AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0521440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521440 MtrunA17_Chr3g0138931 99.369 951 6 0 1 951 1 951 0.0 1941
Msa0521440 MtrunA17_Chr1g0148031 92.534 951 71 0 1 951 1 951 0.0 1789
Msa0521440 MtrunA17_Chr4g0072131 86.920 948 122 1 4 951 7 952 0.0 1702
Msa0521440 MtrunA17_Chr2g0298031 86.870 952 123 2 2 951 7 958 0.0 1680
Msa0521440 MtrunA17_Chr1g0147981 87.179 936 119 1 16 951 33 967 0.0 1652
Msa0521440 MtrunA17_Chr8g0365021 83.795 975 132 3 1 951 71 1043 0.0 1647
Msa0521440 MtrunA17_Chr2g0333721 83.949 947 152 0 5 951 3 949 0.0 1636
Msa0521440 MtrunA17_Chr4g0065481 81.924 946 167 1 6 951 7 948 0.0 1590
Msa0521440 MtrunA17_Chr4g0059961 80.967 951 176 2 5 951 9 958 0.0 1561
Msa0521440 MtrunA17_Chr6g0452721 78.759 951 197 2 5 951 7 956 0.0 1536
Msa0521440 MtrunA17_Chr2g0304941 81.506 903 163 1 4 906 5 903 0.0 1513
Msa0521440 MtrunA17_Chr8g0335291 74.819 965 226 5 2 951 4 966 0.0 1425
Msa0521440 MtrunA17_Chr7g0276551 74.719 712 175 3 240 951 6 712 0.0 1113
Msa0521440 MtrunA17_Chr7g0276541 73.279 247 54 1 7 241 14 260 1.23e-109 340
Msa0521440 MtrunA17_Chr8g0381711 24.820 693 449 16 34 672 29 703 1.10e-50 193
Msa0521440 MtrunA17_Chr1g0173111 25.211 710 444 19 34 671 132 826 9.82e-48 184
Msa0521440 MtrunA17_Chr8g0382071 25.034 731 431 24 32 671 125 829 7.17e-47 182
Msa0521440 MtrunA17_Chr4g0020551 23.262 705 450 20 32 656 64 757 9.82e-46 177
Msa0521440 MtrunA17_Chr8g0355421 25.487 718 448 20 21 660 112 820 1.16e-45 178
Msa0521440 MtrunA17_Chr5g0401211 23.944 710 440 19 43 674 145 832 2.16e-45 177
Msa0521440 MtrunA17_Chr3g0134771 25.440 739 441 24 21 674 121 834 3.58e-45 176
Msa0521440 MtrunA17_Chr4g0054021 25.554 587 366 14 135 656 165 745 3.99e-45 176
Msa0521440 MtrunA17_Chr2g0298871 25.106 709 419 21 43 656 183 874 1.97e-44 174
Msa0521440 MtrunA17_Chr7g0260401 25.535 607 369 14 133 656 245 851 2.44e-42 167
Msa0521440 MtrunA17_Chr4g0002331 24.542 709 443 21 34 656 185 887 9.41e-41 162
Msa0521440 MtrunA17_Chr6g0456201 23.387 744 468 21 9 656 81 818 6.18e-40 160
Msa0521440 MtrunA17_Chr3g0134951 31.176 340 197 10 424 731 510 844 1.03e-33 140
Msa0521440 MtrunA17_Chr3g0134951 30.172 348 204 10 34 348 23 364 5.17e-28 122
Msa0521440 MtrunA17_Chr5g0413881 72.727 77 20 1 390 465 6 82 7.09e-33 124
Msa0521440 MtrunA17_Chr5g0413881 93.333 30 2 0 660 689 83 112 4.90e-11 62.0
Msa0521440 MtrunA17_Chr8g0346461 29.282 362 216 9 21 342 19 380 2.43e-31 132
Msa0521440 MtrunA17_Chr8g0346461 28.369 423 236 13 368 732 470 883 1.58e-27 120
Msa0521440 MtrunA17_Chr7g0263361 28.032 371 219 10 21 345 31 399 1.58e-29 127
Msa0521440 MtrunA17_Chr7g0263361 34.962 266 152 7 481 730 626 886 7.30e-26 115
Msa0521440 MtrunA17_Chr1g0181471 85.246 61 9 0 454 514 29 89 1.65e-29 112
Msa0521440 MtrunA17_Chr5g0423831 68.919 74 23 0 390 463 55 128 1.66e-28 114
Msa0521440 MtrunA17_Chr6g0474841 68.919 74 23 0 390 463 55 128 1.82e-28 114
Msa0521440 MtrunA17_Chr2g0297051 23.089 615 387 15 72 656 408 966 2.00e-26 117
Msa0521440 MtrunA17_Chr8g0339181 24.319 551 333 13 143 667 430 922 5.39e-23 105
Msa0521440 MtrunA17_Chr4g0052521 22.049 576 357 14 130 667 427 948 3.08e-22 103
Msa0521440 MtrunA17_Chr4g0050431 24.869 571 333 18 126 660 366 876 8.87e-21 98.6
Msa0521440 MtrunA17_Chr8g0340261 25.899 278 183 5 402 656 93 370 8.78e-20 94.4
Msa0521440 MtrunA17_Chr4g0071991 23.574 666 388 27 63 685 106 693 9.65e-19 92.0
Msa0521440 MtrunA17_Chr8g0374391 30.846 201 104 3 480 677 34 202 1.64e-18 85.9
Msa0521440 MtrunA17_Chr2g0334231 29.004 231 138 5 137 341 274 504 1.80e-18 90.1
Msa0521440 MtrunA17_Chr8g0374331 30.348 201 105 3 480 677 41 209 2.41e-18 85.9
Msa0521440 MtrunA17_Chr2g0297871 24.453 548 332 18 155 690 62 539 1.02e-16 85.1
Msa0521440 MtrunA17_Chr8g0340271 23.636 330 214 11 43 338 122 447 2.81e-16 83.2
Msa0521440 MtrunA17_Chr3g0136331 23.252 572 350 17 153 694 363 875 7.19e-16 82.8
Msa0521440 MtrunA17_Chr5g0397621 28.191 188 102 3 480 664 692 849 6.78e-14 76.3
Msa0521440 MtrunA17_Chr2g0334221 25.957 235 152 4 391 603 100 334 2.89e-13 72.4
Msa0521440 MtrunA17_Chr1g0148011 66.667 42 13 1 860 901 71 111 1.52e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521440 AT2G24520.2 85.985 949 133 0 3 951 46 994 0.0 1688
Msa0521440 AT2G24520.3 86.359 931 127 0 21 951 1 931 0.0 1665
Msa0521440 AT2G24520.1 86.359 931 127 0 21 951 1 931 0.0 1665
Msa0521440 AT4G30190.1 85.744 947 134 1 5 951 3 948 0.0 1637
Msa0521440 AT2G18960.1 85.412 946 138 0 6 951 4 949 0.0 1634
Msa0521440 AT2G07560.1 83.755 948 151 2 4 951 5 949 0.0 1632
Msa0521440 AT3G42640.1 84.161 947 146 2 5 951 6 948 0.0 1629
Msa0521440 AT5G57350.4 84.567 946 145 1 6 951 5 949 0.0 1623
Msa0521440 AT5G57350.2 84.567 946 145 1 6 951 5 949 0.0 1623
Msa0521440 AT5G57350.1 84.567 946 145 1 6 951 5 949 0.0 1623
Msa0521440 AT4G30190.2 82.857 980 134 2 5 951 3 981 0.0 1620
Msa0521440 AT1G80660.1 82.893 947 162 0 5 951 8 954 0.0 1614
Msa0521440 AT1G80660.4 82.898 918 157 0 5 922 8 925 0.0 1564
Msa0521440 AT1G80660.3 82.898 918 157 0 5 922 8 925 0.0 1563
Msa0521440 AT5G62670.1 80.947 950 176 2 6 951 8 956 0.0 1557
Msa0521440 AT3G47950.1 80.842 950 177 2 6 951 12 960 0.0 1554
Msa0521440 AT3G47950.2 80.842 950 177 2 6 951 12 960 0.0 1554
Msa0521440 AT2G18960.3 86.215 885 122 0 67 951 1 885 0.0 1535
Msa0521440 AT2G18960.2 86.215 885 122 0 67 951 1 885 0.0 1535
Msa0521440 AT1G80660.2 83.152 825 139 0 127 951 1 825 0.0 1454
Msa0521440 AT3G60330.4 72.737 961 243 4 5 951 6 961 0.0 1419
Msa0521440 AT3G60330.3 72.737 961 243 4 5 951 6 961 0.0 1419
Msa0521440 AT3G60330.2 72.529 961 245 4 5 951 6 961 0.0 1415
Msa0521440 AT3G60330.1 72.529 961 245 4 5 951 6 961 0.0 1415
Msa0521440 AT1G17260.1 70.899 945 265 2 7 951 13 947 0.0 1350
Msa0521440 AT2G24520.4 87.791 688 84 0 264 951 1 688 0.0 1269
Msa0521440 AT5G57350.3 83.430 688 113 1 264 951 1 687 0.0 1202
Msa0521440 AT4G11730.1 65.517 464 150 5 3 463 4 460 0.0 613
Msa0521440 AT4G11730.1 68.942 293 86 3 569 857 480 771 1.72e-123 395
Msa0521440 AT4G29900.1 25.348 718 417 20 38 656 159 856 4.95e-47 183
Msa0521440 AT4G29900.2 25.348 718 417 20 38 656 159 856 4.95e-47 183
Msa0521440 AT5G57110.1 25.000 708 428 19 38 656 159 852 7.99e-47 182
Msa0521440 AT5G57110.3 25.000 708 428 19 38 656 159 852 7.99e-47 182
Msa0521440 AT5G57110.2 25.000 708 428 19 38 656 159 852 7.99e-47 182
Msa0521440 AT3G22910.1 25.963 597 363 16 133 656 224 814 2.27e-46 181
Msa0521440 AT3G57330.2 24.100 722 456 22 22 671 64 765 2.59e-44 174
Msa0521440 AT1G27770.4 23.874 733 455 24 12 656 108 825 2.73e-44 174
Msa0521440 AT1G27770.1 23.874 733 455 24 12 656 108 825 2.73e-44 174
Msa0521440 AT2G22950.1 25.000 736 430 24 30 674 129 833 2.77e-44 174
Msa0521440 AT1G27770.3 23.738 733 456 24 12 656 45 762 3.10e-44 174
Msa0521440 AT3G57330.1 24.118 709 447 21 34 671 132 820 3.66e-44 174
Msa0521440 AT4G37640.1 25.588 723 420 24 27 656 125 822 4.03e-44 174
Msa0521440 AT2G41560.2 24.313 728 452 24 21 671 16 721 9.97e-42 166
Msa0521440 AT2G41560.3 24.313 728 452 24 21 671 16 721 9.97e-42 166
Msa0521440 AT2G41560.4 24.313 728 452 24 21 671 16 721 9.97e-42 166
Msa0521440 AT2G41560.1 24.038 728 454 23 21 671 118 823 1.15e-41 166
Msa0521440 AT3G21180.1 23.699 730 450 21 21 656 153 869 8.47e-41 163
Msa0521440 AT3G63380.1 24.534 697 437 21 39 656 132 818 3.77e-35 145
Msa0521440 AT1G10130.1 27.966 472 283 18 424 844 510 975 7.27e-35 144
Msa0521440 AT1G10130.1 30.994 342 203 11 34 345 23 361 4.36e-28 122
Msa0521440 AT1G07810.1 30.053 376 203 13 21 345 31 397 4.98e-31 132
Msa0521440 AT1G07810.1 28.571 378 207 11 406 730 514 881 1.51e-25 114
Msa0521440 AT1G07670.2 29.787 376 204 13 21 345 31 397 5.67e-31 132
Msa0521440 AT1G07670.2 31.935 310 170 9 457 730 577 881 3.82e-26 116
Msa0521440 AT1G07670.1 29.787 376 204 13 21 345 31 397 5.67e-31 132
Msa0521440 AT1G07670.1 31.935 310 170 9 457 730 577 881 3.82e-26 116
Msa0521440 AT4G00900.2 31.122 392 205 15 395 732 499 879 3.61e-30 129
Msa0521440 AT4G00900.2 28.571 371 211 11 21 342 14 379 1.50e-27 120
Msa0521440 AT4G00900.1 31.122 392 205 15 395 732 499 879 3.61e-30 129
Msa0521440 AT4G00900.1 28.571 371 211 11 21 342 14 379 1.50e-27 120
Msa0521440 AT1G63440.1 24.916 594 354 18 101 664 412 943 4.42e-27 119
Msa0521440 AT5G44790.1 23.333 600 355 18 113 667 418 957 2.08e-24 110
Msa0521440 AT1G27770.2 23.891 586 355 21 12 515 108 684 4.52e-23 106
Msa0521440 AT4G30110.1 23.008 665 399 22 60 685 99 689 1.64e-22 104
Msa0521440 AT4G30110.2 23.008 665 399 22 60 685 99 689 1.64e-22 104
Msa0521440 AT5G21930.2 22.980 557 331 18 153 674 354 847 1.56e-21 101
Msa0521440 AT5G21930.1 22.980 557 331 18 153 674 354 847 1.56e-21 101
Msa0521440 AT5G21930.4 23.031 508 300 16 153 628 354 802 2.16e-18 91.3
Msa0521440 AT5G21930.3 22.662 556 311 19 153 674 354 824 3.50e-18 90.5
Msa0521440 AT5G53010.1 21.980 687 455 17 38 656 185 858 5.45e-18 90.1
Msa0521440 AT4G33520.2 21.865 654 417 15 95 710 344 941 3.00e-17 87.8
Msa0521440 AT4G33520.3 22.828 587 372 13 95 656 344 874 3.95e-17 87.4
Msa0521440 AT2G19110.2 21.418 677 388 22 63 685 112 698 5.85e-15 80.5
Msa0521440 AT2G19110.3 21.418 677 388 22 63 685 112 698 5.85e-15 80.5
Msa0521440 AT2G19110.1 21.418 677 388 22 63 685 112 698 5.85e-15 80.5

Find 267 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAGCTTTGCAAGAATTA+AGG 0.202354 3_4:-74248390 Msa0521440:CDS
TGTTGGTATCATTTCTCTTT+TGG 0.205719 3_4:-74252594 Msa0521440:CDS
ACATTGACTCTGACGGAAAT+TGG 0.218673 3_4:-74250640 Msa0521440:CDS
CGAGCGTGGACTCCGTTCTT+TGG 0.218966 3_4:-74250427 Msa0521440:CDS
TGAAGAAGATGCTGCAATTT+TGG 0.219025 3_4:-74251655 Msa0521440:CDS
AAAGGCATGCGACCACAATT+TGG 0.235638 3_4:-74247054 Msa0521440:three_prime_UTR
TTATAGCAGTATATGCTAAT+TGG 0.236742 3_4:-74248409 Msa0521440:CDS
AACATTATCTGGTATATATT+AGG 0.238496 3_4:-74246742 Msa0521440:three_prime_UTR
ATCCTATCAACCATGTTATT+TGG 0.247719 3_4:+74247299 None:intergenic
GGGGTTGGGCTGGTGTAATC+TGG 0.254805 3_4:-74248358 Msa0521440:CDS
ATAATTATATACCCTTGTTT+TGG 0.255665 3_4:+74252493 None:intergenic
TATGGAAGCTGCTGCTATTA+TGG 0.264670 3_4:-74252666 Msa0521440:CDS
GCAGATACATTAACATTATC+TGG 0.282151 3_4:-74246753 Msa0521440:three_prime_UTR
TTCTTGCAGCAAGGGCTTCT+AGG 0.285624 3_4:-74250999 Msa0521440:CDS
GCATATTTATTTACCTCCTT+TGG 0.295641 3_4:+74250925 None:intergenic
TGCTATTATGGCCATTGCTT+TGG 0.300734 3_4:-74252654 Msa0521440:CDS
CAGCGGTTGGTTTGAGTCAT+AGG 0.306940 3_4:+74254187 None:intergenic
GCCAACAATTGCAGCATCTA+TGG 0.309947 3_4:+74250960 None:intergenic
TATCTCACCATCATTTAGTA+TGG 0.316399 3_4:+74249222 None:intergenic
CAAAGCTTGGGATAATCTTC+TGG 0.316415 3_4:-74248267 Msa0521440:CDS
TGGAGCTTTGCAAGAATTAA+GGG 0.318513 3_4:-74248389 Msa0521440:CDS
GATATCATCAGCATTAAATT+AGG 0.323247 3_4:-74251624 Msa0521440:CDS
AGACGGAATTGACAATCTTT+TGG 0.337942 3_4:-74251265 Msa0521440:CDS
AAGACCTGGTCTTCTCCTAT+TGG 0.340057 3_4:-74248742 Msa0521440:CDS
TTGTCTGTTACCATGGCTAT+TGG 0.341742 3_4:-74251201 Msa0521440:CDS
CGTAACCCTGTTCTTCTTGA+AGG 0.343646 3_4:+74247476 None:intergenic
CTATTAAGACTCTGTGTGTT+TGG 0.344787 3_4:-74254051 Msa0521440:five_prime_UTR
GAACCCTTTATCATGGGTTA+TGG 0.350255 3_4:-74252684 Msa0521440:CDS
ATGGCCATTGCTTTGGCTAA+TGG 0.350781 3_4:-74252647 Msa0521440:CDS
ATCCTTGGATATTGTCATAA+TGG 0.352453 3_4:+74249117 None:intergenic
TCTGAGGGATTCTTTGTTGC+CGG 0.354428 3_4:+74251519 None:intergenic
AGAAATTACCAATTGCTGTT+AGG 0.354571 3_4:+74251361 None:intergenic
TTTCCTTCTTTGTTGCAGTA+AGG 0.354691 3_4:+74246934 None:intergenic
CTATTATTGCAGGACAAGTT+TGG 0.356032 3_4:-74248882 Msa0521440:intron
TTCTTTGGGTGTTGCTAGAC+AGG 0.356432 3_4:-74250412 Msa0521440:intron
GAGCGTGGACTCCGTTCTTT+GGG 0.361280 3_4:-74250426 Msa0521440:CDS
TAAGGGAATGGGATGGGGTT+GGG 0.365555 3_4:-74248372 Msa0521440:CDS
GGCTTCTAGGACTGAGAATC+AGG 0.365755 3_4:-74250986 Msa0521440:CDS
CTTGCCATTGCCAAGGAAAC+TGG 0.367359 3_4:-74250046 Msa0521440:CDS
CGAATCAGTCGTGAAGCTTA+AGG 0.367521 3_4:-74247553 Msa0521440:CDS
CTGAAAGTGACCAACTTGAT+TGG 0.369358 3_4:+74251389 None:intergenic
GCTTCCATAACCCATGATAA+AGG 0.369885 3_4:+74252680 None:intergenic
CCAACAAAATCCTGCCAATC+AGG 0.370205 3_4:+74252611 None:intergenic
GCCAACAGGCTTCAAGTGTT+TGG 0.371772 3_4:-74252767 Msa0521440:CDS
GACTTATAATACTGACTTGT+AGG 0.372124 3_4:+74248811 None:intergenic
GGAATGGGATGGGGTTGGGC+TGG 0.376471 3_4:-74248368 Msa0521440:CDS
CAGTATAGTTCTTCATCCTT+TGG 0.376619 3_4:+74249562 None:intergenic
CACAGGCACGAGCTGGTGTC+AGG 0.380163 3_4:-74250715 Msa0521440:intron
TGCATTTGCTCAATTGCTGT+TGG 0.380271 3_4:-74251339 Msa0521440:CDS
AGTGTTTGGTCCAAACAAAT+TGG 0.380860 3_4:-74252753 Msa0521440:CDS
CAGAAAGTCCTAACAGCAAT+TGG 0.384030 3_4:-74251369 Msa0521440:CDS
GCTGCTGCTGCTCTCATGGC+TGG 0.384035 3_4:-74252524 Msa0521440:CDS
TTCTCAATCAACTCATCAAC+TGG 0.387666 3_4:+74249941 None:intergenic
TCATGTTCATTGCCTTGATC+TGG 0.387843 3_4:-74249282 Msa0521440:CDS
AGTTTCCAACTGTCTGGTTG+TGG 0.392732 3_4:+74249079 None:intergenic
AAGGCATGCGACCACAATTT+GGG 0.393874 3_4:-74247053 Msa0521440:three_prime_UTR
AGGGCTGCCATCATTTCATC+AGG 0.394338 3_4:+74248837 None:intergenic
CAACTGTCTGGTTGTGGAGA+TGG 0.394486 3_4:+74249085 None:intergenic
AGAGGAGATACTATTCTCTT+AGG 0.395076 3_4:-74247324 Msa0521440:three_prime_UTR
GGACAACCTTCAAGAAGAAC+AGG 0.399173 3_4:-74247482 Msa0521440:three_prime_UTR
GGGCTATCTTTATCTTTCTC+AGG 0.399203 3_4:+74250286 None:intergenic
AAAACAGTTGGCATAGCAAT+TGG 0.400400 3_4:+74251222 None:intergenic
TTCCTTCTTTGTTGCAGTAA+GGG 0.401327 3_4:+74246935 None:intergenic
ATTATACTGTTTAAGAAGCT+TGG 0.403584 3_4:-74247503 Msa0521440:exon
CTTATTTAAAGTCAGAGTTC+CGG 0.405876 3_4:+74251086 None:intergenic
CTCTTGTCTACAGGATTGAA+TGG 0.408748 3_4:+74250677 None:intergenic
TCTCTCAGTTTCCAACTGTC+TGG 0.408905 3_4:+74249073 None:intergenic
TTCACAACAAAGAAAGACTA+TGG 0.408967 3_4:-74247876 Msa0521440:CDS
CAAACAAATTGGAAGAGAAA+AGG 0.409390 3_4:-74252742 Msa0521440:CDS
GTTGATCAGTCTGCTTTAAC+CGG 0.412458 3_4:-74251552 Msa0521440:CDS
TAATGCTGCTGCTGCTCTCA+TGG 0.415083 3_4:-74252528 Msa0521440:CDS
AACAAATAGTTTACCTGCTC+AGG 0.416210 3_4:+74250596 None:intergenic
TTGTTCCCATTCCAAGCCTT+CGG 0.418174 3_4:+74250023 None:intergenic
AGACCTGGTCTTCTCCTATT+GGG 0.419290 3_4:-74248741 Msa0521440:CDS
GCTGATGCTCGTCTGCTTGA+GGG 0.419597 3_4:-74251588 Msa0521440:CDS
AATGACAGCTATTGAGGAAA+TGG 0.420930 3_4:-74251139 Msa0521440:CDS
GAGAAGGCTGATGGATTTGC+TGG 0.421728 3_4:-74249923 Msa0521440:CDS
AAAGCAGTTCTCTTGTCTAC+AGG 0.423643 3_4:+74250668 None:intergenic
AAGGAAACTGGCCGAAGGCT+TGG 0.428150 3_4:-74250034 Msa0521440:CDS
AAGCCTTCGGCCAGTTTCCT+TGG 0.428791 3_4:+74250036 None:intergenic
GTGAATGTTAAGATGATTAC+TGG 0.436771 3_4:-74250169 Msa0521440:intron
GAAGCAGTTGTCATTGCTAC+TGG 0.437520 3_4:-74251456 Msa0521440:CDS
TTGTCACCAGGTCCCGTAGC+TGG 0.443803 3_4:-74248776 Msa0521440:CDS
GAATCAGTCGTGAAGCTTAA+GGG 0.446216 3_4:-74247552 Msa0521440:CDS
TAAATTTGTTCACAGGCTTA+GGG 0.449466 3_4:-74247601 Msa0521440:intron
TGCAACTTCAGCACGTCTCT+TGG 0.453611 3_4:+74247725 None:intergenic
AAGAATTAAGGGAATGGGAT+GGG 0.454877 3_4:-74248378 Msa0521440:CDS
ACTGCTCAGAGGACTCTTCA+TGG 0.455575 3_4:-74247825 Msa0521440:CDS
TGAAGTTCTTAGGATTTATG+TGG 0.456304 3_4:-74252706 Msa0521440:CDS
GAAGGATACCGATTTCTTCT+CGG 0.456878 3_4:-74248981 Msa0521440:intron
TTGAAAAGGTTGGTTGTGTC+AGG 0.456888 3_4:+74247792 None:intergenic
GTCAATTACCATTCGTATTG+TGG 0.456935 3_4:-74249444 Msa0521440:intron
CGGTAACCGGACAGGTTGGC+TGG 0.459017 3_4:+74246656 None:intergenic
AGAATTAAGGGAATGGGATG+GGG 0.459676 3_4:-74248377 Msa0521440:CDS
TTATGTGGAACCCTTTATCA+TGG 0.461954 3_4:-74252691 Msa0521440:CDS
CAATCATAAAAGCACCCAAT+AGG 0.462642 3_4:+74248727 None:intergenic
TATCCATCTTCTTCATTGCT+CGG 0.463155 3_4:-74249995 Msa0521440:CDS
GCGTTAAAGAGAGCAGATAT+TGG 0.463815 3_4:-74249696 Msa0521440:CDS
GCAACTGCAAAGAGGATGTC+AGG 0.465143 3_4:-74250482 Msa0521440:CDS
AAACAAATTGGAAGAGAAAA+GGG 0.465202 3_4:-74252741 Msa0521440:CDS
GATATTGTCCTTACTGAGCC+TGG 0.466202 3_4:-74249630 Msa0521440:CDS
TCTGGTTCAACTGTTAAGAA+AGG 0.466925 3_4:-74251486 Msa0521440:CDS
CTATACTTGCGGTGTTGTAT+CGG 0.467501 3_4:+74251288 None:intergenic
AGCTATTCTTGTCATTGAAA+AGG 0.467817 3_4:+74247778 None:intergenic
CTTCCATAACCCATGATAAA+GGG 0.468799 3_4:+74252681 None:intergenic
ACAAATTGCCATGGTGCACC+AGG 0.469750 3_4:+74250265 None:intergenic
AGGGAGCTTCACACTCTAAA+GGG 0.473612 3_4:-74247582 Msa0521440:CDS
AAAGAGAATGACAGCTATTG+AGG 0.476115 3_4:-74251145 Msa0521440:CDS
TACCAAATAACATGGTTGAT+AGG 0.477229 3_4:-74247301 Msa0521440:three_prime_UTR
TTAAGGGAATGGGATGGGGT+TGG 0.477879 3_4:-74248373 Msa0521440:CDS
CATCCTCTTTGCAGTTGCAG+AGG 0.478214 3_4:+74250487 None:intergenic
AATTATTACCGAGAAGAAAT+CGG 0.479237 3_4:+74248973 None:intergenic
TTTGCTACTGGTGTTGTGCT+AGG 0.479390 3_4:-74249046 Msa0521440:CDS
GGTGCACCATGGCAATTTGT+TGG 0.479985 3_4:-74250262 Msa0521440:CDS
TTACGAATTTGAGTATATCA+AGG 0.480257 3_4:+74248309 None:intergenic
AGATGGTTTCACTCTATCCT+TGG 0.480543 3_4:+74249102 None:intergenic
TCAATGACAAGAATAGCTAC+AGG 0.482223 3_4:-74247773 Msa0521440:CDS
TTCATTGAAGAGAATAATGC+TGG 0.482524 3_4:-74252551 Msa0521440:CDS
TGCTCGAACACTTCCTCTAC+TGG 0.482543 3_4:+74252830 None:intergenic
TTTAACCGGAGAATCTCTTC+CGG 0.485484 3_4:-74251538 Msa0521440:CDS
ATTCTTGTCATTGAAAAGGT+TGG 0.486676 3_4:+74247782 None:intergenic
GTCCTCTGCAGTGACAAAAC+CGG 0.488160 3_4:-74251105 Msa0521440:CDS
GCCATAGATGCTGCAATTGT+TGG 0.488334 3_4:-74250961 Msa0521440:CDS
TAGGGAGCTTCACACTCTAA+AGG 0.489909 3_4:-74247583 Msa0521440:CDS
ATTGCTTTGGCTAATGGCGG+TGG 0.494736 3_4:-74252641 Msa0521440:CDS
TGCTGATGCTCGTCTGCTTG+AGG 0.496020 3_4:-74251589 Msa0521440:CDS
ACAAGTCAGTATTATAAGTC+AGG 0.496065 3_4:-74248808 Msa0521440:CDS
TGTTATCCTTCTTGCAGCAA+GGG 0.497356 3_4:-74251007 Msa0521440:CDS
TCATGGAACAATATAAATGC+AGG 0.498216 3_4:+74254110 None:intergenic
TTTGCAAGAATTAAGGGAAT+GGG 0.499506 3_4:-74248383 Msa0521440:CDS
ATGTTCTAAGTGGCAAAGCT+TGG 0.500130 3_4:-74248280 Msa0521440:CDS
AAACATATATGTGGAATGAC+AGG 0.500678 3_4:-74249741 Msa0521440:CDS
TGGAAGACCTCCTGATTGGC+AGG 0.503131 3_4:-74252621 Msa0521440:CDS
AACTGGCCGAAGGCTTGGAA+TGG 0.503926 3_4:-74250029 Msa0521440:CDS
CAGCTGAAATGTTCAAGAGC+AGG 0.504044 3_4:-74252809 Msa0521440:CDS
TAGCAAAGGTGCTCCTGAGC+AGG 0.507970 3_4:-74250609 Msa0521440:intron
TCTTGTCTACAGGATTGAAT+GGG 0.508672 3_4:+74250678 None:intergenic
ATTGTATTCATAGGTAGAAA+CGG 0.510261 3_4:+74246636 None:intergenic
TGTTCTAAGTGGCAAAGCTT+GGG 0.510732 3_4:-74248279 Msa0521440:CDS
CATCAGACGAAGGAGCCAAC+AGG 0.511617 3_4:-74252781 Msa0521440:CDS
TCGGCCAGTTTCCTTGGCAA+TGG 0.513300 3_4:+74250042 None:intergenic
AAAATCAAACTTCCAGATCA+AGG 0.513418 3_4:+74249270 None:intergenic
ATATCTGCTCTCTTTAACGC+AGG 0.513794 3_4:+74249699 None:intergenic
TCATAGGTAGAAACGGTAAC+CGG 0.515272 3_4:+74246643 None:intergenic
GCTAGACATGAAGTCAGAAA+AGG 0.517281 3_4:+74247134 None:intergenic
CACTCAGACCAGGCTCAGTA+AGG 0.519638 3_4:+74249622 None:intergenic
TCAAAACCAGCCAACCTGTC+CGG 0.520672 3_4:-74246662 Msa0521440:three_prime_UTR
AACCCTTACTGCAACAAAGA+AGG 0.522582 3_4:-74246937 Msa0521440:three_prime_UTR
GCGATAATCAACACCATGAA+GGG 0.525263 3_4:+74249244 None:intergenic
CTCTTAGGTACCAAATAACA+TGG 0.525764 3_4:-74247309 Msa0521440:three_prime_UTR
TTAACTTACATTGACTCTGA+CGG 0.526827 3_4:-74250647 Msa0521440:CDS
TGGTCCTTTGTTGAAAGACC+TGG 0.527044 3_4:-74248756 Msa0521440:CDS
TGCACTTACCACAATACGAA+TGG 0.527828 3_4:+74249436 None:intergenic
GCGGTGGAAGACCTCCTGAT+TGG 0.529609 3_4:-74252625 Msa0521440:CDS
TTCATTGCTCGGTCAAAGCA+AGG 0.529827 3_4:-74249984 Msa0521440:CDS
TGACCGAGCAATGAAGAAGA+TGG 0.531357 3_4:+74249992 None:intergenic
TGTTGCCGGAAGAGATTCTC+CGG 0.532571 3_4:+74251533 None:intergenic
TTTCAACAAAGGACCAGCTA+CGG 0.533044 3_4:+74248763 None:intergenic
CTGAGAGAGATATTTGCTAC+TGG 0.533620 3_4:-74249058 Msa0521440:CDS
ACAGCTATTGAGGAAATGGC+AGG 0.534436 3_4:-74251135 Msa0521440:CDS
ACTGGCCGAAGGCTTGGAAT+GGG 0.534538 3_4:-74250028 Msa0521440:CDS
CAATTCCGTCTCTATACTTG+CGG 0.537350 3_4:+74251277 None:intergenic
AGCGGTTGGTTTGAGTCATA+GGG 0.537863 3_4:+74254188 None:intergenic
TAATACTGACTTGTAGGTAG+AGG 0.538323 3_4:+74248817 None:intergenic
CTTTGCAAGAATTAAGGGAA+TGG 0.538856 3_4:-74248384 Msa0521440:CDS
TACGAATTTGAGTATATCAA+GGG 0.539623 3_4:+74248310 None:intergenic
TCAAGCAGACGAGCATCAGC+AGG 0.540988 3_4:+74251591 None:intergenic
AGAAGAGAGAGAAGCTCAGT+GGG 0.544555 3_4:-74247850 Msa0521440:CDS
ATGTTATCCTTCTTGCAGCA+AGG 0.545283 3_4:-74251008 Msa0521440:CDS
GGCGATAATCAACACCATGA+AGG 0.547314 3_4:+74249243 None:intergenic
TATGTGGAACCCTTTATCAT+GGG 0.547893 3_4:-74252690 Msa0521440:CDS
ACCAAACACTTGAAGCCTGT+TGG 0.547895 3_4:+74252766 None:intergenic
TACCTCTATTTGATCCTCCT+AGG 0.549204 3_4:-74250234 Msa0521440:CDS
TTCAACAAAGGACCAGCTAC+GGG 0.551987 3_4:+74248764 None:intergenic
ATTATCGCCATACTAAATGA+TGG 0.552243 3_4:-74249229 Msa0521440:intron
TCCTCTAGCTAGTGGCATTG+AGG 0.553716 3_4:+74247341 None:intergenic
AAAGGACCAGCTACGGGACC+TGG 0.558086 3_4:+74248770 None:intergenic
TACTGAGTGATGCAGAGTCA+TGG 0.558563 3_4:+74254093 None:intergenic
TTAATGTATCTGCTCAACAT+AGG 0.559131 3_4:+74246763 None:intergenic
ATCACAAGAGCTCTGAACCT+TGG 0.559361 3_4:-74250193 Msa0521440:CDS
TGAATTACACAGGCACGAGC+TGG 0.559826 3_4:-74250722 Msa0521440:intron
TGCCTAGGAGGATCAAATAG+AGG 0.560994 3_4:+74250232 None:intergenic
AAGAAGAGAGAGAAGCTCAG+TGG 0.561548 3_4:-74247851 Msa0521440:CDS
AACTCATGTGTTGCGAGGTG+CGG 0.561587 3_4:+74247030 None:intergenic
GAGTTGATTGAGAAGGCTGA+TGG 0.562854 3_4:-74249932 Msa0521440:CDS
CATCTCCACAACCAGACAGT+TGG 0.564636 3_4:-74249084 Msa0521440:CDS
TAGAAGCCCTTGCTGCAAGA+AGG 0.568196 3_4:+74251001 None:intergenic
AACATGTAGGTTCTAAGAGA+TGG 0.568330 3_4:-74251687 Msa0521440:intron
GTTGACAGCACCAATCAAGT+TGG 0.569975 3_4:-74251399 Msa0521440:CDS
GGTAGAAACGGTAACCGGAC+AGG 0.570044 3_4:+74246648 None:intergenic
AGAAAGGGTGATGCAGCGGT+TGG 0.570636 3_4:+74254174 None:intergenic
ACGAATTTGAGTATATCAAG+GGG 0.572707 3_4:+74248311 None:intergenic
ATTGACAAGTTCGCCGAGCG+TGG 0.575480 3_4:-74250441 Msa0521440:CDS
CAAGAGAGGAAACATATATG+TGG 0.577053 3_4:-74249750 Msa0521440:CDS
CTAATAATGACACTCAGACC+AGG 0.578038 3_4:+74249612 None:intergenic
CAAAGAACGGAGTCCACGCT+CGG 0.579535 3_4:+74250428 None:intergenic
TCGTAAAGAAACTGCAAGAG+AGG 0.582235 3_4:-74249764 Msa0521440:CDS
TTGAACGACATTAGTAGTCA+AGG 0.583033 3_4:+74247184 None:intergenic
GTAATCCGCTATGTTCTAAG+TGG 0.583653 3_4:-74248290 Msa0521440:CDS
TACCATTATGACAATATCCA+AGG 0.583733 3_4:-74249119 Msa0521440:CDS
GGATAATCTTCTGGAGAACA+AGG 0.585187 3_4:-74248258 Msa0521440:intron
ATGGTAACAGACAAAACAGT+TGG 0.587258 3_4:+74251210 None:intergenic
TATTGAGGAAATGGCAGGGA+TGG 0.587411 3_4:-74251130 Msa0521440:CDS
GCGAGGTGCGGCCCAAATTG+TGG 0.587526 3_4:+74247042 None:intergenic
ACCAGAAAACACTTCATCTG+AGG 0.591597 3_4:+74251503 None:intergenic
AAGGTTCAGAGCTCTTGTGA+TGG 0.591709 3_4:+74250195 None:intergenic
AATACTGACTTGTAGGTAGA+GGG 0.591903 3_4:+74248818 None:intergenic
ATAGTATCTCCTCTAGCTAG+TGG 0.593212 3_4:+74247333 None:intergenic
CCAGAAAACACTTCATCTGA+GGG 0.594004 3_4:+74251504 None:intergenic
CAAGAATTAAGGGAATGGGA+TGG 0.596218 3_4:-74248379 Msa0521440:CDS
GTCTAGCAACACCCAAAGAA+CGG 0.599274 3_4:+74250415 None:intergenic
AATTTGAACACTGTCCAACA+TGG 0.599317 3_4:-74254027 Msa0521440:exon
AAGGCTGATACCTCCCATGT+TGG 0.606372 3_4:+74254013 None:intergenic
GTTTCAGCACTATCATGCCT+AGG 0.606943 3_4:+74250217 None:intergenic
TTAATGCTGATGATATCACC+TGG 0.609022 3_4:+74251630 None:intergenic
CAATGACAAGAATAGCTACA+GGG 0.610067 3_4:-74247772 Msa0521440:CDS
TGGCATGCTTGCTGATCCAA+AGG 0.612764 3_4:-74250941 Msa0521440:CDS
GAGAAAGATAAAGATAGCCC+TGG 0.613292 3_4:-74250283 Msa0521440:CDS
GTTTAGTCGTAACCAATGAG+AGG 0.614173 3_4:-74246796 Msa0521440:three_prime_UTR
GCCATTGCTTTGGCTAATGG+CGG 0.614878 3_4:-74252644 Msa0521440:CDS
GCACCCAATAGGAGAAGACC+AGG 0.615453 3_4:+74248738 None:intergenic
TCCTCAATGCCACTAGCTAG+AGG 0.617823 3_4:-74247342 Msa0521440:three_prime_UTR
GGGCTGCCATCATTTCATCA+GGG 0.619360 3_4:+74248838 None:intergenic
GATGCTACAGATGCCGCTAG+AGG 0.620087 3_4:-74249660 Msa0521440:CDS
GAACCTCTGCAACTGCAAAG+AGG 0.621118 3_4:-74250490 Msa0521440:CDS
CTCAGTGGGCAACTGCTCAG+AGG 0.621585 3_4:-74247836 Msa0521440:CDS
ACAGGCACGAGCTGGTGTCA+GGG 0.622880 3_4:-74250714 Msa0521440:intron
TCTGTGAGAACCAATAGCCA+TGG 0.624951 3_4:+74251191 None:intergenic
CATGGAACAATATAAATGCA+GGG 0.625295 3_4:+74254111 None:intergenic
TGTAGGTTCTAAGAGATGGT+AGG 0.625860 3_4:-74251683 Msa0521440:intron
TGATCAGCTTGCCATTGCCA+AGG 0.627353 3_4:-74250053 Msa0521440:CDS
AGTTGATGAGTTGATTGAGA+AGG 0.629685 3_4:-74249939 Msa0521440:CDS
ACCGCCATTAGCCAAAGCAA+TGG 0.633653 3_4:+74252643 None:intergenic
AGAGACGTGCTGAAGTTGCA+CGG 0.635563 3_4:-74247722 Msa0521440:intron
TCAGGAACGAATTCCAGTAG+AGG 0.639267 3_4:-74252843 Msa0521440:intron
AATATCAGAAGCACCTCTAG+CGG 0.640398 3_4:+74249647 None:intergenic
AACAGACCAACAAATTGCCA+TGG 0.640731 3_4:+74250256 None:intergenic
GAAACGGTAACCGGACAGGT+TGG 0.640892 3_4:+74246652 None:intergenic
CAACACCGCAAGTATAGAGA+CGG 0.642140 3_4:-74251282 Msa0521440:CDS
TTGCCAAGGAAACTGGCCGA+AGG 0.646825 3_4:-74250039 Msa0521440:CDS
TCAGCACTATCATGCCTAGG+AGG 0.649052 3_4:+74250220 None:intergenic
ACAAAATCCTGCCAATCAGG+AGG 0.654781 3_4:+74252614 None:intergenic
CAGCTATTGAGGAAATGGCA+GGG 0.657394 3_4:-74251134 Msa0521440:CDS
ATATGTGGAATGACAGGTGA+TGG 0.659594 3_4:-74249735 Msa0521440:CDS
AAGACCAGGTCTTTCAACAA+AGG 0.660144 3_4:+74248752 None:intergenic
CATGGGAGGTATCAGCCTTG+AGG 0.660328 3_4:-74254009 Msa0521440:CDS
ATTTGAACACTGTCCAACAT+GGG 0.660570 3_4:-74254026 Msa0521440:exon
AAGATAGCCCTGGTGCACCA+TGG 0.661281 3_4:-74250273 Msa0521440:CDS
TCTCACAGACTTTCTCAACA+AGG 0.668351 3_4:-74251177 Msa0521440:CDS
CAAATTGCCATGGTGCACCA+GGG 0.668629 3_4:+74250266 None:intergenic
TGTTGTGCTAGGTAGCTACA+TGG 0.674726 3_4:-74249035 Msa0521440:CDS
GGCACGAGCTGGTGTCAGGG+AGG 0.679297 3_4:-74250711 Msa0521440:CDS
AGGTTCTAAGAGATGGTAGG+TGG 0.680535 3_4:-74251680 Msa0521440:CDS
TGAACACTGTCCAACATGGG+AGG 0.680717 3_4:-74254023 Msa0521440:exon
GGCTGCAGCTGTTATCGCGG+TGG 0.681132 3_4:-74246968 Msa0521440:three_prime_UTR
CAATATCAAGGATTGTGATG+TGG 0.681168 3_4:-74246989 Msa0521440:three_prime_UTR
CTTTGCCACTTAGAACATAG+CGG 0.682408 3_4:+74248285 None:intergenic
GACAACCTTCAAGAAGAACA+GGG 0.683350 3_4:-74247481 Msa0521440:three_prime_UTR
TAATGCTGATGATATCACCT+GGG 0.685163 3_4:+74251631 None:intergenic
TCATCTTAACATTCACACCA+AGG 0.685618 3_4:+74250176 None:intergenic
CATGCTTGCTGATCCAAAGG+AGG 0.686175 3_4:-74250938 Msa0521440:intron
AATTGGCATAGATCTAGCAA+AGG 0.686470 3_4:-74250623 Msa0521440:CDS
GCAGGTTTAACATCAGACGA+AGG 0.690232 3_4:-74252791 Msa0521440:CDS
GTGAAGAAAGGGTGATGCAG+CGG 0.701551 3_4:+74254170 None:intergenic
TGTGGCTGCAGCTGTTATCG+CGG 0.705933 3_4:-74246971 Msa0521440:three_prime_UTR
CTACATGGCACTAATGACAG+TGG 0.707394 3_4:-74249020 Msa0521440:CDS
CGAATTTGAGTATATCAAGG+GGG 0.718068 3_4:+74248312 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATAATATTATATTTT+AGG + chr3_4:74247619-74247638 None:intergenic 0.0%
!!! TTTTTGTTAATGTAAAATTT+AGG + chr3_4:74247107-74247126 None:intergenic 10.0%
!! TTGTAAAAAAAATGTTTATA+TGG + chr3_4:74247428-74247447 None:intergenic 10.0%
!!! TATAATATTATATTTTAGGT+AGG + chr3_4:74247615-74247634 None:intergenic 10.0%
!!! AGAAATTATTTGAAATAAAA+TGG + chr3_4:74247933-74247952 None:intergenic 10.0%
!!! ATATTTTTCAATTTAATTGA+CGG + chr3_4:74248488-74248507 None:intergenic 10.0%
!! ATATTATCAATATTTCAAAA+CGG + chr3_4:74249024-74249043 None:intergenic 10.0%
!!! TTTTGAAATATTGATAATAT+GGG - chr3_4:74249024-74249043 Msa0521440:CDS 10.0%
!!! AATTTTTTTAATACCCAAAA+AGG - chr3_4:74247077-74247096 Msa0521440:three_prime_UTR 15.0%
!!! TTATTAGCTCTAATATAATT+TGG + chr3_4:74247569-74247588 None:intergenic 15.0%
!! AAAATACTTATAACAAGATT+TGG + chr3_4:74247902-74247921 None:intergenic 15.0%
!!! ATGTTACAAAAGAAATATTT+TGG - chr3_4:74248635-74248654 Msa0521440:intron 15.0%
!! ATTAAAATCTAACAATTTCA+AGG + chr3_4:74248854-74248873 None:intergenic 15.0%
!!! GTTTTGAAATATTGATAATA+TGG - chr3_4:74249023-74249042 Msa0521440:CDS 15.0%
!!! ACTAATTGATATTTTTTTTC+TGG - chr3_4:74250337-74250356 Msa0521440:intron 15.0%
!!! AAAAGTTAACTTTTTTTTGA+AGG - chr3_4:74251469-74251488 Msa0521440:CDS 15.0%
!! AATAGTATAAATTAGAATCT+AGG - chr3_4:74252354-74252373 Msa0521440:intron 15.0%
!!! ATAATTTTTTCATGATTTAC+AGG - chr3_4:74252420-74252439 Msa0521440:intron 15.0%
!! AGAAAGATGTAATATAATTA+GGG + chr3_4:74252733-74252752 None:intergenic 15.0%
!! AAAAAAATGAAGTGAAGAAA+GGG + chr3_4:74246705-74246724 None:intergenic 20.0%
!! AAAAAAAATGAAGTGAAGAA+AGG + chr3_4:74246706-74246725 None:intergenic 20.0%
!! AATAGCAAAATATAGAAACA+GGG + chr3_4:74247322-74247341 None:intergenic 20.0%
!! AAATAGCAAAATATAGAAAC+AGG + chr3_4:74247323-74247342 None:intergenic 20.0%
!! ACATAACAATTCATTAAACA+AGG - chr3_4:74247464-74247483 Msa0521440:three_prime_UTR 20.0%
!!! TTTGAAATAAAATGGACAAA+GGG + chr3_4:74247925-74247944 None:intergenic 20.0%
!!! ATTTGAAATAAAATGGACAA+AGG + chr3_4:74247926-74247945 None:intergenic 20.0%
!!! TAATTATATACCCTTGTTTT+GGG + chr3_4:74248370-74248389 None:intergenic 20.0%
!!! ATAATTATATACCCTTGTTT+TGG + chr3_4:74248371-74248390 None:intergenic 20.0%
!! AGTCATTGAAATTATAAGAT+TGG - chr3_4:74248427-74248446 Msa0521440:intron 20.0%
!!! ATTTAATTTCAGATATATCC+TGG + chr3_4:74248458-74248477 None:intergenic 20.0%
!!! GTATGTTTTATTCATTTTGA+TGG - chr3_4:74248612-74248631 Msa0521440:intron 20.0%
!! TAATCAAATTTAGTATTTGC+AGG - chr3_4:74248870-74248889 Msa0521440:CDS 20.0%
!! AATCAAATTTAGTATTTGCA+GGG - chr3_4:74248871-74248890 Msa0521440:CDS 20.0%
!!! AATTAAAATTTTGCAATCCT+AGG - chr3_4:74248996-74249015 Msa0521440:CDS 20.0%
!!! ATTAAAATTTTGCAATCCTA+GGG - chr3_4:74248997-74249016 Msa0521440:CDS 20.0%
!! TAATGACTAAATATTCAAGT+TGG + chr3_4:74249084-74249103 None:intergenic 20.0%
!! TGAACATAATCATAATCATA+CGG + chr3_4:74250309-74250328 None:intergenic 20.0%
!! ATGAACCATTTATATAAGTA+TGG + chr3_4:74251518-74251537 None:intergenic 20.0%
!!! ATTTGAAGTAAACAATATGA+AGG + chr3_4:74251677-74251696 None:intergenic 20.0%
!!! TCTTAATTTTTTTTGCTACT+AGG + chr3_4:74251943-74251962 None:intergenic 20.0%
!!! ATTTATACTATTTCTTCCTA+AGG + chr3_4:74252346-74252365 None:intergenic 20.0%
!! GAGAAAGATGTAATATAATT+AGG + chr3_4:74252734-74252753 None:intergenic 20.0%
!! TTCATCATAGTATTTATTAC+AGG + chr3_4:74252762-74252781 None:intergenic 20.0%
!!! GATTTTTTAAATTTGTTCAC+AGG - chr3_4:74253253-74253272 Msa0521440:intron 20.0%
!!! TAATCATGTGTTTTTAGATT+AGG - chr3_4:74253461-74253480 Msa0521440:intron 20.0%
!!! TTTTCAAAATCACAATATCA+AGG - chr3_4:74253860-74253879 Msa0521440:intron 20.0%
!! AACATTATCTGGTATATATT+AGG - chr3_4:74254119-74254138 Msa0521440:five_prime_UTR 20.0%
!! AAATTTAGGTACTCCTTTTT+GGG + chr3_4:74247093-74247112 None:intergenic 25.0%
!! AAAATTTAGGTACTCCTTTT+TGG + chr3_4:74247094-74247113 None:intergenic 25.0%
! AGTAGTAACAGTAACTTAAA+AGG + chr3_4:74247231-74247250 None:intergenic 25.0%
!!! AATTTTTCATTGAAAGCACT+GGG + chr3_4:74247522-74247541 None:intergenic 25.0%
!!! TAATTTTTCATTGAAAGCAC+TGG + chr3_4:74247523-74247542 None:intergenic 25.0%
! ATAATTTGGACCAAACTAAT+AGG + chr3_4:74247555-74247574 None:intergenic 25.0%
! AAACAAATTGGAAGAGAAAA+GGG - chr3_4:74248120-74248139 Msa0521440:intron 25.0%
!!! AGCAAATTTTTGAAGTTCTT+AGG - chr3_4:74248145-74248164 Msa0521440:intron 25.0%
!!! AATTATATACCCTTGTTTTG+GGG + chr3_4:74248369-74248388 None:intergenic 25.0%
!! ATTATAAGATTGGTTAATCC+AGG - chr3_4:74248437-74248456 Msa0521440:intron 25.0%
!!! TTTTGTTTGCAATCATTGTT+TGG - chr3_4:74248747-74248766 Msa0521440:CDS 25.0%
!! AACAATTTCAAGGATCATTT+TGG + chr3_4:74248844-74248863 None:intergenic 25.0%
! TGATAATAGATTTAGACAGA+AGG - chr3_4:74248965-74248984 Msa0521440:intron 25.0%
!! TTAAAATTTTGCAATCCTAG+GGG - chr3_4:74248998-74249017 Msa0521440:CDS 25.0%
! GATATCATCAGCATTAAATT+AGG - chr3_4:74249237-74249256 Msa0521440:CDS 25.0%
!!! AATCTTTTGGTTCTATTGAT+TGG - chr3_4:74249609-74249628 Msa0521440:CDS 25.0%
!! TGTTGATAAAAACTTGATTG+AGG - chr3_4:74249803-74249822 Msa0521440:intron 25.0%
!! TCTTTCTGATACTGAATTTT+AGG - chr3_4:74250079-74250098 Msa0521440:intron 25.0%
!! AGTTTTACTTTGAATTACAC+AGG - chr3_4:74250129-74250148 Msa0521440:intron 25.0%
!!! TTGAATGGTTTGTTTATAAC+AGG - chr3_4:74250547-74250566 Msa0521440:intron 25.0%
!!! TTTTTTCTCTTTCTATGACA+TGG - chr3_4:74251056-74251075 Msa0521440:CDS 25.0%
! GCAATTAAATCAAGTAAGTT+TGG + chr3_4:74251332-74251351 None:intergenic 25.0%
! CTTGTCCATACTTATATAAA+TGG - chr3_4:74251510-74251529 Msa0521440:CDS 25.0%
!!! TATTCTTCATTTTTCCAGTT+TGG - chr3_4:74251554-74251573 Msa0521440:CDS 25.0%
! AATTATTACCGAGAAGAAAT+CGG + chr3_4:74251891-74251910 None:intergenic 25.0%
!!! ATTTTTTCATGATTTACAGG+TGG - chr3_4:74252423-74252442 Msa0521440:intron 25.0%
! TTATAGCAGTATATGCTAAT+TGG - chr3_4:74252452-74252471 Msa0521440:intron 25.0%
! TACGAATTTGAGTATATCAA+GGG + chr3_4:74252554-74252573 None:intergenic 25.0%
! TTACGAATTTGAGTATATCA+AGG + chr3_4:74252555-74252574 None:intergenic 25.0%
! TGCAGTTGAAAATTTGAAAA+AGG + chr3_4:74252685-74252704 None:intergenic 25.0%
! GTTGACTAAATTAAGAAAGT+TGG + chr3_4:74252860-74252879 None:intergenic 25.0%
!! ATTTTGAATCTTGAAATCTC+TGG + chr3_4:74252935-74252954 None:intergenic 25.0%
! TAAAAAATCTCTTAGACACT+AGG + chr3_4:74253242-74253261 None:intergenic 25.0%
! ATTATACTGTTTAAGAAGCT+TGG - chr3_4:74253358-74253377 Msa0521440:intron 25.0%
!!! TGTTTTTAGATTAGGTTGAA+GGG - chr3_4:74253469-74253488 Msa0521440:intron 25.0%
!! TCCTTTTGTGAAAAATTGAA+TGG - chr3_4:74253492-74253511 Msa0521440:intron 25.0%
!! ACCATTCAATTTTTCACAAA+AGG + chr3_4:74253496-74253515 None:intergenic 25.0%
!!! ATTTACTTGCGTCTTATTTT+TGG - chr3_4:74253583-74253602 Msa0521440:intron 25.0%
!!! GCAATCAGAGTTTTAAATAA+AGG - chr3_4:74253789-74253808 Msa0521440:intron 25.0%
CATGGAACAATATAAATGCA+GGG + chr3_4:74246753-74246772 None:intergenic 30.0%
TCATGGAACAATATAAATGC+AGG + chr3_4:74246754-74246773 None:intergenic 30.0%
!!! CTGTGTTTACATTTTTTGCA+TGG - chr3_4:74246938-74246957 Msa0521440:three_prime_UTR 30.0%
! AGTTACTGTCTCAATTTTGT+TGG + chr3_4:74246995-74247014 None:intergenic 30.0%
GATTTAATGACACACAAGTT+AGG + chr3_4:74247723-74247742 None:intergenic 30.0%
!!! TTGAAACAACGTTGTTTTTC+AGG - chr3_4:74248000-74248019 Msa0521440:intron 30.0%
!! CTTTTCTCTTCCAATTTGTT+TGG + chr3_4:74248121-74248140 None:intergenic 30.0%
CAAACAAATTGGAAGAGAAA+AGG - chr3_4:74248119-74248138 Msa0521440:intron 30.0%
TGAAGTTCTTAGGATTTATG+TGG - chr3_4:74248155-74248174 Msa0521440:intron 30.0%
! TGTTGGTATCATTTCTCTTT+TGG - chr3_4:74248267-74248286 Msa0521440:CDS 30.0%
TTCATTGAAGAGAATAATGC+TGG - chr3_4:74248310-74248329 Msa0521440:CDS 30.0%
!!! ATTATATACCCTTGTTTTGG+GGG + chr3_4:74248368-74248387 None:intergenic 30.0%
!!! AAGGTTATATGCTTGTTTTG+AGG - chr3_4:74248561-74248580 Msa0521440:intron 30.0%
!!! GAAATATTTTGGTGAAGTGA+AGG - chr3_4:74248646-74248665 Msa0521440:intron 30.0%
AAGTGAAGGACTTAATTGAT+TGG - chr3_4:74248660-74248679 Msa0521440:intron 30.0%
AATCAAAGTGAATAGTGCTA+GGG - chr3_4:74248935-74248954 Msa0521440:intron 30.0%
AGTTGGTCATTGAAATTGTA+GGG + chr3_4:74249067-74249086 None:intergenic 30.0%
! AAGTTGGTCATTGAAATTGT+AGG + chr3_4:74249068-74249087 None:intergenic 30.0%
TTTCTTGCTACAAAACATGT+AGG - chr3_4:74249161-74249180 Msa0521440:intron 30.0%
! AGAAATTACCAATTGCTGTT+AGG + chr3_4:74249503-74249522 None:intergenic 30.0%
! CTTATTTAAAGTCAGAGTTC+CGG + chr3_4:74249778-74249797 None:intergenic 30.0%
! TTGATTGAGGTTTTTGCTAA+GGG - chr3_4:74249816-74249835 Msa0521440:intron 30.0%
GCATATTTATTTACCTCCTT+TGG + chr3_4:74249939-74249958 None:intergenic 30.0%
!! TTAACTTACATTGACTCTGA+CGG - chr3_4:74250214-74250233 Msa0521440:CDS 30.0%
!!! ACTATTTGTTTTGTTAGCAG+TGG - chr3_4:74250278-74250297 Msa0521440:CDS 30.0%
ACATAATCATAATCATACGG+TGG + chr3_4:74250306-74250325 None:intergenic 30.0%
CAATAGCATCAACAAAAGAA+GGG + chr3_4:74250530-74250549 None:intergenic 30.0%
TCAATAGCATCAACAAAAGA+AGG + chr3_4:74250531-74250550 None:intergenic 30.0%
! CTTTTGTTGATGCTATTGAA+TGG - chr3_4:74250532-74250551 Msa0521440:intron 30.0%
GTGAATGTTAAGATGATTAC+TGG - chr3_4:74250692-74250711 Msa0521440:CDS 30.0%
ATGATTACTGGTATGATTTG+AGG - chr3_4:74250704-74250723 Msa0521440:CDS 30.0%
TGAAATATGAGCTACAAGAA+AGG + chr3_4:74250735-74250754 None:intergenic 30.0%
AAACATATATGTGGAATGAC+AGG - chr3_4:74251120-74251139 Msa0521440:CDS 30.0%
GTGTTAGAATGCTAAAGATT+TGG + chr3_4:74251367-74251386 None:intergenic 30.0%
ATTGTGGTAAGTGCAAAAAT+AGG - chr3_4:74251433-74251452 Msa0521440:CDS 30.0%
AAAATCAAACTTCCAGATCA+AGG + chr3_4:74251594-74251613 None:intergenic 30.0%
TACCATTATGACAATATCCA+AGG - chr3_4:74251742-74251761 Msa0521440:intron 30.0%
ATCCTTGGATATTGTCATAA+TGG + chr3_4:74251747-74251766 None:intergenic 30.0%
!!! TCATTTCATCAGGGTTTTTT+CGG + chr3_4:74252017-74252036 None:intergenic 30.0%
AAAAAACCCTGATGAAATGA+TGG - chr3_4:74252017-74252036 Msa0521440:intron 30.0%
!! GACTTATAATACTGACTTGT+AGG + chr3_4:74252053-74252072 None:intergenic 30.0%
ACAAGTCAGTATTATAAGTC+AGG - chr3_4:74252053-74252072 Msa0521440:intron 30.0%
TGTATGATCATCAAGAATGA+GGG + chr3_4:74252229-74252248 None:intergenic 30.0%
!! GCAGTGTACATTTTATTTAG+CGG + chr3_4:74252280-74252299 None:intergenic 30.0%
TTTGCAAGAATTAAGGGAAT+GGG - chr3_4:74252478-74252497 Msa0521440:intron 30.0%
ACGAATTTGAGTATATCAAG+GGG + chr3_4:74252553-74252572 None:intergenic 30.0%
TTTGAAAAAGGTTCTCAAGA+GGG + chr3_4:74252673-74252692 None:intergenic 30.0%
ATTTGAAAAAGGTTCTCAAG+AGG + chr3_4:74252674-74252693 None:intergenic 30.0%
! GTTTTACAAGTGTACTTTTC+AGG + chr3_4:74252805-74252824 None:intergenic 30.0%
! AGTAATATAATGCTGCTTCT+AGG + chr3_4:74252888-74252907 None:intergenic 30.0%
TTCACAACAAAGAAAGACTA+TGG - chr3_4:74252985-74253004 Msa0521440:intron 30.0%
ATTCTTGTCATTGAAAAGGT+TGG + chr3_4:74253082-74253101 None:intergenic 30.0%
AGCTATTCTTGTCATTGAAA+AGG + chr3_4:74253086-74253105 None:intergenic 30.0%
! TTAAATTTGTTCACAGGCTT+AGG - chr3_4:74253259-74253278 Msa0521440:intron 30.0%
! TAAATTTGTTCACAGGCTTA+GGG - chr3_4:74253260-74253279 Msa0521440:intron 30.0%
!!! CATTTGTTGTTTTTGCTTCT+TGG + chr3_4:74253422-74253441 None:intergenic 30.0%
!!! GTGTTTTTAGATTAGGTTGA+AGG - chr3_4:74253468-74253487 Msa0521440:intron 30.0%
TACCAAATAACATGGTTGAT+AGG - chr3_4:74253560-74253579 Msa0521440:intron 30.0%
ATCCTATCAACCATGTTATT+TGG + chr3_4:74253565-74253584 None:intergenic 30.0%
TTAATGTATCTGCTCAACAT+AGG + chr3_4:74254101-74254120 None:intergenic 30.0%
GCAGATACATTAACATTATC+TGG - chr3_4:74254108-74254127 Msa0521440:five_prime_UTR 30.0%
CTATTAAGACTCTGTGTGTT+TGG - chr3_4:74246810-74246829 Msa0521440:three_prime_UTR 35.0%
AATTTGAACACTGTCCAACA+TGG - chr3_4:74246834-74246853 Msa0521440:three_prime_UTR 35.0%
ATTTGAACACTGTCCAACAT+GGG - chr3_4:74246835-74246854 Msa0521440:three_prime_UTR 35.0%
!!! TCTCGTTTTTTATCTCCTCA+AGG + chr3_4:74246870-74246889 None:intergenic 35.0%
AAAAAACGAGAACGTTGATC+TGG - chr3_4:74246879-74246898 Msa0521440:three_prime_UTR 35.0%
TAGCATGTTCATCACTCAAA+TGG + chr3_4:74247045-74247064 None:intergenic 35.0%
TTCACAGCACTTTGTGATAT+AGG - chr3_4:74247159-74247178 Msa0521440:three_prime_UTR 35.0%
AGCACTTTGTGATATAGGAA+GGG - chr3_4:74247164-74247183 Msa0521440:three_prime_UTR 35.0%
TGAATTACAAGTGCCTAAAG+AGG + chr3_4:74247288-74247307 None:intergenic 35.0%
ATGACACACAAGTTAGGTTT+AGG + chr3_4:74247717-74247736 None:intergenic 35.0%
AGTGTTTGGTCCAAACAAAT+TGG - chr3_4:74248108-74248127 Msa0521440:intron 35.0%
TTATGTGGAACCCTTTATCA+TGG - chr3_4:74248170-74248189 Msa0521440:intron 35.0%
TATGTGGAACCCTTTATCAT+GGG - chr3_4:74248171-74248190 Msa0521440:intron 35.0%
CTTCCATAACCCATGATAAA+GGG + chr3_4:74248183-74248202 None:intergenic 35.0%
!! ATTTTGCACCACAGTTTTGA+AGG - chr3_4:74248542-74248561 Msa0521440:intron 35.0%
GCATATAACCTTCAAAACTG+TGG + chr3_4:74248553-74248572 None:intergenic 35.0%
!!! GTTATATGCTTGTTTTGAGG+CGG - chr3_4:74248564-74248583 Msa0521440:intron 35.0%
TGGAGAGTAAATACGCAAAT+TGG - chr3_4:74248767-74248786 Msa0521440:CDS 35.0%
GAATCAAAGTGAATAGTGCT+AGG - chr3_4:74248934-74248953 Msa0521440:intron 35.0%
!! AACATGTAGGTTCTAAGAGA+TGG - chr3_4:74249174-74249193 Msa0521440:intron 35.0%
! TGAAGAAGATGCTGCAATTT+TGG - chr3_4:74249206-74249225 Msa0521440:intron 35.0%
TAATGCTGATGATATCACCT+GGG + chr3_4:74249233-74249252 None:intergenic 35.0%
TTAATGCTGATGATATCACC+TGG + chr3_4:74249234-74249253 None:intergenic 35.0%
! TCTGGTTCAACTGTTAAGAA+AGG - chr3_4:74249375-74249394 Msa0521440:intron 35.0%
! TTTTGGTAAAGCTGCTCATT+TGG - chr3_4:74249440-74249459 Msa0521440:intron 35.0%
! AGACGGAATTGACAATCTTT+TGG - chr3_4:74249596-74249615 Msa0521440:CDS 35.0%
!!! CTTTTGGTTCTATTGATTGG+AGG - chr3_4:74249612-74249631 Msa0521440:CDS 35.0%
AAAACAGTTGGCATAGCAAT+TGG + chr3_4:74249642-74249661 None:intergenic 35.0%
ATGGTAACAGACAAAACAGT+TGG + chr3_4:74249654-74249673 None:intergenic 35.0%
! AACTGTTTTGTCTGTTACCA+TGG - chr3_4:74249653-74249672 Msa0521440:CDS 35.0%
AAAGAGAATGACAGCTATTG+AGG - chr3_4:74249716-74249735 Msa0521440:CDS 35.0%
AATGACAGCTATTGAGGAAA+TGG - chr3_4:74249722-74249741 Msa0521440:CDS 35.0%
! CTTGATTGAGGTTTTTGCTA+AGG - chr3_4:74249815-74249834 Msa0521440:intron 35.0%
ACCAGAAAGATGTAGCATTT+AGG + chr3_4:74249961-74249980 None:intergenic 35.0%
!!! CTGGTAACTTTTTTGTCAGT+AGG - chr3_4:74249976-74249995 Msa0521440:CDS 35.0%
TATCAGAAAGATAGACCACT+GGG + chr3_4:74250070-74250089 None:intergenic 35.0%
TCTTGTCTACAGGATTGAAT+GGG + chr3_4:74250186-74250205 None:intergenic 35.0%
AATTGGCATAGATCTAGCAA+AGG - chr3_4:74250238-74250257 Msa0521440:CDS 35.0%
AACAAATAGTTTACCTGCTC+AGG + chr3_4:74250268-74250287 None:intergenic 35.0%
TCATCTTAACATTCACACCA+AGG + chr3_4:74250688-74250707 None:intergenic 35.0%
ATCATGCAGCTTAAACATTG+TGG - chr3_4:74250768-74250787 Msa0521440:intron 35.0%
TTGTGGATTTCTTGTTCTCT+AGG - chr3_4:74250785-74250804 Msa0521440:intron 35.0%
TATCCATCTTCTTCATTGCT+CGG - chr3_4:74250866-74250885 Msa0521440:intron 35.0%
TTCTCAATCAACTCATCAAC+TGG + chr3_4:74250923-74250942 None:intergenic 35.0%
!! AGTTGATGAGTTGATTGAGA+AGG - chr3_4:74250922-74250941 Msa0521440:intron 35.0%
CATAACCATCATTGTTGTGA+AGG + chr3_4:74250981-74251000 None:intergenic 35.0%
CAAGAGAGGAAACATATATG+TGG - chr3_4:74251111-74251130 Msa0521440:CDS 35.0%
CAGTATAGTTCTTCATCCTT+TGG + chr3_4:74251302-74251321 None:intergenic 35.0%
GTCAATTACCATTCGTATTG+TGG - chr3_4:74251417-74251436 Msa0521440:CDS 35.0%
CAATGAACATGAAACCAAAC+TGG + chr3_4:74251571-74251590 None:intergenic 35.0%
TCATAATGGTACCTAGTAAC+GGG + chr3_4:74251733-74251752 None:intergenic 35.0%
GTCATAATGGTACCTAGTAA+CGG + chr3_4:74251734-74251753 None:intergenic 35.0%
! TAATGACAGTGGTGTTTTTC+TGG - chr3_4:74251852-74251871 Msa0521440:intron 35.0%
CTACTAGGAGATACTATTGA+GGG + chr3_4:74251928-74251947 None:intergenic 35.0%
AACACGACTTCTATTATTGC+AGG - chr3_4:74251969-74251988 Msa0521440:intron 35.0%
CTATTATTGCAGGACAAGTT+TGG - chr3_4:74251979-74251998 Msa0521440:intron 35.0%
!! AATACTGACTTGTAGGTAGA+GGG + chr3_4:74252046-74252065 None:intergenic 35.0%
!! TAATACTGACTTGTAGGTAG+AGG + chr3_4:74252047-74252066 None:intergenic 35.0%
!! CAATCATAAAAGCACCCAAT+AGG + chr3_4:74252137-74252156 None:intergenic 35.0%
GTGTATGATCATCAAGAATG+AGG + chr3_4:74252230-74252249 None:intergenic 35.0%
!! GTGTACATTTTATTTAGCGG+TGG + chr3_4:74252277-74252296 None:intergenic 35.0%
AATTGTGTTACCAGCTGATA+AGG + chr3_4:74252385-74252404 None:intergenic 35.0%
TTGGAGCTTTGCAAGAATTA+AGG - chr3_4:74252471-74252490 Msa0521440:intron 35.0%
TGGAGCTTTGCAAGAATTAA+GGG - chr3_4:74252472-74252491 Msa0521440:intron 35.0%
CTTTGCAAGAATTAAGGGAA+TGG - chr3_4:74252477-74252496 Msa0521440:intron 35.0%
AAGAATTAAGGGAATGGGAT+GGG - chr3_4:74252483-74252502 Msa0521440:intron 35.0%
CGAATTTGAGTATATCAAGG+GGG + chr3_4:74252552-74252571 None:intergenic 35.0%
! GAGGGTCTTGTATTAAGATA+CGG + chr3_4:74252655-74252674 None:intergenic 35.0%
TCAATGACAAGAATAGCTAC+AGG - chr3_4:74253088-74253107 Msa0521440:intron 35.0%
CAATGACAAGAATAGCTACA+GGG - chr3_4:74253089-74253108 Msa0521440:intron 35.0%
AGCAAAAACAACAAATGCAG+TGG - chr3_4:74253425-74253444 Msa0521440:intron 35.0%
AGAGGAGATACTATTCTCTT+AGG - chr3_4:74253537-74253556 Msa0521440:intron 35.0%
CTCTTAGGTACCAAATAACA+TGG - chr3_4:74253552-74253571 Msa0521440:intron 35.0%
TTGAACGACATTAGTAGTCA+AGG + chr3_4:74253680-74253699 None:intergenic 35.0%
TCTAGCCTAAAAACAGTGAA+AGG - chr3_4:74253744-74253763 Msa0521440:intron 35.0%
CTAGCCTAAAAACAGTGAAA+GGG - chr3_4:74253745-74253764 Msa0521440:intron 35.0%
ATAAAAACTCATGTGTTGCG+AGG + chr3_4:74253839-74253858 None:intergenic 35.0%
CAATATCAAGGATTGTGATG+TGG - chr3_4:74253872-74253891 Msa0521440:intron 35.0%
TTCCTTCTTTGTTGCAGTAA+GGG + chr3_4:74253929-74253948 None:intergenic 35.0%
TTTCCTTCTTTGTTGCAGTA+AGG + chr3_4:74253930-74253949 None:intergenic 35.0%
!! TGCATCTCACTTTTGTTTCT+TGG - chr3_4:74254043-74254062 Msa0521440:five_prime_UTR 35.0%
!! GGATTGATTTTTCCTCTCAT+TGG + chr3_4:74254080-74254099 None:intergenic 35.0%
CAGCACTTTGTGATATAGGA+AGG - chr3_4:74247163-74247182 Msa0521440:three_prime_UTR 40.0%
TGCATTCACCAATCCTCTTT+AGG - chr3_4:74247272-74247291 Msa0521440:three_prime_UTR 40.0%
TACAAGTGCCTAAAGAGGAT+TGG + chr3_4:74247283-74247302 None:intergenic 40.0%
AGCCAGTTCACCTATTAGTT+TGG - chr3_4:74247542-74247561 Msa0521440:CDS 40.0%
GACCAAACTAATAGGTGAAC+TGG + chr3_4:74247547-74247566 None:intergenic 40.0%
! GAACCCTTTATCATGGGTTA+TGG - chr3_4:74248177-74248196 Msa0521440:intron 40.0%
GCTTCCATAACCCATGATAA+AGG + chr3_4:74248184-74248203 None:intergenic 40.0%
TATGGAAGCTGCTGCTATTA+TGG - chr3_4:74248195-74248214 Msa0521440:intron 40.0%
TGCTATTATGGCCATTGCTT+TGG - chr3_4:74248207-74248226 Msa0521440:intron 40.0%
AATATTTCAAAACGGCCCCT+AGG + chr3_4:74249016-74249035 None:intergenic 40.0%
!! TGTAGGTTCTAAGAGATGGT+AGG - chr3_4:74249178-74249197 Msa0521440:intron 40.0%
GTTGATCAGTCTGCTTTAAC+CGG - chr3_4:74249309-74249328 Msa0521440:intron 40.0%
TTTAACCGGAGAATCTCTTC+CGG - chr3_4:74249323-74249342 Msa0521440:intron 40.0%
CCAGAAAACACTTCATCTGA+GGG + chr3_4:74249360-74249379 None:intergenic 40.0%
ACCAGAAAACACTTCATCTG+AGG + chr3_4:74249361-74249380 None:intergenic 40.0%
!!! ACTGGAGTGCACACATTTTT+TGG - chr3_4:74249423-74249442 Msa0521440:intron 40.0%
CTGAAAGTGACCAACTTGAT+TGG + chr3_4:74249475-74249494 None:intergenic 40.0%
CAGAAAGTCCTAACAGCAAT+TGG - chr3_4:74249492-74249511 Msa0521440:intron 40.0%
TGCATTTGCTCAATTGCTGT+TGG - chr3_4:74249522-74249541 Msa0521440:intron 40.0%
!! CTATACTTGCGGTGTTGTAT+CGG + chr3_4:74249576-74249595 None:intergenic 40.0%
CAATTCCGTCTCTATACTTG+CGG + chr3_4:74249587-74249606 None:intergenic 40.0%
TTGTCTGTTACCATGGCTAT+TGG - chr3_4:74249660-74249679 Msa0521440:CDS 40.0%
TCTCACAGACTTTCTCAACA+AGG - chr3_4:74249684-74249703 Msa0521440:CDS 40.0%
!! TTTTGCTAAGGGTGTAGAGA+AGG - chr3_4:74249827-74249846 Msa0521440:intron 40.0%
ATGTTATCCTTCTTGCAGCA+AGG - chr3_4:74249853-74249872 Msa0521440:intron 40.0%
TGTTATCCTTCTTGCAGCAA+GGG - chr3_4:74249854-74249873 Msa0521440:intron 40.0%
GCCTAAATGCTACATCTTTC+TGG - chr3_4:74249957-74249976 Msa0521440:CDS 40.0%
AGGAATCAAACTCGATACCT+CGG - chr3_4:74249996-74250015 Msa0521440:CDS 40.0%
ATCAGAAAGATAGACCACTG+GGG + chr3_4:74250069-74250088 None:intergenic 40.0%
GTATCAGAAAGATAGACCAC+TGG + chr3_4:74250071-74250090 None:intergenic 40.0%
CTCTTGTCTACAGGATTGAA+TGG + chr3_4:74250187-74250206 None:intergenic 40.0%
AAAGCAGTTCTCTTGTCTAC+AGG + chr3_4:74250196-74250215 None:intergenic 40.0%
!! ACATTGACTCTGACGGAAAT+TGG - chr3_4:74250221-74250240 Msa0521440:CDS 40.0%
GGGCTATCTTTATCTTTCTC+AGG + chr3_4:74250578-74250597 None:intergenic 40.0%
GAGAAAGATAAAGATAGCCC+TGG - chr3_4:74250578-74250597 Msa0521440:intron 40.0%
AACAGACCAACAAATTGCCA+TGG + chr3_4:74250608-74250627 None:intergenic 40.0%
TACCTCTATTTGATCCTCCT+AGG - chr3_4:74250627-74250646 Msa0521440:CDS 40.0%
TAGGTCCTTCACAACAATGA+TGG - chr3_4:74250973-74250992 Msa0521440:CDS 40.0%
TCGTAAAGAAACTGCAAGAG+AGG - chr3_4:74251097-74251116 Msa0521440:CDS 40.0%
ATATGTGGAATGACAGGTGA+TGG - chr3_4:74251126-74251145 Msa0521440:CDS 40.0%
ATATCTGCTCTCTTTAACGC+AGG + chr3_4:74251165-74251184 None:intergenic 40.0%
GCGTTAAAGAGAGCAGATAT+TGG - chr3_4:74251165-74251184 Msa0521440:CDS 40.0%
!! AATATCAGAAGCACCTCTAG+CGG + chr3_4:74251217-74251236 None:intergenic 40.0%
CTAATAATGACACTCAGACC+AGG + chr3_4:74251252-74251271 None:intergenic 40.0%
! CAAGCAGAGCAATTTTCCAA+AGG - chr3_4:74251283-74251302 Msa0521440:CDS 40.0%
TGCACTTACCACAATACGAA+TGG + chr3_4:74251428-74251447 None:intergenic 40.0%
TCATGTTCATTGCCTTGATC+TGG - chr3_4:74251579-74251598 Msa0521440:CDS 40.0%
!! GTTTGATTTTGCACCCTTCA+TGG - chr3_4:74251604-74251623 Msa0521440:CDS 40.0%
GCGATAATCAACACCATGAA+GGG + chr3_4:74251620-74251639 None:intergenic 40.0%
AATTTCCTTCACCCGTTACT+AGG - chr3_4:74251719-74251738 Msa0521440:intron 40.0%
AGATGGTTTCACTCTATCCT+TGG + chr3_4:74251762-74251781 None:intergenic 40.0%
! CTGAGAGAGATATTTGCTAC+TGG - chr3_4:74251803-74251822 Msa0521440:intron 40.0%
!! GAAGGATACCGATTTCTTCT+CGG - chr3_4:74251880-74251899 Msa0521440:intron 40.0%
GCTACTAGGAGATACTATTG+AGG + chr3_4:74251929-74251948 None:intergenic 40.0%
! AGGCACTAATTTTTGTCACC+AGG - chr3_4:74252073-74252092 Msa0521440:intron 40.0%
TTTCAACAAAGGACCAGCTA+CGG + chr3_4:74252101-74252120 None:intergenic 40.0%
AAGACCAGGTCTTTCAACAA+AGG + chr3_4:74252112-74252131 None:intergenic 40.0%
! TGCTTTTATGATTGCTCAGC+TGG - chr3_4:74252143-74252162 Msa0521440:intron 40.0%
!! ATTTTATTTAGCGGTGGTCG+TGG + chr3_4:74252271-74252290 None:intergenic 40.0%
AGTTACACTTCTGTTGCCTT+AGG - chr3_4:74252327-74252346 Msa0521440:intron 40.0%
CAAGAATTAAGGGAATGGGA+TGG - chr3_4:74252482-74252501 Msa0521440:intron 40.0%
AGAATTAAGGGAATGGGATG+GGG - chr3_4:74252484-74252503 Msa0521440:intron 40.0%
! GTAATCCGCTATGTTCTAAG+TGG - chr3_4:74252571-74252590 Msa0521440:CDS 40.0%
! CTTTGCCACTTAGAACATAG+CGG + chr3_4:74252579-74252598 None:intergenic 40.0%
! ATGTTCTAAGTGGCAAAGCT+TGG - chr3_4:74252581-74252600 Msa0521440:CDS 40.0%
! TGTTCTAAGTGGCAAAGCTT+GGG - chr3_4:74252582-74252601 Msa0521440:CDS 40.0%
CAAAGCTTGGGATAATCTTC+TGG - chr3_4:74252594-74252613 Msa0521440:CDS 40.0%
! GGATAATCTTCTGGAGAACA+AGG - chr3_4:74252603-74252622 Msa0521440:CDS 40.0%
! GGTCTTGTATTAAGATACGG+AGG + chr3_4:74252652-74252671 None:intergenic 40.0%
!! ATAATGCTGCTTCTAGGACT+CGG + chr3_4:74252882-74252901 None:intergenic 40.0%
! TTGAAAAGGTTGGTTGTGTC+AGG + chr3_4:74253072-74253091 None:intergenic 40.0%
GAATCAGTCGTGAAGCTTAA+GGG - chr3_4:74253309-74253328 Msa0521440:intron 40.0%
GACAACCTTCAAGAAGAACA+GGG - chr3_4:74253380-74253399 Msa0521440:intron 40.0%
ATAGTATCTCCTCTAGCTAG+TGG + chr3_4:74253531-74253550 None:intergenic 40.0%
GCTAGACATGAAGTCAGAAA+AGG + chr3_4:74253730-74253749 None:intergenic 40.0%
!! CTCACCCTTTCACTGTTTTT+AGG + chr3_4:74253752-74253771 None:intergenic 40.0%
AACCCTTACTGCAACAAAGA+AGG - chr3_4:74253924-74253943 Msa0521440:intron 40.0%
GTTTAGTCGTAACCAATGAG+AGG - chr3_4:74254065-74254084 Msa0521440:five_prime_UTR 40.0%
!! AGCGGTTGGTTTGAGTCATA+GGG + chr3_4:74246676-74246695 None:intergenic 45.0%
TACTGAGTGATGCAGAGTCA+TGG + chr3_4:74246771-74246790 None:intergenic 45.0%
TTTGTGATATAGGAAGGGCG+TGG - chr3_4:74247169-74247188 Msa0521440:three_prime_UTR 45.0%
TCAGGAACGAATTCCAGTAG+AGG - chr3_4:74248018-74248037 Msa0521440:intron 45.0%
CAGCTGAAATGTTCAAGAGC+AGG - chr3_4:74248052-74248071 Msa0521440:intron 45.0%
GCAGGTTTAACATCAGACGA+AGG - chr3_4:74248070-74248089 Msa0521440:intron 45.0%
ACCAAACACTTGAAGCCTGT+TGG + chr3_4:74248098-74248117 None:intergenic 45.0%
ATGGCCATTGCTTTGGCTAA+TGG - chr3_4:74248214-74248233 Msa0521440:intron 45.0%
ACAAAATCCTGCCAATCAGG+AGG + chr3_4:74248250-74248269 None:intergenic 45.0%
CCAACAAAATCCTGCCAATC+AGG + chr3_4:74248253-74248272 None:intergenic 45.0%
! CCTGATTGGCAGGATTTTGT+TGG - chr3_4:74248250-74248269 Msa0521440:intron 45.0%
TGGTTTAGCCCCCAAAACAA+GGG - chr3_4:74248357-74248376 Msa0521440:CDS 45.0%
!! AGGTTCTAAGAGATGGTAGG+TGG - chr3_4:74249181-74249200 Msa0521440:intron 45.0%
TCTGAGGGATTCTTTGTTGC+CGG + chr3_4:74249345-74249364 None:intergenic 45.0%
!! CCCTCAGATGAAGTGTTTTC+TGG - chr3_4:74249357-74249376 Msa0521440:intron 45.0%
GAAGCAGTTGTCATTGCTAC+TGG - chr3_4:74249405-74249424 Msa0521440:intron 45.0%
GTTGACAGCACCAATCAAGT+TGG - chr3_4:74249462-74249481 Msa0521440:intron 45.0%
CAACACCGCAAGTATAGAGA+CGG - chr3_4:74249579-74249598 Msa0521440:CDS 45.0%
TCTGTGAGAACCAATAGCCA+TGG + chr3_4:74249673-74249692 None:intergenic 45.0%
ACAGCTATTGAGGAAATGGC+AGG - chr3_4:74249726-74249745 Msa0521440:CDS 45.0%
CAGCTATTGAGGAAATGGCA+GGG - chr3_4:74249727-74249746 Msa0521440:CDS 45.0%
TATTGAGGAAATGGCAGGGA+TGG - chr3_4:74249731-74249750 Msa0521440:CDS 45.0%
GCCATAGATGCTGCAATTGT+TGG - chr3_4:74249900-74249919 Msa0521440:intron 45.0%
GCCAACAATTGCAGCATCTA+TGG + chr3_4:74249904-74249923 None:intergenic 45.0%
GGAATCAAACTCGATACCTC+GGG - chr3_4:74249997-74250016 Msa0521440:CDS 45.0%
GAATCAAACTCGATACCTCG+GGG - chr3_4:74249998-74250017 Msa0521440:CDS 45.0%
! GGGTGTTATAATAAACCCCG+AGG + chr3_4:74250016-74250035 None:intergenic 45.0%
GTCTAGCAACACCCAAAGAA+CGG + chr3_4:74250449-74250468 None:intergenic 45.0%
!! TTCTTTGGGTGTTGCTAGAC+AGG - chr3_4:74250449-74250468 Msa0521440:CDS 45.0%
TGCCTAGGAGGATCAAATAG+AGG + chr3_4:74250632-74250651 None:intergenic 45.0%
GTTTCAGCACTATCATGCCT+AGG + chr3_4:74250647-74250666 None:intergenic 45.0%
AAGGTTCAGAGCTCTTGTGA+TGG + chr3_4:74250669-74250688 None:intergenic 45.0%
!! ATCACAAGAGCTCTGAACCT+TGG - chr3_4:74250668-74250687 Msa0521440:CDS 45.0%
TTGTTCCCATTCCAAGCCTT+CGG + chr3_4:74250841-74250860 None:intergenic 45.0%
TGACCGAGCAATGAAGAAGA+TGG + chr3_4:74250872-74250891 None:intergenic 45.0%
TTCATTGCTCGGTCAAAGCA+AGG - chr3_4:74250877-74250896 Msa0521440:intron 45.0%
! GAGTTGATTGAGAAGGCTGA+TGG - chr3_4:74250929-74250948 Msa0521440:intron 45.0%
!!! GGATTTGCTGGAGTTTTTCC+TGG - chr3_4:74250950-74250969 Msa0521440:CDS 45.0%
! TTGCTGGAGTTTTTCCTGGT+AGG - chr3_4:74250954-74250973 Msa0521440:CDS 45.0%
ATTGTTGTGAAGGACCTACC+AGG + chr3_4:74250971-74250990 None:intergenic 45.0%
GATATTGTCCTTACTGAGCC+TGG - chr3_4:74251231-74251250 Msa0521440:CDS 45.0%
GGCGATAATCAACACCATGA+AGG + chr3_4:74251621-74251640 None:intergenic 45.0%
AGTTTCCAACTGTCTGGTTG+TGG + chr3_4:74251785-74251804 None:intergenic 45.0%
TCTCTCAGTTTCCAACTGTC+TGG + chr3_4:74251791-74251810 None:intergenic 45.0%
!! TTTGCTACTGGTGTTGTGCT+AGG - chr3_4:74251815-74251834 Msa0521440:intron 45.0%
TGTTGTGCTAGGTAGCTACA+TGG - chr3_4:74251826-74251845 Msa0521440:intron 45.0%
CTACATGGCACTAATGACAG+TGG - chr3_4:74251841-74251860 Msa0521440:intron 45.0%
!!! GGTGTTTTTCTGGCTCATGA+AGG - chr3_4:74251862-74251881 Msa0521440:intron 45.0%
TTCAACAAAGGACCAGCTAC+GGG + chr3_4:74252100-74252119 None:intergenic 45.0%
TGGTCCTTTGTTGAAAGACC+TGG - chr3_4:74252105-74252124 Msa0521440:intron 45.0%
! AAGACCTGGTCTTCTCCTAT+TGG - chr3_4:74252119-74252138 Msa0521440:intron 45.0%
! AGACCTGGTCTTCTCCTATT+GGG - chr3_4:74252120-74252139 Msa0521440:intron 45.0%
TACGGAGGTAGTAAGACAGA+AGG + chr3_4:74252637-74252656 None:intergenic 45.0%
AAGAAGAGAGAGAAGCTCAG+TGG - chr3_4:74253010-74253029 Msa0521440:intron 45.0%
AGAAGAGAGAGAAGCTCAGT+GGG - chr3_4:74253011-74253030 Msa0521440:intron 45.0%
TCATCGAGTCTGTGTCTGAA+AGG - chr3_4:74253166-74253185 Msa0521440:intron 45.0%
TAGGGAGCTTCACACTCTAA+AGG - chr3_4:74253278-74253297 Msa0521440:intron 45.0%
AGGGAGCTTCACACTCTAAA+GGG - chr3_4:74253279-74253298 Msa0521440:intron 45.0%
CGAATCAGTCGTGAAGCTTA+AGG - chr3_4:74253308-74253327 Msa0521440:intron 45.0%
GGACAACCTTCAAGAAGAAC+AGG - chr3_4:74253379-74253398 Msa0521440:intron 45.0%
CGTAACCCTGTTCTTCTTGA+AGG + chr3_4:74253388-74253407 None:intergenic 45.0%
! AAAGGCATGCGACCACAATT+TGG - chr3_4:74253807-74253826 Msa0521440:intron 45.0%
AAGGCATGCGACCACAATTT+GGG - chr3_4:74253808-74253827 Msa0521440:intron 45.0%
!! CAGCGGTTGGTTTGAGTCAT+AGG + chr3_4:74246677-74246696 None:intergenic 50.0%
GTGAAGAAAGGGTGATGCAG+CGG + chr3_4:74246694-74246713 None:intergenic 50.0%
TGAACACTGTCCAACATGGG+AGG - chr3_4:74246838-74246857 Msa0521440:three_prime_UTR 50.0%
AAGGCTGATACCTCCCATGT+TGG + chr3_4:74246851-74246870 None:intergenic 50.0%
! CGTGGCGTGTTCTTGTGTTT+TGG - chr3_4:74247187-74247206 Msa0521440:three_prime_UTR 50.0%
TGCTCGAACACTTCCTCTAC+TGG + chr3_4:74248034-74248053 None:intergenic 50.0%
GCCAACAGGCTTCAAGTGTT+TGG - chr3_4:74248094-74248113 Msa0521440:intron 50.0%
GCCATTGCTTTGGCTAATGG+CGG - chr3_4:74248217-74248236 Msa0521440:intron 50.0%
ACCGCCATTAGCCAAAGCAA+TGG + chr3_4:74248221-74248240 None:intergenic 50.0%
ATTGCTTTGGCTAATGGCGG+TGG - chr3_4:74248220-74248239 Msa0521440:intron 50.0%
TAATGCTGCTGCTGCTCTCA+TGG - chr3_4:74248333-74248352 Msa0521440:CDS 50.0%
CTGGTTTAGCCCCCAAAACA+AGG - chr3_4:74248356-74248375 Msa0521440:CDS 50.0%
!! GATGCTGCAATTTTGGTCCC+AGG - chr3_4:74249213-74249232 Msa0521440:intron 50.0%
TGTTGCCGGAAGAGATTCTC+CGG + chr3_4:74249331-74249350 None:intergenic 50.0%
GTCCTCTGCAGTGACAAAAC+CGG - chr3_4:74249756-74249775 Msa0521440:CDS 50.0%
!! TTCCGGTTTTGTCACTGCAG+AGG + chr3_4:74249761-74249780 None:intergenic 50.0%
TAGAAGCCCTTGCTGCAAGA+AGG + chr3_4:74249863-74249882 None:intergenic 50.0%
TTCTTGCAGCAAGGGCTTCT+AGG - chr3_4:74249862-74249881 Msa0521440:intron 50.0%
!! GGCTTCTAGGACTGAGAATC+AGG - chr3_4:74249875-74249894 Msa0521440:intron 50.0%
! TGGCATGCTTGCTGATCCAA+AGG - chr3_4:74249920-74249939 Msa0521440:CDS 50.0%
! CATGCTTGCTGATCCAAAGG+AGG - chr3_4:74249923-74249942 Msa0521440:CDS 50.0%
GTTGTCGATGTGCAGTGTGT+GGG + chr3_4:74250036-74250055 None:intergenic 50.0%
AGTTGTCGATGTGCAGTGTG+TGG + chr3_4:74250037-74250056 None:intergenic 50.0%
TGAATTACACAGGCACGAGC+TGG - chr3_4:74250139-74250158 Msa0521440:intron 50.0%
GAACCTCTGCAACTGCAAAG+AGG - chr3_4:74250371-74250390 Msa0521440:intron 50.0%
CATCCTCTTTGCAGTTGCAG+AGG + chr3_4:74250377-74250396 None:intergenic 50.0%
GCAACTGCAAAGAGGATGTC+AGG - chr3_4:74250379-74250398 Msa0521440:intron 50.0%
CAAATTGCCATGGTGCACCA+GGG + chr3_4:74250598-74250617 None:intergenic 50.0%
ACAAATTGCCATGGTGCACC+AGG + chr3_4:74250599-74250618 None:intergenic 50.0%
GGTGCACCATGGCAATTTGT+TGG - chr3_4:74250599-74250618 Msa0521440:intron 50.0%
TCAGCACTATCATGCCTAGG+AGG + chr3_4:74250644-74250663 None:intergenic 50.0%
TGATCAGCTTGCCATTGCCA+AGG - chr3_4:74250808-74250827 Msa0521440:intron 50.0%
CTTGCCATTGCCAAGGAAAC+TGG - chr3_4:74250815-74250834 Msa0521440:intron 50.0%
!! GAGAAGGCTGATGGATTTGC+TGG - chr3_4:74250938-74250957 Msa0521440:intron 50.0%
!! TGGTACCTAGTAACGGGTGA+AGG + chr3_4:74251727-74251746 None:intergenic 50.0%
CAACTGTCTGGTTGTGGAGA+TGG + chr3_4:74251779-74251798 None:intergenic 50.0%
CATCTCCACAACCAGACAGT+TGG - chr3_4:74251777-74251796 Msa0521440:intron 50.0%
GGGCTGCCATCATTTCATCA+GGG + chr3_4:74252026-74252045 None:intergenic 50.0%
AGGGCTGCCATCATTTCATC+AGG + chr3_4:74252027-74252046 None:intergenic 50.0%
GTGGTCGTGGAGAAGAAATG+AGG + chr3_4:74252258-74252277 None:intergenic 50.0%
TTAAGGGAATGGGATGGGGT+TGG - chr3_4:74252488-74252507 Msa0521440:intron 50.0%
TAAGGGAATGGGATGGGGTT+GGG - chr3_4:74252489-74252508 Msa0521440:intron 50.0%
ACTGCTCAGAGGACTCTTCA+TGG - chr3_4:74253036-74253055 Msa0521440:intron 50.0%
TGCAACTTCAGCACGTCTCT+TGG + chr3_4:74253139-74253158 None:intergenic 50.0%
AGAGACGTGCTGAAGTTGCA+CGG - chr3_4:74253139-74253158 Msa0521440:intron 50.0%
TCCTCAATGCCACTAGCTAG+AGG - chr3_4:74253519-74253538 Msa0521440:intron 50.0%
TCCTCTAGCTAGTGGCATTG+AGG + chr3_4:74253523-74253542 None:intergenic 50.0%
AACTCATGTGTTGCGAGGTG+CGG + chr3_4:74253834-74253853 None:intergenic 50.0%
TCAAAACCAGCCAACCTGTC+CGG - chr3_4:74254199-74254218 Msa0521440:five_prime_UTR 50.0%
AGAAAGGGTGATGCAGCGGT+TGG + chr3_4:74246690-74246709 None:intergenic 55.0%
!! CATGGGAGGTATCAGCCTTG+AGG - chr3_4:74246852-74246871 Msa0521440:three_prime_UTR 55.0%
CATCAGACGAAGGAGCCAAC+AGG - chr3_4:74248080-74248099 Msa0521440:intron 55.0%
TGGAAGACCTCCTGATTGGC+AGG - chr3_4:74248240-74248259 Msa0521440:intron 55.0%
TCAAGCAGACGAGCATCAGC+AGG + chr3_4:74249273-74249292 None:intergenic 55.0%
TGCTGATGCTCGTCTGCTTG+AGG - chr3_4:74249272-74249291 Msa0521440:CDS 55.0%
GCTGATGCTCGTCTGCTTGA+GGG - chr3_4:74249273-74249292 Msa0521440:CDS 55.0%
!! TAGCAAAGGTGCTCCTGAGC+AGG - chr3_4:74250252-74250271 Msa0521440:CDS 55.0%
ATTGACAAGTTCGCCGAGCG+TGG - chr3_4:74250420-74250439 Msa0521440:CDS 55.0%
CAAAGAACGGAGTCCACGCT+CGG + chr3_4:74250436-74250455 None:intergenic 55.0%
GAGCGTGGACTCCGTTCTTT+GGG - chr3_4:74250435-74250454 Msa0521440:CDS 55.0%
AAGATAGCCCTGGTGCACCA+TGG - chr3_4:74250588-74250607 Msa0521440:intron 55.0%
TCGGCCAGTTTCCTTGGCAA+TGG + chr3_4:74250822-74250841 None:intergenic 55.0%
TTGCCAAGGAAACTGGCCGA+AGG - chr3_4:74250822-74250841 Msa0521440:intron 55.0%
AAGCCTTCGGCCAGTTTCCT+TGG + chr3_4:74250828-74250847 None:intergenic 55.0%
AAGGAAACTGGCCGAAGGCT+TGG - chr3_4:74250827-74250846 Msa0521440:intron 55.0%
AACTGGCCGAAGGCTTGGAA+TGG - chr3_4:74250832-74250851 Msa0521440:intron 55.0%
ACTGGCCGAAGGCTTGGAAT+GGG - chr3_4:74250833-74250852 Msa0521440:intron 55.0%
GATGCTACAGATGCCGCTAG+AGG - chr3_4:74251201-74251220 Msa0521440:CDS 55.0%
CACTCAGACCAGGCTCAGTA+AGG + chr3_4:74251242-74251261 None:intergenic 55.0%
GCACCCAATAGGAGAAGACC+AGG + chr3_4:74252126-74252145 None:intergenic 55.0%
CTAGGAGCTGCCTTATCAGC+TGG - chr3_4:74252372-74252391 Msa0521440:intron 55.0%
TGTGGCTGCAGCTGTTATCG+CGG - chr3_4:74253890-74253909 Msa0521440:intron 55.0%
GAAACGGTAACCGGACAGGT+TGG + chr3_4:74254212-74254231 None:intergenic 55.0%
GCGGTGGAAGACCTCCTGAT+TGG - chr3_4:74248236-74248255 Msa0521440:intron 60.0%
CAACTTGCGCTAGACCCCAG+TGG - chr3_4:74250052-74250071 Msa0521440:CDS 60.0%
! ACAGGCACGAGCTGGTGTCA+GGG - chr3_4:74250147-74250166 Msa0521440:intron 60.0%
CGAGCGTGGACTCCGTTCTT+TGG - chr3_4:74250434-74250453 Msa0521440:CDS 60.0%
TTGTCACCAGGTCCCGTAGC+TGG - chr3_4:74252085-74252104 Msa0521440:intron 60.0%
AAAGGACCAGCTACGGGACC+TGG + chr3_4:74252094-74252113 None:intergenic 60.0%
!! GGGGTTGGGCTGGTGTAATC+TGG - chr3_4:74252503-74252522 Msa0521440:intron 60.0%
CTCAGTGGGCAACTGCTCAG+AGG - chr3_4:74253025-74253044 Msa0521440:intron 60.0%
GCTGCTGCTGCTCTCATGGC+TGG - chr3_4:74248337-74248356 Msa0521440:CDS 65.0%
CACAGGCACGAGCTGGTGTC+AGG - chr3_4:74250146-74250165 Msa0521440:intron 65.0%
GGAATGGGATGGGGTTGGGC+TGG - chr3_4:74252493-74252512 Msa0521440:intron 65.0%
GCGAGGTGCGGCCCAAATTG+TGG + chr3_4:74253822-74253841 None:intergenic 65.0%
GGCTGCAGCTGTTATCGCGG+TGG - chr3_4:74253893-74253912 Msa0521440:intron 65.0%
! CGGTAACCGGACAGGTTGGC+TGG + chr3_4:74254208-74254227 None:intergenic 65.0%
! GGCACGAGCTGGTGTCAGGG+AGG - chr3_4:74250150-74250169 Msa0521440:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 74246651 74254232 74246651 ID=Msa0521440;Name=Msa0521440
chr3_4 mRNA 74246651 74254232 74246651 ID=Msa0521440-mRNA-1;Parent=Msa0521440;Name=Msa0521440-mRNA-1;_AED=0.07;_eAED=0.07;_QI=202|1|1|1|1|1|15|861|951
chr3_4 exon 74246651 74247608 74246651 ID=Msa0521440-mRNA-1:exon:20995;Parent=Msa0521440-mRNA-1
chr3_4 exon 74247723 74247904 74247723 ID=Msa0521440-mRNA-1:exon:20994;Parent=Msa0521440-mRNA-1
chr3_4 exon 74248259 74248441 74248259 ID=Msa0521440-mRNA-1:exon:20993;Parent=Msa0521440-mRNA-1
chr3_4 exon 74248719 74248892 74248719 ID=Msa0521440-mRNA-1:exon:20992;Parent=Msa0521440-mRNA-1
chr3_4 exon 74248982 74249142 74248982 ID=Msa0521440-mRNA-1:exon:20991;Parent=Msa0521440-mRNA-1
chr3_4 exon 74249230 74249311 74249230 ID=Msa0521440-mRNA-1:exon:20990;Parent=Msa0521440-mRNA-1
chr3_4 exon 74249445 74249477 74249445 ID=Msa0521440-mRNA-1:exon:20989;Parent=Msa0521440-mRNA-1
chr3_4 exon 74249563 74249801 74249563 ID=Msa0521440-mRNA-1:exon:20988;Parent=Msa0521440-mRNA-1
chr3_4 exon 74249912 74250076 74249912 ID=Msa0521440-mRNA-1:exon:20987;Parent=Msa0521440-mRNA-1
chr3_4 exon 74250170 74250314 74250170 ID=Msa0521440-mRNA-1:exon:20986;Parent=Msa0521440-mRNA-1
chr3_4 exon 74250413 74250517 74250413 ID=Msa0521440-mRNA-1:exon:20985;Parent=Msa0521440-mRNA-1
chr3_4 exon 74250610 74250732 74250610 ID=Msa0521440-mRNA-1:exon:20984;Parent=Msa0521440-mRNA-1
chr3_4 exon 74250939 74251700 74250939 ID=Msa0521440-mRNA-1:exon:20983;Parent=Msa0521440-mRNA-1
chr3_4 exon 74252505 74252861 74252505 ID=Msa0521440-mRNA-1:exon:20982;Parent=Msa0521440-mRNA-1
chr3_4 exon 74253983 74254232 74253983 ID=Msa0521440-mRNA-1:exon:20981;Parent=Msa0521440-mRNA-1
chr3_4 five_prime_UTR 74254031 74254232 74254031 ID=Msa0521440-mRNA-1:five_prime_utr;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74253983 74254030 74253983 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74252505 74252861 74252505 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74250939 74251700 74250939 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74250610 74250732 74250610 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74250413 74250517 74250413 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74250170 74250314 74250170 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74249912 74250076 74249912 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74249563 74249801 74249563 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74249445 74249477 74249445 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74249230 74249311 74249230 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74248982 74249142 74248982 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74248719 74248892 74248719 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74248259 74248441 74248259 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74247723 74247904 74247723 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 CDS 74247512 74247608 74247512 ID=Msa0521440-mRNA-1:cds;Parent=Msa0521440-mRNA-1
chr3_4 three_prime_UTR 74246651 74247511 74246651 ID=Msa0521440-mRNA-1:three_prime_utr;Parent=Msa0521440-mRNA-1
Gene Sequence

>Msa0521440

ATGGGAGGTATCAGCCTTGAGGAGATAAAAAACGAGAACGTTGATCTGGAACGAATTCCAGTAGAGGAAGTGTTCGAGCAGCTGAAATGTTCAAGAGCAGGTTTAACATCAGACGAAGGAGCCAACAGGCTTCAAGTGTTTGGTCCAAACAAATTGGAAGAGAAAAGGGAAAGCAAATTTTTGAAGTTCTTAGGATTTATGTGGAACCCTTTATCATGGGTTATGGAAGCTGCTGCTATTATGGCCATTGCTTTGGCTAATGGCGGTGGAAGACCTCCTGATTGGCAGGATTTTGTTGGTATCATTTCTCTTTTGGTTATTAACTCAACTATCAGTTTCATTGAAGAGAATAATGCTGGTAATGCTGCTGCTGCTCTCATGGCTGGTTTAGCCCCCAAAACAAGGGTTCTAAGAGATGGTAGGTGGTCTGAAGAAGATGCTGCAATTTTGGTCCCAGGTGATATCATCAGCATTAAATTAGGAGATATCATTCCTGCTGATGCTCGTCTGCTTGAGGGTGATGCTTTGAGTGTTGATCAGTCTGCTTTAACCGGAGAATCTCTTCCGGCAACAAAGAATCCCTCAGATGAAGTGTTTTCTGGTTCAACTGTTAAGAAAGGTGAGATTGAAGCAGTTGTCATTGCTACTGGAGTGCACACATTTTTTGGTAAAGCTGCTCATTTGGTTGACAGCACCAATCAAGTTGGTCACTTTCAGAAAGTCCTAACAGCAATTGGTAATTTCTGCATTTGCTCAATTGCTGTTGGAATACTGATTGAGCTCGTTGTCATGTATCCGATACAACACCGCAAGTATAGAGACGGAATTGACAATCTTTTGGTTCTATTGATTGGAGGAATTCCAATTGCTATGCCAACTGTTTTGTCTGTTACCATGGCTATTGGTTCTCACAGACTTTCTCAACAAGGTGCTATTACAAAGAGAATGACAGCTATTGAGGAAATGGCAGGGATGGATGTCCTCTGCAGTGACAAAACCGGAACTCTGACTTTAAATAAGTTATCTGTTGATAAAAACTTGATTGAGGTTTTTGCTAAGGGTGTAGAGAAGGATTATGTTATCCTTCTTGCAGCAAGGGCTTCTAGGACTGAGAATCAGGATGCCATAGATGCTGCAATTGTTGGCATGCTTGCTGATCCAAAGGAGGCACGAGCTGGTGTCAGGGAGGTTCATTTTTTCCCATTCAATCCTGTAGACAAGAGAACTGCTTTAACTTACATTGACTCTGACGGAAATTGGCATAGATCTAGCAAAGGTGCTCCTGAGCAGATATTGAACCTCTGCAACTGCAAAGAGGATGTCAGGAAAAAAGCTCATTCAACAATTGACAAGTTCGCCGAGCGTGGACTCCGTTCTTTGGGTGTTGCTAGACAGGAAATACCTGAGAAAGATAAAGATAGCCCTGGTGCACCATGGCAATTTGTTGGTCTGTTACCTCTATTTGATCCTCCTAGGCATGATAGTGCTGAAACCATCACAAGAGCTCTGAACCTTGGTGTGAATGTTAAGATGATTACTGGTGATCAGCTTGCCATTGCCAAGGAAACTGGCCGAAGGCTTGGAATGGGAACAAACATGTATCCATCTTCTTCATTGCTCGGTCAAAGCAAGGATGCTGCTGTTTCAGCTCTTCCAGTTGATGAGTTGATTGAGAAGGCTGATGGATTTGCTGGAGTTTTTCCTGAACACAAGTATGAAATCGTAAAGAAACTGCAAGAGAGGAAACATATATGTGGAATGACAGGTGATGGTGTCAACGACGCTCCTGCGTTAAAGAGAGCAGATATTGGAATTGCTGTTGCTGATGCTACAGATGCCGCTAGAGGTGCTTCTGATATTGTCCTTACTGAGCCTGGTCTGAGTGTCATTATTAGTGCAGTGCTCACAAGCAGAGCAATTTTCCAAAGGATGAAGAACTATACTATCTACGCTGTGTCAATTACCATTCGTATTGTGTTTGGTTTCATGTTCATTGCCTTGATCTGGAAGTTTGATTTTGCACCCTTCATGGTGTTGATTATCGCCATACTAAATGATGGTACCATTATGACAATATCCAAGGATAGAGTGAAACCATCTCCACAACCAGACAGTTGGAAACTGAGAGAGATATTTGCTACTGGTGTTGTGCTAGGTAGCTACATGGCACTAATGACAGTGGTGTTTTTCTGGCTCATGAAGGATACCGATTTCTTCTCGGACAAGTTTGGTGTGAGATCTATCCGAAAAAACCCTGATGAAATGATGGCAGCCCTCTACCTACAAGTCAGTATTATAAGTCAGGCACTAATTTTTGTCACCAGGTCCCGTAGCTGGTCCTTTGTTGAAAGACCTGGTCTTCTCCTATTGGGTGCTTTTATGATTGCTCAGCTGGTGGCAACTTTTATAGCAGTATATGCTAATTGGAGCTTTGCAAGAATTAAGGGAATGGGATGGGGTTGGGCTGGTGTAATCTGGATGTACAGTATAGTGACATATATCCCCCTTGATATACTCAAATTCGTAATCCGCTATGTTCTAAGTGGCAAAGCTTGGGATAATCTTCTGGAGAACAAGACTGCTTTCACAACAAAGAAAGACTATGGCAAAGAAGAGAGAGAAGCTCAGTGGGCAACTGCTCAGAGGACTCTTCATGGTCTTCAGTCACCTGACACAACCAACCTTTTCAATGACAAGAATAGCTACAGGGAGCTTTCTGAGATTGCTGAGCAAGCCAAGAGACGTGCTGAAGTTGCACGGCTTAGGGAGCTTCACACTCTAAAGGGTCATGTCGAATCAGTCGTGAAGCTTAAGGGACTTGATATCGACACTATGCAACAACATTATACTGTTTAA
Protein sequence

>Msa0521440

MGGISLEEIKNENVDLERIPVEEVFEQLKCSRAGLTSDEGANRLQVFGPNKLEEKRESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIISLLVINSTISFIEENNAGNAAAALMAGLAPKTRVLRDGRWSEEDAAILVPGDIISIKLGDIIPADARLLEGDALSVDQSALTGESLPATKNPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGILIELVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKDYVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYIDSDGNWHRSSKGAPEQILNLCNCKEDVRKKAHSTIDKFAERGLRSLGVARQEIPEKDKDSPGAPWQFVGLLPLFDPPRHDSAETITRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQSKDAAVSALPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLREIFATGVVLGSYMALMTVVFFWLMKDTDFFSDKFGVRSIRKNPDEMMAALYLQVSIISQALIFVTRSRSWSFVERPGLLLLGAFMIAQLVATFIAVYANWSFARIKGMGWGWAGVIWMYSIVTYIPLDILKFVIRYVLSGKAWDNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQSPDTTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTMQQHYTV*