3_4:18963910-18963929 Msa0493640:three_prime_UTR 20.0%
!!! TTTGAAATAAAATGGACAAA+GGG + chr3_4:18964376-18964395 None:intergenic 20.0%
!!! ATTTGAAATAAAATGGACAA+AGG + chr3_4:18964377-18964396 None:intergenic 20.0%
!!! TAATTATATACCCTTGTTTT+GGG + chr3_4:18964821-18964840 None:intergenic 20.0%
!!! ATAATTATATACCCTTGTTT+TGG + chr3_4:18964822-18964841 None:intergenic 20.0%
!! AGTCATTGAAATTATAAGAT+TGG - chr3_4:18964878-18964897 Msa0493640:intron 20.0%
!!! ATTTAATTTCAGATATATCC+TGG + chr3_4:18964909-18964928 None:intergenic 20.0%
!!! GTATGTTTTATTCATTTTGA+TGG - chr3_4:18965065-18965084 Msa0493640:intron 20.0%
!! TAATCAAATTTAGTATTTGC+AGG - chr3_4:18965323-18965342 Msa0493640:intron 20.0%
!! AATCAAATTTAGTATTTGCA+GGG - chr3_4:18965324-18965343 Msa0493640:intron 20.0%
!!! AATTAAAATTTTGCAATCCT+AGG - chr3_4:18965449-18965468 Msa0493640:CDS 20.0%
!!! ATTAAAATTTTGCAATCCTA+GGG - chr3_4:18965450-18965469 Msa0493640:CDS 20.0%
!! TAATGACTAAATATTCAAGT+TGG + chr3_4:18965537-18965556 None:intergenic 20.0%
!! TGAACATAATCATAATCATA+CGG + chr3_4:18966762-18966781 None:intergenic 20.0%
!! ATGAACCATTTATATAAGTA+TGG + chr3_4:18967964-18967983 None:intergenic 20.0%
!!! ATTTGAAGTAAACAATATGA+AGG + chr3_4:18968123-18968142 None:intergenic 20.0%
!!! TCTTAATTTTTTTTGCTACT+AGG + chr3_4:18968391-18968410 None:intergenic 20.0%
!!! ATTTATACTATTTCTTCCTA+AGG + chr3_4:18968794-18968813 None:intergenic 20.0%
!! GAGAAAGATGTAATATAATT+AGG + chr3_4:18969182-18969201 None:intergenic 20.0%
!! TTCATCATAGTATTTATTAC+AGG + chr3_4:18969210-18969229 None:intergenic 20.0%
!!! GATTTTTTAAATTTGTTCAC+AGG - chr3_4:18969701-18969720 Msa0493640:intron 20.0%
!!! TAATCATGTGTTTTTAGATT+AGG - chr3_4:18969909-18969928 Msa0493640:intron 20.0%
!!! TTTTCAAAATCACAATATCA+AGG - chr3_4:18970308-18970327 Msa0493640:intron 20.0%
!! AACATTATCTGGTATATATT+AGG - chr3_4:18970567-18970586 Msa0493640:five_prime_UTR 20.0%
! AGTAGTAACAGTAACTTAAA+AGG + chr3_4:18963677-18963696 None:intergenic 25.0%
!!! AATTTTTCATTGAAAGCACT+GGG + chr3_4:18963968-18963987 None:intergenic 25.0%
!!! TAATTTTTCATTGAAAGCAC+TGG + chr3_4:18963969-18963988 None:intergenic 25.0%
! ATAATTTGGACCAAACTAAT+AGG + chr3_4:18964001-18964020 None:intergenic 25.0%
! AAGTTTCTCGTAACAAAAAA+TGG + chr3_4:18964195-18964214 None:intergenic 25.0%
! AAACAAATTGGAAGAGAAAA+GGG - chr3_4:18964571-18964590 Msa0493640:intron 25.0%
!!! AGCAAATTTTTGAAGTTCTT+AGG - chr3_4:18964596-18964615 Msa0493640:intron 25.0%
!!! AATTATATACCCTTGTTTTG+GGG + chr3_4:18964820-18964839 None:intergenic 25.0%
!! ATTATAAGATTGGTTAATCC+AGG - chr3_4:18964888-18964907 Msa0493640:intron 25.0%
!!! TTTTGTTTGCAATCATTGTT+TGG - chr3_4:18965200-18965219 Msa0493640:CDS 25.0%
!! AACAATTTCAAGGATCATTT+TGG + chr3_4:18965297-18965316 None:intergenic 25.0%
! TGATAATAGATTTAGACAGA+AGG - chr3_4:18965418-18965437 Msa0493640:intron 25.0%
!! TTAAAATTTTGCAATCCTAG+GGG - chr3_4:18965451-18965470 Msa0493640:CDS 25.0%
! GATATCATCAGCATTAAATT+AGG - chr3_4:18965690-18965709 Msa0493640:CDS 25.0%
!!! AATCTTTTGGTTCTATTGAT+TGG - chr3_4:18966062-18966081 Msa0493640:CDS 25.0%
!! TGTTGATAAAAACTTGATTG+AGG - chr3_4:18966256-18966275 Msa0493640:intron 25.0%
!! TCTTTCTGATACTGAATTTT+AGG - chr3_4:18966532-18966551 Msa0493640:intron 25.0%
!! AGTTTTACTTTGAATTACAC+AGG - chr3_4:18966582-18966601 Msa0493640:intron 25.0%
!!! TTGAATGGTTTGTTTATAAC+AGG - chr3_4:18967001-18967020 Msa0493640:intron 25.0%
!!! TTTTTTCTCTTTCTATGACA+TGG - chr3_4:18967502-18967521 Msa0493640:CDS 25.0%
! GCAATTAAATCAAGTAAGTT+TGG + chr3_4:18967778-18967797 None:intergenic 25.0%
! CTTGTCCATACTTATATAAA+TGG - chr3_4:18967956-18967975 Msa0493640:CDS 25.0%
!!! TATTCTTCATTTTTCCAGTT+TGG - chr3_4:18968000-18968019 Msa0493640:CDS 25.0%
! AATTATTACCGAGAAGAAAT+CGG + chr3_4:18968339-18968358 None:intergenic 25.0%
!!! ATTTTTTCATGATTTACAGG+TGG - chr3_4:18968871-18968890 Msa0493640:intron 25.0%
! TTATAGCAGTATATGCTAAT+TGG - chr3_4:18968900-18968919 Msa0493640:intron 25.0%
! TACGAATTTGAGTATATCAA+GGG + chr3_4:18969002-18969021 None:intergenic 25.0%
! TTACGAATTTGAGTATATCA+AGG + chr3_4:18969003-18969022 None:intergenic 25.0%
! TGCAGTTGAAAATTTGAAAA+AGG + chr3_4:18969133-18969152 None:intergenic 25.0%
! GTTGACTAAATTAAGAAAGT+TGG + chr3_4:18969308-18969327 None:intergenic 25.0%
!! ATTTTGAATCTTGAAATCTC+TGG + chr3_4:18969383-18969402 None:intergenic 25.0%
! TAAAAAATCTCTTAGACACT+AGG + chr3_4:18969690-18969709 None:intergenic 25.0%
! ATTATACTGTTTAAGAAGCT+TGG - chr3_4:18969806-18969825 Msa0493640:intron 25.0%
!!! TGTTTTTAGATTAGGTTGAA+GGG - chr3_4:18969917-18969936 Msa0493640:intron 25.0%
!! TCCTTTTGTGAAAAATTGAA+TGG - chr3_4:18969940-18969959 Msa0493640:intron 25.0%
!! ACCATTCAATTTTTCACAAA+AGG + chr3_4:18969944-18969963 None:intergenic 25.0%
!!! ATTTACTTGCGTCTTATTTT+TGG - chr3_4:18970031-18970050 Msa0493640:intron 25.0%
!!! GCAATCAGAGTTTTAAATAA+AGG - chr3_4:18970237-18970256 Msa0493640:intron 25.0%
CATGGAACAATATAAATGCA+GGG + chr3_4:18963190-18963209 None:intergenic 30.0%
TCATGGAACAATATAAATGC+AGG + chr3_4:18963191-18963210 None:intergenic 30.0%
TAGCATGTTCATCATTCAAA+TGG + chr3_4:18963489-18963508 None:intergenic 30.0%
! ATTTAGGTACACTCCTTTTT+GGG + chr3_4:18963537-18963556 None:intergenic 30.0%
! AATTTAGGTACACTCCTTTT+TGG + chr3_4:18963538-18963557 None:intergenic 30.0%
!!! TTGAAACAACGTTGTTTTTC+AGG - chr3_4:18964451-18964470 Msa0493640:intron 30.0%
!! CTTTTCTCTTCCAATTTGTT+TGG + chr3_4:18964572-18964591 None:intergenic 30.0%
CAAACAAATTGGAAGAGAAA+AGG - chr3_4:18964570-18964589 Msa0493640:intron 30.0%
TGAAGTTCTTAGGATTTATG+TGG - chr3_4:18964606-18964625 Msa0493640:intron 30.0%
! TGTTGGTATCATTTCTCTTT+TGG - chr3_4:18964718-18964737 Msa0493640:CDS 30.0%
TTCATTGAAGAGAATAATGC+TGG - chr3_4:18964761-18964780 Msa0493640:CDS 30.0%
!!! ATTATATACCCTTGTTTTGG+GGG + chr3_4:18964819-18964838 None:intergenic 30.0%
! ATTTTGCACCACAATTTTGA+AGG - chr3_4:18964995-18965014 Msa0493640:intron 30.0%
GCATATAACCTTCAAAATTG+TGG + chr3_4:18965006-18965025 None:intergenic 30.0%
!!! AAGGTTATATGCTTGTTTTG+AGG - chr3_4:18965014-18965033 Msa0493640:intron 30.0%
!!! GAAATATTTTGGTGAAGTGA+AGG - chr3_4:18965099-18965118 Msa0493640:intron 30.0%
AAGTGAAGGACTTAATTGAT+TGG - chr3_4:18965113-18965132 Msa0493640:intron 30.0%
AATCAAAGTGAATAGTGCTA+GGG - chr3_4:18965388-18965407 Msa0493640:intron 30.0%
AGTTGGTCATTGAAATTGTA+GGG + chr3_4:18965520-18965539 None:intergenic 30.0%
! AAGTTGGTCATTGAAATTGT+AGG + chr3_4:18965521-18965540 None:intergenic 30.0%
TTTCTTGCTACAAAACATGT+AGG - chr3_4:18965614-18965633 Msa0493640:intron 30.0%
! AGAAATTACCAATTGCTGTT+AGG + chr3_4:18965956-18965975 None:intergenic 30.0%
! CTTATTTAAAGTCAGAGTTC+CGG + chr3_4:18966231-18966250 None:intergenic 30.0%
! TTGATTGAGGTTTTTGCTAA+GGG - chr3_4:18966269-18966288 Msa0493640:intron 30.0%
GCATATTTATTTACCTCCTT+TGG + chr3_4:18966392-18966411 None:intergenic 30.0%
!! TTAACTTACATTGACTCTGA+CGG - chr3_4:18966667-18966686 Msa0493640:CDS 30.0%
!!! ACTATTTGTTTTGTTAGCAG+TGG - chr3_4:18966731-18966750 Msa0493640:intron 30.0%
ACATAATCATAATCATACGG+TGG + chr3_4:18966759-18966778 None:intergenic 30.0%
CAATAGCATCAACAAAAGAA+GGG + chr3_4:18966984-18967003 None:intergenic 30.0%
TCAATAGCATCAACAAAAGA+AGG + chr3_4:18966985-18967004 None:intergenic 30.0%
! CTTTTGTTGATGCTATTGAA+TGG - chr3_4:18966986-18967005 Msa0493640:intron 30.0%
GTGAATGTTAAGATGATTAC+TGG - chr3_4:18967146-18967165 Msa0493640:intron 30.0%
ATGATTACTGGTAAGATTTG+AGG - chr3_4:18967158-18967177 Msa0493640:intron 30.0%
AAACATATATGTGGAATGAC+AGG - chr3_4:18967566-18967585 Msa0493640:CDS 30.0%
GTGTTAGAATGCTAAAGATT+TGG + chr3_4:18967813-18967832 None:intergenic 30.0%
ATTGTGGTAAGTGCAAAAAT+AGG - chr3_4:18967879-18967898 Msa0493640:CDS 30.0%
AAAATCAAACTTCCAGATCA+AGG + chr3_4:18968040-18968059 None:intergenic 30.0%
TATCTCACCATCATTTAGTA+TGG + chr3_4:18968088-18968107 None:intergenic 30.0%
TACCATTATGACAATATCCA+AGG - chr3_4:18968190-18968209 Msa0493640:intron 30.0%
ATCCTTGGATATTGTCATAA+TGG + chr3_4:18968195-18968214 None:intergenic 30.0%
!!! TCATTTCATCAGGGTTTTTT+CGG + chr3_4:18968465-18968484 None:intergenic 30.0%
AAAAAACCCTGATGAAATGA+TGG - chr3_4:18968465-18968484 Msa0493640:intron 30.0%
!! GACTTATAATACTGACTTGT+AGG + chr3_4:18968501-18968520 None:intergenic 30.0%
ACAAGTCAGTATTATAAGTC+AGG - chr3_4:18968501-18968520 Msa0493640:intron 30.0%
TGTATGATCATCAAGAATGA+GGG + chr3_4:18968677-18968696 None:intergenic 30.0%
!! GCAGTGTACATTTTATTTAG+CGG + chr3_4:18968728-18968747 None:intergenic 30.0%
TTTGCAAGAATTAAGGGAAT+GGG - chr3_4:18968926-18968945 Msa0493640:intron 30.0%
ACGAATTTGAGTATATCAAG+GGG + chr3_4:18969001-18969020 None:intergenic 30.0%
TTTGAAAAAGGTTCTCAAGA+GGG + chr3_4:18969121-18969140 None:intergenic 30.0%
ATTTGAAAAAGGTTCTCAAG+AGG + chr3_4:18969122-18969141 None:intergenic 30.0%
! GTTTTACAAGTGTACTTTTC+AGG + chr3_4:18969253-18969272 None:intergenic 30.0%
! AGTAATATAATGCTGCTTCT+AGG + chr3_4:18969336-18969355 None:intergenic 30.0%
TTCACAACAAAGAAAGACTA+TGG - chr3_4:18969433-18969452 Msa0493640:intron 30.0%
ATTCTTGTCATTGAAAAGGT+TGG + chr3_4:18969530-18969549 None:intergenic 30.0%
AGCTATTCTTGTCATTGAAA+AGG + chr3_4:18969534-18969553 None:intergenic 30.0%
! TTAAATTTGTTCACAGGCTT+AGG - chr3_4:18969707-18969726 Msa0493640:intron 30.0%
! TAAATTTGTTCACAGGCTTA+GGG - chr3_4:18969708-18969727 Msa0493640:intron 30.0%
!!! CATTTGTTGTTTTTGCTTCT+TGG + chr3_4:18969870-18969889 None:intergenic 30.0%
!!! GTGTTTTTAGATTAGGTTGA+AGG - chr3_4:18969916-18969935 Msa0493640:intron 30.0%
TACCAAATAACATGGTTGAT+AGG - chr3_4:18970008-18970027 Msa0493640:intron 30.0%
ATCCTATCAACCATGTTATT+TGG + chr3_4:18970013-18970032 None:intergenic 30.0%
TTAATGTATCTGCTCAACAT+AGG + chr3_4:18970549-18970568 None:intergenic 30.0%
GCAGATACATTAACATTATC+TGG - chr3_4:18970556-18970575 Msa0493640:five_prime_UTR 30.0%
CTATTAAGACTCTGTGTGTT+TGG - chr3_4:18963247-18963266 Msa0493640:three_prime_UTR 35.0%
AATTTGAACACTGTCCAACA+TGG - chr3_4:18963271-18963290 Msa0493640:three_prime_UTR 35.0%
ATTTGAACACTGTCCAACAT+GGG - chr3_4:18963272-18963291 Msa0493640:three_prime_UTR 35.0%
!!! TCTCGTTTTTTATCTCCTCA+AGG + chr3_4:18963307-18963326 None:intergenic 35.0%
AAAAAACGAGAACGTTGATC+TGG - chr3_4:18963316-18963335 Msa0493640:three_prime_UTR 35.0%
! CTGTGTTTACATTTTCTGCA+TGG - chr3_4:18963378-18963397 Msa0493640:three_prime_UTR 35.0%
TTCACAGCACTTTGTGATAT+AGG - chr3_4:18963605-18963624 Msa0493640:three_prime_UTR 35.0%
AGCACTTTGTGATATAGGAA+GGG - chr3_4:18963610-18963629 Msa0493640:three_prime_UTR 35.0%
TGAATTACAAGTGCCTAAAG+AGG + chr3_4:18963734-18963753 None:intergenic 35.0%
ATGACACACAACTTAGGTTT+AGG + chr3_4:18964168-18964187 None:intergenic 35.0%
GGTTTAATGACACACAACTT+AGG + chr3_4:18964174-18964193 None:intergenic 35.0%
AGTGTTTGGTCCAAACAAAT+TGG - chr3_4:18964559-18964578 Msa0493640:intron 35.0%
TTATGTGGAACCCTTTATCA+TGG - chr3_4:18964621-18964640 Msa0493640:intron 35.0%
TATGTGGAACCCTTTATCAT+GGG - chr3_4:18964622-18964641 Msa0493640:intron 35.0%
CTTCCATAACCCATGATAAA+GGG + chr3_4:18964634-18964653 None:intergenic 35.0%
!!! GTTATATGCTTGTTTTGAGG+CGG - chr3_4:18965017-18965036 Msa0493640:intron 35.0%
TGGAGAGTAAATACGCAAAT+TGG - chr3_4:18965220-18965239 Msa0493640:CDS 35.0%
GAATCAAAGTGAATAGTGCT+AGG - chr3_4:18965387-18965406 Msa0493640:intron 35.0%
!! AACATGTAGGTTCTAAGAGA+TGG - chr3_4:18965627-18965646 Msa0493640:intron 35.0%
! TGAAGAAGATGCTGCAATTT+TGG - chr3_4:18965659-18965678 Msa0493640:intron 35.0%
TAATGCTGATGATATCACCT+GGG + chr3_4:18965686-18965705 None:intergenic 35.0%
TTAATGCTGATGATATCACC+TGG + chr3_4:18965687-18965706 None:intergenic 35.0%
! TCTGGTTCAACTGTTAAGAA+AGG - chr3_4:18965828-18965847 Msa0493640:intron 35.0%
! TTTTGGTAAAGCTGCTCATT+TGG - chr3_4:18965893-18965912 Msa0493640:CDS 35.0%
! AGACGGAATTGACAATCTTT+TGG - chr3_4:18966049-18966068 Msa0493640:CDS 35.0%
!!! CTTTTGGTTCTATTGATTGG+AGG - chr3_4:18966065-18966084 Msa0493640:CDS 35.0%
AAAACAGTTGGCATAGCAAT+TGG + chr3_4:18966095-18966114 None:intergenic 35.0%
ATGGTAACAGACAAAACAGT+TGG + chr3_4:18966107-18966126 None:intergenic 35.0%
! AACTGTTTTGTCTGTTACCA+TGG - chr3_4:18966106-18966125 Msa0493640:CDS 35.0%
AAAGAGAATGACAGCTATTG+AGG - chr3_4:18966169-18966188 Msa0493640:CDS 35.0%
AATGACAGCTATTGAGGAAA+TGG - chr3_4:18966175-18966194 Msa0493640:CDS 35.0%
! CTTGATTGAGGTTTTTGCTA+AGG - chr3_4:18966268-18966287 Msa0493640:intron 35.0%
ACCAGAAAGATGTAGCATTT+AGG + chr3_4:18966414-18966433 None:intergenic 35.0%
!!! CTGGTAACTTTTTTGTCAGT+AGG - chr3_4:18966429-18966448 Msa0493640:CDS 35.0%
AGGAATCAAACTCAATACCT+CGG - chr3_4:18966449-18966468 Msa0493640:CDS 35.0%
TATCAGAAAGATAGACCACT+GGG + chr3_4:18966523-18966542 None:intergenic 35.0%
TCTTGTCTACAGGATTGAAT+GGG + chr3_4:18966639-18966658 None:intergenic 35.0%
AATTGGCATAGATCTAGCAA+AGG - chr3_4:18966691-18966710 Msa0493640:CDS 35.0%
AACAAATAGTTTACCTGCTC+AGG + chr3_4:18966721-18966740 None:intergenic 35.0%
TCATCTTAACATTCACACCA+AGG + chr3_4:18967142-18967161 None:intergenic 35.0%
ATCATGCAGCTTAAACATTG+TGG - chr3_4:18967213-18967232 Msa0493640:intron 35.0%
! TGTGGATTTTCTCATTCTCT+AGG - chr3_4:18967231-18967250 Msa0493640:intron 35.0%
TATCCATCTTCTTCATTGCT+CGG - chr3_4:18967312-18967331 Msa0493640:intron 35.0%
TTCTCAATCAACTCATCAAC+TGG + chr3_4:18967369-18967388 None:intergenic 35.0%
!! AGTTGATGAGTTGATTGAGA+AGG - chr3_4:18967368-18967387 Msa0493640:intron 35.0%
CATAACCATCATTGTTGTGA+AGG + chr3_4:18967427-18967446 None:intergenic 35.0%
CAAGAGAGGAAACATATATG+TGG - chr3_4:18967557-18967576 Msa0493640:CDS 35.0%
CAGTATAGTTCTTCATCCTT+TGG + chr3_4:18967748-18967767 None:intergenic 35.0%
GTCAATTACCATTCGTATTG+TGG - chr3_4:18967863-18967882 Msa0493640:CDS 35.0%
CAATGAACATGAAACCAAAC+TGG + chr3_4:18968017-18968036 None:intergenic 35.0%
ATAATGGTACCTAGTAACAG+GGG + chr3_4:18968179-18968198 None:intergenic 35.0%
CATAATGGTACCTAGTAACA+GGG + chr3_4:18968180-18968199 None:intergenic 35.0%
TCATAATGGTACCTAGTAAC+AGG + chr3_4:18968181-18968200 None:intergenic 35.0%
! TAATGACAGTGGTGTTTTTC+TGG - chr3_4:18968300-18968319 Msa0493640:intron 35.0%
CTACTAGGAGATACTATTGA+GGG + chr3_4:18968376-18968395 None:intergenic 35.0%
AACACGACTTCTATTATTGC+AGG - chr3_4:18968417-18968436 Msa0493640:intron 35.0%
CTATTATTGCAGGACAAGTT+TGG - chr3_4:18968427-18968446 Msa0493640:intron 35.0%
!! AATACTGACTTGTAGGTAGA+GGG + chr3_4:18968494-18968513 None:intergenic 35.0%
!! TAATACTGACTTGTAGGTAG+AGG + chr3_4:18968495-18968514 None:intergenic 35.0%
!! CAATCATAAAAGCACCCAAT+AGG + chr3_4:18968585-18968604 None:intergenic 35.0%
GTGTATGATCATCAAGAATG+AGG + chr3_4:18968678-18968697 None:intergenic 35.0%
!! GTGTACATTTTATTTAGCGG+TGG + chr3_4:18968725-18968744 None:intergenic 35.0%
AATTGTGTTACCAGCTGATA+AGG + chr3_4:18968833-18968852 None:intergenic 35.0%
TTGGAGCTTTGCAAGAATTA+AGG - chr3_4:18968919-18968938 Msa0493640:intron 35.0%
TGGAGCTTTGCAAGAATTAA+GGG - chr3_4:18968920-18968939 Msa0493640:intron 35.0%
CTTTGCAAGAATTAAGGGAA+TGG - chr3_4:18968925-18968944 Msa0493640:intron 35.0%
AAGAATTAAGGGAATGGGAT+GGG - chr3_4:18968931-18968950 Msa0493640:intron 35.0%
CGAATTTGAGTATATCAAGG+GGG + chr3_4:18969000-18969019 None:intergenic 35.0%
! GAGGGTCTTGTATTAAGATA+CGG + chr3_4:18969103-18969122 None:intergenic 35.0%
TCAATGACAAGAATAGCTAC+AGG - chr3_4:18969536-18969555 Msa0493640:intron 35.0%
CAATGACAAGAATAGCTACA+GGG - chr3_4:18969537-18969556 Msa0493640:intron 35.0%
AGCAAAAACAACAAATGCAG+TGG - chr3_4:18969873-18969892 Msa0493640:intron 35.0%
AGAGGAGATACTATTCTCTT+AGG - chr3_4:18969985-18970004 Msa0493640:intron 35.0%
CTCTTAGGTACCAAATAACA+TGG - chr3_4:18970000-18970019 Msa0493640:intron 35.0%
TTGAACGACATTAGTAGTCA+AGG + chr3_4:18970128-18970147 None:intergenic 35.0%
TCTAGCCTAAAAACAGTGAA+AGG - chr3_4:18970192-18970211 Msa0493640:intron 35.0%
CTAGCCTAAAAACAGTGAAA+GGG - chr3_4:18970193-18970212 Msa0493640:intron 35.0%
ATAAAAACTCATGTGTTGCG+AGG + chr3_4:18970287-18970306 None:intergenic 35.0%
CAATATCAAGGATTGTGATG+TGG - chr3_4:18970320-18970339 Msa0493640:intron 35.0%
TTCCTTCTTTGTTGCAGTAA+GGG + chr3_4:18970377-18970396 None:intergenic 35.0%
TTTCCTTCTTTGTTGCAGTA+AGG + chr3_4:18970378-18970397 None:intergenic 35.0%
!! TGCATCTCACTTTTGTTTCT+TGG - chr3_4:18970491-18970510 Msa0493640:five_prime_UTR 35.0%
!! GGATTGATTTTTCCTCTCAT+TGG + chr3_4:18970528-18970547 None:intergenic 35.0%
CAGCACTTTGTGATATAGGA+AGG - chr3_4:18963609-18963628 Msa0493640:three_prime_UTR 40.0%
TGCATTCACCAATCCTCTTT+AGG - chr3_4:18963718-18963737 Msa0493640:three_prime_UTR 40.0%
TACAAGTGCCTAAAGAGGAT+TGG + chr3_4:18963729-18963748 None:intergenic 40.0%
AGCCAGTTCACCTATTAGTT+TGG - chr3_4:18963988-18964007 Msa0493640:CDS 40.0%
GACCAAACTAATAGGTGAAC+TGG + chr3_4:18963993-18964012 None:intergenic 40.0%
! GAACCCTTTATCATGGGTTA+TGG - chr3_4:18964628-18964647 Msa0493640:intron 40.0%
GCTTCCATAACCCATGATAA+AGG + chr3_4:18964635-18964654 None:intergenic 40.0%
TATGGAAGCTGCTGCTATTA+TGG - chr3_4:18964646-18964665 Msa0493640:intron 40.0%
TGCTATTATGGCCATTGCTT+TGG - chr3_4:18964658-18964677 Msa0493640:intron 40.0%
AATATTTCAAAACGGCCCCT+AGG + chr3_4:18965469-18965488 None:intergenic 40.0%
!! TGTAGGTTCTAAGAGATGGT+AGG - chr3_4:18965631-18965650 Msa0493640:intron 40.0%
GTTGATCAGTCTGCTTTAAC+CGG - chr3_4:18965762-18965781 Msa0493640:intron 40.0%
TTTAACCGGAGAATCTCTTC+CGG - chr3_4:18965776-18965795 Msa0493640:intron 40.0%
CCAGAAAACACTTCATCTGA+GGG + chr3_4:18965813-18965832 None:intergenic 40.0%
ACCAGAAAACACTTCATCTG+AGG + chr3_4:18965814-18965833 None:intergenic 40.0%
!!! ACTGGAGTGCACACATTTTT+TGG - chr3_4:18965876-18965895 Msa0493640:intron 40.0%
CTGAAAGTGACCAACTTGAT+TGG + chr3_4:18965928-18965947 None:intergenic 40.0%
CAGAAAGTCCTAACAGCAAT+TGG - chr3_4:18965945-18965964 Msa0493640:intron 40.0%
TGCATTTGCTCAATTGCTGT+TGG - chr3_4:18965975-18965994 Msa0493640:intron 40.0%
!! CTATACTTGCGGTGTTGTAT+CGG + chr3_4:18966029-18966048 None:intergenic 40.0%
CAATTCCGTCTCTATACTTG+CGG + chr3_4:18966040-18966059 None:intergenic 40.0%
TTGTCTGTTACCATGGCTAT+TGG - chr3_4:18966113-18966132 Msa0493640:CDS 40.0%
TCTCACAGACTTTCTCAACA+AGG - chr3_4:18966137-18966156 Msa0493640:CDS 40.0%
!! TTTTGCTAAGGGTGTAGAGA+AGG - chr3_4:18966280-18966299 Msa0493640:intron 40.0%
ATGTTATCCTTCTTGCAGCA+AGG - chr3_4:18966306-18966325 Msa0493640:intron 40.0%
TGTTATCCTTCTTGCAGCAA+GGG - chr3_4:18966307-18966326 Msa0493640:intron 40.0%
GCCTAAATGCTACATCTTTC+TGG - chr3_4:18966410-18966429 Msa0493640:CDS 40.0%
GGAATCAAACTCAATACCTC+GGG - chr3_4:18966450-18966469 Msa0493640:CDS 40.0%
GAATCAAACTCAATACCTCG+GGG - chr3_4:18966451-18966470 Msa0493640:CDS 40.0%
ATCAGAAAGATAGACCACTG+GGG + chr3_4:18966522-18966541 None:intergenic 40.0%
GTATCAGAAAGATAGACCAC+TGG + chr3_4:18966524-18966543 None:intergenic 40.0%
CTCTTGTCTACAGGATTGAA+TGG + chr3_4:18966640-18966659 None:intergenic 40.0%
AAAGCAGTTCTCTTGTCTAC+AGG + chr3_4:18966649-18966668 None:intergenic 40.0%
!! ACATTGACTCTGACGGAAAT+TGG - chr3_4:18966674-18966693 Msa0493640:CDS 40.0%
GGGCTATCTTTATCTTTCTC+AGG + chr3_4:18967032-18967051 None:intergenic 40.0%
GAGAAAGATAAAGATAGCCC+TGG - chr3_4:18967032-18967051 Msa0493640:intron 40.0%
AACAGACCAACAAATTGCCA+TGG + chr3_4:18967062-18967081 None:intergenic 40.0%
TACCTCTATTTGATCCTCCT+AGG - chr3_4:18967081-18967100 Msa0493640:CDS 40.0%
TAGGTCCTTCACAACAATGA+TGG - chr3_4:18967419-18967438 Msa0493640:CDS 40.0%
TCGTAAAGAAACTGCAAGAG+AGG - chr3_4:18967543-18967562 Msa0493640:CDS 40.0%
ATATGTGGAATGACAGGTGA+TGG - chr3_4:18967572-18967591 Msa0493640:CDS 40.0%
ATATCTGCTCTCTTTAACGC+AGG + chr3_4:18967611-18967630 None:intergenic 40.0%
GCGTTAAAGAGAGCAGATAT+TGG - chr3_4:18967611-18967630 Msa0493640:CDS 40.0%
!! AATATCAGAAGCACCTCTAG+CGG + chr3_4:18967663-18967682 None:intergenic 40.0%
CTAATAATGACACTCAGACC+AGG + chr3_4:18967698-18967717 None:intergenic 40.0%
! CAAGCAGAGCAATTTTCCAA+AGG - chr3_4:18967729-18967748 Msa0493640:CDS 40.0%
TGCACTTACCACAATACGAA+TGG + chr3_4:18967874-18967893 None:intergenic 40.0%
TCATGTTCATTGCCTTGATC+TGG - chr3_4:18968025-18968044 Msa0493640:CDS 40.0%
!! GTTTGATTTTGCACCCTTCA+TGG - chr3_4:18968050-18968069 Msa0493640:CDS 40.0%
AGATGGTTTCACTCTATCCT+TGG + chr3_4:18968210-18968229 None:intergenic 40.0%
! CTGAGAGAGATATTTGCTAC+TGG - chr3_4:18968251-18968270 Msa0493640:intron 40.0%
!! GAAGGATACCGATTTCTTCT+CGG - chr3_4:18968328-18968347 Msa0493640:intron 40.0%
GCTACTAGGAGATACTATTG+AGG + chr3_4:18968377-18968396 None:intergenic 40.0%
! AGGCACTAATTTTTGTCACC+AGG - chr3_4:18968521-18968540 Msa0493640:intron 40.0%
TTTCAACAAAGGACCAGCTA+CGG + chr3_4:18968549-18968568 None:intergenic 40.0%
AAGACCAGGTCTTTCAACAA+AGG + chr3_4:18968560-18968579 None:intergenic 40.0%
! TGCTTTTATGATTGCTCAGC+TGG - chr3_4:18968591-18968610 Msa0493640:intron 40.0%
!! ATTTTATTTAGCGGTGGTCG+TGG + chr3_4:18968719-18968738 None:intergenic 40.0%
AGTTACACTTCTGTTGCCTT+AGG - chr3_4:18968775-18968794 Msa0493640:intron 40.0%
CAAGAATTAAGGGAATGGGA+TGG - chr3_4:18968930-18968949 Msa0493640:intron 40.0%
AGAATTAAGGGAATGGGATG+GGG - chr3_4:18968932-18968951 Msa0493640:intron 40.0%
! GTAATCCGCTATGTTCTAAG+TGG - chr3_4:18969019-18969038 Msa0493640:CDS 40.0%
! CTTTGCCACTTAGAACATAG+CGG + chr3_4:18969027-18969046 None:intergenic 40.0%
! ATGTTCTAAGTGGCAAAGCT+TGG - chr3_4:18969029-18969048 Msa0493640:CDS 40.0%
! TGTTCTAAGTGGCAAAGCTT+GGG - chr3_4:18969030-18969049 Msa0493640:CDS 40.0%
CAAAGCTTGGGATAATCTTC+TGG - chr3_4:18969042-18969061 Msa0493640:CDS 40.0%
! GGATAATCTTCTGGAGAACA+AGG - chr3_4:18969051-18969070 Msa0493640:CDS 40.0%
! GGTCTTGTATTAAGATACGG+AGG + chr3_4:18969100-18969119 None:intergenic 40.0%
!! ATAATGCTGCTTCTAGGACT+CGG + chr3_4:18969330-18969349 None:intergenic 40.0%
! TTGAAAAGGTTGGTTGTGTC+AGG + chr3_4:18969520-18969539 None:intergenic 40.0%
GAATCAGTCGTGAAGCTTAA+GGG - chr3_4:18969757-18969776 Msa0493640:intron 40.0%
GACAACCTTCAAGAAGAACA+GGG - chr3_4:18969828-18969847 Msa0493640:intron 40.0%
ATAGTATCTCCTCTAGCTAG+TGG + chr3_4:18969979-18969998 None:intergenic 40.0%
GCTAGACATGAAGTCAGAAA+AGG + chr3_4:18970178-18970197 None:intergenic 40.0%
!! CTCACCCTTTCACTGTTTTT+AGG + chr3_4:18970200-18970219 None:intergenic 40.0%
AACCCTTACTGCAACAAAGA+AGG - chr3_4:18970372-18970391 Msa0493640:intron 40.0%
GTTTAGTCGTAACCAATGAG+AGG - chr3_4:18970513-18970532 Msa0493640:five_prime_UTR 40.0%
!! AGCGGTTGGTTTGAGTCATA+GGG + chr3_4:18963111-18963130 None:intergenic 45.0%
TACTGAGTGATGCAGAGTCA+TGG + chr3_4:18963208-18963227 None:intergenic 45.0%
TTTGTGATATAGGAAGGGCG+TGG - chr3_4:18963615-18963634 Msa0493640:three_prime_UTR 45.0%
TCAGGAACGAATTCCAGTAG+AGG - chr3_4:18964469-18964488 Msa0493640:intron 45.0%
CAGCTGAAATGTTCAAGAGC+AGG - chr3_4:18964503-18964522 Msa0493640:intron 45.0%
GCAGGTTTAACATCAGACGA+AGG - chr3_4:18964521-18964540 Msa0493640:intron 45.0%
ACCAAACACTTGAAGCCTGT+TGG + chr3_4:18964549-18964568 None:intergenic 45.0%
ATGGCCATTGCTTTGGCTAA+TGG - chr3_4:18964665-18964684 Msa0493640:intron 45.0%
ACAAAATCCTGCCAATCAGG+AGG + chr3_4:18964701-18964720 None:intergenic 45.0%
CCAACAAAATCCTGCCAATC+AGG + chr3_4:18964704-18964723 None:intergenic 45.0%
! CCTGATTGGCAGGATTTTGT+TGG - chr3_4:18964701-18964720 Msa0493640:CDS 45.0%
TGGTTTAGCCCCCAAAACAA+GGG - chr3_4:18964808-18964827 Msa0493640:CDS 45.0%
!! AGGTTCTAAGAGATGGTAGG+TGG - chr3_4:18965634-18965653 Msa0493640:intron 45.0%
TCTGAGGGATTCTTTGTTGC+CGG + chr3_4:18965798-18965817 None:intergenic 45.0%
!! CCCTCAGATGAAGTGTTTTC+TGG - chr3_4:18965810-18965829 Msa0493640:intron 45.0%
GAAGCAGTTGTCATTGCTAC+TGG - chr3_4:18965858-18965877 Msa0493640:intron 45.0%
GTTGACAGCACCAATCAAGT+TGG - chr3_4:18965915-18965934 Msa0493640:intron 45.0%
CAACACCGCAAGTATAGAGA+CGG - chr3_4:18966032-18966051 Msa0493640:CDS 45.0%
TCTGTGAGAACCAATAGCCA+TGG + chr3_4:18966126-18966145 None:intergenic 45.0%
ACAGCTATTGAGGAAATGGC+AGG - chr3_4:18966179-18966198 Msa0493640:CDS 45.0%
CAGCTATTGAGGAAATGGCA+GGG - chr3_4:18966180-18966199 Msa0493640:CDS 45.0%
TATTGAGGAAATGGCAGGGA+TGG - chr3_4:18966184-18966203 Msa0493640:CDS 45.0%
GCCATAGATGCTGCAATTGT+TGG - chr3_4:18966353-18966372 Msa0493640:CDS 45.0%
GCCAACAATTGCAGCATCTA+TGG + chr3_4:18966357-18966376 None:intergenic 45.0%
! GGGTGTTATAATAAACCCCG+AGG + chr3_4:18966469-18966488 None:intergenic 45.0%
GTCTAGCAACACCCAAAGAA+CGG + chr3_4:18966903-18966922 None:intergenic 45.0%
!! TTCTTTGGGTGTTGCTAGAC+AGG - chr3_4:18966903-18966922 Msa0493640:CDS 45.0%
TGCCTAGGAGGATCAAATAG+AGG + chr3_4:18967086-18967105 None:intergenic 45.0%
GTTTCAGCACTATCATGCCT+AGG + chr3_4:18967101-18967120 None:intergenic 45.0%
AAGGTTCAGAGCTCTTGTGA+TGG + chr3_4:18967123-18967142 None:intergenic 45.0%
!! ATCACAAGAGCTCTGAACCT+TGG - chr3_4:18967122-18967141 Msa0493640:CDS 45.0%
TTGTTCCCATTCCAAGCCTT+CGG + chr3_4:18967287-18967306 None:intergenic 45.0%
TGACCGAGCAATGAAGAAGA+TGG + chr3_4:18967318-18967337 None:intergenic 45.0%
TTCATTGCTCGGTCAAAGCA+AGG - chr3_4:18967323-18967342 Msa0493640:intron 45.0%
! GAGTTGATTGAGAAGGCTGA+TGG - chr3_4:18967375-18967394 Msa0493640:CDS 45.0%
!!! GGATTTGCTGGAGTTTTTCC+TGG - chr3_4:18967396-18967415 Msa0493640:CDS 45.0%
! TTGCTGGAGTTTTTCCTGGT+AGG - chr3_4:18967400-18967419 Msa0493640:CDS 45.0%
ATTGTTGTGAAGGACCTACC+AGG + chr3_4:18967417-18967436 None:intergenic 45.0%
GATATTGTCCTTACTGAGCC+TGG - chr3_4:18967677-18967696 Msa0493640:CDS 45.0%
TTTCCTTCACCCCTGTTACT+AGG - chr3_4:18968167-18968186 Msa0493640:intron 45.0%
AGTTTCCAACTGTCTGGTTG+TGG + chr3_4:18968233-18968252 None:intergenic 45.0%
TCTCTCAGTTTCCAACTGTC+TGG + chr3_4:18968239-18968258 None:intergenic 45.0%
!! TTTGCTACTGGTGTTGTGCT+AGG - chr3_4:18968263-18968282 Msa0493640:intron 45.0%
TGTTGTGCTAGGTAGCTACA+TGG - chr3_4:18968274-18968293 Msa0493640:intron 45.0%
CTACATGGCACTAATGACAG+TGG - chr3_4:18968289-18968308 Msa0493640:intron 45.0%
!!! GGTGTTTTTCTGGCTCATGA+AGG - chr3_4:18968310-18968329 Msa0493640:intron 45.0%
TTCAACAAAGGACCAGCTAC+GGG + chr3_4:18968548-18968567 None:intergenic 45.0%
TGGTCCTTTGTTGAAAGACC+TGG - chr3_4:18968553-18968572 Msa0493640:intron 45.0%
! AAGACCTGGTCTTCTCCTAT+TGG - chr3_4:18968567-18968586 Msa0493640:intron 45.0%
! AGACCTGGTCTTCTCCTATT+GGG - chr3_4:18968568-18968587 Msa0493640:intron 45.0%
TACGGAGGTAGTAAGACAGA+AGG + chr3_4:18969085-18969104 None:intergenic 45.0%
AAGAAGAGAGAGAAGCTCAG+TGG - chr3_4:18969458-18969477 Msa0493640:intron 45.0%
AGAAGAGAGAGAAGCTCAGT+GGG - chr3_4:18969459-18969478 Msa0493640:intron 45.0%
TCATCGAGTCTGTGTCTGAA+AGG - chr3_4:18969614-18969633 Msa0493640:intron 45.0%
TAGGGAGCTTCACACTCTAA+AGG - chr3_4:18969726-18969745 Msa0493640:intron 45.0%
AGGGAGCTTCACACTCTAAA+GGG - chr3_4:18969727-18969746 Msa0493640:intron 45.0%
CGAATCAGTCGTGAAGCTTA+AGG - chr3_4:18969756-18969775 Msa0493640:intron 45.0%
GGACAACCTTCAAGAAGAAC+AGG - chr3_4:18969827-18969846 Msa0493640:intron 45.0%
CGTAACCCTGTTCTTCTTGA+AGG + chr3_4:18969836-18969855 None:intergenic 45.0%
! AAAGGCATGCGACCACAATT+TGG - chr3_4:18970255-18970274 Msa0493640:intron 45.0%
AAGGCATGCGACCACAATTT+GGG - chr3_4:18970256-18970275 Msa0493640:intron 45.0%
!! CAGCGGTTGGTTTGAGTCAT+AGG + chr3_4:18963112-18963131 None:intergenic 50.0%
GTGAAGAAAGGGTGATGCAG+CGG + chr3_4:18963129-18963148 None:intergenic 50.0%
TGAACACTGTCCAACATGGG+AGG - chr3_4:18963275-18963294 Msa0493640:three_prime_UTR 50.0%
AAGGCTGATACCTCCCATGT+TGG + chr3_4:18963288-18963307 None:intergenic 50.0%
! CGTGGCGTGTTCTTGTGTTT+TGG - chr3_4:18963633-18963652 Msa0493640:three_prime_UTR 50.0%
TGCTCGAACACTTCCTCTAC+TGG + chr3_4:18964485-18964504 None:intergenic 50.0%
GCCAACAGGCTTCAAGTGTT+TGG - chr3_4:18964545-18964564 Msa0493640:intron 50.0%
GCCATTGCTTTGGCTAATGG+CGG - chr3_4:18964668-18964687 Msa0493640:intron 50.0%
ACCGCCATTAGCCAAAGCAA+TGG + chr3_4:18964672-18964691 None:intergenic 50.0%
ATTGCTTTGGCTAATGGCGG+TGG - chr3_4:18964671-18964690 Msa0493640:intron 50.0%
TAATGCTGCTGCTGCTCTCA+TGG - chr3_4:18964784-18964803 Msa0493640:CDS 50.0%
CTGGTTTAGCCCCCAAAACA+AGG - chr3_4:18964807-18964826 Msa0493640:CDS 50.0%
!! GATGCTGCAATTTTGGTCCC+AGG - chr3_4:18965666-18965685 Msa0493640:intron 50.0%
TGTTGCCGGAAGAGATTCTC+CGG + chr3_4:18965784-18965803 None:intergenic 50.0%
GTCCTCTGCAGTGACAAAAC+CGG - chr3_4:18966209-18966228 Msa0493640:CDS 50.0%
!! TTCCGGTTTTGTCACTGCAG+AGG + chr3_4:18966214-18966233 None:intergenic 50.0%
TAGAAGCCCTTGCTGCAAGA+AGG + chr3_4:18966316-18966335 None:intergenic 50.0%
TTCTTGCAGCAAGGGCTTCT+AGG - chr3_4:18966315-18966334 Msa0493640:intron 50.0%
!! GGCTTCTAGGACTGAGAATC+AGG - chr3_4:18966328-18966347 Msa0493640:intron 50.0%
! TGGCATGCTTGCTGATCCAA+AGG - chr3_4:18966373-18966392 Msa0493640:CDS 50.0%
! CATGCTTGCTGATCCAAAGG+AGG - chr3_4:18966376-18966395 Msa0493640:CDS 50.0%
GTTGTCGATGTGCAGTGTGT+GGG + chr3_4:18966489-18966508 None:intergenic 50.0%
AGTTGTCGATGTGCAGTGTG+TGG + chr3_4:18966490-18966509 None:intergenic 50.0%
TGAATTACACAGGCACGAGC+TGG - chr3_4:18966592-18966611 Msa0493640:intron 50.0%
GAACCTCTGCAACTGCAAAG+AGG - chr3_4:18966825-18966844 Msa0493640:intron 50.0%
CATCCTCTTTGCAGTTGCAG+AGG + chr3_4:18966831-18966850 None:intergenic 50.0%
GCAACTGCAAAGAGGATGTC+AGG - chr3_4:18966833-18966852 Msa0493640:intron 50.0%
CAAATTGCCATGGTGCACCA+GGG + chr3_4:18967052-18967071 None:intergenic 50.0%
ACAAATTGCCATGGTGCACC+AGG + chr3_4:18967053-18967072 None:intergenic 50.0%
GGTGCACCATGGCAATTTGT+TGG - chr3_4:18967053-18967072 Msa0493640:CDS 50.0%
TCAGCACTATCATGCCTAGG+AGG + chr3_4:18967098-18967117 None:intergenic 50.0%
TGATCAGCTTGCCATTGCCA+AGG - chr3_4:18967254-18967273 Msa0493640:intron 50.0%
CTTGCCATTGCCAAGGAAAC+TGG - chr3_4:18967261-18967280 Msa0493640:intron 50.0%
!! GAGAAGGCTGATGGATTTGC+TGG - chr3_4:18967384-18967403 Msa0493640:CDS 50.0%
GTACCTAGTAACAGGGGTGA+AGG + chr3_4:18968173-18968192 None:intergenic 50.0%
CAACTGTCTGGTTGTGGAGA+TGG + chr3_4:18968227-18968246 None:intergenic 50.0%
CATCTCCACAACCAGACAGT+TGG - chr3_4:18968225-18968244 Msa0493640:intron 50.0%
GGGCTGCCATCATTTCATCA+GGG + chr3_4:18968474-18968493 None:intergenic 50.0%
AGGGCTGCCATCATTTCATC+AGG + chr3_4:18968475-18968494 None:intergenic 50.0%
GTGGTCGTGGAGAAGAAATG+AGG + chr3_4:18968706-18968725 None:intergenic 50.0%
TTAAGGGAATGGGATGGGGT+TGG - chr3_4:18968936-18968955 Msa0493640:intron 50.0%
TAAGGGAATGGGATGGGGTT+GGG - chr3_4:18968937-18968956 Msa0493640:intron 50.0%
ACTGCTCAGAGGACTCTTCA+TGG - chr3_4:18969484-18969503 Msa0493640:intron 50.0%
TGCAACTTCAGCACGTCTCT+TGG + chr3_4:18969587-18969606 None:intergenic 50.0%
AGAGACGTGCTGAAGTTGCA+CGG - chr3_4:18969587-18969606 Msa0493640:intron 50.0%
TCCTCAATGCCACTAGCTAG+AGG - chr3_4:18969967-18969986 Msa0493640:intron 50.0%
TCCTCTAGCTAGTGGCATTG+AGG + chr3_4:18969971-18969990 None:intergenic 50.0%
AACTCATGTGTTGCGAGGTG+CGG + chr3_4:18970282-18970301 None:intergenic 50.0%
TCAAAACCAGCCAACCTGTC+CGG - chr3_4:18970651-18970670 Msa0493640:five_prime_UTR 50.0%
AGAAAGGGTGATGCAGCGGT+TGG + chr3_4:18963125-18963144 None:intergenic 55.0%
!! CATGGGAGGTATCAGCCTTG+AGG - chr3_4:18963289-18963308 Msa0493640:three_prime_UTR 55.0%
CATCAGACGAAGGAGCCAAC+AGG - chr3_4:18964531-18964550 Msa0493640:intron 55.0%
TGGAAGACCTCCTGATTGGC+AGG - chr3_4:18964691-18964710 Msa0493640:intron 55.0%
TCAAGCAGACGAGCATCAGC+AGG + chr3_4:18965726-18965745 None:intergenic 55.0%
TGCTGATGCTCGTCTGCTTG+AGG - chr3_4:18965725-18965744 Msa0493640:CDS 55.0%
GCTGATGCTCGTCTGCTTGA+GGG - chr3_4:18965726-18965745 Msa0493640:CDS 55.0%
!! TAGCAAAGGTGCTCCTGAGC+AGG - chr3_4:18966705-18966724 Msa0493640:CDS 55.0%
ATTGACAAGTTCGCCGAGCG+TGG - chr3_4:18966874-18966893 Msa0493640:CDS 55.0%
CAAAGAACGGAGTCCACGCT+CGG + chr3_4:18966890-18966909 None:intergenic 55.0%
GAGCGTGGACTCCGTTCTTT+GGG - chr3_4:18966889-18966908 Msa0493640:CDS 55.0%
AAGATAGCCCTGGTGCACCA+TGG - chr3_4:18967042-18967061 Msa0493640:CDS 55.0%
TCGGCCAGTTTCCTTGGCAA+TGG + chr3_4:18967268-18967287 None:intergenic 55.0%
TTGCCAAGGAAACTGGCCGA+AGG - chr3_4:18967268-18967287 Msa0493640:intron 55.0%
AAGCCTTCGGCCAGTTTCCT+TGG + chr3_4:18967274-18967293 None:intergenic 55.0%
AAGGAAACTGGCCGAAGGCT+TGG - chr3_4:18967273-18967292 Msa0493640:intron 55.0%
AACTGGCCGAAGGCTTGGAA+TGG - chr3_4:18967278-18967297 Msa0493640:intron 55.0%
ACTGGCCGAAGGCTTGGAAT+GGG - chr3_4:18967279-18967298 Msa0493640:intron 55.0%
GATGCTACAGATGCCGCTAG+AGG - chr3_4:18967647-18967666 Msa0493640:CDS 55.0%
CACTCAGACCAGGCTCAGTA+AGG + chr3_4:18967688-18967707 None:intergenic 55.0%
GCACCCAATAGGAGAAGACC+AGG + chr3_4:18968574-18968593 None:intergenic 55.0%
CTAGGAGCTGCCTTATCAGC+TGG - chr3_4:18968820-18968839 Msa0493640:intron 55.0%
TGTGGCTGCAGCTGTTATCG+CGG - chr3_4:18970338-18970357 Msa0493640:intron 55.0%
GAAACGGTAACCGGACAGGT+TGG + chr3_4:18970664-18970683 None:intergenic 55.0%
GCGGTGGAAGACCTCCTGAT+TGG - chr3_4:18964687-18964706 Msa0493640:intron 60.0%
CAACTTGCGCTAGACCCCAG+TGG - chr3_4:18966505-18966524 Msa0493640:intron 60.0%
! ACAGGCACGAGCTGGTGTCA+GGG - chr3_4:18966600-18966619 Msa0493640:intron 60.0%
CGAGCGTGGACTCCGTTCTT+TGG - chr3_4:18966888-18966907 Msa0493640:CDS 60.0%
TTGTCACCAGGTCCCGTAGC+TGG - chr3_4:18968533-18968552 Msa0493640:intron 60.0%
AAAGGACCAGCTACGGGACC+TGG + chr3_4:18968542-18968561 None:intergenic 60.0%
!! GGGGTTGGGCTGGTGTAATC+TGG - chr3_4:18968951-18968970 Msa0493640:CDS 60.0%
CTCAGTGGGCAACTGCTCAG+AGG - chr3_4:18969473-18969492 Msa0493640:intron 60.0%
GCTGCTGCTGCTCTCATGGC+TGG - chr3_4:18964788-18964807 Msa0493640:CDS 65.0%
CACAGGCACGAGCTGGTGTC+AGG - chr3_4:18966599-18966618 Msa0493640:intron 65.0%
GGAATGGGATGGGGTTGGGC+TGG - chr3_4:18968941-18968960 Msa0493640:CDS 65.0%
GCGAGGTGCGGCCCAAATTG+TGG + chr3_4:18970270-18970289 None:intergenic 65.0%
GGCTGCAGCTGTTATCGCGG+TGG - chr3_4:18970341-18970360 Msa0493640:intron 65.0%
! CGGTAACCGGACAGGTTGGC+TGG + chr3_4:18970660-18970679 None:intergenic 65.0%
! GGCACGAGCTGGTGTCAGGG+AGG - chr3_4:18966603-18966622 Msa0493640:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 18963084 18970684 18963084 ID=Msa0493640;Name=Msa0493640
chr3_4 mRNA 18963084 18970684 18963084 ID=Msa0493640-mRNA-1;Parent=Msa0493640;Name=Msa0493640-mRNA-1;_AED=0.08;_eAED=0.08;_QI=206|1|1|1|1|1|15|865|951
chr3_4 exon 18963084 18964045 18963084 ID=Msa0493640-mRNA-1:exon:5207;Parent=Msa0493640-mRNA-1
chr3_4 exon 18964160 18964341 18964160 ID=Msa0493640-mRNA-1:exon:5206;Parent=Msa0493640-mRNA-1
chr3_4 exon 18964696 18964878 18964696 ID=Msa0493640-mRNA-1:exon:5205;Parent=Msa0493640-mRNA-1
chr3_4 exon 18965156 18965329 18965156 ID=Msa0493640-mRNA-1:exon:5204;Parent=Msa0493640-mRNA-1
chr3_4 exon 18965419 18965579 18965419 ID=Msa0493640-mRNA-1:exon:5203;Parent=Msa0493640-mRNA-1
chr3_4 exon 18965669 18965750 18965669 ID=Msa0493640-mRNA-1:exon:5202;Parent=Msa0493640-mRNA-1
chr3_4 exon 18965884 18965916 18965884 ID=Msa0493640-mRNA-1:exon:5201;Parent=Msa0493640-mRNA-1
chr3_4 exon 18966002 18966240 18966002 ID=Msa0493640-mRNA-1:exon:5200;Parent=Msa0493640-mRNA-1
chr3_4 exon 18966351 18966515 18966351 ID=Msa0493640-mRNA-1:exon:5199;Parent=Msa0493640-mRNA-1
chr3_4 exon 18966601 18966745 18966601 ID=Msa0493640-mRNA-1:exon:5198;Parent=Msa0493640-mRNA-1
chr3_4 exon 18966844 18966948 18966844 ID=Msa0493640-mRNA-1:exon:5197;Parent=Msa0493640-mRNA-1
chr3_4 exon 18967042 18967164 18967042 ID=Msa0493640-mRNA-1:exon:5196;Parent=Msa0493640-mRNA-1
chr3_4 exon 18967371 18968132 18967371 ID=Msa0493640-mRNA-1:exon:5195;Parent=Msa0493640-mRNA-1
chr3_4 exon 18968939 18969295 18968939 ID=Msa0493640-mRNA-1:exon:5194;Parent=Msa0493640-mRNA-1
chr3_4 exon 18970431 18970684 18970431 ID=Msa0493640-mRNA-1:exon:5193;Parent=Msa0493640-mRNA-1
chr3_4 five_prime_UTR 18970479 18970684 18970479 ID=Msa0493640-mRNA-1:five_prime_utr;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18970431 18970478 18970431 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18968939 18969295 18968939 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18967371 18968132 18967371 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18967042 18967164 18967042 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18966844 18966948 18966844 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18966601 18966745 18966601 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18966351 18966515 18966351 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18966002 18966240 18966002 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18965884 18965916 18965884 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18965669 18965750 18965669 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18965419 18965579 18965419 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18965156 18965329 18965156 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18964696 18964878 18964696 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18964160 18964341 18964160 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 CDS 18963949 18964045 18963949 ID=Msa0493640-mRNA-1:cds;Parent=Msa0493640-mRNA-1
chr3_4 three_prime_UTR 18963084 18963948 18963084 ID=Msa0493640-mRNA-1:three_prime_utr;Parent=Msa0493640-mRNA-1
Gene Sequence

>Msa0493640

ATGGGAGGTATCAGCCTTGAGGAGATAAAAAACGAGAACGTTGATCTGGAACGAATTCCAGTAGAGGAAGTGTTCGAGCAGCTGAAATGTTCAAGAGCAGGTTTAACATCAGACGAAGGAGCCAACAGGCTTCAAGTGTTTGGTCCAAACAAATTGGAAGAGAAAAGGGAAAGCAAATTTTTGAAGTTCTTAGGATTTATGTGGAACCCTTTATCATGGGTTATGGAAGCTGCTGCTATTATGGCCATTGCTTTGGCTAATGGCGGTGGAAGACCTCCTGATTGGCAGGATTTTGTTGGTATCATTTCTCTTTTGGTTATTAACTCAACTATCAGTTTCATTGAAGAGAATAATGCTGGTAATGCTGCTGCTGCTCTCATGGCTGGTTTAGCCCCCAAAACAAGGGTTCTAAGAGATGGTAGGTGGTCTGAAGAAGATGCTGCAATTTTGGTCCCAGGTGATATCATCAGCATTAAATTAGGAGATATCATTCCTGCTGATGCTCGTCTGCTTGAGGGTGATGCTTTGAGTGTTGATCAGTCTGCTTTAACCGGAGAATCTCTTCCGGCAACAAAGAATCCCTCAGATGAAGTGTTTTCTGGTTCAACTGTTAAGAAAGGTGAGATTGAAGCAGTTGTCATTGCTACTGGAGTGCACACATTTTTTGGTAAAGCTGCTCATTTGGTTGACAGCACCAATCAAGTTGGTCACTTTCAGAAAGTCCTAACAGCAATTGGTAATTTCTGCATTTGCTCAATTGCTGTTGGAATACTGATTGAGCTCGTTGTCATGTATCCGATACAACACCGCAAGTATAGAGACGGAATTGACAATCTTTTGGTTCTATTGATTGGAGGAATTCCAATTGCTATGCCAACTGTTTTGTCTGTTACCATGGCTATTGGTTCTCACAGACTTTCTCAACAAGGTGCTATTACAAAGAGAATGACAGCTATTGAGGAAATGGCAGGGATGGATGTCCTCTGCAGTGACAAAACCGGAACTCTGACTTTAAATAAGTTATCTGTTGATAAAAACTTGATTGAGGTTTTTGCTAAGGGTGTAGAGAAGGATTATGTTATCCTTCTTGCAGCAAGGGCTTCTAGGACTGAGAATCAGGATGCCATAGATGCTGCAATTGTTGGCATGCTTGCTGATCCAAAGGAGGCACGAGCTGGTGTCAGGGAGGTTCATTTTTTCCCATTCAATCCTGTAGACAAGAGAACTGCTTTAACTTACATTGACTCTGACGGAAATTGGCATAGATCTAGCAAAGGTGCTCCTGAGCAGATATTGAACCTCTGCAACTGCAAAGAGGATGTCAGGAAAAAAGCTCATTCAACAATTGACAAGTTCGCCGAGCGTGGACTCCGTTCTTTGGGTGTTGCTAGACAGGAAATACCTGAGAAAGATAAAGATAGCCCTGGTGCACCATGGCAATTTGTTGGTCTGTTACCTCTATTTGATCCTCCTAGGCATGATAGTGCTGAAACCATCACAAGAGCTCTGAACCTTGGTGTGAATGTTAAGATGATTACTGGTGATCAGCTTGCCATTGCCAAGGAAACTGGCCGAAGGCTTGGAATGGGAACAAACATGTATCCATCTTCTTCATTGCTCGGTCAAAGCAAGGATGCTGCTGTTTCAGCTCTTCCAGTTGATGAGTTGATTGAGAAGGCTGATGGATTTGCTGGAGTTTTTCCTGAACACAAGTATGAAATCGTAAAGAAACTGCAAGAGAGGAAACATATATGTGGAATGACAGGTGATGGTGTCAACGACGCTCCTGCGTTAAAGAGAGCAGATATTGGAATTGCTGTTGCTGATGCTACAGATGCCGCTAGAGGTGCTTCTGATATTGTCCTTACTGAGCCTGGTCTGAGTGTCATTATTAGTGCAGTGCTCACAAGCAGAGCAATTTTCCAAAGGATGAAGAACTATACTATCTACGCTGTGTCAATTACCATTCGTATTGTGTTTGGTTTCATGTTCATTGCCTTGATCTGGAAGTTTGATTTTGCACCCTTCATGGTGTTGATTATCGCCATACTAAATGATGGTACCATTATGACAATATCCAAGGATAGAGTGAAACCATCTCCACAACCAGACAGTTGGAAACTGAGAGAGATATTTGCTACTGGTGTTGTGCTAGGTAGCTACATGGCACTAATGACAGTGGTGTTTTTCTGGCTCATGAAGGATACCGATTTCTTCTCGGACAAGTTTGGTGTGAGATCTATCCGAAAAAACCCTGATGAAATGATGGCAGCCCTCTACCTACAAGTCAGTATTATAAGTCAGGCACTAATTTTTGTCACCAGGTCCCGTAGCTGGTCCTTTGTTGAAAGACCTGGTCTTCTCCTATTGGGTGCTTTTATGATTGCTCAGCTGGTGGCAACTTTTATAGCAGTATATGCTAATTGGAGCTTTGCAAGAATTAAGGGAATGGGATGGGGTTGGGCTGGTGTAATCTGGATGTACAGTATAGTGACATATATCCCCCTTGATATACTCAAATTCGTAATCCGCTATGTTCTAAGTGGCAAAGCTTGGGATAATCTTCTGGAGAACAAGACTGCTTTCACAACAAAGAAAGACTATGGCAAAGAAGAGAGAGAAGCTCAGTGGGCAACTGCTCAGAGGACTCTTCATGGTCTTCAGTCACCTGACACAACCAACCTTTTCAATGACAAGAATAGCTACAGGGAGCTTTCTGAGATTGCTGAGCAAGCCAAGAGACGTGCTGAAGTTGCACGGCTTAGGGAGCTTCACACTCTAAAGGGTCATGTCGAATCAGTCGTGAAGCTTAAGGGACTTGATATCGACACTATGCAACAACATTATACTGTTTAA
Protein sequence

>Msa0493640

MGGISLEEIKNENVDLERIPVEEVFEQLKCSRAGLTSDEGANRLQVFGPNKLEEKRESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIISLLVINSTISFIEENNAGNAAAALMAGLAPKTRVLRDGRWSEEDAAILVPGDIISIKLGDIIPADARLLEGDALSVDQSALTGESLPATKNPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGILIELVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDYVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYIDSDGNWHRSSKGAPEQILNLCNCKEDVRKKAHSTIDKFAERGLRSLGVARQEIPEKDKDSPGAPWQFVGLLPLFDPPRHDSAETITRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQSKDAAVSALPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLREIFATGVVLGSYMALMTVVFFWLMKDTDFFSDKFGVRSIRKNPDEMMAALYLQVSIISQALIFVTRSRSWSFVERPGLLLLGAFMIAQLVATFIAVYANWSFARIKGMGWGWAGVIWMYSIVTYIPLDILKFVIRYVLSGKAWDNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQSPDTTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTMQQHYTV*