AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0477070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0477070 MtrunA17_Chr3g0138931 99.369 951 6 0 1 951 1 951 0.0 1941
Msa0477070 MtrunA17_Chr1g0148031 92.534 951 71 0 1 951 1 951 0.0 1789
Msa0477070 MtrunA17_Chr4g0072131 86.920 948 122 1 4 951 7 952 0.0 1702
Msa0477070 MtrunA17_Chr2g0298031 86.870 952 123 2 2 951 7 958 0.0 1680
Msa0477070 MtrunA17_Chr1g0147981 87.179 936 119 1 16 951 33 967 0.0 1652
Msa0477070 MtrunA17_Chr8g0365021 83.795 975 132 3 1 951 71 1043 0.0 1647
Msa0477070 MtrunA17_Chr2g0333721 83.949 947 152 0 5 951 3 949 0.0 1636
Msa0477070 MtrunA17_Chr4g0065481 81.924 946 167 1 6 951 7 948 0.0 1590
Msa0477070 MtrunA17_Chr4g0059961 80.967 951 176 2 5 951 9 958 0.0 1561
Msa0477070 MtrunA17_Chr6g0452721 78.759 951 197 2 5 951 7 956 0.0 1536
Msa0477070 MtrunA17_Chr2g0304941 81.506 903 163 1 4 906 5 903 0.0 1513
Msa0477070 MtrunA17_Chr8g0335291 74.819 965 226 5 2 951 4 966 0.0 1425
Msa0477070 MtrunA17_Chr7g0276551 74.719 712 175 3 240 951 6 712 0.0 1113
Msa0477070 MtrunA17_Chr7g0276541 73.279 247 54 1 7 241 14 260 1.23e-109 340
Msa0477070 MtrunA17_Chr8g0381711 24.820 693 449 16 34 672 29 703 1.10e-50 193
Msa0477070 MtrunA17_Chr1g0173111 25.211 710 444 19 34 671 132 826 9.82e-48 184
Msa0477070 MtrunA17_Chr8g0382071 25.034 731 431 24 32 671 125 829 7.17e-47 182
Msa0477070 MtrunA17_Chr4g0020551 23.262 705 450 20 32 656 64 757 9.82e-46 177
Msa0477070 MtrunA17_Chr8g0355421 25.487 718 448 20 21 660 112 820 1.16e-45 178
Msa0477070 MtrunA17_Chr5g0401211 23.944 710 440 19 43 674 145 832 2.16e-45 177
Msa0477070 MtrunA17_Chr3g0134771 25.440 739 441 24 21 674 121 834 3.58e-45 176
Msa0477070 MtrunA17_Chr4g0054021 25.554 587 366 14 135 656 165 745 3.99e-45 176
Msa0477070 MtrunA17_Chr2g0298871 25.106 709 419 21 43 656 183 874 1.97e-44 174
Msa0477070 MtrunA17_Chr7g0260401 25.535 607 369 14 133 656 245 851 2.44e-42 167
Msa0477070 MtrunA17_Chr4g0002331 24.542 709 443 21 34 656 185 887 9.41e-41 162
Msa0477070 MtrunA17_Chr6g0456201 23.387 744 468 21 9 656 81 818 6.18e-40 160
Msa0477070 MtrunA17_Chr3g0134951 31.176 340 197 10 424 731 510 844 1.03e-33 140
Msa0477070 MtrunA17_Chr3g0134951 30.172 348 204 10 34 348 23 364 5.17e-28 122
Msa0477070 MtrunA17_Chr5g0413881 72.727 77 20 1 390 465 6 82 7.09e-33 124
Msa0477070 MtrunA17_Chr5g0413881 93.333 30 2 0 660 689 83 112 4.90e-11 62.0
Msa0477070 MtrunA17_Chr8g0346461 29.282 362 216 9 21 342 19 380 2.43e-31 132
Msa0477070 MtrunA17_Chr8g0346461 28.369 423 236 13 368 732 470 883 1.58e-27 120
Msa0477070 MtrunA17_Chr7g0263361 28.032 371 219 10 21 345 31 399 1.58e-29 127
Msa0477070 MtrunA17_Chr7g0263361 34.962 266 152 7 481 730 626 886 7.30e-26 115
Msa0477070 MtrunA17_Chr1g0181471 85.246 61 9 0 454 514 29 89 1.65e-29 112
Msa0477070 MtrunA17_Chr5g0423831 68.919 74 23 0 390 463 55 128 1.66e-28 114
Msa0477070 MtrunA17_Chr6g0474841 68.919 74 23 0 390 463 55 128 1.82e-28 114
Msa0477070 MtrunA17_Chr2g0297051 23.089 615 387 15 72 656 408 966 2.00e-26 117
Msa0477070 MtrunA17_Chr8g0339181 24.319 551 333 13 143 667 430 922 5.39e-23 105
Msa0477070 MtrunA17_Chr4g0052521 22.049 576 357 14 130 667 427 948 3.08e-22 103
Msa0477070 MtrunA17_Chr4g0050431 24.869 571 333 18 126 660 366 876 8.87e-21 98.6
Msa0477070 MtrunA17_Chr8g0340261 25.899 278 183 5 402 656 93 370 8.78e-20 94.4
Msa0477070 MtrunA17_Chr4g0071991 23.574 666 388 27 63 685 106 693 9.65e-19 92.0
Msa0477070 MtrunA17_Chr8g0374391 30.846 201 104 3 480 677 34 202 1.64e-18 85.9
Msa0477070 MtrunA17_Chr2g0334231 29.004 231 138 5 137 341 274 504 1.80e-18 90.1
Msa0477070 MtrunA17_Chr8g0374331 30.348 201 105 3 480 677 41 209 2.41e-18 85.9
Msa0477070 MtrunA17_Chr2g0297871 24.453 548 332 18 155 690 62 539 1.02e-16 85.1
Msa0477070 MtrunA17_Chr8g0340271 23.636 330 214 11 43 338 122 447 2.81e-16 83.2
Msa0477070 MtrunA17_Chr3g0136331 23.252 572 350 17 153 694 363 875 7.19e-16 82.8
Msa0477070 MtrunA17_Chr5g0397621 28.191 188 102 3 480 664 692 849 6.78e-14 76.3
Msa0477070 MtrunA17_Chr2g0334221 25.957 235 152 4 391 603 100 334 2.89e-13 72.4
Msa0477070 MtrunA17_Chr1g0148011 66.667 42 13 1 860 901 71 111 1.52e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0477070 AT2G24520.2 85.985 949 133 0 3 951 46 994 0.0 1688
Msa0477070 AT2G24520.3 86.359 931 127 0 21 951 1 931 0.0 1665
Msa0477070 AT2G24520.1 86.359 931 127 0 21 951 1 931 0.0 1665
Msa0477070 AT4G30190.1 85.744 947 134 1 5 951 3 948 0.0 1637
Msa0477070 AT2G18960.1 85.412 946 138 0 6 951 4 949 0.0 1634
Msa0477070 AT2G07560.1 83.755 948 151 2 4 951 5 949 0.0 1632
Msa0477070 AT3G42640.1 84.161 947 146 2 5 951 6 948 0.0 1629
Msa0477070 AT5G57350.4 84.567 946 145 1 6 951 5 949 0.0 1623
Msa0477070 AT5G57350.2 84.567 946 145 1 6 951 5 949 0.0 1623
Msa0477070 AT5G57350.1 84.567 946 145 1 6 951 5 949 0.0 1623
Msa0477070 AT4G30190.2 82.857 980 134 2 5 951 3 981 0.0 1620
Msa0477070 AT1G80660.1 82.893 947 162 0 5 951 8 954 0.0 1614
Msa0477070 AT1G80660.4 82.898 918 157 0 5 922 8 925 0.0 1564
Msa0477070 AT1G80660.3 82.898 918 157 0 5 922 8 925 0.0 1563
Msa0477070 AT5G62670.1 80.947 950 176 2 6 951 8 956 0.0 1557
Msa0477070 AT3G47950.1 80.842 950 177 2 6 951 12 960 0.0 1554
Msa0477070 AT3G47950.2 80.842 950 177 2 6 951 12 960 0.0 1554
Msa0477070 AT2G18960.3 86.215 885 122 0 67 951 1 885 0.0 1535
Msa0477070 AT2G18960.2 86.215 885 122 0 67 951 1 885 0.0 1535
Msa0477070 AT1G80660.2 83.152 825 139 0 127 951 1 825 0.0 1454
Msa0477070 AT3G60330.4 72.737 961 243 4 5 951 6 961 0.0 1419
Msa0477070 AT3G60330.3 72.737 961 243 4 5 951 6 961 0.0 1419
Msa0477070 AT3G60330.2 72.529 961 245 4 5 951 6 961 0.0 1415
Msa0477070 AT3G60330.1 72.529 961 245 4 5 951 6 961 0.0 1415
Msa0477070 AT1G17260.1 70.899 945 265 2 7 951 13 947 0.0 1350
Msa0477070 AT2G24520.4 87.791 688 84 0 264 951 1 688 0.0 1269
Msa0477070 AT5G57350.3 83.430 688 113 1 264 951 1 687 0.0 1202
Msa0477070 AT4G11730.1 65.517 464 150 5 3 463 4 460 0.0 613
Msa0477070 AT4G11730.1 68.942 293 86 3 569 857 480 771 1.72e-123 395
Msa0477070 AT4G29900.1 25.348 718 417 20 38 656 159 856 4.95e-47 183
Msa0477070 AT4G29900.2 25.348 718 417 20 38 656 159 856 4.95e-47 183
Msa0477070 AT5G57110.1 25.000 708 428 19 38 656 159 852 7.99e-47 182
Msa0477070 AT5G57110.3 25.000 708 428 19 38 656 159 852 7.99e-47 182
Msa0477070 AT5G57110.2 25.000 708 428 19 38 656 159 852 7.99e-47 182
Msa0477070 AT3G22910.1 25.963 597 363 16 133 656 224 814 2.27e-46 181
Msa0477070 AT3G57330.2 24.100 722 456 22 22 671 64 765 2.59e-44 174
Msa0477070 AT1G27770.4 23.874 733 455 24 12 656 108 825 2.73e-44 174
Msa0477070 AT1G27770.1 23.874 733 455 24 12 656 108 825 2.73e-44 174
Msa0477070 AT2G22950.1 25.000 736 430 24 30 674 129 833 2.77e-44 174
Msa0477070 AT1G27770.3 23.738 733 456 24 12 656 45 762 3.10e-44 174
Msa0477070 AT3G57330.1 24.118 709 447 21 34 671 132 820 3.66e-44 174
Msa0477070 AT4G37640.1 25.588 723 420 24 27 656 125 822 4.03e-44 174
Msa0477070 AT2G41560.2 24.313 728 452 24 21 671 16 721 9.97e-42 166
Msa0477070 AT2G41560.3 24.313 728 452 24 21 671 16 721 9.97e-42 166
Msa0477070 AT2G41560.4 24.313 728 452 24 21 671 16 721 9.97e-42 166
Msa0477070 AT2G41560.1 24.038 728 454 23 21 671 118 823 1.15e-41 166
Msa0477070 AT3G21180.1 23.699 730 450 21 21 656 153 869 8.47e-41 163
Msa0477070 AT3G63380.1 24.534 697 437 21 39 656 132 818 3.77e-35 145
Msa0477070 AT1G10130.1 27.966 472 283 18 424 844 510 975 7.27e-35 144
Msa0477070 AT1G10130.1 30.994 342 203 11 34 345 23 361 4.36e-28 122
Msa0477070 AT1G07810.1 30.053 376 203 13 21 345 31 397 4.98e-31 132
Msa0477070 AT1G07810.1 28.571 378 207 11 406 730 514 881 1.51e-25 114
Msa0477070 AT1G07670.2 29.787 376 204 13 21 345 31 397 5.67e-31 132
Msa0477070 AT1G07670.2 31.935 310 170 9 457 730 577 881 3.82e-26 116
Msa0477070 AT1G07670.1 29.787 376 204 13 21 345 31 397 5.67e-31 132
Msa0477070 AT1G07670.1 31.935 310 170 9 457 730 577 881 3.82e-26 116
Msa0477070 AT4G00900.2 31.122 392 205 15 395 732 499 879 3.61e-30 129
Msa0477070 AT4G00900.2 28.571 371 211 11 21 342 14 379 1.50e-27 120
Msa0477070 AT4G00900.1 31.122 392 205 15 395 732 499 879 3.61e-30 129
Msa0477070 AT4G00900.1 28.571 371 211 11 21 342 14 379 1.50e-27 120
Msa0477070 AT1G63440.1 24.916 594 354 18 101 664 412 943 4.42e-27 119
Msa0477070 AT5G44790.1 23.333 600 355 18 113 667 418 957 2.08e-24 110
Msa0477070 AT1G27770.2 23.891 586 355 21 12 515 108 684 4.52e-23 106
Msa0477070 AT4G30110.1 23.008 665 399 22 60 685 99 689 1.64e-22 104
Msa0477070 AT4G30110.2 23.008 665 399 22 60 685 99 689 1.64e-22 104
Msa0477070 AT5G21930.2 22.980 557 331 18 153 674 354 847 1.56e-21 101
Msa0477070 AT5G21930.1 22.980 557 331 18 153 674 354 847 1.56e-21 101
Msa0477070 AT5G21930.4 23.031 508 300 16 153 628 354 802 2.16e-18 91.3
Msa0477070 AT5G21930.3 22.662 556 311 19 153 674 354 824 3.50e-18 90.5
Msa0477070 AT5G53010.1 21.980 687 455 17 38 656 185 858 5.45e-18 90.1
Msa0477070 AT4G33520.2 21.865 654 417 15 95 710 344 941 3.00e-17 87.8
Msa0477070 AT4G33520.3 22.828 587 372 13 95 656 344 874 3.95e-17 87.4
Msa0477070 AT2G19110.2 21.418 677 388 22 63 685 112 698 5.85e-15 80.5
Msa0477070 AT2G19110.3 21.418 677 388 22 63 685 112 698 5.85e-15 80.5
Msa0477070 AT2G19110.1 21.418 677 388 22 63 685 112 698 5.85e-15 80.5

Find 267 sgRNAs with CRISPR-Local

Find 456 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAGCTTTGCAAGAATTA+AGG 0.202354 3_3:+81173182 Msa0477070:CDS
TGTTGGTATCATTTCTCTTT+TGG 0.205719 3_3:+81168982 Msa0477070:CDS
ACATTGACTCTGACGGAAAT+TGG 0.218673 3_3:+81170938 Msa0477070:CDS
CGAGCGTGGACTCCGTTCTT+TGG 0.218966 3_3:+81171151 Msa0477070:CDS
TGAAGAAGATGCTGCAATTT+TGG 0.219025 3_3:+81169923 Msa0477070:CDS
AAAGGCATGCGACCACAATT+TGG 0.235638 3_3:+81174518 Msa0477070:three_prime_UTR
TTATAGCAGTATATGCTAAT+TGG 0.236742 3_3:+81173163 Msa0477070:CDS
AACATTATCTGGTATATATT+AGG 0.238496 3_3:+81174830 Msa0477070:three_prime_UTR
ATCCTATCAACCATGTTATT+TGG 0.247719 3_3:-81174273 None:intergenic
GGGGTTGGGCTGGTGTAATC+TGG 0.254805 3_3:+81173214 Msa0477070:CDS
ATAATTATATACCCTTGTTT+TGG 0.255665 3_3:-81169083 None:intergenic
TATGGAAGCTGCTGCTATTA+TGG 0.264670 3_3:+81168910 Msa0477070:CDS
GCAGATACATTAACATTATC+TGG 0.282151 3_3:+81174819 Msa0477070:three_prime_UTR
TTCTTGCAGCAAGGGCTTCT+AGG 0.285624 3_3:+81170579 Msa0477070:CDS
GCATATTTATTTACCTCCTT+TGG 0.295641 3_3:-81170653 None:intergenic
TGCTATTATGGCCATTGCTT+TGG 0.300734 3_3:+81168922 Msa0477070:CDS
CAGCGGTTGGTTTGAGTCAT+AGG 0.306940 3_3:-81167373 None:intergenic
GCCAACAATTGCAGCATCTA+TGG 0.309947 3_3:-81170618 None:intergenic
TATCTCACCATCATTTAGTA+TGG 0.316399 3_3:-81172348 None:intergenic
CAAAGCTTGGGATAATCTTC+TGG 0.316415 3_3:+81173305 Msa0477070:CDS
TGGAGCTTTGCAAGAATTAA+GGG 0.318513 3_3:+81173183 Msa0477070:CDS
GATATCATCAGCATTAAATT+AGG 0.323247 3_3:+81169954 Msa0477070:CDS
AGACGGAATTGACAATCTTT+TGG 0.337942 3_3:+81170313 Msa0477070:CDS
AAGACCTGGTCTTCTCCTAT+TGG 0.340057 3_3:+81172830 Msa0477070:CDS
TTGTCTGTTACCATGGCTAT+TGG 0.341742 3_3:+81170377 Msa0477070:CDS
CGTAACCCTGTTCTTCTTGA+AGG 0.343646 3_3:-81174096 None:intergenic
CTATTAAGACTCTGTGTGTT+TGG 0.344787 3_3:+81167511 Msa0477070:five_prime_UTR
GAACCCTTTATCATGGGTTA+TGG 0.350255 3_3:+81168892 Msa0477070:CDS
ATGGCCATTGCTTTGGCTAA+TGG 0.350781 3_3:+81168929 Msa0477070:CDS
ATCCTTGGATATTGTCATAA+TGG 0.352453 3_3:-81172455 None:intergenic
TCTGAGGGATTCTTTGTTGC+CGG 0.354428 3_3:-81170059 None:intergenic
AGAAATTACCAATTGCTGTT+AGG 0.354571 3_3:-81170217 None:intergenic
TTTCCTTCTTTGTTGCAGTA+AGG 0.354691 3_3:-81174638 None:intergenic
CTATTATTGCAGGACAAGTT+TGG 0.356032 3_3:+81172690 Msa0477070:intron
TTCTTTGGGTGTTGCTAGAC+AGG 0.356432 3_3:+81171166 Msa0477070:CDS
GAGCGTGGACTCCGTTCTTT+GGG 0.361280 3_3:+81171152 Msa0477070:CDS
TAAGGGAATGGGATGGGGTT+GGG 0.365555 3_3:+81173200 Msa0477070:CDS
GGCTTCTAGGACTGAGAATC+AGG 0.365755 3_3:+81170592 Msa0477070:CDS
CTTGCCATTGCCAAGGAAAC+TGG 0.367359 3_3:+81171524 Msa0477070:CDS
CGAATCAGTCGTGAAGCTTA+AGG 0.367521 3_3:+81174019 Msa0477070:CDS
CTGAAAGTGACCAACTTGAT+TGG 0.369358 3_3:-81170189 None:intergenic
GCTTCCATAACCCATGATAA+AGG 0.369885 3_3:-81168896 None:intergenic
CCAACAAAATCCTGCCAATC+AGG 0.370205 3_3:-81168965 None:intergenic
GCCAACAGGCTTCAAGTGTT+TGG 0.371772 3_3:+81168809 Msa0477070:CDS
GACTTATAATACTGACTTGT+AGG 0.372124 3_3:-81172761 None:intergenic
GGAATGGGATGGGGTTGGGC+TGG 0.376471 3_3:+81173204 Msa0477070:CDS
CAGTATAGTTCTTCATCCTT+TGG 0.376619 3_3:-81172008 None:intergenic
CACAGGCACGAGCTGGTGTC+AGG 0.380163 3_3:+81170863 Msa0477070:intron
TGCATTTGCTCAATTGCTGT+TGG 0.380271 3_3:+81170239 Msa0477070:CDS
AGTGTTTGGTCCAAACAAAT+TGG 0.380860 3_3:+81168823 Msa0477070:CDS
CAGAAAGTCCTAACAGCAAT+TGG 0.384030 3_3:+81170209 Msa0477070:CDS
GCTGCTGCTGCTCTCATGGC+TGG 0.384035 3_3:+81169052 Msa0477070:CDS
TTCTCAATCAACTCATCAAC+TGG 0.387666 3_3:-81171629 None:intergenic
TCATGTTCATTGCCTTGATC+TGG 0.387843 3_3:+81172288 Msa0477070:CDS
AGTTTCCAACTGTCTGGTTG+TGG 0.392732 3_3:-81172493 None:intergenic
AAGGCATGCGACCACAATTT+GGG 0.393874 3_3:+81174519 Msa0477070:three_prime_UTR
AGGGCTGCCATCATTTCATC+AGG 0.394338 3_3:-81172735 None:intergenic
CAACTGTCTGGTTGTGGAGA+TGG 0.394486 3_3:-81172487 None:intergenic
AGAGGAGATACTATTCTCTT+AGG 0.395076 3_3:+81174248 Msa0477070:three_prime_UTR
GGACAACCTTCAAGAAGAAC+AGG 0.399173 3_3:+81174090 Msa0477070:three_prime_UTR
GGGCTATCTTTATCTTTCTC+AGG 0.399203 3_3:-81171292 None:intergenic
AAAACAGTTGGCATAGCAAT+TGG 0.400400 3_3:-81170356 None:intergenic
TTCCTTCTTTGTTGCAGTAA+GGG 0.401327 3_3:-81174637 None:intergenic
ATTATACTGTTTAAGAAGCT+TGG 0.403584 3_3:+81174069 Msa0477070:exon
CTTATTTAAAGTCAGAGTTC+CGG 0.405876 3_3:-81170492 None:intergenic
CTCTTGTCTACAGGATTGAA+TGG 0.408748 3_3:-81170901 None:intergenic
TCTCTCAGTTTCCAACTGTC+TGG 0.408905 3_3:-81172499 None:intergenic
TTCACAACAAAGAAAGACTA+TGG 0.408967 3_3:+81173696 Msa0477070:CDS
CAAACAAATTGGAAGAGAAA+AGG 0.409390 3_3:+81168834 Msa0477070:CDS
GTTGATCAGTCTGCTTTAAC+CGG 0.412458 3_3:+81170026 Msa0477070:CDS
TAATGCTGCTGCTGCTCTCA+TGG 0.415083 3_3:+81169048 Msa0477070:CDS
AACAAATAGTTTACCTGCTC+AGG 0.416210 3_3:-81170982 None:intergenic
TTGTTCCCATTCCAAGCCTT+CGG 0.418174 3_3:-81171547 None:intergenic
AGACCTGGTCTTCTCCTATT+GGG 0.419290 3_3:+81172831 Msa0477070:CDS
GCTGATGCTCGTCTGCTTGA+GGG 0.419597 3_3:+81169990 Msa0477070:CDS
AATGACAGCTATTGAGGAAA+TGG 0.420930 3_3:+81170439 Msa0477070:CDS
GAGAAGGCTGATGGATTTGC+TGG 0.421728 3_3:+81171647 Msa0477070:CDS
AAAGCAGTTCTCTTGTCTAC+AGG 0.423643 3_3:-81170910 None:intergenic
AAGGAAACTGGCCGAAGGCT+TGG 0.428150 3_3:+81171536 Msa0477070:CDS
AAGCCTTCGGCCAGTTTCCT+TGG 0.428791 3_3:-81171534 None:intergenic
GTGAATGTTAAGATGATTAC+TGG 0.436771 3_3:+81171409 Msa0477070:CDS
GAAGCAGTTGTCATTGCTAC+TGG 0.437520 3_3:+81170122 Msa0477070:CDS
TTGTCACCAGGTCCCGTAGC+TGG 0.443803 3_3:+81172796 Msa0477070:CDS
GAATCAGTCGTGAAGCTTAA+GGG 0.446216 3_3:+81174020 Msa0477070:CDS
TAAATTTGTTCACAGGCTTA+GGG 0.449466 3_3:+81173971 Msa0477070:intron
TGCAACTTCAGCACGTCTCT+TGG 0.453611 3_3:-81173847 None:intergenic
AAGAATTAAGGGAATGGGAT+GGG 0.454877 3_3:+81173194 Msa0477070:CDS
ACTGCTCAGAGGACTCTTCA+TGG 0.455575 3_3:+81173747 Msa0477070:CDS
TGAAGTTCTTAGGATTTATG+TGG 0.456304 3_3:+81168870 Msa0477070:CDS
GAAGGATACCGATTTCTTCT+CGG 0.456878 3_3:+81172591 Msa0477070:CDS
TTGAAAAGGTTGGTTGTGTC+AGG 0.456888 3_3:-81173780 None:intergenic
GTCAATTACCATTCGTATTG+TGG 0.456935 3_3:+81172126 Msa0477070:CDS
CGGTAACCGGACAGGTTGGC+TGG 0.459017 3_3:-81174920 None:intergenic
AGAATTAAGGGAATGGGATG+GGG 0.459676 3_3:+81173195 Msa0477070:CDS
TTATGTGGAACCCTTTATCA+TGG 0.461954 3_3:+81168885 Msa0477070:CDS
CAATCATAAAAGCACCCAAT+AGG 0.462642 3_3:-81172845 None:intergenic
TATCCATCTTCTTCATTGCT+CGG 0.463155 3_3:+81171575 Msa0477070:CDS
GCGTTAAAGAGAGCAGATAT+TGG 0.463815 3_3:+81171874 Msa0477070:CDS
GCAACTGCAAAGAGGATGTC+AGG 0.465143 3_3:+81171096 Msa0477070:CDS
AAACAAATTGGAAGAGAAAA+GGG 0.465202 3_3:+81168835 Msa0477070:CDS
GATATTGTCCTTACTGAGCC+TGG 0.466202 3_3:+81171940 Msa0477070:CDS
TCTGGTTCAACTGTTAAGAA+AGG 0.466925 3_3:+81170092 Msa0477070:CDS
CTATACTTGCGGTGTTGTAT+CGG 0.467501 3_3:-81170290 None:intergenic
AGCTATTCTTGTCATTGAAA+AGG 0.467817 3_3:-81173794 None:intergenic
CTTCCATAACCCATGATAAA+GGG 0.468799 3_3:-81168895 None:intergenic
ACAAATTGCCATGGTGCACC+AGG 0.469750 3_3:-81171313 None:intergenic
AGGGAGCTTCACACTCTAAA+GGG 0.473612 3_3:+81173990 Msa0477070:CDS
AAAGAGAATGACAGCTATTG+AGG 0.476115 3_3:+81170433 Msa0477070:CDS
TACCAAATAACATGGTTGAT+AGG 0.477229 3_3:+81174271 Msa0477070:three_prime_UTR
TTAAGGGAATGGGATGGGGT+TGG 0.477879 3_3:+81173199 Msa0477070:CDS
CATCCTCTTTGCAGTTGCAG+AGG 0.478214 3_3:-81171091 None:intergenic
AATTATTACCGAGAAGAAAT+CGG 0.479237 3_3:-81172599 None:intergenic
TTTGCTACTGGTGTTGTGCT+AGG 0.479390 3_3:+81172526 Msa0477070:CDS
GGTGCACCATGGCAATTTGT+TGG 0.479985 3_3:+81171316 Msa0477070:CDS
TTACGAATTTGAGTATATCA+AGG 0.480257 3_3:-81173263 None:intergenic
AGATGGTTTCACTCTATCCT+TGG 0.480543 3_3:-81172470 None:intergenic
TCAATGACAAGAATAGCTAC+AGG 0.482223 3_3:+81173799 Msa0477070:CDS
TTCATTGAAGAGAATAATGC+TGG 0.482524 3_3:+81169025 Msa0477070:CDS
TGCTCGAACACTTCCTCTAC+TGG 0.482543 3_3:-81168746 None:intergenic
TTTAACCGGAGAATCTCTTC+CGG 0.485484 3_3:+81170040 Msa0477070:CDS
ATTCTTGTCATTGAAAAGGT+TGG 0.486676 3_3:-81173790 None:intergenic
GTCCTCTGCAGTGACAAAAC+CGG 0.488160 3_3:+81170473 Msa0477070:CDS
GCCATAGATGCTGCAATTGT+TGG 0.488334 3_3:+81170617 Msa0477070:CDS
TAGGGAGCTTCACACTCTAA+AGG 0.489909 3_3:+81173989 Msa0477070:CDS
ATTGCTTTGGCTAATGGCGG+TGG 0.494736 3_3:+81168935 Msa0477070:CDS
TGCTGATGCTCGTCTGCTTG+AGG 0.496020 3_3:+81169989 Msa0477070:CDS
ACAAGTCAGTATTATAAGTC+AGG 0.496065 3_3:+81172764 Msa0477070:CDS
TGTTATCCTTCTTGCAGCAA+GGG 0.497356 3_3:+81170571 Msa0477070:CDS
TCATGGAACAATATAAATGC+AGG 0.498216 3_3:-81167452 None:intergenic
TTTGCAAGAATTAAGGGAAT+GGG 0.499506 3_3:+81173189 Msa0477070:CDS
ATGTTCTAAGTGGCAAAGCT+TGG 0.500130 3_3:+81173292 Msa0477070:CDS
AAACATATATGTGGAATGAC+AGG 0.500678 3_3:+81171829 Msa0477070:CDS
TGGAAGACCTCCTGATTGGC+AGG 0.503131 3_3:+81168955 Msa0477070:CDS
AACTGGCCGAAGGCTTGGAA+TGG 0.503926 3_3:+81171541 Msa0477070:CDS
CAGCTGAAATGTTCAAGAGC+AGG 0.504044 3_3:+81168767 Msa0477070:CDS
TAGCAAAGGTGCTCCTGAGC+AGG 0.507970 3_3:+81170969 Msa0477070:CDS
TCTTGTCTACAGGATTGAAT+GGG 0.508672 3_3:-81170900 None:intergenic
ATTGTATTCATAGGTAGAAA+CGG 0.510261 3_3:-81174940 None:intergenic
TGTTCTAAGTGGCAAAGCTT+GGG 0.510732 3_3:+81173293 Msa0477070:CDS
CATCAGACGAAGGAGCCAAC+AGG 0.511617 3_3:+81168795 Msa0477070:CDS
TCGGCCAGTTTCCTTGGCAA+TGG 0.513300 3_3:-81171528 None:intergenic
AAAATCAAACTTCCAGATCA+AGG 0.513418 3_3:-81172300 None:intergenic
ATATCTGCTCTCTTTAACGC+AGG 0.513794 3_3:-81171871 None:intergenic
TCATAGGTAGAAACGGTAAC+CGG 0.515272 3_3:-81174933 None:intergenic
GCTAGACATGAAGTCAGAAA+AGG 0.517281 3_3:-81174438 None:intergenic
CACTCAGACCAGGCTCAGTA+AGG 0.519638 3_3:-81171948 None:intergenic
TCAAAACCAGCCAACCTGTC+CGG 0.520672 3_3:+81174914 Msa0477070:three_prime_UTR
AACCCTTACTGCAACAAAGA+AGG 0.522582 3_3:+81174635 Msa0477070:three_prime_UTR
GCGATAATCAACACCATGAA+GGG 0.525263 3_3:-81172326 None:intergenic
CTCTTAGGTACCAAATAACA+TGG 0.525764 3_3:+81174263 Msa0477070:three_prime_UTR
TTAACTTACATTGACTCTGA+CGG 0.526827 3_3:+81170931 Msa0477070:CDS
TGGTCCTTTGTTGAAAGACC+TGG 0.527044 3_3:+81172816 Msa0477070:CDS
TGCACTTACCACAATACGAA+TGG 0.527828 3_3:-81172134 None:intergenic
GCGGTGGAAGACCTCCTGAT+TGG 0.529609 3_3:+81168951 Msa0477070:CDS
TTCATTGCTCGGTCAAAGCA+AGG 0.529827 3_3:+81171586 Msa0477070:CDS
TGACCGAGCAATGAAGAAGA+TGG 0.531357 3_3:-81171578 None:intergenic
TGTTGCCGGAAGAGATTCTC+CGG 0.532571 3_3:-81170045 None:intergenic
TTTCAACAAAGGACCAGCTA+CGG 0.533044 3_3:-81172809 None:intergenic
CTGAGAGAGATATTTGCTAC+TGG 0.533620 3_3:+81172514 Msa0477070:CDS
ACAGCTATTGAGGAAATGGC+AGG 0.534436 3_3:+81170443 Msa0477070:CDS
ACTGGCCGAAGGCTTGGAAT+GGG 0.534538 3_3:+81171542 Msa0477070:CDS
CAATTCCGTCTCTATACTTG+CGG 0.537350 3_3:-81170301 None:intergenic
AGCGGTTGGTTTGAGTCATA+GGG 0.537863 3_3:-81167372 None:intergenic
TAATACTGACTTGTAGGTAG+AGG 0.538323 3_3:-81172755 None:intergenic
CTTTGCAAGAATTAAGGGAA+TGG 0.538856 3_3:+81173188 Msa0477070:CDS
TACGAATTTGAGTATATCAA+GGG 0.539623 3_3:-81173262 None:intergenic
TCAAGCAGACGAGCATCAGC+AGG 0.540988 3_3:-81169987 None:intergenic
AGAAGAGAGAGAAGCTCAGT+GGG 0.544555 3_3:+81173722 Msa0477070:CDS
ATGTTATCCTTCTTGCAGCA+AGG 0.545283 3_3:+81170570 Msa0477070:CDS
GGCGATAATCAACACCATGA+AGG 0.547314 3_3:-81172327 None:intergenic
TATGTGGAACCCTTTATCAT+GGG 0.547893 3_3:+81168886 Msa0477070:CDS
ACCAAACACTTGAAGCCTGT+TGG 0.547895 3_3:-81168810 None:intergenic
TACCTCTATTTGATCCTCCT+AGG 0.549204 3_3:+81171344 Msa0477070:CDS
TTCAACAAAGGACCAGCTAC+GGG 0.551987 3_3:-81172808 None:intergenic
ATTATCGCCATACTAAATGA+TGG 0.552243 3_3:+81172341 Msa0477070:CDS
TCCTCTAGCTAGTGGCATTG+AGG 0.553716 3_3:-81174231 None:intergenic
AAAGGACCAGCTACGGGACC+TGG 0.558086 3_3:-81172802 None:intergenic
TACTGAGTGATGCAGAGTCA+TGG 0.558563 3_3:-81167469 None:intergenic
TTAATGTATCTGCTCAACAT+AGG 0.559131 3_3:-81174809 None:intergenic
ATCACAAGAGCTCTGAACCT+TGG 0.559361 3_3:+81171385 Msa0477070:CDS
TGAATTACACAGGCACGAGC+TGG 0.559826 3_3:+81170856 Msa0477070:intron
TGCCTAGGAGGATCAAATAG+AGG 0.560994 3_3:-81171346 None:intergenic
AAGAAGAGAGAGAAGCTCAG+TGG 0.561548 3_3:+81173721 Msa0477070:CDS
AACTCATGTGTTGCGAGGTG+CGG 0.561587 3_3:-81174542 None:intergenic
GAGTTGATTGAGAAGGCTGA+TGG 0.562854 3_3:+81171638 Msa0477070:CDS
CATCTCCACAACCAGACAGT+TGG 0.564636 3_3:+81172488 Msa0477070:CDS
TAGAAGCCCTTGCTGCAAGA+AGG 0.568196 3_3:-81170577 None:intergenic
AACATGTAGGTTCTAAGAGA+TGG 0.568330 3_3:+81169891 Msa0477070:intron
GTTGACAGCACCAATCAAGT+TGG 0.569975 3_3:+81170179 Msa0477070:CDS
GGTAGAAACGGTAACCGGAC+AGG 0.570044 3_3:-81174928 None:intergenic
AGAAAGGGTGATGCAGCGGT+TGG 0.570636 3_3:-81167386 None:intergenic
ACGAATTTGAGTATATCAAG+GGG 0.572707 3_3:-81173261 None:intergenic
ATTGACAAGTTCGCCGAGCG+TGG 0.575480 3_3:+81171137 Msa0477070:CDS
CAAGAGAGGAAACATATATG+TGG 0.577053 3_3:+81171820 Msa0477070:CDS
CTAATAATGACACTCAGACC+AGG 0.578038 3_3:-81171958 None:intergenic
CAAAGAACGGAGTCCACGCT+CGG 0.579535 3_3:-81171150 None:intergenic
TCGTAAAGAAACTGCAAGAG+AGG 0.582235 3_3:+81171806 Msa0477070:CDS
TTGAACGACATTAGTAGTCA+AGG 0.583033 3_3:-81174388 None:intergenic
GTAATCCGCTATGTTCTAAG+TGG 0.583653 3_3:+81173282 Msa0477070:CDS
TACCATTATGACAATATCCA+AGG 0.583733 3_3:+81172453 Msa0477070:CDS
GGATAATCTTCTGGAGAACA+AGG 0.585187 3_3:+81173314 Msa0477070:CDS
ATGGTAACAGACAAAACAGT+TGG 0.587258 3_3:-81170368 None:intergenic
TATTGAGGAAATGGCAGGGA+TGG 0.587411 3_3:+81170448 Msa0477070:CDS
GCGAGGTGCGGCCCAAATTG+TGG 0.587526 3_3:-81174530 None:intergenic
ACCAGAAAACACTTCATCTG+AGG 0.591597 3_3:-81170075 None:intergenic
AAGGTTCAGAGCTCTTGTGA+TGG 0.591709 3_3:-81171383 None:intergenic
AATACTGACTTGTAGGTAGA+GGG 0.591903 3_3:-81172754 None:intergenic
ATAGTATCTCCTCTAGCTAG+TGG 0.593212 3_3:-81174239 None:intergenic
CCAGAAAACACTTCATCTGA+GGG 0.594004 3_3:-81170074 None:intergenic
CAAGAATTAAGGGAATGGGA+TGG 0.596218 3_3:+81173193 Msa0477070:CDS
GTCTAGCAACACCCAAAGAA+CGG 0.599274 3_3:-81171163 None:intergenic
AATTTGAACACTGTCCAACA+TGG 0.599317 3_3:+81167535 Msa0477070:exon
AAGGCTGATACCTCCCATGT+TGG 0.606372 3_3:-81167549 None:intergenic
GTTTCAGCACTATCATGCCT+AGG 0.606943 3_3:-81171361 None:intergenic
TTAATGCTGATGATATCACC+TGG 0.609022 3_3:-81169948 None:intergenic
CAATGACAAGAATAGCTACA+GGG 0.610067 3_3:+81173800 Msa0477070:CDS
TGGCATGCTTGCTGATCCAA+AGG 0.612764 3_3:+81170637 Msa0477070:CDS
GAGAAAGATAAAGATAGCCC+TGG 0.613292 3_3:+81171295 Msa0477070:CDS
GTTTAGTCGTAACCAATGAG+AGG 0.614173 3_3:+81174776 Msa0477070:three_prime_UTR
GCCATTGCTTTGGCTAATGG+CGG 0.614878 3_3:+81168932 Msa0477070:CDS
GCACCCAATAGGAGAAGACC+AGG 0.615453 3_3:-81172834 None:intergenic
TCCTCAATGCCACTAGCTAG+AGG 0.617823 3_3:+81174230 Msa0477070:three_prime_UTR
GGGCTGCCATCATTTCATCA+GGG 0.619360 3_3:-81172734 None:intergenic
GATGCTACAGATGCCGCTAG+AGG 0.620087 3_3:+81171910 Msa0477070:CDS
GAACCTCTGCAACTGCAAAG+AGG 0.621118 3_3:+81171088 Msa0477070:CDS
CTCAGTGGGCAACTGCTCAG+AGG 0.621585 3_3:+81173736 Msa0477070:CDS
ACAGGCACGAGCTGGTGTCA+GGG 0.622880 3_3:+81170864 Msa0477070:intron
TCTGTGAGAACCAATAGCCA+TGG 0.624951 3_3:-81170387 None:intergenic
CATGGAACAATATAAATGCA+GGG 0.625295 3_3:-81167451 None:intergenic
TGTAGGTTCTAAGAGATGGT+AGG 0.625860 3_3:+81169895 Msa0477070:intron
TGATCAGCTTGCCATTGCCA+AGG 0.627353 3_3:+81171517 Msa0477070:CDS
AGTTGATGAGTTGATTGAGA+AGG 0.629685 3_3:+81171631 Msa0477070:CDS
ACCGCCATTAGCCAAAGCAA+TGG 0.633653 3_3:-81168933 None:intergenic
AGAGACGTGCTGAAGTTGCA+CGG 0.635563 3_3:+81173850 Msa0477070:CDS
TCAGGAACGAATTCCAGTAG+AGG 0.639267 3_3:+81168733 Msa0477070:intron
AATATCAGAAGCACCTCTAG+CGG 0.640398 3_3:-81171923 None:intergenic
AACAGACCAACAAATTGCCA+TGG 0.640731 3_3:-81171322 None:intergenic
GAAACGGTAACCGGACAGGT+TGG 0.640892 3_3:-81174924 None:intergenic
CAACACCGCAAGTATAGAGA+CGG 0.642140 3_3:+81170296 Msa0477070:CDS
TTGCCAAGGAAACTGGCCGA+AGG 0.646825 3_3:+81171531 Msa0477070:CDS
TCAGCACTATCATGCCTAGG+AGG 0.649052 3_3:-81171358 None:intergenic
ACAAAATCCTGCCAATCAGG+AGG 0.654781 3_3:-81168962 None:intergenic
CAGCTATTGAGGAAATGGCA+GGG 0.657394 3_3:+81170444 Msa0477070:CDS
ATATGTGGAATGACAGGTGA+TGG 0.659594 3_3:+81171835 Msa0477070:CDS
AAGACCAGGTCTTTCAACAA+AGG 0.660144 3_3:-81172820 None:intergenic
CATGGGAGGTATCAGCCTTG+AGG 0.660328 3_3:+81167553 Msa0477070:exon
ATTTGAACACTGTCCAACAT+GGG 0.660570 3_3:+81167536 Msa0477070:exon
AAGATAGCCCTGGTGCACCA+TGG 0.661281 3_3:+81171305 Msa0477070:CDS
TCTCACAGACTTTCTCAACA+AGG 0.668351 3_3:+81170401 Msa0477070:CDS
CAAATTGCCATGGTGCACCA+GGG 0.668629 3_3:-81171312 None:intergenic
TGTTGTGCTAGGTAGCTACA+TGG 0.674726 3_3:+81172537 Msa0477070:CDS
GGCACGAGCTGGTGTCAGGG+AGG 0.679297 3_3:+81170867 Msa0477070:intron
AGGTTCTAAGAGATGGTAGG+TGG 0.680535 3_3:+81169898 Msa0477070:intron
TGAACACTGTCCAACATGGG+AGG 0.680717 3_3:+81167539 Msa0477070:exon
GGCTGCAGCTGTTATCGCGG+TGG 0.681132 3_3:+81174604 Msa0477070:three_prime_UTR
CAATATCAAGGATTGTGATG+TGG 0.681168 3_3:+81174583 Msa0477070:three_prime_UTR
CTTTGCCACTTAGAACATAG+CGG 0.682408 3_3:-81173287 None:intergenic
GACAACCTTCAAGAAGAACA+GGG 0.683350 3_3:+81174091 Msa0477070:three_prime_UTR
TAATGCTGATGATATCACCT+GGG 0.685163 3_3:-81169947 None:intergenic
TCATCTTAACATTCACACCA+AGG 0.685618 3_3:-81171402 None:intergenic
CATGCTTGCTGATCCAAAGG+AGG 0.686175 3_3:+81170640 Msa0477070:CDS
AATTGGCATAGATCTAGCAA+AGG 0.686470 3_3:+81170955 Msa0477070:CDS
GCAGGTTTAACATCAGACGA+AGG 0.690232 3_3:+81168785 Msa0477070:CDS
GTGAAGAAAGGGTGATGCAG+CGG 0.701551 3_3:-81167390 None:intergenic
TGTGGCTGCAGCTGTTATCG+CGG 0.705933 3_3:+81174601 Msa0477070:three_prime_UTR
CTACATGGCACTAATGACAG+TGG 0.707394 3_3:+81172552 Msa0477070:CDS
CGAATTTGAGTATATCAAGG+GGG 0.718068 3_3:-81173260 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTTAATGTAAAATTT+AGG - chr3_3:81167817-81167836 None:intergenic 10.0%
!! TTGTAAAAAAAATGTTTATA+TGG - chr3_3:81168138-81168157 None:intergenic 10.0%
!!! TATAATATTATATTTTAGCT+AGG - chr3_3:81168330-81168349 None:intergenic 10.0%
!!! AGAAATTATTTGAAATAAAA+TGG - chr3_3:81168648-81168667 None:intergenic 10.0%
!!! ATATTTTTCAATTTAATTGA+CGG - chr3_3:81169203-81169222 None:intergenic 10.0%
!! ATATTATCAATATTTCAAAA+CGG - chr3_3:81169741-81169760 None:intergenic 10.0%
!!! TTTTGAAATATTGATAATAT+GGG + chr3_3:81169741-81169760 Msa0477070:intron 10.0%
!!! AATTTTTTTAATACCCAAAA+AGG + chr3_3:81167785-81167804 Msa0477070:intron 15.0%
!!! AGCTCTAATATAATATAATT+TGG - chr3_3:81168279-81168298 None:intergenic 15.0%
!! AAAATACTTATAACAAGATT+TGG - chr3_3:81168617-81168636 None:intergenic 15.0%
!!! ATGTTACAAAAGAAATATTT+TGG + chr3_3:81169352-81169371 Msa0477070:intron 15.0%
!! ATTAAAATCTAACAATTTCA+AGG - chr3_3:81169571-81169590 None:intergenic 15.0%
!!! GTTTTGAAATATTGATAATA+TGG + chr3_3:81169740-81169759 Msa0477070:intron 15.0%
!!! ACTAATTGATATTTTTTTTC+TGG + chr3_3:81171054-81171073 Msa0477070:intron 15.0%
!!! AAAAGTTAACTTATTTTTGA+AGG + chr3_3:81172178-81172197 Msa0477070:intron 15.0%
!! AATAGTATAAATTAGAATCT+AGG + chr3_3:81173065-81173084 Msa0477070:intron 15.0%
!!! ATAATTTTTTCATGATTTAC+AGG + chr3_3:81173131-81173150 Msa0477070:intron 15.0%
!! AGAAAGATGTAATATAATTA+GGG - chr3_3:81173444-81173463 None:intergenic 15.0%
!! AAAAAAATGAAGTGAAGAAA+GGG - chr3_3:81167404-81167423 None:intergenic 20.0%
!! AAAAAAAATGAAGTGAAGAA+AGG - chr3_3:81167405-81167424 None:intergenic 20.0%
!! AATAGCAAAATATAGAAACA+GGG - chr3_3:81168032-81168051 None:intergenic 20.0%
!! AAATAGCAAAATATAGAAAC+AGG - chr3_3:81168033-81168052 None:intergenic 20.0%
!! ACATAACAATTCATTAAACA+AGG + chr3_3:81168174-81168193 Msa0477070:intron 20.0%
!!! TTTGAAATAAAATGGACAAA+GGG - chr3_3:81168640-81168659 None:intergenic 20.0%
!!! ATTTGAAATAAAATGGACAA+AGG - chr3_3:81168641-81168660 None:intergenic 20.0%
!!! TAATTATATACCCTTGTTTT+GGG - chr3_3:81169085-81169104 None:intergenic 20.0%
!!! ATAATTATATACCCTTGTTT+TGG - chr3_3:81169086-81169105 None:intergenic 20.0%
!! AGTCATTGAAATTATAAGAT+TGG + chr3_3:81169142-81169161 Msa0477070:intron 20.0%
!!! ATTTAATTTCAGATATATCC+TGG - chr3_3:81169173-81169192 None:intergenic 20.0%
!!! GTATGTTTTATTCATTTTGA+TGG + chr3_3:81169329-81169348 Msa0477070:intron 20.0%
!! TAATCAAATTTAGTATTTGC+AGG + chr3_3:81169587-81169606 Msa0477070:intron 20.0%
!! AATCAAATTTAGTATTTGCA+GGG + chr3_3:81169588-81169607 Msa0477070:intron 20.0%
!!! AATTAAAATTTTGCAATCCT+AGG + chr3_3:81169713-81169732 Msa0477070:intron 20.0%
!!! ATTAAAATTTTGCAATCCTA+GGG + chr3_3:81169714-81169733 Msa0477070:intron 20.0%
!! TAATGACTAAATATTCAAGT+TGG - chr3_3:81169801-81169820 None:intergenic 20.0%
!! TGAACATAATCATAATCATA+CGG - chr3_3:81171026-81171045 None:intergenic 20.0%
!! ATGAACCATTTATATAAGTA+TGG - chr3_3:81172227-81172246 None:intergenic 20.0%
!!! ATTTGAAGTAAACAATATGA+AGG - chr3_3:81172386-81172405 None:intergenic 20.0%
!!! TCTTAATTTTTTTTGCTACT+AGG - chr3_3:81172654-81172673 None:intergenic 20.0%
!!! ATTTATACTATTTCTTCCTA+AGG - chr3_3:81173057-81173076 None:intergenic 20.0%
!! GAGAAAGATGTAATATAATT+AGG - chr3_3:81173445-81173464 None:intergenic 20.0%
!! TTCATCATAGTATTTATTAC+AGG - chr3_3:81173473-81173492 None:intergenic 20.0%
!!! GATTTTTTAAATTTGTTCAC+AGG + chr3_3:81173964-81173983 Msa0477070:intron 20.0%
!!! TAATCATGTGTTTTTAGATT+AGG + chr3_3:81174172-81174191 Msa0477070:three_prime_UTR 20.0%
!!! TTTTCAAAATCACAATATCA+AGG + chr3_3:81174571-81174590 Msa0477070:three_prime_UTR 20.0%
!! AACATTATCTGGTATATATT+AGG + chr3_3:81174830-81174849 Msa0477070:three_prime_UTR 20.0%
! AGTAGTAACAGTAACTTAAA+AGG - chr3_3:81167941-81167960 None:intergenic 25.0%
!!! AATTTTTCATTGAAAGCACT+GGG - chr3_3:81168232-81168251 None:intergenic 25.0%
!!! TAATTTTTCATTGAAAGCAC+TGG - chr3_3:81168233-81168252 None:intergenic 25.0%
! ATAATTTGGACCAAACTAAT+AGG - chr3_3:81168265-81168284 None:intergenic 25.0%
! AAGTTTCTCGTAACAAAAAA+TGG - chr3_3:81168459-81168478 None:intergenic 25.0%
! AAACAAATTGGAAGAGAAAA+GGG + chr3_3:81168835-81168854 Msa0477070:CDS 25.0%
!!! AGCAAATTTTTGAAGTTCTT+AGG + chr3_3:81168860-81168879 Msa0477070:CDS 25.0%
!!! AATTATATACCCTTGTTTTG+GGG - chr3_3:81169084-81169103 None:intergenic 25.0%
!! ATTATAAGATTGGTTAATCC+AGG + chr3_3:81169152-81169171 Msa0477070:intron 25.0%
!!! TTTTGTTTGCAATCATTGTT+TGG + chr3_3:81169464-81169483 Msa0477070:intron 25.0%
!! AACAATTTCAAGGATCATTT+TGG - chr3_3:81169561-81169580 None:intergenic 25.0%
! TGATAATAGATTTAGACAGA+AGG + chr3_3:81169682-81169701 Msa0477070:intron 25.0%
!! TTAAAATTTTGCAATCCTAG+GGG + chr3_3:81169715-81169734 Msa0477070:intron 25.0%
! GATATCATCAGCATTAAATT+AGG + chr3_3:81169954-81169973 Msa0477070:CDS 25.0%
!!! AATCTTTTGGTTCTATTGAT+TGG + chr3_3:81170326-81170345 Msa0477070:CDS 25.0%
!! TGTTGATAAAAACTTGATTG+AGG + chr3_3:81170520-81170539 Msa0477070:CDS 25.0%
!! TCTTTCTGATACTGAATTTT+AGG + chr3_3:81170796-81170815 Msa0477070:intron 25.0%
!! AGTTTTACTTTGAATTACAC+AGG + chr3_3:81170846-81170865 Msa0477070:intron 25.0%
!!! TTGAATGGTTTGTTTATAAC+AGG + chr3_3:81171264-81171283 Msa0477070:intron 25.0%
!!! TTTTTTCTCTTTCTATGACA+TGG + chr3_3:81171765-81171784 Msa0477070:intron 25.0%
! GCAATTAAATCAAGTAAGTT+TGG - chr3_3:81172041-81172060 None:intergenic 25.0%
! CTTGTCCATACTTATATAAA+TGG + chr3_3:81172219-81172238 Msa0477070:intron 25.0%
!!! TATTCTTCATTTTTCCAGTT+TGG + chr3_3:81172263-81172282 Msa0477070:intron 25.0%
! AATTATTACCGAGAAGAAAT+CGG - chr3_3:81172602-81172621 None:intergenic 25.0%
!!! ATTTTTTCATGATTTACAGG+TGG + chr3_3:81173134-81173153 Msa0477070:intron 25.0%
! TTATAGCAGTATATGCTAAT+TGG + chr3_3:81173163-81173182 Msa0477070:CDS 25.0%
! TACGAATTTGAGTATATCAA+GGG - chr3_3:81173265-81173284 None:intergenic 25.0%
! TTACGAATTTGAGTATATCA+AGG - chr3_3:81173266-81173285 None:intergenic 25.0%
! TGCAGTTGAAAATTTGAAAA+AGG - chr3_3:81173396-81173415 None:intergenic 25.0%
! GTTGACTAAATTAAGAAAGT+TGG - chr3_3:81173571-81173590 None:intergenic 25.0%
!! ATTTTGAATCTTGAAATCTC+TGG - chr3_3:81173646-81173665 None:intergenic 25.0%
! TAAAAAATCTCTTAGACACT+AGG - chr3_3:81173953-81173972 None:intergenic 25.0%
! ATTATACTGTTTAAGAAGCT+TGG + chr3_3:81174069-81174088 Msa0477070:exon 25.0%
!!! TGTTTTTAGATTAGGTTGAA+GGG + chr3_3:81174180-81174199 Msa0477070:three_prime_UTR 25.0%
!! TCCTTTTGTGAAAAATTGAA+TGG + chr3_3:81174203-81174222 Msa0477070:three_prime_UTR 25.0%
!! ACCATTCAATTTTTCACAAA+AGG - chr3_3:81174207-81174226 None:intergenic 25.0%
!!! ATTTACTTGCGTCTTATTTT+TGG + chr3_3:81174294-81174313 Msa0477070:three_prime_UTR 25.0%
!!! GCAATCAGAGTTTTAAATAA+AGG + chr3_3:81174500-81174519 Msa0477070:three_prime_UTR 25.0%
CATGGAACAATATAAATGCA+GGG - chr3_3:81167454-81167473 None:intergenic 30.0%
TCATGGAACAATATAAATGC+AGG - chr3_3:81167455-81167474 None:intergenic 30.0%
TAGCATGTTCATCATTCAAA+TGG - chr3_3:81167753-81167772 None:intergenic 30.0%
! ATTTAGGTACACTCCTTTTT+GGG - chr3_3:81167801-81167820 None:intergenic 30.0%
! AATTTAGGTACACTCCTTTT+TGG - chr3_3:81167802-81167821 None:intergenic 30.0%
!!! TTGAAACAACGTTGTTTTTC+AGG + chr3_3:81168715-81168734 Msa0477070:intron 30.0%
!! CTTTTCTCTTCCAATTTGTT+TGG - chr3_3:81168836-81168855 None:intergenic 30.0%
CAAACAAATTGGAAGAGAAA+AGG + chr3_3:81168834-81168853 Msa0477070:CDS 30.0%
TGAAGTTCTTAGGATTTATG+TGG + chr3_3:81168870-81168889 Msa0477070:CDS 30.0%
! TGTTGGTATCATTTCTCTTT+TGG + chr3_3:81168982-81169001 Msa0477070:CDS 30.0%
TTCATTGAAGAGAATAATGC+TGG + chr3_3:81169025-81169044 Msa0477070:CDS 30.0%
!!! ATTATATACCCTTGTTTTGG+GGG - chr3_3:81169083-81169102 None:intergenic 30.0%
! ATTTTGCACCACAATTTTGA+AGG + chr3_3:81169259-81169278 Msa0477070:intron 30.0%
GCATATAACCTTCAAAATTG+TGG - chr3_3:81169270-81169289 None:intergenic 30.0%
!!! AAGGTTATATGCTTGTTTTG+AGG + chr3_3:81169278-81169297 Msa0477070:intron 30.0%
!!! GAAATATTTTGGTGAAGTGA+AGG + chr3_3:81169363-81169382 Msa0477070:intron 30.0%
AAGTGAAGGACTTAATTGAT+TGG + chr3_3:81169377-81169396 Msa0477070:intron 30.0%
AATCAAAGTGAATAGTGCTA+GGG + chr3_3:81169652-81169671 Msa0477070:intron 30.0%
AGTTGGTCATTGAAATTGTA+GGG - chr3_3:81169784-81169803 None:intergenic 30.0%
! AAGTTGGTCATTGAAATTGT+AGG - chr3_3:81169785-81169804 None:intergenic 30.0%
TTTCTTGCTACAAAACATGT+AGG + chr3_3:81169878-81169897 Msa0477070:intron 30.0%
! AGAAATTACCAATTGCTGTT+AGG - chr3_3:81170220-81170239 None:intergenic 30.0%
! CTTATTTAAAGTCAGAGTTC+CGG - chr3_3:81170495-81170514 None:intergenic 30.0%
! TTGATTGAGGTTTTTGCTAA+GGG + chr3_3:81170533-81170552 Msa0477070:CDS 30.0%
GCATATTTATTTACCTCCTT+TGG - chr3_3:81170656-81170675 None:intergenic 30.0%
!! TTAACTTACATTGACTCTGA+CGG + chr3_3:81170931-81170950 Msa0477070:CDS 30.0%
!!! ACTATTTGTTTTGTTAGCAG+TGG + chr3_3:81170995-81171014 Msa0477070:intron 30.0%
ACATAATCATAATCATACGG+TGG - chr3_3:81171023-81171042 None:intergenic 30.0%
CAATAGCATCAACAAAAGAA+GGG - chr3_3:81171247-81171266 None:intergenic 30.0%
TCAATAGCATCAACAAAAGA+AGG - chr3_3:81171248-81171267 None:intergenic 30.0%
! CTTTTGTTGATGCTATTGAA+TGG + chr3_3:81171249-81171268 Msa0477070:intron 30.0%
GTGAATGTTAAGATGATTAC+TGG + chr3_3:81171409-81171428 Msa0477070:CDS 30.0%
ATGATTACTGGTAAGATTTG+AGG + chr3_3:81171421-81171440 Msa0477070:intron 30.0%
AAACATATATGTGGAATGAC+AGG + chr3_3:81171829-81171848 Msa0477070:CDS 30.0%
GTGTTAGAATGCTAAAGATT+TGG - chr3_3:81172076-81172095 None:intergenic 30.0%
ATTGTGGTAAGTGCAAAAAT+AGG + chr3_3:81172142-81172161 Msa0477070:intron 30.0%
AAAATCAAACTTCCAGATCA+AGG - chr3_3:81172303-81172322 None:intergenic 30.0%
TATCTCACCATCATTTAGTA+TGG - chr3_3:81172351-81172370 None:intergenic 30.0%
TACCATTATGACAATATCCA+AGG + chr3_3:81172453-81172472 Msa0477070:CDS 30.0%
ATCCTTGGATATTGTCATAA+TGG - chr3_3:81172458-81172477 None:intergenic 30.0%
!!! TCATTTCATCAGGGTTTTTT+CGG - chr3_3:81172728-81172747 None:intergenic 30.0%
AAAAAACCCTGATGAAATGA+TGG + chr3_3:81172728-81172747 Msa0477070:CDS 30.0%
!! GACTTATAATACTGACTTGT+AGG - chr3_3:81172764-81172783 None:intergenic 30.0%
ACAAGTCAGTATTATAAGTC+AGG + chr3_3:81172764-81172783 Msa0477070:CDS 30.0%
TGTATGATCATCAAGAATGA+GGG - chr3_3:81172940-81172959 None:intergenic 30.0%
!! GCAGTGTACATTTTATTTAG+CGG - chr3_3:81172991-81173010 None:intergenic 30.0%
TTTGCAAGAATTAAGGGAAT+GGG + chr3_3:81173189-81173208 Msa0477070:CDS 30.0%
ACGAATTTGAGTATATCAAG+GGG - chr3_3:81173264-81173283 None:intergenic 30.0%
TTTGAAAAAGGTTCTCAAGA+GGG - chr3_3:81173384-81173403 None:intergenic 30.0%
ATTTGAAAAAGGTTCTCAAG+AGG - chr3_3:81173385-81173404 None:intergenic 30.0%
! GTTTTACAAGTGTACTTTTC+AGG - chr3_3:81173516-81173535 None:intergenic 30.0%
! AGTAATATAATGCTGCTTCT+AGG - chr3_3:81173599-81173618 None:intergenic 30.0%
TTCACAACAAAGAAAGACTA+TGG + chr3_3:81173696-81173715 Msa0477070:CDS 30.0%
ATTCTTGTCATTGAAAAGGT+TGG - chr3_3:81173793-81173812 None:intergenic 30.0%
AGCTATTCTTGTCATTGAAA+AGG - chr3_3:81173797-81173816 None:intergenic 30.0%
! TTAAATTTGTTCACAGGCTT+AGG + chr3_3:81173970-81173989 Msa0477070:intron 30.0%
! TAAATTTGTTCACAGGCTTA+GGG + chr3_3:81173971-81173990 Msa0477070:intron 30.0%
!!! CATTTGTTGTTTTTGCTTCT+TGG - chr3_3:81174133-81174152 None:intergenic 30.0%
!!! GTGTTTTTAGATTAGGTTGA+AGG + chr3_3:81174179-81174198 Msa0477070:three_prime_UTR 30.0%
TACCAAATAACATGGTTGAT+AGG + chr3_3:81174271-81174290 Msa0477070:three_prime_UTR 30.0%
ATCCTATCAACCATGTTATT+TGG - chr3_3:81174276-81174295 None:intergenic 30.0%
TTAATGTATCTGCTCAACAT+AGG - chr3_3:81174812-81174831 None:intergenic 30.0%
GCAGATACATTAACATTATC+TGG + chr3_3:81174819-81174838 Msa0477070:three_prime_UTR 30.0%
CTATTAAGACTCTGTGTGTT+TGG + chr3_3:81167511-81167530 Msa0477070:five_prime_UTR 35.0%
AATTTGAACACTGTCCAACA+TGG + chr3_3:81167535-81167554 Msa0477070:exon 35.0%
ATTTGAACACTGTCCAACAT+GGG + chr3_3:81167536-81167555 Msa0477070:exon 35.0%
!!! TCTCGTTTTTTATCTCCTCA+AGG - chr3_3:81167571-81167590 None:intergenic 35.0%
AAAAAACGAGAACGTTGATC+TGG + chr3_3:81167580-81167599 Msa0477070:CDS 35.0%
! CTGTGTTTACATTTTCTGCA+TGG + chr3_3:81167642-81167661 Msa0477070:intron 35.0%
TTCACAGCACTTTGTGATAT+AGG + chr3_3:81167869-81167888 Msa0477070:intron 35.0%
AGCACTTTGTGATATAGGAA+GGG + chr3_3:81167874-81167893 Msa0477070:intron 35.0%
TGAATTACAAGTGCCTAAAG+AGG - chr3_3:81167998-81168017 None:intergenic 35.0%
ATGACACACAACTTAGGTTT+AGG - chr3_3:81168432-81168451 None:intergenic 35.0%
GGTTTAATGACACACAACTT+AGG - chr3_3:81168438-81168457 None:intergenic 35.0%
AGTGTTTGGTCCAAACAAAT+TGG + chr3_3:81168823-81168842 Msa0477070:CDS 35.0%
TTATGTGGAACCCTTTATCA+TGG + chr3_3:81168885-81168904 Msa0477070:CDS 35.0%
TATGTGGAACCCTTTATCAT+GGG + chr3_3:81168886-81168905 Msa0477070:CDS 35.0%
CTTCCATAACCCATGATAAA+GGG - chr3_3:81168898-81168917 None:intergenic 35.0%
!!! GTTATATGCTTGTTTTGAGG+CGG + chr3_3:81169281-81169300 Msa0477070:intron 35.0%
TGGAGAGTAAATACGCAAAT+TGG + chr3_3:81169484-81169503 Msa0477070:intron 35.0%
GAATCAAAGTGAATAGTGCT+AGG + chr3_3:81169651-81169670 Msa0477070:intron 35.0%
!! AACATGTAGGTTCTAAGAGA+TGG + chr3_3:81169891-81169910 Msa0477070:intron 35.0%
! TGAAGAAGATGCTGCAATTT+TGG + chr3_3:81169923-81169942 Msa0477070:CDS 35.0%
TAATGCTGATGATATCACCT+GGG - chr3_3:81169950-81169969 None:intergenic 35.0%
TTAATGCTGATGATATCACC+TGG - chr3_3:81169951-81169970 None:intergenic 35.0%
! TCTGGTTCAACTGTTAAGAA+AGG + chr3_3:81170092-81170111 Msa0477070:CDS 35.0%
! TTTTGGTAAAGCTGCTCATT+TGG + chr3_3:81170157-81170176 Msa0477070:CDS 35.0%
! AGACGGAATTGACAATCTTT+TGG + chr3_3:81170313-81170332 Msa0477070:CDS 35.0%
!!! CTTTTGGTTCTATTGATTGG+AGG + chr3_3:81170329-81170348 Msa0477070:CDS 35.0%
AAAACAGTTGGCATAGCAAT+TGG - chr3_3:81170359-81170378 None:intergenic 35.0%
ATGGTAACAGACAAAACAGT+TGG - chr3_3:81170371-81170390 None:intergenic 35.0%
! AACTGTTTTGTCTGTTACCA+TGG + chr3_3:81170370-81170389 Msa0477070:CDS 35.0%
AAAGAGAATGACAGCTATTG+AGG + chr3_3:81170433-81170452 Msa0477070:CDS 35.0%
AATGACAGCTATTGAGGAAA+TGG + chr3_3:81170439-81170458 Msa0477070:CDS 35.0%
! CTTGATTGAGGTTTTTGCTA+AGG + chr3_3:81170532-81170551 Msa0477070:CDS 35.0%
ACCAGAAAGATGTAGCATTT+AGG - chr3_3:81170678-81170697 None:intergenic 35.0%
!!! CTGGTAACTTTTTTGTCAGT+AGG + chr3_3:81170693-81170712 Msa0477070:intron 35.0%
AGGAATCAAACTCAATACCT+CGG + chr3_3:81170713-81170732 Msa0477070:intron 35.0%
TATCAGAAAGATAGACCACT+GGG - chr3_3:81170787-81170806 None:intergenic 35.0%
TCTTGTCTACAGGATTGAAT+GGG - chr3_3:81170903-81170922 None:intergenic 35.0%
AATTGGCATAGATCTAGCAA+AGG + chr3_3:81170955-81170974 Msa0477070:CDS 35.0%
AACAAATAGTTTACCTGCTC+AGG - chr3_3:81170985-81171004 None:intergenic 35.0%
TCATCTTAACATTCACACCA+AGG - chr3_3:81171405-81171424 None:intergenic 35.0%
ATCATGCAGCTTAAACATTG+TGG + chr3_3:81171476-81171495 Msa0477070:intron 35.0%
! TGTGGATTTTCTCATTCTCT+AGG + chr3_3:81171494-81171513 Msa0477070:intron 35.0%
TATCCATCTTCTTCATTGCT+CGG + chr3_3:81171575-81171594 Msa0477070:CDS 35.0%
TTCTCAATCAACTCATCAAC+TGG - chr3_3:81171632-81171651 None:intergenic 35.0%
!! AGTTGATGAGTTGATTGAGA+AGG + chr3_3:81171631-81171650 Msa0477070:CDS 35.0%
CATAACCATCATTGTTGTGA+AGG - chr3_3:81171690-81171709 None:intergenic 35.0%
CAAGAGAGGAAACATATATG+TGG + chr3_3:81171820-81171839 Msa0477070:CDS 35.0%
CAGTATAGTTCTTCATCCTT+TGG - chr3_3:81172011-81172030 None:intergenic 35.0%
GTCAATTACCATTCGTATTG+TGG + chr3_3:81172126-81172145 Msa0477070:CDS 35.0%
CAATGAACATGAAACCAAAC+TGG - chr3_3:81172280-81172299 None:intergenic 35.0%
ATAATGGTACCTAGTAACAG+GGG - chr3_3:81172442-81172461 None:intergenic 35.0%
CATAATGGTACCTAGTAACA+GGG - chr3_3:81172443-81172462 None:intergenic 35.0%
TCATAATGGTACCTAGTAAC+AGG - chr3_3:81172444-81172463 None:intergenic 35.0%
! TAATGACAGTGGTGTTTTTC+TGG + chr3_3:81172563-81172582 Msa0477070:CDS 35.0%
CTACTAGGAGATACTATTGA+GGG - chr3_3:81172639-81172658 None:intergenic 35.0%
AACACGACTTCTATTATTGC+AGG + chr3_3:81172680-81172699 Msa0477070:intron 35.0%
CTATTATTGCAGGACAAGTT+TGG + chr3_3:81172690-81172709 Msa0477070:intron 35.0%
!! AATACTGACTTGTAGGTAGA+GGG - chr3_3:81172757-81172776 None:intergenic 35.0%
!! TAATACTGACTTGTAGGTAG+AGG - chr3_3:81172758-81172777 None:intergenic 35.0%
!! CAATCATAAAAGCACCCAAT+AGG - chr3_3:81172848-81172867 None:intergenic 35.0%
GTGTATGATCATCAAGAATG+AGG - chr3_3:81172941-81172960 None:intergenic 35.0%
!! GTGTACATTTTATTTAGCGG+TGG - chr3_3:81172988-81173007 None:intergenic 35.0%
AATTGTGTTACCAGCTGATA+AGG - chr3_3:81173096-81173115 None:intergenic 35.0%
TTGGAGCTTTGCAAGAATTA+AGG + chr3_3:81173182-81173201 Msa0477070:CDS 35.0%
TGGAGCTTTGCAAGAATTAA+GGG + chr3_3:81173183-81173202 Msa0477070:CDS 35.0%
CTTTGCAAGAATTAAGGGAA+TGG + chr3_3:81173188-81173207 Msa0477070:CDS 35.0%
AAGAATTAAGGGAATGGGAT+GGG + chr3_3:81173194-81173213 Msa0477070:CDS 35.0%
CGAATTTGAGTATATCAAGG+GGG - chr3_3:81173263-81173282 None:intergenic 35.0%
! GAGGGTCTTGTATTAAGATA+CGG - chr3_3:81173366-81173385 None:intergenic 35.0%
TCAATGACAAGAATAGCTAC+AGG + chr3_3:81173799-81173818 Msa0477070:CDS 35.0%
CAATGACAAGAATAGCTACA+GGG + chr3_3:81173800-81173819 Msa0477070:CDS 35.0%
AGCAAAAACAACAAATGCAG+TGG + chr3_3:81174136-81174155 Msa0477070:three_prime_UTR 35.0%
AGAGGAGATACTATTCTCTT+AGG + chr3_3:81174248-81174267 Msa0477070:three_prime_UTR 35.0%
CTCTTAGGTACCAAATAACA+TGG + chr3_3:81174263-81174282 Msa0477070:three_prime_UTR 35.0%
TTGAACGACATTAGTAGTCA+AGG - chr3_3:81174391-81174410 None:intergenic 35.0%
TCTAGCCTAAAAACAGTGAA+AGG + chr3_3:81174455-81174474 Msa0477070:three_prime_UTR 35.0%
CTAGCCTAAAAACAGTGAAA+GGG + chr3_3:81174456-81174475 Msa0477070:three_prime_UTR 35.0%
ATAAAAACTCATGTGTTGCG+AGG - chr3_3:81174550-81174569 None:intergenic 35.0%
CAATATCAAGGATTGTGATG+TGG + chr3_3:81174583-81174602 Msa0477070:three_prime_UTR 35.0%
TTCCTTCTTTGTTGCAGTAA+GGG - chr3_3:81174640-81174659 None:intergenic 35.0%
TTTCCTTCTTTGTTGCAGTA+AGG - chr3_3:81174641-81174660 None:intergenic 35.0%
!! TGCATCTCACTTTTGTTTCT+TGG + chr3_3:81174754-81174773 Msa0477070:three_prime_UTR 35.0%
!! GGATTGATTTTTCCTCTCAT+TGG - chr3_3:81174791-81174810 None:intergenic 35.0%
CAGCACTTTGTGATATAGGA+AGG + chr3_3:81167873-81167892 Msa0477070:intron 40.0%
TGCATTCACCAATCCTCTTT+AGG + chr3_3:81167982-81168001 Msa0477070:intron 40.0%
TACAAGTGCCTAAAGAGGAT+TGG - chr3_3:81167993-81168012 None:intergenic 40.0%
AGCCAGTTCACCTATTAGTT+TGG + chr3_3:81168252-81168271 Msa0477070:intron 40.0%
GACCAAACTAATAGGTGAAC+TGG - chr3_3:81168257-81168276 None:intergenic 40.0%
! GAACCCTTTATCATGGGTTA+TGG + chr3_3:81168892-81168911 Msa0477070:CDS 40.0%
GCTTCCATAACCCATGATAA+AGG - chr3_3:81168899-81168918 None:intergenic 40.0%
TATGGAAGCTGCTGCTATTA+TGG + chr3_3:81168910-81168929 Msa0477070:CDS 40.0%
TGCTATTATGGCCATTGCTT+TGG + chr3_3:81168922-81168941 Msa0477070:CDS 40.0%
AATATTTCAAAACGGCCCCT+AGG - chr3_3:81169733-81169752 None:intergenic 40.0%
!! TGTAGGTTCTAAGAGATGGT+AGG + chr3_3:81169895-81169914 Msa0477070:intron 40.0%
GTTGATCAGTCTGCTTTAAC+CGG + chr3_3:81170026-81170045 Msa0477070:CDS 40.0%
TTTAACCGGAGAATCTCTTC+CGG + chr3_3:81170040-81170059 Msa0477070:CDS 40.0%
CCAGAAAACACTTCATCTGA+GGG - chr3_3:81170077-81170096 None:intergenic 40.0%
ACCAGAAAACACTTCATCTG+AGG - chr3_3:81170078-81170097 None:intergenic 40.0%
!!! ACTGGAGTGCACACATTTTT+TGG + chr3_3:81170140-81170159 Msa0477070:CDS 40.0%
CTGAAAGTGACCAACTTGAT+TGG - chr3_3:81170192-81170211 None:intergenic 40.0%
CAGAAAGTCCTAACAGCAAT+TGG + chr3_3:81170209-81170228 Msa0477070:CDS 40.0%
TGCATTTGCTCAATTGCTGT+TGG + chr3_3:81170239-81170258 Msa0477070:CDS 40.0%
!! CTATACTTGCGGTGTTGTAT+CGG - chr3_3:81170293-81170312 None:intergenic 40.0%
CAATTCCGTCTCTATACTTG+CGG - chr3_3:81170304-81170323 None:intergenic 40.0%
TTGTCTGTTACCATGGCTAT+TGG + chr3_3:81170377-81170396 Msa0477070:CDS 40.0%
TCTCACAGACTTTCTCAACA+AGG + chr3_3:81170401-81170420 Msa0477070:CDS 40.0%
!! TTTTGCTAAGGGTGTAGAGA+AGG + chr3_3:81170544-81170563 Msa0477070:CDS 40.0%
ATGTTATCCTTCTTGCAGCA+AGG + chr3_3:81170570-81170589 Msa0477070:CDS 40.0%
TGTTATCCTTCTTGCAGCAA+GGG + chr3_3:81170571-81170590 Msa0477070:CDS 40.0%
GCCTAAATGCTACATCTTTC+TGG + chr3_3:81170674-81170693 Msa0477070:intron 40.0%
GGAATCAAACTCAATACCTC+GGG + chr3_3:81170714-81170733 Msa0477070:intron 40.0%
GAATCAAACTCAATACCTCG+GGG + chr3_3:81170715-81170734 Msa0477070:intron 40.0%
ATCAGAAAGATAGACCACTG+GGG - chr3_3:81170786-81170805 None:intergenic 40.0%
GTATCAGAAAGATAGACCAC+TGG - chr3_3:81170788-81170807 None:intergenic 40.0%
CTCTTGTCTACAGGATTGAA+TGG - chr3_3:81170904-81170923 None:intergenic 40.0%
AAAGCAGTTCTCTTGTCTAC+AGG - chr3_3:81170913-81170932 None:intergenic 40.0%
!! ACATTGACTCTGACGGAAAT+TGG + chr3_3:81170938-81170957 Msa0477070:CDS 40.0%
GGGCTATCTTTATCTTTCTC+AGG - chr3_3:81171295-81171314 None:intergenic 40.0%
GAGAAAGATAAAGATAGCCC+TGG + chr3_3:81171295-81171314 Msa0477070:CDS 40.0%
AACAGACCAACAAATTGCCA+TGG - chr3_3:81171325-81171344 None:intergenic 40.0%
TACCTCTATTTGATCCTCCT+AGG + chr3_3:81171344-81171363 Msa0477070:CDS 40.0%
TAGGTCCTTCACAACAATGA+TGG + chr3_3:81171682-81171701 Msa0477070:intron 40.0%
TCGTAAAGAAACTGCAAGAG+AGG + chr3_3:81171806-81171825 Msa0477070:CDS 40.0%
ATATGTGGAATGACAGGTGA+TGG + chr3_3:81171835-81171854 Msa0477070:CDS 40.0%
ATATCTGCTCTCTTTAACGC+AGG - chr3_3:81171874-81171893 None:intergenic 40.0%
GCGTTAAAGAGAGCAGATAT+TGG + chr3_3:81171874-81171893 Msa0477070:CDS 40.0%
!! AATATCAGAAGCACCTCTAG+CGG - chr3_3:81171926-81171945 None:intergenic 40.0%
CTAATAATGACACTCAGACC+AGG - chr3_3:81171961-81171980 None:intergenic 40.0%
! CAAGCAGAGCAATTTTCCAA+AGG + chr3_3:81171992-81172011 Msa0477070:CDS 40.0%
TGCACTTACCACAATACGAA+TGG - chr3_3:81172137-81172156 None:intergenic 40.0%
TCATGTTCATTGCCTTGATC+TGG + chr3_3:81172288-81172307 Msa0477070:CDS 40.0%
!! GTTTGATTTTGCACCCTTCA+TGG + chr3_3:81172313-81172332 Msa0477070:CDS 40.0%
AGATGGTTTCACTCTATCCT+TGG - chr3_3:81172473-81172492 None:intergenic 40.0%
! CTGAGAGAGATATTTGCTAC+TGG + chr3_3:81172514-81172533 Msa0477070:CDS 40.0%
!! GAAGGATACCGATTTCTTCT+CGG + chr3_3:81172591-81172610 Msa0477070:CDS 40.0%
GCTACTAGGAGATACTATTG+AGG - chr3_3:81172640-81172659 None:intergenic 40.0%
! AGGCACTAATTTTTGTCACC+AGG + chr3_3:81172784-81172803 Msa0477070:CDS 40.0%
TTTCAACAAAGGACCAGCTA+CGG - chr3_3:81172812-81172831 None:intergenic 40.0%
AAGACCAGGTCTTTCAACAA+AGG - chr3_3:81172823-81172842 None:intergenic 40.0%
! TGCTTTTATGATTGCTCAGC+TGG + chr3_3:81172854-81172873 Msa0477070:CDS 40.0%
!! ATTTTATTTAGCGGTGGTCG+TGG - chr3_3:81172982-81173001 None:intergenic 40.0%
AGTTACACTTCTGTTGCCTT+AGG + chr3_3:81173038-81173057 Msa0477070:intron 40.0%
CAAGAATTAAGGGAATGGGA+TGG + chr3_3:81173193-81173212 Msa0477070:CDS 40.0%
AGAATTAAGGGAATGGGATG+GGG + chr3_3:81173195-81173214 Msa0477070:CDS 40.0%
! GTAATCCGCTATGTTCTAAG+TGG + chr3_3:81173282-81173301 Msa0477070:CDS 40.0%
! CTTTGCCACTTAGAACATAG+CGG - chr3_3:81173290-81173309 None:intergenic 40.0%
! ATGTTCTAAGTGGCAAAGCT+TGG + chr3_3:81173292-81173311 Msa0477070:CDS 40.0%
! TGTTCTAAGTGGCAAAGCTT+GGG + chr3_3:81173293-81173312 Msa0477070:CDS 40.0%
CAAAGCTTGGGATAATCTTC+TGG + chr3_3:81173305-81173324 Msa0477070:CDS 40.0%
! GGATAATCTTCTGGAGAACA+AGG + chr3_3:81173314-81173333 Msa0477070:CDS 40.0%
! GGTCTTGTATTAAGATACGG+AGG - chr3_3:81173363-81173382 None:intergenic 40.0%
!! ATAATGCTGCTTCTAGGACT+CGG - chr3_3:81173593-81173612 None:intergenic 40.0%
! TTGAAAAGGTTGGTTGTGTC+AGG - chr3_3:81173783-81173802 None:intergenic 40.0%
GAATCAGTCGTGAAGCTTAA+GGG + chr3_3:81174020-81174039 Msa0477070:CDS 40.0%
GACAACCTTCAAGAAGAACA+GGG + chr3_3:81174091-81174110 Msa0477070:three_prime_UTR 40.0%
ATAGTATCTCCTCTAGCTAG+TGG - chr3_3:81174242-81174261 None:intergenic 40.0%
GCTAGACATGAAGTCAGAAA+AGG - chr3_3:81174441-81174460 None:intergenic 40.0%
!! CTCACCCTTTCACTGTTTTT+AGG - chr3_3:81174463-81174482 None:intergenic 40.0%
AACCCTTACTGCAACAAAGA+AGG + chr3_3:81174635-81174654 Msa0477070:three_prime_UTR 40.0%
GTTTAGTCGTAACCAATGAG+AGG + chr3_3:81174776-81174795 Msa0477070:three_prime_UTR 40.0%
!! AGCGGTTGGTTTGAGTCATA+GGG - chr3_3:81167375-81167394 None:intergenic 45.0%
TACTGAGTGATGCAGAGTCA+TGG - chr3_3:81167472-81167491 None:intergenic 45.0%
TTTGTGATATAGGAAGGGCG+TGG + chr3_3:81167879-81167898 Msa0477070:intron 45.0%
TCAGGAACGAATTCCAGTAG+AGG + chr3_3:81168733-81168752 Msa0477070:intron 45.0%
CAGCTGAAATGTTCAAGAGC+AGG + chr3_3:81168767-81168786 Msa0477070:CDS 45.0%
GCAGGTTTAACATCAGACGA+AGG + chr3_3:81168785-81168804 Msa0477070:CDS 45.0%
ACCAAACACTTGAAGCCTGT+TGG - chr3_3:81168813-81168832 None:intergenic 45.0%
ATGGCCATTGCTTTGGCTAA+TGG + chr3_3:81168929-81168948 Msa0477070:CDS 45.0%
ACAAAATCCTGCCAATCAGG+AGG - chr3_3:81168965-81168984 None:intergenic 45.0%
CCAACAAAATCCTGCCAATC+AGG - chr3_3:81168968-81168987 None:intergenic 45.0%
! CCTGATTGGCAGGATTTTGT+TGG + chr3_3:81168965-81168984 Msa0477070:CDS 45.0%
TGGTTTAGCCCCCAAAACAA+GGG + chr3_3:81169072-81169091 Msa0477070:CDS 45.0%
!! AGGTTCTAAGAGATGGTAGG+TGG + chr3_3:81169898-81169917 Msa0477070:intron 45.0%
TCTGAGGGATTCTTTGTTGC+CGG - chr3_3:81170062-81170081 None:intergenic 45.0%
!! CCCTCAGATGAAGTGTTTTC+TGG + chr3_3:81170074-81170093 Msa0477070:CDS 45.0%
GAAGCAGTTGTCATTGCTAC+TGG + chr3_3:81170122-81170141 Msa0477070:CDS 45.0%
GTTGACAGCACCAATCAAGT+TGG + chr3_3:81170179-81170198 Msa0477070:CDS 45.0%
CAACACCGCAAGTATAGAGA+CGG + chr3_3:81170296-81170315 Msa0477070:CDS 45.0%
TCTGTGAGAACCAATAGCCA+TGG - chr3_3:81170390-81170409 None:intergenic 45.0%
ACAGCTATTGAGGAAATGGC+AGG + chr3_3:81170443-81170462 Msa0477070:CDS 45.0%
CAGCTATTGAGGAAATGGCA+GGG + chr3_3:81170444-81170463 Msa0477070:CDS 45.0%
TATTGAGGAAATGGCAGGGA+TGG + chr3_3:81170448-81170467 Msa0477070:CDS 45.0%
GCCATAGATGCTGCAATTGT+TGG + chr3_3:81170617-81170636 Msa0477070:CDS 45.0%
GCCAACAATTGCAGCATCTA+TGG - chr3_3:81170621-81170640 None:intergenic 45.0%
! GGGTGTTATAATAAACCCCG+AGG - chr3_3:81170733-81170752 None:intergenic 45.0%
GTCTAGCAACACCCAAAGAA+CGG - chr3_3:81171166-81171185 None:intergenic 45.0%
!! TTCTTTGGGTGTTGCTAGAC+AGG + chr3_3:81171166-81171185 Msa0477070:CDS 45.0%
TGCCTAGGAGGATCAAATAG+AGG - chr3_3:81171349-81171368 None:intergenic 45.0%
GTTTCAGCACTATCATGCCT+AGG - chr3_3:81171364-81171383 None:intergenic 45.0%
AAGGTTCAGAGCTCTTGTGA+TGG - chr3_3:81171386-81171405 None:intergenic 45.0%
!! ATCACAAGAGCTCTGAACCT+TGG + chr3_3:81171385-81171404 Msa0477070:CDS 45.0%
TTGTTCCCATTCCAAGCCTT+CGG - chr3_3:81171550-81171569 None:intergenic 45.0%
TGACCGAGCAATGAAGAAGA+TGG - chr3_3:81171581-81171600 None:intergenic 45.0%
TTCATTGCTCGGTCAAAGCA+AGG + chr3_3:81171586-81171605 Msa0477070:CDS 45.0%
! GAGTTGATTGAGAAGGCTGA+TGG + chr3_3:81171638-81171657 Msa0477070:CDS 45.0%
!!! GGATTTGCTGGAGTTTTTCC+TGG + chr3_3:81171659-81171678 Msa0477070:CDS 45.0%
! TTGCTGGAGTTTTTCCTGGT+AGG + chr3_3:81171663-81171682 Msa0477070:intron 45.0%
ATTGTTGTGAAGGACCTACC+AGG - chr3_3:81171680-81171699 None:intergenic 45.0%
GATATTGTCCTTACTGAGCC+TGG + chr3_3:81171940-81171959 Msa0477070:CDS 45.0%
TTTCCTTCACCCCTGTTACT+AGG + chr3_3:81172430-81172449 Msa0477070:intron 45.0%
AGTTTCCAACTGTCTGGTTG+TGG - chr3_3:81172496-81172515 None:intergenic 45.0%
TCTCTCAGTTTCCAACTGTC+TGG - chr3_3:81172502-81172521 None:intergenic 45.0%
!! TTTGCTACTGGTGTTGTGCT+AGG + chr3_3:81172526-81172545 Msa0477070:CDS 45.0%
TGTTGTGCTAGGTAGCTACA+TGG + chr3_3:81172537-81172556 Msa0477070:CDS 45.0%
CTACATGGCACTAATGACAG+TGG + chr3_3:81172552-81172571 Msa0477070:CDS 45.0%
!!! GGTGTTTTTCTGGCTCATGA+AGG + chr3_3:81172573-81172592 Msa0477070:CDS 45.0%
TTCAACAAAGGACCAGCTAC+GGG - chr3_3:81172811-81172830 None:intergenic 45.0%
TGGTCCTTTGTTGAAAGACC+TGG + chr3_3:81172816-81172835 Msa0477070:CDS 45.0%
! AAGACCTGGTCTTCTCCTAT+TGG + chr3_3:81172830-81172849 Msa0477070:CDS 45.0%
! AGACCTGGTCTTCTCCTATT+GGG + chr3_3:81172831-81172850 Msa0477070:CDS 45.0%
TACGGAGGTAGTAAGACAGA+AGG - chr3_3:81173348-81173367 None:intergenic 45.0%
AAGAAGAGAGAGAAGCTCAG+TGG + chr3_3:81173721-81173740 Msa0477070:CDS 45.0%
AGAAGAGAGAGAAGCTCAGT+GGG + chr3_3:81173722-81173741 Msa0477070:CDS 45.0%
TCATCGAGTCTGTGTCTGAA+AGG + chr3_3:81173877-81173896 Msa0477070:intron 45.0%
TAGGGAGCTTCACACTCTAA+AGG + chr3_3:81173989-81174008 Msa0477070:CDS 45.0%
AGGGAGCTTCACACTCTAAA+GGG + chr3_3:81173990-81174009 Msa0477070:CDS 45.0%
CGAATCAGTCGTGAAGCTTA+AGG + chr3_3:81174019-81174038 Msa0477070:CDS 45.0%
GGACAACCTTCAAGAAGAAC+AGG + chr3_3:81174090-81174109 Msa0477070:three_prime_UTR 45.0%
CGTAACCCTGTTCTTCTTGA+AGG - chr3_3:81174099-81174118 None:intergenic 45.0%
! AAAGGCATGCGACCACAATT+TGG + chr3_3:81174518-81174537 Msa0477070:three_prime_UTR 45.0%
AAGGCATGCGACCACAATTT+GGG + chr3_3:81174519-81174538 Msa0477070:three_prime_UTR 45.0%
!! CAGCGGTTGGTTTGAGTCAT+AGG - chr3_3:81167376-81167395 None:intergenic 50.0%
GTGAAGAAAGGGTGATGCAG+CGG - chr3_3:81167393-81167412 None:intergenic 50.0%
TGAACACTGTCCAACATGGG+AGG + chr3_3:81167539-81167558 Msa0477070:exon 50.0%
AAGGCTGATACCTCCCATGT+TGG - chr3_3:81167552-81167571 None:intergenic 50.0%
! CGTGGCGTGTTCTTGTGTTT+TGG + chr3_3:81167897-81167916 Msa0477070:intron 50.0%
TGCTCGAACACTTCCTCTAC+TGG - chr3_3:81168749-81168768 None:intergenic 50.0%
GCCAACAGGCTTCAAGTGTT+TGG + chr3_3:81168809-81168828 Msa0477070:CDS 50.0%
GCCATTGCTTTGGCTAATGG+CGG + chr3_3:81168932-81168951 Msa0477070:CDS 50.0%
ACCGCCATTAGCCAAAGCAA+TGG - chr3_3:81168936-81168955 None:intergenic 50.0%
ATTGCTTTGGCTAATGGCGG+TGG + chr3_3:81168935-81168954 Msa0477070:CDS 50.0%
TAATGCTGCTGCTGCTCTCA+TGG + chr3_3:81169048-81169067 Msa0477070:CDS 50.0%
CTGGTTTAGCCCCCAAAACA+AGG + chr3_3:81169071-81169090 Msa0477070:CDS 50.0%
!! GATGCTGCAATTTTGGTCCC+AGG + chr3_3:81169930-81169949 Msa0477070:CDS 50.0%
TGTTGCCGGAAGAGATTCTC+CGG - chr3_3:81170048-81170067 None:intergenic 50.0%
GTCCTCTGCAGTGACAAAAC+CGG + chr3_3:81170473-81170492 Msa0477070:CDS 50.0%
!! TTCCGGTTTTGTCACTGCAG+AGG - chr3_3:81170478-81170497 None:intergenic 50.0%
TAGAAGCCCTTGCTGCAAGA+AGG - chr3_3:81170580-81170599 None:intergenic 50.0%
TTCTTGCAGCAAGGGCTTCT+AGG + chr3_3:81170579-81170598 Msa0477070:CDS 50.0%
!! GGCTTCTAGGACTGAGAATC+AGG + chr3_3:81170592-81170611 Msa0477070:CDS 50.0%
! TGGCATGCTTGCTGATCCAA+AGG + chr3_3:81170637-81170656 Msa0477070:CDS 50.0%
! CATGCTTGCTGATCCAAAGG+AGG + chr3_3:81170640-81170659 Msa0477070:CDS 50.0%
GTTGTCGATGTGCAGTGTGT+GGG - chr3_3:81170753-81170772 None:intergenic 50.0%
AGTTGTCGATGTGCAGTGTG+TGG - chr3_3:81170754-81170773 None:intergenic 50.0%
TGAATTACACAGGCACGAGC+TGG + chr3_3:81170856-81170875 Msa0477070:intron 50.0%
GAACCTCTGCAACTGCAAAG+AGG + chr3_3:81171088-81171107 Msa0477070:CDS 50.0%
CATCCTCTTTGCAGTTGCAG+AGG - chr3_3:81171094-81171113 None:intergenic 50.0%
GCAACTGCAAAGAGGATGTC+AGG + chr3_3:81171096-81171115 Msa0477070:CDS 50.0%
CAAATTGCCATGGTGCACCA+GGG - chr3_3:81171315-81171334 None:intergenic 50.0%
ACAAATTGCCATGGTGCACC+AGG - chr3_3:81171316-81171335 None:intergenic 50.0%
GGTGCACCATGGCAATTTGT+TGG + chr3_3:81171316-81171335 Msa0477070:CDS 50.0%
TCAGCACTATCATGCCTAGG+AGG - chr3_3:81171361-81171380 None:intergenic 50.0%
TGATCAGCTTGCCATTGCCA+AGG + chr3_3:81171517-81171536 Msa0477070:CDS 50.0%
CTTGCCATTGCCAAGGAAAC+TGG + chr3_3:81171524-81171543 Msa0477070:CDS 50.0%
!! GAGAAGGCTGATGGATTTGC+TGG + chr3_3:81171647-81171666 Msa0477070:CDS 50.0%
GTACCTAGTAACAGGGGTGA+AGG - chr3_3:81172436-81172455 None:intergenic 50.0%
CAACTGTCTGGTTGTGGAGA+TGG - chr3_3:81172490-81172509 None:intergenic 50.0%
CATCTCCACAACCAGACAGT+TGG + chr3_3:81172488-81172507 Msa0477070:CDS 50.0%
GGGCTGCCATCATTTCATCA+GGG - chr3_3:81172737-81172756 None:intergenic 50.0%
AGGGCTGCCATCATTTCATC+AGG - chr3_3:81172738-81172757 None:intergenic 50.0%
GTGGTCGTGGAGAAGAAATG+AGG - chr3_3:81172969-81172988 None:intergenic 50.0%
TTAAGGGAATGGGATGGGGT+TGG + chr3_3:81173199-81173218 Msa0477070:CDS 50.0%
TAAGGGAATGGGATGGGGTT+GGG + chr3_3:81173200-81173219 Msa0477070:CDS 50.0%
ACTGCTCAGAGGACTCTTCA+TGG + chr3_3:81173747-81173766 Msa0477070:CDS 50.0%
TGCAACTTCAGCACGTCTCT+TGG - chr3_3:81173850-81173869 None:intergenic 50.0%
AGAGACGTGCTGAAGTTGCA+CGG + chr3_3:81173850-81173869 Msa0477070:CDS 50.0%
TCCTCAATGCCACTAGCTAG+AGG + chr3_3:81174230-81174249 Msa0477070:three_prime_UTR 50.0%
TCCTCTAGCTAGTGGCATTG+AGG - chr3_3:81174234-81174253 None:intergenic 50.0%
AACTCATGTGTTGCGAGGTG+CGG - chr3_3:81174545-81174564 None:intergenic 50.0%
TCAAAACCAGCCAACCTGTC+CGG + chr3_3:81174914-81174933 Msa0477070:three_prime_UTR 50.0%
AGAAAGGGTGATGCAGCGGT+TGG - chr3_3:81167389-81167408 None:intergenic 55.0%
!! CATGGGAGGTATCAGCCTTG+AGG + chr3_3:81167553-81167572 Msa0477070:exon 55.0%
CATCAGACGAAGGAGCCAAC+AGG + chr3_3:81168795-81168814 Msa0477070:CDS 55.0%
TGGAAGACCTCCTGATTGGC+AGG + chr3_3:81168955-81168974 Msa0477070:CDS 55.0%
TCAAGCAGACGAGCATCAGC+AGG - chr3_3:81169990-81170009 None:intergenic 55.0%
TGCTGATGCTCGTCTGCTTG+AGG + chr3_3:81169989-81170008 Msa0477070:CDS 55.0%
GCTGATGCTCGTCTGCTTGA+GGG + chr3_3:81169990-81170009 Msa0477070:CDS 55.0%
!! TAGCAAAGGTGCTCCTGAGC+AGG + chr3_3:81170969-81170988 Msa0477070:CDS 55.0%
ATTGACAAGTTCGCCGAGCG+TGG + chr3_3:81171137-81171156 Msa0477070:CDS 55.0%
CAAAGAACGGAGTCCACGCT+CGG - chr3_3:81171153-81171172 None:intergenic 55.0%
GAGCGTGGACTCCGTTCTTT+GGG + chr3_3:81171152-81171171 Msa0477070:CDS 55.0%
AAGATAGCCCTGGTGCACCA+TGG + chr3_3:81171305-81171324 Msa0477070:CDS 55.0%
TCGGCCAGTTTCCTTGGCAA+TGG - chr3_3:81171531-81171550 None:intergenic 55.0%
TTGCCAAGGAAACTGGCCGA+AGG + chr3_3:81171531-81171550 Msa0477070:CDS 55.0%
AAGCCTTCGGCCAGTTTCCT+TGG - chr3_3:81171537-81171556 None:intergenic 55.0%
AAGGAAACTGGCCGAAGGCT+TGG + chr3_3:81171536-81171555 Msa0477070:CDS 55.0%
AACTGGCCGAAGGCTTGGAA+TGG + chr3_3:81171541-81171560 Msa0477070:CDS 55.0%
ACTGGCCGAAGGCTTGGAAT+GGG + chr3_3:81171542-81171561 Msa0477070:CDS 55.0%
GATGCTACAGATGCCGCTAG+AGG + chr3_3:81171910-81171929 Msa0477070:CDS 55.0%
CACTCAGACCAGGCTCAGTA+AGG - chr3_3:81171951-81171970 None:intergenic 55.0%
GCACCCAATAGGAGAAGACC+AGG - chr3_3:81172837-81172856 None:intergenic 55.0%
CTAGGAGCTGCCTTATCAGC+TGG + chr3_3:81173083-81173102 Msa0477070:intron 55.0%
TGTGGCTGCAGCTGTTATCG+CGG + chr3_3:81174601-81174620 Msa0477070:three_prime_UTR 55.0%
GAAACGGTAACCGGACAGGT+TGG - chr3_3:81174927-81174946 None:intergenic 55.0%
GCGGTGGAAGACCTCCTGAT+TGG + chr3_3:81168951-81168970 Msa0477070:CDS 60.0%
CAACTTGCGCTAGACCCCAG+TGG + chr3_3:81170769-81170788 Msa0477070:intron 60.0%
! ACAGGCACGAGCTGGTGTCA+GGG + chr3_3:81170864-81170883 Msa0477070:intron 60.0%
CGAGCGTGGACTCCGTTCTT+TGG + chr3_3:81171151-81171170 Msa0477070:CDS 60.0%
TTGTCACCAGGTCCCGTAGC+TGG + chr3_3:81172796-81172815 Msa0477070:CDS 60.0%
AAAGGACCAGCTACGGGACC+TGG - chr3_3:81172805-81172824 None:intergenic 60.0%
!! GGGGTTGGGCTGGTGTAATC+TGG + chr3_3:81173214-81173233 Msa0477070:CDS 60.0%
CTCAGTGGGCAACTGCTCAG+AGG + chr3_3:81173736-81173755 Msa0477070:CDS 60.0%
GCTGCTGCTGCTCTCATGGC+TGG + chr3_3:81169052-81169071 Msa0477070:CDS 65.0%
CACAGGCACGAGCTGGTGTC+AGG + chr3_3:81170863-81170882 Msa0477070:intron 65.0%
GGAATGGGATGGGGTTGGGC+TGG + chr3_3:81173204-81173223 Msa0477070:CDS 65.0%
GCGAGGTGCGGCCCAAATTG+TGG - chr3_3:81174533-81174552 None:intergenic 65.0%
GGCTGCAGCTGTTATCGCGG+TGG + chr3_3:81174604-81174623 Msa0477070:three_prime_UTR 65.0%
! CGGTAACCGGACAGGTTGGC+TGG - chr3_3:81174923-81174942 None:intergenic 65.0%
! GGCACGAGCTGGTGTCAGGG+AGG + chr3_3:81170867-81170886 Msa0477070:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 81167348 81174947 81167348 ID=Msa0477070;Name=Msa0477070
chr3_3 mRNA 81167348 81174947 81167348 ID=Msa0477070-mRNA-1;Parent=Msa0477070;Name=Msa0477070-mRNA-1;_AED=0.07;_eAED=0.07;_QI=206|1|1|1|1|1|15|865|951
chr3_3 exon 81167348 81167601 81167348 ID=Msa0477070-mRNA-1:exon:22302;Parent=Msa0477070-mRNA-1
chr3_3 exon 81168737 81169093 81168737 ID=Msa0477070-mRNA-1:exon:22303;Parent=Msa0477070-mRNA-1
chr3_3 exon 81169900 81170661 81169900 ID=Msa0477070-mRNA-1:exon:22304;Parent=Msa0477070-mRNA-1
chr3_3 exon 81170868 81170990 81170868 ID=Msa0477070-mRNA-1:exon:22305;Parent=Msa0477070-mRNA-1
chr3_3 exon 81171083 81171187 81171083 ID=Msa0477070-mRNA-1:exon:22306;Parent=Msa0477070-mRNA-1
chr3_3 exon 81171286 81171430 81171286 ID=Msa0477070-mRNA-1:exon:22307;Parent=Msa0477070-mRNA-1
chr3_3 exon 81171516 81171680 81171516 ID=Msa0477070-mRNA-1:exon:22308;Parent=Msa0477070-mRNA-1
chr3_3 exon 81171791 81172029 81171791 ID=Msa0477070-mRNA-1:exon:22309;Parent=Msa0477070-mRNA-1
chr3_3 exon 81172115 81172147 81172115 ID=Msa0477070-mRNA-1:exon:22310;Parent=Msa0477070-mRNA-1
chr3_3 exon 81172281 81172362 81172281 ID=Msa0477070-mRNA-1:exon:22311;Parent=Msa0477070-mRNA-1
chr3_3 exon 81172452 81172612 81172452 ID=Msa0477070-mRNA-1:exon:22312;Parent=Msa0477070-mRNA-1
chr3_3 exon 81172702 81172875 81172702 ID=Msa0477070-mRNA-1:exon:22313;Parent=Msa0477070-mRNA-1
chr3_3 exon 81173153 81173335 81173153 ID=Msa0477070-mRNA-1:exon:22314;Parent=Msa0477070-mRNA-1
chr3_3 exon 81173690 81173871 81173690 ID=Msa0477070-mRNA-1:exon:22315;Parent=Msa0477070-mRNA-1
chr3_3 exon 81173986 81174947 81173986 ID=Msa0477070-mRNA-1:exon:22316;Parent=Msa0477070-mRNA-1
chr3_3 five_prime_UTR 81167348 81167553 81167348 ID=Msa0477070-mRNA-1:five_prime_utr;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81167554 81167601 81167554 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81168737 81169093 81168737 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81169900 81170661 81169900 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81170868 81170990 81170868 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81171083 81171187 81171083 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81171286 81171430 81171286 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81171516 81171680 81171516 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81171791 81172029 81171791 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81172115 81172147 81172115 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81172281 81172362 81172281 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81172452 81172612 81172452 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81172702 81172875 81172702 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81173153 81173335 81173153 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81173690 81173871 81173690 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 CDS 81173986 81174082 81173986 ID=Msa0477070-mRNA-1:cds;Parent=Msa0477070-mRNA-1
chr3_3 three_prime_UTR 81174083 81174947 81174083 ID=Msa0477070-mRNA-1:three_prime_utr;Parent=Msa0477070-mRNA-1
Gene Sequence

>Msa0477070

ATGGGAGGTATCAGCCTTGAGGAGATAAAAAACGAGAACGTTGATCTGGAACGAATTCCAGTAGAGGAAGTGTTCGAGCAGCTGAAATGTTCAAGAGCAGGTTTAACATCAGACGAAGGAGCCAACAGGCTTCAAGTGTTTGGTCCAAACAAATTGGAAGAGAAAAGGGAAAGCAAATTTTTGAAGTTCTTAGGATTTATGTGGAACCCTTTATCATGGGTTATGGAAGCTGCTGCTATTATGGCCATTGCTTTGGCTAATGGCGGTGGAAGACCTCCTGATTGGCAGGATTTTGTTGGTATCATTTCTCTTTTGGTTATTAACTCAACTATCAGTTTCATTGAAGAGAATAATGCTGGTAATGCTGCTGCTGCTCTCATGGCTGGTTTAGCCCCCAAAACAAGGGTTCTAAGAGATGGTAGGTGGTCTGAAGAAGATGCTGCAATTTTGGTCCCAGGTGATATCATCAGCATTAAATTAGGAGATATCATTCCTGCTGATGCTCGTCTGCTTGAGGGTGATGCTTTGAGTGTTGATCAGTCTGCTTTAACCGGAGAATCTCTTCCGGCAACAAAGAATCCCTCAGATGAAGTGTTTTCTGGTTCAACTGTTAAGAAAGGTGAGATTGAAGCAGTTGTCATTGCTACTGGAGTGCACACATTTTTTGGTAAAGCTGCTCATTTGGTTGACAGCACCAATCAAGTTGGTCACTTTCAGAAAGTCCTAACAGCAATTGGTAATTTCTGCATTTGCTCAATTGCTGTTGGAATACTGATTGAGCTCGTTGTCATGTATCCGATACAACACCGCAAGTATAGAGACGGAATTGACAATCTTTTGGTTCTATTGATTGGAGGAATTCCAATTGCTATGCCAACTGTTTTGTCTGTTACCATGGCTATTGGTTCTCACAGACTTTCTCAACAAGGTGCTATTACAAAGAGAATGACAGCTATTGAGGAAATGGCAGGGATGGATGTCCTCTGCAGTGACAAAACCGGAACTCTGACTTTAAATAAGTTATCTGTTGATAAAAACTTGATTGAGGTTTTTGCTAAGGGTGTAGAGAAGGATTATGTTATCCTTCTTGCAGCAAGGGCTTCTAGGACTGAGAATCAGGATGCCATAGATGCTGCAATTGTTGGCATGCTTGCTGATCCAAAGGAGGCACGAGCTGGTGTCAGGGAGGTTCATTTTTTCCCATTCAATCCTGTAGACAAGAGAACTGCTTTAACTTACATTGACTCTGACGGAAATTGGCATAGATCTAGCAAAGGTGCTCCTGAGCAGATATTGAACCTCTGCAACTGCAAAGAGGATGTCAGGAAAAAAGCTCATTCAACAATTGACAAGTTCGCCGAGCGTGGACTCCGTTCTTTGGGTGTTGCTAGACAGGAAATACCTGAGAAAGATAAAGATAGCCCTGGTGCACCATGGCAATTTGTTGGTCTGTTACCTCTATTTGATCCTCCTAGGCATGATAGTGCTGAAACCATCACAAGAGCTCTGAACCTTGGTGTGAATGTTAAGATGATTACTGGTGATCAGCTTGCCATTGCCAAGGAAACTGGCCGAAGGCTTGGAATGGGAACAAACATGTATCCATCTTCTTCATTGCTCGGTCAAAGCAAGGATGCTGCTGTTTCAGCTCTTCCAGTTGATGAGTTGATTGAGAAGGCTGATGGATTTGCTGGAGTTTTTCCTGAACACAAGTATGAAATCGTAAAGAAACTGCAAGAGAGGAAACATATATGTGGAATGACAGGTGATGGTGTCAACGACGCTCCTGCGTTAAAGAGAGCAGATATTGGAATTGCTGTTGCTGATGCTACAGATGCCGCTAGAGGTGCTTCTGATATTGTCCTTACTGAGCCTGGTCTGAGTGTCATTATTAGTGCAGTGCTCACAAGCAGAGCAATTTTCCAAAGGATGAAGAACTATACTATCTACGCTGTGTCAATTACCATTCGTATTGTGTTTGGTTTCATGTTCATTGCCTTGATCTGGAAGTTTGATTTTGCACCCTTCATGGTGTTGATTATCGCCATACTAAATGATGGTACCATTATGACAATATCCAAGGATAGAGTGAAACCATCTCCACAACCAGACAGTTGGAAACTGAGAGAGATATTTGCTACTGGTGTTGTGCTAGGTAGCTACATGGCACTAATGACAGTGGTGTTTTTCTGGCTCATGAAGGATACCGATTTCTTCTCGGACAAGTTTGGTGTGAGATCTATCCGAAAAAACCCTGATGAAATGATGGCAGCCCTCTACCTACAAGTCAGTATTATAAGTCAGGCACTAATTTTTGTCACCAGGTCCCGTAGCTGGTCCTTTGTTGAAAGACCTGGTCTTCTCCTATTGGGTGCTTTTATGATTGCTCAGCTGGTGGCAACTTTTATAGCAGTATATGCTAATTGGAGCTTTGCAAGAATTAAGGGAATGGGATGGGGTTGGGCTGGTGTAATCTGGATGTACAGTATAGTGACATATATCCCCCTTGATATACTCAAATTCGTAATCCGCTATGTTCTAAGTGGCAAAGCTTGGGATAATCTTCTGGAGAACAAGACTGCTTTCACAACAAAGAAAGACTATGGCAAAGAAGAGAGAGAAGCTCAGTGGGCAACTGCTCAGAGGACTCTTCATGGTCTTCAGTCACCTGACACAACCAACCTTTTCAATGACAAGAATAGCTACAGGGAGCTTTCTGAGATTGCTGAGCAAGCCAAGAGACGTGCTGAAGTTGCACGGCTTAGGGAGCTTCACACTCTAAAGGGTCATGTCGAATCAGTCGTGAAGCTTAAGGGACTTGATATCGACACTATGCAACAACATTATACTGTTTAA
Protein sequence

>Msa0477070

MGGISLEEIKNENVDLERIPVEEVFEQLKCSRAGLTSDEGANRLQVFGPNKLEEKRESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIISLLVINSTISFIEENNAGNAAAALMAGLAPKTRVLRDGRWSEEDAAILVPGDIISIKLGDIIPADARLLEGDALSVDQSALTGESLPATKNPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGILIELVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDYVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYIDSDGNWHRSSKGAPEQILNLCNCKEDVRKKAHSTIDKFAERGLRSLGVARQEIPEKDKDSPGAPWQFVGLLPLFDPPRHDSAETITRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQSKDAAVSALPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLREIFATGVVLGSYMALMTVVFFWLMKDTDFFSDKFGVRSIRKNPDEMMAALYLQVSIISQALIFVTRSRSWSFVERPGLLLLGAFMIAQLVATFIAVYANWSFARIKGMGWGWAGVIWMYSIVTYIPLDILKFVIRYVLSGKAWDNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQSPDTTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTMQQHYTV*