AlfalfaGEDB | Msa0708430

M. sativa cultivar zhongmu-4 / Msa0708430

KEGG: -
GO: -
PFAM: PF13947.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0708430	XP_013446781.1	93.115	305	16	2	1	305	1	300	0.0	561

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0708430	A0A072TVA7	93.115	305	16	2	1	305	1	300	0.0	561

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0022090	Msa0708430	0.801382	9.247124e-49	-8.615850e-47
Msa0046680	Msa0708430	-0.801342	9.421757e-49	-8.615850e-47
Msa0094840	Msa0708430	0.820559	6.433887e-53	-8.615850e-47
Msa0604890	Msa0708430	0.803208	3.890460e-49	-8.615850e-47
Msa0610850	Msa0708430	0.854814	9.580825e-62	-8.615850e-47
Msa0646180	Msa0708430	0.812666	3.779135e-51	-8.615850e-47
Msa0651340	Msa0708430	0.835877	1.298883e-56	-8.615850e-47
Msa0651490	Msa0708430	0.825388	4.816255e-54	-8.615850e-47
Msa0660180	Msa0708430	0.924033	1.207703e-89	-8.615850e-47
Msa0693560	Msa0708430	0.836093	1.144895e-56	-8.615850e-47
Msa0703640	Msa0708430	0.989056	1.648250e-176	-8.615850e-47
Msa0708430	Msa0713590	0.801497	8.756421e-49	-8.615850e-47
Msa0708430	Msa0749130	0.808497	3.009178e-50	-8.615850e-47
Msa0708430	Msa0797210	0.800300	1.537200e-48	-8.615850e-47
Msa0708430	Msa0826370	-0.807765	4.308493e-50	-8.615850e-47
Msa0708430	Msa0835070	0.801309	9.569956e-49	-8.615850e-47
Msa0708430	Msa0866960	0.841178	5.563616e-58	-8.615850e-47
Msa0708430	Msa0929460	0.933932	8.806679e-96	-8.615850e-47
Msa0708430	Msa0998900	0.814526	1.472810e-51	-8.615850e-47
Msa0708430	Msa1018210	0.870081	1.910262e-66	-8.615850e-47
Msa0708430	Msa1177360	0.808182	3.511973e-50	-8.615850e-47
Msa0708430	Msa1190460	0.826609	2.470259e-54	-8.615850e-47
Msa0708430	Msa1192790	0.807385	5.186557e-50	-8.615850e-47
Msa0708430	Msa1236740	0.831318	1.786845e-55	-8.615850e-47
Msa0708430	Msa1244300	0.801355	9.362073e-49	-8.615850e-47
Msa0708430	Msa1245210	0.805053	1.607267e-49	-8.615850e-47
Msa0708430	Msa1327400	0.809950	1.468456e-50	-8.615850e-47
Msa0708430	Msa1327420	0.810757	9.833611e-51	-8.615850e-47
Msa0708430	Msa1344870	0.816375	5.713267e-52	-8.615850e-47
Msa0708430	Msa1359880	0.812406	4.308492e-51	-8.615850e-47
Msa0148000	Msa0708430	0.811622	6.383740e-51	-8.615850e-47
Msa0148190	Msa0708430	0.800819	1.205165e-48	-8.615850e-47
Msa0187820	Msa0708430	0.835207	1.919681e-56	-8.615850e-47
Msa0379530	Msa0708430	0.807724	4.394225e-50	-8.615850e-47
Msa0433350	Msa0708430	0.843698	1.193981e-58	-8.615850e-47
Msa0447360	Msa0708430	0.809830	1.558245e-50	-8.615850e-47
Msa0451370	Msa0708430	0.807934	3.965912e-50	-8.615850e-47
Msa0466850	Msa0708430	-0.801776	7.676623e-49	-8.615850e-47
Msa0477070	Msa0708430	0.869646	2.649536e-66	-8.615850e-47
Msa0279460	Msa0708430	0.803464	3.442375e-49	-8.615850e-47
Msa0486210	Msa0708430	0.803933	2.751147e-49	-8.615850e-47
Msa0493640	Msa0708430	0.861814	7.875724e-64	-8.615850e-47
Msa0513670	Msa0708430	-0.807528	4.836695e-50	-8.615850e-47
Msa0521440	Msa0708430	0.867635	1.183533e-65	-8.615850e-47
Msa0549550	Msa0708430	0.806196	9.250497e-50	-8.615850e-47
Msa0567210	Msa0708430	0.948402	1.012721e-106	-8.615850e-47
Msa0578380	Msa0708430	0.991352	3.383133e-187	-8.615850e-47
Msa0578890	Msa0708430	0.835384	1.731964e-56	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0708430	MtrunA17_Chr8g0381971	93.056	288	15	2	1	288	1	283	0.0	529
Msa0708430	MtrunA17_Chr5g0415341	38.489	278	139	8	5	267	6	266	2.70e-53	176
Msa0708430	MtrunA17_Chr4g0058901	29.286	280	157	12	13	267	12	275	5.69e-26	104
Msa0708430	MtrunA17_Chr4g0069121	28.112	249	154	8	31	268	30	264	3.05e-22	94.4
Msa0708430	MtrunA17_Chr4g0075211	27.985	268	147	11	33	274	36	283	1.09e-21	93.6
Msa0708430	MtrunA17_Chr2g0288891	28.000	275	150	13	27	274	16	269	3.00e-19	86.3
Msa0708430	MtrunA17_Chr3g0112391	27.451	255	143	14	39	282	31	254	4.38e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0708430	AT1G10380.1	40.964	249	126	6	34	267	28	270	1.62e-45	156
Msa0708430	AT1G10380.2	40.964	249	126	6	34	267	28	270	3.50e-45	155
Msa0708430	AT3G17350.2	29.304	273	162	10	16	270	12	271	4.84e-22	94.0
Msa0708430	AT1G11915.1	29.682	283	152	13	7	260	1	265	9.68e-22	94.0
Msa0708430	AT3G17350.1	29.167	264	157	9	16	262	12	262	1.06e-20	90.5
Msa0708430	AT5G50290.1	28.000	275	161	12	18	267	4	266	1.71e-20	90.1

Find 112 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATCCTACTCATTGGGTTTA+TGG	0.115730	4_4:-81981633	Msa0708430:CDS
TGAAAGTGGATGAAGATATT+TGG	0.257191	4_4:+81981892	None:intergenic
TTGGCACAGGTCCTGGTTGC+GGG	0.266168	4_4:-81982115	Msa0708430:CDS
GTGTATGAAATGGAGGTTAT+AGG	0.283646	4_4:+81982008	None:intergenic
TGCGTCAAAGCTTCCACTTT+TGG	0.298303	4_4:-81980547	Msa0708430:three_prime_UTR
CTCACAACTAGTACATTTAG+TGG	0.331784	4_4:+81981566	None:intergenic
ATCAAAACCAAGATTTCCTT+TGG	0.338876	4_4:-81981446	Msa0708430:CDS
TTTGATGTGCATGTTATGTA+TGG	0.363083	4_4:+81982077	None:intergenic
GTTAAATCAATGCCAAAGTT+TGG	0.363622	4_4:+81981924	None:intergenic
TACATAACATGCACATCAAA+TGG	0.388250	4_4:-81982074	Msa0708430:CDS
CGGGGAACCTAGACGGCAAA+GGG	0.391013	4_4:-81981725	Msa0708430:CDS
TTTGGCACAGGTCCTGGTTG+CGG	0.395015	4_4:-81982116	Msa0708430:CDS
ACACAAACAAATCCACTTCC+TGG	0.398611	4_4:+81981513	None:intergenic
TCAACTCCCCTTTGCCGTCT+AGG	0.402495	4_4:+81981718	None:intergenic
TAGAGTCCCAAAGGAAATCT+TGG	0.407259	4_4:+81981439	None:intergenic
TATCCCTTTGGCACAGGTCC+TGG	0.410285	4_4:-81982122	Msa0708430:CDS
GGCAGTCAGTGCACAAAGCT+CGG	0.415721	4_4:-81980683	Msa0708430:three_prime_UTR
GATCGTAATTAGAGCAATCA+AGG	0.418096	4_4:+81981466	None:intergenic
CCCTACTGATCCTACTCATT+GGG	0.420444	4_4:-81981640	Msa0708430:CDS
GCTCGGGCATACGCAGGGTC+TGG	0.421720	4_4:-81980666	Msa0708430:three_prime_UTR
GTTATGTATGGGTTGAATAG+TGG	0.421768	4_4:+81982089	None:intergenic
GAATGTCTGGAGTTCCATCT+TGG	0.421862	4_4:-81980957	Msa0708430:CDS
TGTATGAAATGGAGGTTATA+GGG	0.425846	4_4:+81982009	None:intergenic
TGTTGTTGAGGCTGTGGGTG+TGG	0.432596	4_4:+81982187	None:intergenic
TATACACAACATGTGTTAGT+AGG	0.444066	4_4:+81981753	None:intergenic
TATGAACAGTTGGGAATGTC+TGG	0.453180	4_4:-81980970	Msa0708430:intron
ACCCTACTGATCCTACTCAT+TGG	0.456155	4_4:-81981641	Msa0708430:CDS
TTTGTTTGTGTTTGTAAAGG+TGG	0.459550	4_4:-81981501	Msa0708430:CDS
AATGGAGGTTATAGGGTATG+AGG	0.466527	4_4:+81982016	None:intergenic
TCAAAACCAAGATTTCCTTT+GGG	0.473584	4_4:-81981445	Msa0708430:CDS
AGATAACAATACACCAAAAG+TGG	0.476574	4_4:+81980534	None:intergenic
TGTTAGTGTTGTTGAGGCTG+TGG	0.477766	4_4:+81982181	None:intergenic
GTCTGGAGTTCCATCTTGGC+TGG	0.482605	4_4:-81980953	Msa0708430:CDS
CACAAAGCTCGGGCATACGC+AGG	0.489024	4_4:-81980672	Msa0708430:three_prime_UTR
ATGCAAACGTCACCAAACTT+TGG	0.492190	4_4:-81981936	Msa0708430:CDS
ATACAAGTCAAGTATCCCTT+TGG	0.494214	4_4:-81982134	Msa0708430:CDS
GCAGTCAGTGCACAAAGCTC+GGG	0.496072	4_4:-81980682	Msa0708430:three_prime_UTR
CCGGGGAACCTAGACGGCAA+AGG	0.496288	4_4:-81981726	Msa0708430:CDS
GTTGTGTACAATACATCAAA+TGG	0.496946	4_4:+81980632	None:intergenic
CACATGTTGTGTATACTCAC+CGG	0.497181	4_4:-81981745	Msa0708430:CDS
ATCAAAAGAAGTGTCACAAA+TGG	0.498238	4_4:+81981839	None:intergenic
CCTTTGCCGTCTAGGTTCCC+CGG	0.498477	4_4:+81981726	None:intergenic
TATTCAACATCAATATGTAA+TGG	0.500190	4_4:+81980477	None:intergenic
GTGGAAAGAGGTGGTAGTAG+TGG	0.501478	4_4:+81982245	None:intergenic
TGTGAGTGTGAGAGTGGAAG+TGG	0.506008	4_4:+81981986	None:intergenic
CTAAGATGAGAATCATGAAA+AGG	0.513752	4_4:+81982213	None:intergenic
GGGTGGTGTGAGTGTGAGAG+TGG	0.515614	4_4:+81981980	None:intergenic
TAATCGGATGATAATGCTGC+TGG	0.516924	4_4:-81980911	Msa0708430:three_prime_UTR
TACACTAGACTAGACTTCAT+AGG	0.517749	4_4:+81980758	None:intergenic
GTTAGTGTTGTTGAGGCTGT+GGG	0.518223	4_4:+81982182	None:intergenic
TATACTTCGGTTGTGTCACT+TGG	0.519729	4_4:-81981669	Msa0708430:CDS
AGTGGAAGTGGTGTATGAAA+TGG	0.521135	4_4:+81981998	None:intergenic
GAAAATGATACCAGCCAAGA+TGG	0.521207	4_4:+81980943	None:intergenic
GGATATGCTCCTCCAGGAAG+TGG	0.522288	4_4:-81981525	Msa0708430:CDS
AATAGTGGGGACCCGCAACC+AGG	0.526866	4_4:+81982104	None:intergenic
AGTAGTGGTGGTAGTGCCAT+TGG	0.534426	4_4:+81982260	None:intergenic
GGATTTGTTTGTGTTTGTAA+AGG	0.540887	4_4:-81981504	Msa0708430:CDS
GCAACCAGGACCTGTGCCAA+AGG	0.541377	4_4:+81982118	None:intergenic
AAGTGGAAGCTTTGACGCAA+AGG	0.544197	4_4:+81980551	None:intergenic
GCAAGAGAGGAGGATGAAAG+TGG	0.545372	4_4:+81981878	None:intergenic
GTCAAGTATCCCTTTGGCAC+AGG	0.545996	4_4:-81982128	Msa0708430:CDS
ACATGTTGTGTATACTCACC+GGG	0.550531	4_4:-81981744	Msa0708430:CDS
ACCCAATGAGTAGGATCAGT+AGG	0.552236	4_4:+81981639	None:intergenic
TGCCCTCAAGTAGTCTCACT+TGG	0.552797	4_4:-81981792	Msa0708430:CDS
GAGAGTAGTGGTGGTGTATG+TGG	0.555000	4_4:-81981546	Msa0708430:CDS
TACTCATTGGGTTTATGGAG+TGG	0.555908	4_4:-81981628	Msa0708430:CDS
CATGAAAAGGTTGATGAGGG+TGG	0.559660	4_4:+81982226	None:intergenic
CAACCAGGACCTGTGCCAAA+GGG	0.563262	4_4:+81982119	None:intergenic
TTGATGTGCATGTTATGTAT+GGG	0.566236	4_4:+81982078	None:intergenic
TAGACTAGACTTCATAGGAA+TGG	0.567381	4_4:+81980763	None:intergenic
TTATGTATGGGTTGAATAGT+GGG	0.567840	4_4:+81982090	None:intergenic
CATTATCATCCGATTACACT+AGG	0.569260	4_4:+81980918	None:intergenic
GGAAGTGGTGTATGAAATGG+AGG	0.572115	4_4:+81982001	None:intergenic
AAAGTTTGGTGACGTTTGCA+TGG	0.574117	4_4:+81981938	None:intergenic
GAAAGAGGTGGTAGTAGTGG+TGG	0.574477	4_4:+81982248	None:intergenic
CCCAATGAGTAGGATCAGTA+GGG	0.577746	4_4:+81981640	None:intergenic
GTATGTGGATATGCTCCTCC+AGG	0.583052	4_4:-81981531	Msa0708430:CDS
GAGGAGAGATAGAGTCCCAA+AGG	0.583741	4_4:+81981430	None:intergenic
TGATTGTAGTGGTTATACTT+CGG	0.584725	4_4:-81981682	Msa0708430:CDS
GGTGGTGCAAGTAGACATGT+AGG	0.584778	4_4:+81981959	None:intergenic
AGGTTGATGAGGGTGGAAAG+AGG	0.585956	4_4:+81982233	None:intergenic
GCACACTGTTAGTGTTGTTG+AGG	0.594642	4_4:+81982175	None:intergenic
TACCAAGTGAGACTACTTGA+GGG	0.596440	4_4:+81981790	None:intergenic
ATACCAAGTGAGACTACTTG+AGG	0.598463	4_4:+81981789	None:intergenic
GGCATACGCAGGGTCTGGAA+AGG	0.609211	4_4:-81980661	Msa0708430:three_prime_UTR
CTTAGAGAGAATGATTGTAG+TGG	0.610496	4_4:-81981693	Msa0708430:CDS
GTGGATGAAGATATTTGGAA+TGG	0.613981	4_4:+81981897	None:intergenic
TACTCACCGGGGAACCTAGA+CGG	0.615280	4_4:-81981732	Msa0708430:CDS
AACATACTGTTGTACATGGG+AGG	0.621855	4_4:+81981408	None:intergenic
ACTCCATAAACCCAATGAGT+AGG	0.626290	4_4:+81981630	None:intergenic
ACAAAGCTCGGGCATACGCA+GGG	0.627608	4_4:-81980671	Msa0708430:three_prime_UTR
GAATCATGAAAAGGTTGATG+AGG	0.631423	4_4:+81982222	None:intergenic
CTAACAGTTAAGTCATTCAG+AGG	0.631884	4_4:-81980870	Msa0708430:three_prime_UTR
TTGATGAGGGTGGAAAGAGG+TGG	0.635922	4_4:+81982236	None:intergenic
ATACTGTTGTACATGGGAGG+AGG	0.638228	4_4:+81981411	None:intergenic
AATCATGAAAAGGTTGATGA+GGG	0.650509	4_4:+81982223	None:intergenic
AAGAGTAAAGAGAAGCACAA+AGG	0.652408	4_4:+81981814	None:intergenic
TGGAACACAAGCAAAGCCAA+TGG	0.663304	4_4:-81982276	Msa0708430:exon
GTTTGGTGACGTTTGCATGG+TGG	0.670403	4_4:+81981941	None:intergenic
GTGGCATTGAAATATACTCA+TGG	0.674830	4_4:-81981609	Msa0708430:CDS
GTATTGAGCCACATGTGTCA+TGG	0.676021	4_4:+81982153	None:intergenic
AATCGGATGATAATGCTGCT+GGG	0.679814	4_4:-81980910	Msa0708430:three_prime_UTR
ACAGTTAAGTCATTCAGAGG+AGG	0.686509	4_4:-81980867	Msa0708430:three_prime_UTR
GGGGAACCTAGACGGCAAAG+GGG	0.692978	4_4:-81981724	Msa0708430:CDS
GTGGTGCAAGTAGACATGTA+GGG	0.696710	4_4:+81981960	None:intergenic
ACTAGTTGTGAGAGTAGTGG+TGG	0.700797	4_4:-81981555	Msa0708430:CDS
TGTACTAGTTGTGAGAGTAG+TGG	0.707622	4_4:-81981558	Msa0708430:CDS
TATGTATGGGTTGAATAGTG+GGG	0.729462	4_4:+81982091	None:intergenic
GTGCAAGTAGACATGTAGGG+TGG	0.743146	4_4:+81981963	None:intergenic
CATGTTGTGTATACTCACCG+GGG	0.745636	4_4:-81981743	Msa0708430:CDS
ACAGTGTGCCATGACACATG+TGG	0.759996	4_4:-81982161	Msa0708430:CDS
CAAACAAATCCACTTCCTGG+AGG	0.785898	4_4:+81981516	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATATATAAGTAAGTAATT+AGG	-	chr4_4:81981457-81981476	Msa0708430:CDS	10.0%
!!	TATATATAAGTAAGTAATTA+GGG	-	chr4_4:81981458-81981477	Msa0708430:CDS	10.0%
!!	TTATATATAAGTAAGTAATT+AGG	-	chr4_4:81981457-81981476	Msa0708430:CDS	10.0%
!!	TATATATAAGTAAGTAATTA+GGG	-	chr4_4:81981458-81981477	Msa0708430:CDS	10.0%
!!	ATATATAAGTAAGTAATTAG+GGG	-	chr4_4:81981459-81981478	Msa0708430:CDS	15.0%
!!	TGTATTGTCAAAAAAATAAA+AGG	-	chr4_4:81982029-81982048	Msa0708430:CDS	15.0%
!!	GTATTGTCAAAAAAATAAAA+GGG	-	chr4_4:81982030-81982049	Msa0708430:CDS	15.0%
!!	TAACAAAAAAAACTATCTTT+AGG	-	chr4_4:81982278-81982297	Msa0708430:exon	15.0%
!!	ATATATAAGTAAGTAATTAG+GGG	-	chr4_4:81981459-81981478	Msa0708430:CDS	15.0%
!!	TGTATTGTCAAAAAAATAAA+AGG	-	chr4_4:81982029-81982048	Msa0708430:CDS	15.0%
!!	GTATTGTCAAAAAAATAAAA+GGG	-	chr4_4:81982030-81982049	Msa0708430:CDS	15.0%
!!	TTAAAAAAACCCGAAAAAAT+GGG	+	chr4_4:81981416-81981435	None:intergenic	20.0%
!!	ATTAAAAAAACCCGAAAAAA+TGG	+	chr4_4:81981417-81981436	None:intergenic	20.0%
!!!	GGTTTTTTTAATTTTCATAC+AGG	-	chr4_4:81981425-81981444	Msa0708430:CDS	20.0%
!!	AAAGTACATTCAAAGAAAAA+TGG	-	chr4_4:81981930-81981949	Msa0708430:CDS	20.0%
!!!	TTTTTTTTTTTGTACAAGTC+TGG	-	chr4_4:81982006-81982025	Msa0708430:CDS	20.0%
!!	TATTCAACATCAATATGTAA+TGG	+	chr4_4:81982260-81982279	None:intergenic	20.0%
!!	TTAAAAAAACCCGAAAAAAT+GGG	+	chr4_4:81981416-81981435	None:intergenic	20.0%
!!	ATTAAAAAAACCCGAAAAAA+TGG	+	chr4_4:81981417-81981436	None:intergenic	20.0%
!!!	GGTTTTTTTAATTTTCATAC+AGG	-	chr4_4:81981425-81981444	Msa0708430:CDS	20.0%
!!	AAAGTACATTCAAAGAAAAA+TGG	-	chr4_4:81981930-81981949	Msa0708430:CDS	20.0%
!!!	TTTTTTTTTTTGTACAAGTC+TGG	-	chr4_4:81982006-81982025	Msa0708430:CDS	20.0%
!!	TATTCAACATCAATATGTAA+TGG	+	chr4_4:81982260-81982279	None:intergenic	20.0%
!!!	AAATGGTTGAACTTTTTTCT+TGG	+	chr4_4:81980881-81980900	None:intergenic	25.0%
!	AAAAACATACTGTTGTACAT+GGG	+	chr4_4:81981332-81981351	None:intergenic	25.0%
!	AAAGAAACAACAAAAAGAGA+AGG	+	chr4_4:81981355-81981374	None:intergenic	25.0%
!!!	TTTTACATTCCCCATTTTTT+CGG	-	chr4_4:81981403-81981422	Msa0708430:intron	25.0%
!	TAAAAAAACCCGAAAAAATG+GGG	+	chr4_4:81981415-81981434	None:intergenic	25.0%
!!	ATTTTCTGAGTACAAGAAAA+AGG	-	chr4_4:81981538-81981557	Msa0708430:CDS	25.0%
!	CAAGAAAAAGGAAAAATAGA+TGG	-	chr4_4:81981550-81981569	Msa0708430:CDS	25.0%
!	AAAAAGGAAAAATAGATGGT+TGG	-	chr4_4:81981554-81981573	Msa0708430:CDS	25.0%
!	AAAACAATATGCCAAAGTAA+TGG	-	chr4_4:81981619-81981638	Msa0708430:CDS	25.0%
!	AAACAATATGCCAAAGTAAT+GGG	-	chr4_4:81981620-81981639	Msa0708430:CDS	25.0%
!	ATAATAGTTACCCATTACTT+TGG	+	chr4_4:81981633-81981652	None:intergenic	25.0%
!	TATTATTCTGTACACTTGAA+AGG	-	chr4_4:81981647-81981666	Msa0708430:CDS	25.0%
!!!	TTTATATTGATTCTCTCTCT+TGG	-	chr4_4:81981693-81981712	Msa0708430:CDS	25.0%
!!	TAACTTTTGTGCATTAAAGA+AGG	+	chr4_4:81981903-81981922	None:intergenic	25.0%
!!	TCTTTGAATGTACTTTTCTA+AGG	+	chr4_4:81981926-81981945	None:intergenic	25.0%
!	CTCTGTAAAAAAAAATTGCA+TGG	-	chr4_4:81982221-81982240	Msa0708430:CDS	25.0%
!!!	AAATGGTTGAACTTTTTTCT+TGG	+	chr4_4:81980881-81980900	None:intergenic	25.0%
!	AAAAACATACTGTTGTACAT+GGG	+	chr4_4:81981332-81981351	None:intergenic	25.0%
!	AAAGAAACAACAAAAAGAGA+AGG	+	chr4_4:81981355-81981374	None:intergenic	25.0%
!!!	TTTTACATTCCCCATTTTTT+CGG	-	chr4_4:81981403-81981422	Msa0708430:intron	25.0%
!	TAAAAAAACCCGAAAAAATG+GGG	+	chr4_4:81981415-81981434	None:intergenic	25.0%
!!	ATTTTCTGAGTACAAGAAAA+AGG	-	chr4_4:81981538-81981557	Msa0708430:CDS	25.0%
!	CAAGAAAAAGGAAAAATAGA+TGG	-	chr4_4:81981550-81981569	Msa0708430:CDS	25.0%
!	AAAAAGGAAAAATAGATGGT+TGG	-	chr4_4:81981554-81981573	Msa0708430:CDS	25.0%
!	AAAACAATATGCCAAAGTAA+TGG	-	chr4_4:81981619-81981638	Msa0708430:CDS	25.0%
!	AAACAATATGCCAAAGTAAT+GGG	-	chr4_4:81981620-81981639	Msa0708430:CDS	25.0%
!	ATAATAGTTACCCATTACTT+TGG	+	chr4_4:81981633-81981652	None:intergenic	25.0%
!	TATTATTCTGTACACTTGAA+AGG	-	chr4_4:81981647-81981666	Msa0708430:CDS	25.0%
!!!	TTTATATTGATTCTCTCTCT+TGG	-	chr4_4:81981693-81981712	Msa0708430:CDS	25.0%
!!	TAACTTTTGTGCATTAAAGA+AGG	+	chr4_4:81981903-81981922	None:intergenic	25.0%
!!	TCTTTGAATGTACTTTTCTA+AGG	+	chr4_4:81981926-81981945	None:intergenic	25.0%
!	CTCTGTAAAAAAAAATTGCA+TGG	-	chr4_4:81982221-81982240	Msa0708430:CDS	25.0%
!!	AATCATGAAAAGGTTGATGA+GGG	+	chr4_4:81980514-81980533	None:intergenic	30.0%
	CTAAGATGAGAATCATGAAA+AGG	+	chr4_4:81980524-81980543	None:intergenic	30.0%
!	TTATGTATGGGTTGAATAGT+GGG	+	chr4_4:81980647-81980666	None:intergenic	30.0%
	TTGATGTGCATGTTATGTAT+GGG	+	chr4_4:81980659-81980678	None:intergenic	30.0%
	TTTGATGTGCATGTTATGTA+TGG	+	chr4_4:81980660-81980679	None:intergenic	30.0%
	TACATAACATGCACATCAAA+TGG	-	chr4_4:81980660-81980679	Msa0708430:three_prime_UTR	30.0%
	TGTATGAAATGGAGGTTATA+GGG	+	chr4_4:81980728-81980747	None:intergenic	30.0%
	GTTAAATCAATGCCAAAGTT+TGG	+	chr4_4:81980813-81980832	None:intergenic	30.0%
	TGAAAGTGGATGAAGATATT+TGG	+	chr4_4:81980845-81980864	None:intergenic	30.0%
!!	ATCAAAAGAAGTGTCACAAA+TGG	+	chr4_4:81980898-81980917	None:intergenic	30.0%
	TATACACAACATGTGTTAGT+AGG	+	chr4_4:81980984-81981003	None:intergenic	30.0%
	TGATTGTAGTGGTTATACTT+CGG	-	chr4_4:81981052-81981071	Msa0708430:intron	30.0%
!	GGATTTGTTTGTGTTTGTAA+AGG	-	chr4_4:81981230-81981249	Msa0708430:intron	30.0%
	TTTGTTTGTGTTTGTAAAGG+TGG	-	chr4_4:81981233-81981252	Msa0708430:intron	30.0%
	ATCAAAACCAAGATTTCCTT+TGG	-	chr4_4:81981288-81981307	Msa0708430:intron	30.0%
	TCAAAACCAAGATTTCCTTT+GGG	-	chr4_4:81981289-81981308	Msa0708430:intron	30.0%
	GAAAAACATACTGTTGTACA+TGG	+	chr4_4:81981333-81981352	None:intergenic	30.0%
!!!	TTTACATTCCCCATTTTTTC+GGG	-	chr4_4:81981404-81981423	Msa0708430:intron	30.0%
	GAAATGAGTCAAATGACTAT+TGG	-	chr4_4:81981481-81981500	Msa0708430:CDS	30.0%
	GTTGTGTACAATACATCAAA+TGG	+	chr4_4:81982105-81982124	None:intergenic	30.0%
!!!	CACAACTTTACCTTGTTTTT+AGG	-	chr4_4:81982119-81982138	Msa0708430:CDS	30.0%
	AGATAACAATACACCAAAAG+TGG	+	chr4_4:81982203-81982222	None:intergenic	30.0%
!!	AATCATGAAAAGGTTGATGA+GGG	+	chr4_4:81980514-81980533	None:intergenic	30.0%
	CTAAGATGAGAATCATGAAA+AGG	+	chr4_4:81980524-81980543	None:intergenic	30.0%
!	TTATGTATGGGTTGAATAGT+GGG	+	chr4_4:81980647-81980666	None:intergenic	30.0%
	TTGATGTGCATGTTATGTAT+GGG	+	chr4_4:81980659-81980678	None:intergenic	30.0%
	TTTGATGTGCATGTTATGTA+TGG	+	chr4_4:81980660-81980679	None:intergenic	30.0%
	TACATAACATGCACATCAAA+TGG	-	chr4_4:81980660-81980679	Msa0708430:three_prime_UTR	30.0%
	TGTATGAAATGGAGGTTATA+GGG	+	chr4_4:81980728-81980747	None:intergenic	30.0%
	GTTAAATCAATGCCAAAGTT+TGG	+	chr4_4:81980813-81980832	None:intergenic	30.0%
	TGAAAGTGGATGAAGATATT+TGG	+	chr4_4:81980845-81980864	None:intergenic	30.0%
!!	ATCAAAAGAAGTGTCACAAA+TGG	+	chr4_4:81980898-81980917	None:intergenic	30.0%
	TATACACAACATGTGTTAGT+AGG	+	chr4_4:81980984-81981003	None:intergenic	30.0%
	TGATTGTAGTGGTTATACTT+CGG	-	chr4_4:81981052-81981071	Msa0708430:intron	30.0%
!	GGATTTGTTTGTGTTTGTAA+AGG	-	chr4_4:81981230-81981249	Msa0708430:intron	30.0%
	TTTGTTTGTGTTTGTAAAGG+TGG	-	chr4_4:81981233-81981252	Msa0708430:intron	30.0%
	ATCAAAACCAAGATTTCCTT+TGG	-	chr4_4:81981288-81981307	Msa0708430:intron	30.0%
	TCAAAACCAAGATTTCCTTT+GGG	-	chr4_4:81981289-81981308	Msa0708430:intron	30.0%
	GAAAAACATACTGTTGTACA+TGG	+	chr4_4:81981333-81981352	None:intergenic	30.0%
!!!	TTTACATTCCCCATTTTTTC+GGG	-	chr4_4:81981404-81981423	Msa0708430:intron	30.0%
	GAAATGAGTCAAATGACTAT+TGG	-	chr4_4:81981481-81981500	Msa0708430:CDS	30.0%
	GTTGTGTACAATACATCAAA+TGG	+	chr4_4:81982105-81982124	None:intergenic	30.0%
!!!	CACAACTTTACCTTGTTTTT+AGG	-	chr4_4:81982119-81982138	Msa0708430:CDS	30.0%
	AGATAACAATACACCAAAAG+TGG	+	chr4_4:81982203-81982222	None:intergenic	30.0%
!!	GAATCATGAAAAGGTTGATG+AGG	+	chr4_4:81980515-81980534	None:intergenic	35.0%
	ATACAAGTCAAGTATCCCTT+TGG	-	chr4_4:81980600-81980619	Msa0708430:three_prime_UTR	35.0%
!	TATGTATGGGTTGAATAGTG+GGG	+	chr4_4:81980646-81980665	None:intergenic	35.0%
!	GTTATGTATGGGTTGAATAG+TGG	+	chr4_4:81980648-81980667	None:intergenic	35.0%
	GTGTATGAAATGGAGGTTAT+AGG	+	chr4_4:81980729-81980748	None:intergenic	35.0%
	GTGGATGAAGATATTTGGAA+TGG	+	chr4_4:81980840-81980859	None:intergenic	35.0%
!!!	AACTTTTTTCTTGGCAAGAG+AGG	+	chr4_4:81980872-81980891	None:intergenic	35.0%
!	AAGAGTAAAGAGAAGCACAA+AGG	+	chr4_4:81980923-81980942	None:intergenic	35.0%
	GTGTTAGTAGGAGAAAAAAG+AGG	+	chr4_4:81980972-81980991	None:intergenic	35.0%
	CTTAGAGAGAATGATTGTAG+TGG	-	chr4_4:81981041-81981060	Msa0708430:intron	35.0%
!	GTGGCATTGAAATATACTCA+TGG	-	chr4_4:81981125-81981144	Msa0708430:intron	35.0%
	CTCACAACTAGTACATTTAG+TGG	+	chr4_4:81981171-81981190	None:intergenic	35.0%
	GATCGTAATTAGAGCAATCA+AGG	+	chr4_4:81981271-81981290	None:intergenic	35.0%
	AAAAATAGATGGTTGGACGA+TGG	-	chr4_4:81981561-81981580	Msa0708430:CDS	35.0%
	CTGTTCTGTTATGAACAGTT+GGG	-	chr4_4:81981755-81981774	Msa0708430:CDS	35.0%
!	CATTTTCAGCCTAGTGTAAT+CGG	-	chr4_4:81981807-81981826	Msa0708430:CDS	35.0%
	CATTATCATCCGATTACACT+AGG	+	chr4_4:81981819-81981838	None:intergenic	35.0%
	CTAACAGTTAAGTCATTCAG+AGG	-	chr4_4:81981864-81981883	Msa0708430:CDS	35.0%
	TAGACTAGACTTCATAGGAA+TGG	+	chr4_4:81981974-81981993	None:intergenic	35.0%
	TACACTAGACTAGACTTCAT+AGG	+	chr4_4:81981979-81981998	None:intergenic	35.0%
	CAGTCTCTTACCTAAAAACA+AGG	+	chr4_4:81982132-81982151	None:intergenic	35.0%
!!	GAATCATGAAAAGGTTGATG+AGG	+	chr4_4:81980515-81980534	None:intergenic	35.0%
	ATACAAGTCAAGTATCCCTT+TGG	-	chr4_4:81980600-81980619	Msa0708430:three_prime_UTR	35.0%
!	TATGTATGGGTTGAATAGTG+GGG	+	chr4_4:81980646-81980665	None:intergenic	35.0%
!	GTTATGTATGGGTTGAATAG+TGG	+	chr4_4:81980648-81980667	None:intergenic	35.0%
	GTGTATGAAATGGAGGTTAT+AGG	+	chr4_4:81980729-81980748	None:intergenic	35.0%
	GTGGATGAAGATATTTGGAA+TGG	+	chr4_4:81980840-81980859	None:intergenic	35.0%
!!!	AACTTTTTTCTTGGCAAGAG+AGG	+	chr4_4:81980872-81980891	None:intergenic	35.0%
!	AAGAGTAAAGAGAAGCACAA+AGG	+	chr4_4:81980923-81980942	None:intergenic	35.0%
	GTGTTAGTAGGAGAAAAAAG+AGG	+	chr4_4:81980972-81980991	None:intergenic	35.0%
	CTTAGAGAGAATGATTGTAG+TGG	-	chr4_4:81981041-81981060	Msa0708430:intron	35.0%
!	GTGGCATTGAAATATACTCA+TGG	-	chr4_4:81981125-81981144	Msa0708430:intron	35.0%
	CTCACAACTAGTACATTTAG+TGG	+	chr4_4:81981171-81981190	None:intergenic	35.0%
	GATCGTAATTAGAGCAATCA+AGG	+	chr4_4:81981271-81981290	None:intergenic	35.0%
	AAAAATAGATGGTTGGACGA+TGG	-	chr4_4:81981561-81981580	Msa0708430:CDS	35.0%
	CTGTTCTGTTATGAACAGTT+GGG	-	chr4_4:81981755-81981774	Msa0708430:CDS	35.0%
!	CATTTTCAGCCTAGTGTAAT+CGG	-	chr4_4:81981807-81981826	Msa0708430:CDS	35.0%
	CATTATCATCCGATTACACT+AGG	+	chr4_4:81981819-81981838	None:intergenic	35.0%
	CTAACAGTTAAGTCATTCAG+AGG	-	chr4_4:81981864-81981883	Msa0708430:CDS	35.0%
	TAGACTAGACTTCATAGGAA+TGG	+	chr4_4:81981974-81981993	None:intergenic	35.0%
	TACACTAGACTAGACTTCAT+AGG	+	chr4_4:81981979-81981998	None:intergenic	35.0%
	CAGTCTCTTACCTAAAAACA+AGG	+	chr4_4:81982132-81982151	None:intergenic	35.0%
!!!	TGTGAGTTTTGAGGATGAGT+TGG	+	chr4_4:81980695-81980714	None:intergenic	40.0%
!	ATGAGGATGTGTGAGTTTTG+AGG	+	chr4_4:81980704-81980723	None:intergenic	40.0%
	AATGGAGGTTATAGGGTATG+AGG	+	chr4_4:81980721-81980740	None:intergenic	40.0%
	AGTGGAAGTGGTGTATGAAA+TGG	+	chr4_4:81980739-81980758	None:intergenic	40.0%
!!	AAAGTTTGGTGACGTTTGCA+TGG	+	chr4_4:81980799-81980818	None:intergenic	40.0%
	ATGCAAACGTCACCAAACTT+TGG	-	chr4_4:81980798-81980817	Msa0708430:three_prime_UTR	40.0%
!!!	TTTTTTCTTGGCAAGAGAGG+AGG	+	chr4_4:81980869-81980888	None:intergenic	40.0%
	TACCAAGTGAGACTACTTGA+GGG	+	chr4_4:81980947-81980966	None:intergenic	40.0%
	ATACCAAGTGAGACTACTTG+AGG	+	chr4_4:81980948-81980967	None:intergenic	40.0%
	CACATGTTGTGTATACTCAC+CGG	-	chr4_4:81980989-81981008	Msa0708430:intron	40.0%
	ACATGTTGTGTATACTCACC+GGG	-	chr4_4:81980990-81981009	Msa0708430:intron	40.0%
!	TATACTTCGGTTGTGTCACT+TGG	-	chr4_4:81981065-81981084	Msa0708430:intron	40.0%
	GATCCTACTCATTGGGTTTA+TGG	-	chr4_4:81981101-81981120	Msa0708430:intron	40.0%
	ACTCCATAAACCCAATGAGT+AGG	+	chr4_4:81981107-81981126	None:intergenic	40.0%
	TACTCATTGGGTTTATGGAG+TGG	-	chr4_4:81981106-81981125	Msa0708430:intron	40.0%
	TGTACTAGTTGTGAGAGTAG+TGG	-	chr4_4:81981176-81981195	Msa0708430:intron	40.0%
	ACACAAACAAATCCACTTCC+TGG	+	chr4_4:81981224-81981243	None:intergenic	40.0%
	TAGAGTCCCAAAGGAAATCT+TGG	+	chr4_4:81981298-81981317	None:intergenic	40.0%
	AACATACTGTTGTACATGGG+AGG	+	chr4_4:81981329-81981348	None:intergenic	40.0%
	CCAACTGTTCATAACAGAAC+AGG	+	chr4_4:81981757-81981776	None:intergenic	40.0%
	CCTGTTCTGTTATGAACAGT+TGG	-	chr4_4:81981754-81981773	Msa0708430:CDS	40.0%
	TATGAACAGTTGGGAATGTC+TGG	-	chr4_4:81981764-81981783	Msa0708430:CDS	40.0%
	GAAAATGATACCAGCCAAGA+TGG	+	chr4_4:81981794-81981813	None:intergenic	40.0%
!	TAATCGGATGATAATGCTGC+TGG	-	chr4_4:81981823-81981842	Msa0708430:CDS	40.0%
!	AATCGGATGATAATGCTGCT+GGG	-	chr4_4:81981824-81981843	Msa0708430:CDS	40.0%
	ACAGTTAAGTCATTCAGAGG+AGG	-	chr4_4:81981867-81981886	Msa0708430:CDS	40.0%
!!!	TGTGAGTTTTGAGGATGAGT+TGG	+	chr4_4:81980695-81980714	None:intergenic	40.0%
!	ATGAGGATGTGTGAGTTTTG+AGG	+	chr4_4:81980704-81980723	None:intergenic	40.0%
	AATGGAGGTTATAGGGTATG+AGG	+	chr4_4:81980721-81980740	None:intergenic	40.0%
	AGTGGAAGTGGTGTATGAAA+TGG	+	chr4_4:81980739-81980758	None:intergenic	40.0%
!!	AAAGTTTGGTGACGTTTGCA+TGG	+	chr4_4:81980799-81980818	None:intergenic	40.0%
	ATGCAAACGTCACCAAACTT+TGG	-	chr4_4:81980798-81980817	Msa0708430:three_prime_UTR	40.0%
!!!	TTTTTTCTTGGCAAGAGAGG+AGG	+	chr4_4:81980869-81980888	None:intergenic	40.0%
	TACCAAGTGAGACTACTTGA+GGG	+	chr4_4:81980947-81980966	None:intergenic	40.0%
	ATACCAAGTGAGACTACTTG+AGG	+	chr4_4:81980948-81980967	None:intergenic	40.0%
	CACATGTTGTGTATACTCAC+CGG	-	chr4_4:81980989-81981008	Msa0708430:intron	40.0%
	ACATGTTGTGTATACTCACC+GGG	-	chr4_4:81980990-81981009	Msa0708430:intron	40.0%
!	TATACTTCGGTTGTGTCACT+TGG	-	chr4_4:81981065-81981084	Msa0708430:intron	40.0%
	GATCCTACTCATTGGGTTTA+TGG	-	chr4_4:81981101-81981120	Msa0708430:intron	40.0%
	ACTCCATAAACCCAATGAGT+AGG	+	chr4_4:81981107-81981126	None:intergenic	40.0%
	TACTCATTGGGTTTATGGAG+TGG	-	chr4_4:81981106-81981125	Msa0708430:intron	40.0%
	TGTACTAGTTGTGAGAGTAG+TGG	-	chr4_4:81981176-81981195	Msa0708430:intron	40.0%
	ACACAAACAAATCCACTTCC+TGG	+	chr4_4:81981224-81981243	None:intergenic	40.0%
	TAGAGTCCCAAAGGAAATCT+TGG	+	chr4_4:81981298-81981317	None:intergenic	40.0%
	AACATACTGTTGTACATGGG+AGG	+	chr4_4:81981329-81981348	None:intergenic	40.0%
	CCAACTGTTCATAACAGAAC+AGG	+	chr4_4:81981757-81981776	None:intergenic	40.0%
	CCTGTTCTGTTATGAACAGT+TGG	-	chr4_4:81981754-81981773	Msa0708430:CDS	40.0%
	TATGAACAGTTGGGAATGTC+TGG	-	chr4_4:81981764-81981783	Msa0708430:CDS	40.0%
	GAAAATGATACCAGCCAAGA+TGG	+	chr4_4:81981794-81981813	None:intergenic	40.0%
!	TAATCGGATGATAATGCTGC+TGG	-	chr4_4:81981823-81981842	Msa0708430:CDS	40.0%
!	AATCGGATGATAATGCTGCT+GGG	-	chr4_4:81981824-81981843	Msa0708430:CDS	40.0%
	ACAGTTAAGTCATTCAGAGG+AGG	-	chr4_4:81981867-81981886	Msa0708430:CDS	40.0%
	TGGAACACAAGCAAAGCCAA+TGG	-	chr4_4:81980458-81980477	Msa0708430:three_prime_UTR	45.0%
!!	CATGAAAAGGTTGATGAGGG+TGG	+	chr4_4:81980511-81980530	None:intergenic	45.0%
!	GTTAGTGTTGTTGAGGCTGT+GGG	+	chr4_4:81980555-81980574	None:intergenic	45.0%
!	TGTTAGTGTTGTTGAGGCTG+TGG	+	chr4_4:81980556-81980575	None:intergenic	45.0%
!	GCACACTGTTAGTGTTGTTG+AGG	+	chr4_4:81980562-81980581	None:intergenic	45.0%
	GTATTGAGCCACATGTGTCA+TGG	+	chr4_4:81980584-81980603	None:intergenic	45.0%
	GGAAGTGGTGTATGAAATGG+AGG	+	chr4_4:81980736-81980755	None:intergenic	45.0%
	GTGGTGCAAGTAGACATGTA+GGG	+	chr4_4:81980777-81980796	None:intergenic	45.0%
	CATGTTGTGTATACTCACCG+GGG	-	chr4_4:81980991-81981010	Msa0708430:intron	45.0%
	ACCCTACTGATCCTACTCAT+TGG	-	chr4_4:81981093-81981112	Msa0708430:intron	45.0%
	CCCAATGAGTAGGATCAGTA+GGG	+	chr4_4:81981097-81981116	None:intergenic	45.0%
	CCCTACTGATCCTACTCATT+GGG	-	chr4_4:81981094-81981113	Msa0708430:intron	45.0%
	ACCCAATGAGTAGGATCAGT+AGG	+	chr4_4:81981098-81981117	None:intergenic	45.0%
	ACTAGTTGTGAGAGTAGTGG+TGG	-	chr4_4:81981179-81981198	Msa0708430:intron	45.0%
	CAAACAAATCCACTTCCTGG+AGG	+	chr4_4:81981221-81981240	None:intergenic	45.0%
	ATACTGTTGTACATGGGAGG+AGG	+	chr4_4:81981326-81981345	None:intergenic	45.0%
!	GAATGTCTGGAGTTCCATCT+TGG	-	chr4_4:81981777-81981796	Msa0708430:CDS	45.0%
!	AAGTGGAAGCTTTGACGCAA+AGG	+	chr4_4:81982186-81982205	None:intergenic	45.0%
!	TGCGTCAAAGCTTCCACTTT+TGG	-	chr4_4:81982187-81982206	Msa0708430:CDS	45.0%
	TGGAACACAAGCAAAGCCAA+TGG	-	chr4_4:81980458-81980477	Msa0708430:three_prime_UTR	45.0%
!!	CATGAAAAGGTTGATGAGGG+TGG	+	chr4_4:81980511-81980530	None:intergenic	45.0%
!	GTTAGTGTTGTTGAGGCTGT+GGG	+	chr4_4:81980555-81980574	None:intergenic	45.0%
!	TGTTAGTGTTGTTGAGGCTG+TGG	+	chr4_4:81980556-81980575	None:intergenic	45.0%
!	GCACACTGTTAGTGTTGTTG+AGG	+	chr4_4:81980562-81980581	None:intergenic	45.0%
	GTATTGAGCCACATGTGTCA+TGG	+	chr4_4:81980584-81980603	None:intergenic	45.0%
	GGAAGTGGTGTATGAAATGG+AGG	+	chr4_4:81980736-81980755	None:intergenic	45.0%
	GTGGTGCAAGTAGACATGTA+GGG	+	chr4_4:81980777-81980796	None:intergenic	45.0%
	CATGTTGTGTATACTCACCG+GGG	-	chr4_4:81980991-81981010	Msa0708430:intron	45.0%
	ACCCTACTGATCCTACTCAT+TGG	-	chr4_4:81981093-81981112	Msa0708430:intron	45.0%
	CCCAATGAGTAGGATCAGTA+GGG	+	chr4_4:81981097-81981116	None:intergenic	45.0%
	CCCTACTGATCCTACTCATT+GGG	-	chr4_4:81981094-81981113	Msa0708430:intron	45.0%
	ACCCAATGAGTAGGATCAGT+AGG	+	chr4_4:81981098-81981117	None:intergenic	45.0%
	ACTAGTTGTGAGAGTAGTGG+TGG	-	chr4_4:81981179-81981198	Msa0708430:intron	45.0%
	CAAACAAATCCACTTCCTGG+AGG	+	chr4_4:81981221-81981240	None:intergenic	45.0%
	ATACTGTTGTACATGGGAGG+AGG	+	chr4_4:81981326-81981345	None:intergenic	45.0%
!	GAATGTCTGGAGTTCCATCT+TGG	-	chr4_4:81981777-81981796	Msa0708430:CDS	45.0%
!	AAGTGGAAGCTTTGACGCAA+AGG	+	chr4_4:81982186-81982205	None:intergenic	45.0%
!	TGCGTCAAAGCTTCCACTTT+TGG	-	chr4_4:81982187-81982206	Msa0708430:CDS	45.0%
!	AGTAGTGGTGGTAGTGCCAT+TGG	+	chr4_4:81980477-81980496	None:intergenic	50.0%
	GAAAGAGGTGGTAGTAGTGG+TGG	+	chr4_4:81980489-81980508	None:intergenic	50.0%
	GTGGAAAGAGGTGGTAGTAG+TGG	+	chr4_4:81980492-81980511	None:intergenic	50.0%
	TTGATGAGGGTGGAAAGAGG+TGG	+	chr4_4:81980501-81980520	None:intergenic	50.0%
!!	AGGTTGATGAGGGTGGAAAG+AGG	+	chr4_4:81980504-81980523	None:intergenic	50.0%
	ACAGTGTGCCATGACACATG+TGG	-	chr4_4:81980573-81980592	Msa0708430:three_prime_UTR	50.0%
	GTCAAGTATCCCTTTGGCAC+AGG	-	chr4_4:81980606-81980625	Msa0708430:three_prime_UTR	50.0%
	TGTGAGTGTGAGAGTGGAAG+TGG	+	chr4_4:81980751-81980770	None:intergenic	50.0%
	GTGCAAGTAGACATGTAGGG+TGG	+	chr4_4:81980774-81980793	None:intergenic	50.0%
	GGTGGTGCAAGTAGACATGT+AGG	+	chr4_4:81980778-81980797	None:intergenic	50.0%
!!	GTTTGGTGACGTTTGCATGG+TGG	+	chr4_4:81980796-81980815	None:intergenic	50.0%
	GCAAGAGAGGAGGATGAAAG+TGG	+	chr4_4:81980859-81980878	None:intergenic	50.0%
	TGCCCTCAAGTAGTCTCACT+TGG	-	chr4_4:81980942-81980961	Msa0708430:CDS	50.0%
!	GAGAGTAGTGGTGGTGTATG+TGG	-	chr4_4:81981188-81981207	Msa0708430:intron	50.0%
	GTATGTGGATATGCTCCTCC+AGG	-	chr4_4:81981203-81981222	Msa0708430:intron	50.0%
	GAGGAGAGATAGAGTCCCAA+AGG	+	chr4_4:81981307-81981326	None:intergenic	50.0%
!	AGTAGTGGTGGTAGTGCCAT+TGG	+	chr4_4:81980477-81980496	None:intergenic	50.0%
	GAAAGAGGTGGTAGTAGTGG+TGG	+	chr4_4:81980489-81980508	None:intergenic	50.0%
	GTGGAAAGAGGTGGTAGTAG+TGG	+	chr4_4:81980492-81980511	None:intergenic	50.0%
	TTGATGAGGGTGGAAAGAGG+TGG	+	chr4_4:81980501-81980520	None:intergenic	50.0%
!!	AGGTTGATGAGGGTGGAAAG+AGG	+	chr4_4:81980504-81980523	None:intergenic	50.0%
	ACAGTGTGCCATGACACATG+TGG	-	chr4_4:81980573-81980592	Msa0708430:three_prime_UTR	50.0%
	GTCAAGTATCCCTTTGGCAC+AGG	-	chr4_4:81980606-81980625	Msa0708430:three_prime_UTR	50.0%
	TGTGAGTGTGAGAGTGGAAG+TGG	+	chr4_4:81980751-81980770	None:intergenic	50.0%
	GTGCAAGTAGACATGTAGGG+TGG	+	chr4_4:81980774-81980793	None:intergenic	50.0%
	GGTGGTGCAAGTAGACATGT+AGG	+	chr4_4:81980778-81980797	None:intergenic	50.0%
!!	GTTTGGTGACGTTTGCATGG+TGG	+	chr4_4:81980796-81980815	None:intergenic	50.0%
	GCAAGAGAGGAGGATGAAAG+TGG	+	chr4_4:81980859-81980878	None:intergenic	50.0%
	TGCCCTCAAGTAGTCTCACT+TGG	-	chr4_4:81980942-81980961	Msa0708430:CDS	50.0%
!	GAGAGTAGTGGTGGTGTATG+TGG	-	chr4_4:81981188-81981207	Msa0708430:intron	50.0%
	GTATGTGGATATGCTCCTCC+AGG	-	chr4_4:81981203-81981222	Msa0708430:intron	50.0%
	GAGGAGAGATAGAGTCCCAA+AGG	+	chr4_4:81981307-81981326	None:intergenic	50.0%
	TGTTGTTGAGGCTGTGGGTG+TGG	+	chr4_4:81980550-81980569	None:intergenic	55.0%
	TATCCCTTTGGCACAGGTCC+TGG	-	chr4_4:81980612-81980631	Msa0708430:three_prime_UTR	55.0%
	CAACCAGGACCTGTGCCAAA+GGG	+	chr4_4:81980618-81980637	None:intergenic	55.0%
	TTTGGCACAGGTCCTGGTTG+CGG	-	chr4_4:81980618-81980637	Msa0708430:three_prime_UTR	55.0%
	TACTCACCGGGGAACCTAGA+CGG	-	chr4_4:81981002-81981021	Msa0708430:intron	55.0%
	TCAACTCCCCTTTGCCGTCT+AGG	+	chr4_4:81981019-81981038	None:intergenic	55.0%
	GGATATGCTCCTCCAGGAAG+TGG	-	chr4_4:81981209-81981228	Msa0708430:intron	55.0%
!	GTCTGGAGTTCCATCTTGGC+TGG	-	chr4_4:81981781-81981800	Msa0708430:CDS	55.0%
	GGCAGTCAGTGCACAAAGCT+CGG	-	chr4_4:81982051-81982070	Msa0708430:CDS	55.0%
	GCAGTCAGTGCACAAAGCTC+GGG	-	chr4_4:81982052-81982071	Msa0708430:CDS	55.0%
	ACAAAGCTCGGGCATACGCA+GGG	-	chr4_4:81982063-81982082	Msa0708430:CDS	55.0%
	TGTTGTTGAGGCTGTGGGTG+TGG	+	chr4_4:81980550-81980569	None:intergenic	55.0%
	TATCCCTTTGGCACAGGTCC+TGG	-	chr4_4:81980612-81980631	Msa0708430:three_prime_UTR	55.0%
	CAACCAGGACCTGTGCCAAA+GGG	+	chr4_4:81980618-81980637	None:intergenic	55.0%
	TTTGGCACAGGTCCTGGTTG+CGG	-	chr4_4:81980618-81980637	Msa0708430:three_prime_UTR	55.0%
	TACTCACCGGGGAACCTAGA+CGG	-	chr4_4:81981002-81981021	Msa0708430:intron	55.0%
	TCAACTCCCCTTTGCCGTCT+AGG	+	chr4_4:81981019-81981038	None:intergenic	55.0%
	GGATATGCTCCTCCAGGAAG+TGG	-	chr4_4:81981209-81981228	Msa0708430:intron	55.0%
!	GTCTGGAGTTCCATCTTGGC+TGG	-	chr4_4:81981781-81981800	Msa0708430:CDS	55.0%
	GGCAGTCAGTGCACAAAGCT+CGG	-	chr4_4:81982051-81982070	Msa0708430:CDS	55.0%
	GCAGTCAGTGCACAAAGCTC+GGG	-	chr4_4:81982052-81982071	Msa0708430:CDS	55.0%
	ACAAAGCTCGGGCATACGCA+GGG	-	chr4_4:81982063-81982082	Msa0708430:CDS	55.0%
	GCAACCAGGACCTGTGCCAA+AGG	+	chr4_4:81980619-81980638	None:intergenic	60.0%
	TTGGCACAGGTCCTGGTTGC+GGG	-	chr4_4:81980619-81980638	Msa0708430:three_prime_UTR	60.0%
!	AATAGTGGGGACCCGCAACC+AGG	+	chr4_4:81980633-81980652	None:intergenic	60.0%
	GGGTGGTGTGAGTGTGAGAG+TGG	+	chr4_4:81980757-81980776	None:intergenic	60.0%
	CCTTTGCCGTCTAGGTTCCC+CGG	+	chr4_4:81981011-81981030	None:intergenic	60.0%
	CGGGGAACCTAGACGGCAAA+GGG	-	chr4_4:81981009-81981028	Msa0708430:intron	60.0%
	GGGGAACCTAGACGGCAAAG+GGG	-	chr4_4:81981010-81981029	Msa0708430:intron	60.0%
	CACAAAGCTCGGGCATACGC+AGG	-	chr4_4:81982062-81982081	Msa0708430:CDS	60.0%
	GGCATACGCAGGGTCTGGAA+AGG	-	chr4_4:81982073-81982092	Msa0708430:CDS	60.0%
	GCAACCAGGACCTGTGCCAA+AGG	+	chr4_4:81980619-81980638	None:intergenic	60.0%
	TTGGCACAGGTCCTGGTTGC+GGG	-	chr4_4:81980619-81980638	Msa0708430:three_prime_UTR	60.0%
!	AATAGTGGGGACCCGCAACC+AGG	+	chr4_4:81980633-81980652	None:intergenic	60.0%
	GGGTGGTGTGAGTGTGAGAG+TGG	+	chr4_4:81980757-81980776	None:intergenic	60.0%
	CCTTTGCCGTCTAGGTTCCC+CGG	+	chr4_4:81981011-81981030	None:intergenic	60.0%
	CGGGGAACCTAGACGGCAAA+GGG	-	chr4_4:81981009-81981028	Msa0708430:intron	60.0%
	GGGGAACCTAGACGGCAAAG+GGG	-	chr4_4:81981010-81981029	Msa0708430:intron	60.0%
	CACAAAGCTCGGGCATACGC+AGG	-	chr4_4:81982062-81982081	Msa0708430:CDS	60.0%
	GGCATACGCAGGGTCTGGAA+AGG	-	chr4_4:81982073-81982092	Msa0708430:CDS	60.0%
	CCGGGGAACCTAGACGGCAA+AGG	-	chr4_4:81981008-81981027	Msa0708430:intron	65.0%
	CCGGGGAACCTAGACGGCAA+AGG	-	chr4_4:81981008-81981027	Msa0708430:intron	65.0%
	GCTCGGGCATACGCAGGGTC+TGG	-	chr4_4:81982068-81982087	Msa0708430:CDS	70.0%
	GCTCGGGCATACGCAGGGTC+TGG	-	chr4_4:81982068-81982087	Msa0708430:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_4	gene	81980457	81982299	81980457	ID=Msa0708430;Name=Msa0708430
chr4_4	mRNA	81980457	81982299	81980457	ID=Msa0708430-mRNA-1;Parent=Msa0708430;Name=Msa0708430-mRNA-1;_AED=0.00;_eAED=0.00;_QI=20\|1\|1\|1\|1\|1\|2\|474\|305
chr4_4	exon	81980457	81980983	81980457	ID=Msa0708430-mRNA-1:exon:26937;Parent=Msa0708430-mRNA-1
chr4_4	exon	81981415	81982299	81981415	ID=Msa0708430-mRNA-1:exon:26936;Parent=Msa0708430-mRNA-1
chr4_4	five_prime_UTR	81982280	81982299	81982280	ID=Msa0708430-mRNA-1:five_prime_utr;Parent=Msa0708430-mRNA-1
chr4_4	CDS	81981415	81982279	81981415	ID=Msa0708430-mRNA-1:cds;Parent=Msa0708430-mRNA-1
chr4_4	CDS	81980931	81980983	81980931	ID=Msa0708430-mRNA-1:cds;Parent=Msa0708430-mRNA-1
chr4_4	three_prime_UTR	81980457	81980930	81980457	ID=Msa0708430-mRNA-1:three_prime_utr;Parent=Msa0708430-mRNA-1

Gene Sequence

>Msa0708430

ATGGCACTACCACCACTACTACCACCTCTTTCCACCCTCATCAACCTTTTCATGATTCTCATCTTAGCATCCACACCCACAGCCTCAACAACACTAACAGTGTGCCATGACACATGTGGCTCAATACAAGTCAAGTATCCCTTTGGCACAGGTCCTGGTTGCGGGTCCCCACTATTCAACCCATACATAACATGCACATCAAATGGAACAATAGACCAACTCATCCTCAAAACTCACACATCCTCATACCCTATAACCTCCATTTCATACACCACTTCCACTCTCACACTCACACCACCCTACATGTCTACTTGCACCACCATGCAAACGTCACCAAACTTTGGCATTGATTTAACTGCACCATTCCAAATATCTTCATCCACTTTCATCCTCCTCTCTTGCCAAGAAAAAAGTTCAACCATTTGTGACACTTCTTTTGATTACCTTTGTGCTTCTCTTTACTCTTGCCCTCAAGTAGTCTCACTTGGTATGCCTCTTTTTTCTCCTACTAACACATGTTGTGTATACTCACCGGGGAACCTAGACGGCAAAGGGGAGTTGAATCTTAGAGAGAATGATTGTAGTGGTTATACTTCGGTTGTGTCACTTGGTGATAACCCTACTGATCCTACTCATTGGGTTTATGGAGTGGCATTGAAATATACTCATGGTGCTTTTGATAACTTTGCAACCACTAAATGTACTAGTTGTGAGAGTAGTGGTGGTGTATGTGGATATGCTCCTCCAGGAAGTGGATTTGTTTGTGTTTGTAAAGGTGGATATAATACTAGCCTTGATTGCTCTAATTACGATCAAAACCAAGATTTCCTTTGGGACTCTATCTCTCCTCCTCCCATGTACAACATTGGGAATGTCTGGAGTTCCATCTTGGCTGGTATCATTTTCAGCCTAGTGTAA

Protein sequence

>Msa0708430

MALPPLLPPLSTLINLFMILILASTPTASTTLTVCHDTCGSIQVKYPFGTGPGCGSPLFNPYITCTSNGTIDQLILKTHTSSYPITSISYTTSTLTLTPPYMSTCTTMQTSPNFGIDLTAPFQISSSTFILLSCQEKSSTICDTSFDYLCASLYSCPQVVSLGMPLFSPTNTCCVYSPGNLDGKGELNLRENDCSGYTSVVSLGDNPTDPTHWVYGVALKYTHGAFDNFATTKCTSCESSGGVCGYAPPGSGFVCVCKGGYNTSLDCSNYDQNQDFLWDSISPPPMYNIGNVWSSILAGIIFSLV*