AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0866960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0866960 MtrunA17_Chr3g0138931 92.324 951 8 7 1 886 1 951 0.0 1748
Msa0866960 MtrunA17_Chr1g0148031 86.120 951 67 7 1 886 1 951 0.0 1605
Msa0866960 MtrunA17_Chr4g0072131 81.224 948 111 8 4 886 7 952 0.0 1529
Msa0866960 MtrunA17_Chr2g0298031 80.882 952 115 9 2 886 7 958 0.0 1505
Msa0866960 MtrunA17_Chr8g0365021 78.359 975 120 9 1 886 71 1043 0.0 1484
Msa0866960 MtrunA17_Chr1g0147981 81.303 936 109 8 16 886 33 967 0.0 1483
Msa0866960 MtrunA17_Chr2g0333721 77.930 947 144 7 5 886 3 949 0.0 1457
Msa0866960 MtrunA17_Chr4g0065481 76.321 946 155 8 6 886 7 948 0.0 1422
Msa0866960 MtrunA17_Chr4g0059961 75.499 951 163 9 5 886 9 958 0.0 1392
Msa0866960 MtrunA17_Chr6g0452721 73.502 951 182 9 5 886 7 956 0.0 1372
Msa0866960 MtrunA17_Chr2g0304941 75.748 903 150 8 4 841 5 903 0.0 1348
Msa0866960 MtrunA17_Chr8g0335291 70.466 965 203 13 2 886 4 966 0.0 1280
Msa0866960 MtrunA17_Chr7g0276551 71.208 712 164 7 211 886 6 712 0.0 1029
Msa0866960 MtrunA17_Chr7g0276541 65.587 247 44 5 7 212 14 260 5.60e-84 271
Msa0866960 MtrunA17_Chr8g0381711 24.390 656 409 15 48 625 57 703 6.05e-45 175
Msa0866960 MtrunA17_Chr4g0054021 24.869 571 336 17 127 609 180 745 1.31e-38 155
Msa0866960 MtrunA17_Chr5g0401211 24.916 594 337 17 127 627 255 832 1.13e-37 152
Msa0866960 MtrunA17_Chr1g0173111 24.269 684 398 22 46 624 158 826 1.48e-37 152
Msa0866960 MtrunA17_Chr2g0298871 24.399 582 341 14 127 609 293 874 2.06e-37 152
Msa0866960 MtrunA17_Chr3g0134771 24.964 689 393 24 46 627 163 834 4.11e-37 150
Msa0866960 MtrunA17_Chr8g0355421 25.043 583 334 18 127 613 245 820 5.92e-37 150
Msa0866960 MtrunA17_Chr8g0382071 23.966 701 399 25 40 624 147 829 5.97e-35 144
Msa0866960 MtrunA17_Chr4g0002331 23.973 584 341 15 127 609 306 887 1.53e-34 142
Msa0866960 MtrunA17_Chr7g0260401 24.191 587 338 14 130 609 265 851 2.72e-34 142
Msa0866960 MtrunA17_Chr6g0456201 24.274 585 341 14 127 609 234 818 8.39e-34 140
Msa0866960 MtrunA17_Chr3g0134951 31.176 340 197 10 377 684 510 844 8.84e-34 140
Msa0866960 MtrunA17_Chr3g0134951 29.000 300 165 11 57 312 64 359 2.89e-18 90.5
Msa0866960 MtrunA17_Chr5g0413881 71.795 78 21 1 342 418 5 82 4.99e-33 124
Msa0866960 MtrunA17_Chr5g0413881 93.333 30 2 0 613 642 83 112 4.49e-11 62.0
Msa0866960 MtrunA17_Chr1g0181471 85.246 61 9 0 407 467 29 89 1.54e-29 112
Msa0866960 MtrunA17_Chr5g0423831 68.919 74 23 0 343 416 55 128 1.51e-28 114
Msa0866960 MtrunA17_Chr6g0474841 68.919 74 23 0 343 416 55 128 1.63e-28 114
Msa0866960 MtrunA17_Chr8g0346461 28.866 388 219 11 348 685 503 883 2.12e-27 119
Msa0866960 MtrunA17_Chr8g0346461 27.473 364 189 12 21 311 19 380 4.10e-22 102
Msa0866960 MtrunA17_Chr7g0263361 34.962 266 152 7 434 683 626 886 5.22e-26 115
Msa0866960 MtrunA17_Chr7g0263361 26.273 373 188 12 21 312 31 397 2.62e-20 97.1
Msa0866960 MtrunA17_Chr2g0297051 23.360 625 387 14 33 609 386 966 5.01e-25 112
Msa0866960 MtrunA17_Chr4g0020551 26.277 274 180 7 354 609 488 757 2.01e-23 107
Msa0866960 MtrunA17_Chr4g0020551 22.684 313 189 10 46 312 92 397 3.71e-12 70.5
Msa0866960 MtrunA17_Chr8g0339181 24.309 543 319 15 120 620 430 922 1.40e-22 104
Msa0866960 MtrunA17_Chr8g0340261 25.899 278 183 5 355 609 93 370 9.08e-20 94.4
Msa0866960 MtrunA17_Chr5g0397621 23.090 589 340 19 84 617 319 849 2.62e-19 93.6
Msa0866960 MtrunA17_Chr4g0052521 22.059 544 337 14 121 620 448 948 3.30e-19 93.6
Msa0866960 MtrunA17_Chr4g0050431 25.044 571 335 19 80 613 362 876 4.42e-19 92.8
Msa0866960 MtrunA17_Chr8g0374391 30.846 201 104 3 433 630 34 202 1.78e-18 85.9
Msa0866960 MtrunA17_Chr8g0374331 30.348 201 105 3 433 630 41 209 1.97e-18 85.9
Msa0866960 MtrunA17_Chr3g0136331 24.226 549 309 19 130 627 363 855 5.51e-17 86.3
Msa0866960 MtrunA17_Chr4g0071991 23.876 645 382 25 46 638 106 693 1.38e-16 85.1
Msa0866960 MtrunA17_Chr2g0334231 27.434 226 130 6 127 318 287 512 4.22e-15 79.3
Msa0866960 MtrunA17_Chr2g0334221 25.738 237 154 4 342 556 98 334 2.12e-13 72.8
Msa0866960 MtrunA17_Chr8g0340271 24.498 249 147 7 127 338 232 476 1.41e-12 71.2
Msa0866960 MtrunA17_Chr1g0148011 66.667 42 13 1 795 836 71 111 1.41e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0866960 AT2G24520.2 80.084 949 124 7 3 886 46 994 0.0 1518
Msa0866960 AT2G24520.3 80.344 931 118 7 21 886 1 931 0.0 1497
Msa0866960 AT2G24520.1 80.344 931 118 7 21 886 1 931 0.0 1497
Msa0866960 AT2G18960.1 80.021 946 124 7 6 886 4 949 0.0 1467
Msa0866960 AT3G42640.1 78.881 947 131 9 5 886 6 948 0.0 1466
Msa0866960 AT2G07560.1 78.376 948 137 9 4 886 5 949 0.0 1464
Msa0866960 AT4G30190.1 79.937 947 124 8 5 886 3 948 0.0 1464
Msa0866960 AT5G57350.4 79.175 946 131 8 6 886 5 949 0.0 1453
Msa0866960 AT5G57350.2 79.175 946 131 8 6 886 5 949 0.0 1453
Msa0866960 AT5G57350.1 79.175 946 131 8 6 886 5 949 0.0 1453
Msa0866960 AT1G80660.1 77.719 947 146 7 5 886 8 954 0.0 1447
Msa0866960 AT4G30190.2 77.245 980 124 9 5 886 3 981 0.0 1445
Msa0866960 AT2G18960.3 81.921 885 112 6 50 886 1 885 0.0 1405
Msa0866960 AT2G18960.2 81.921 885 112 6 50 886 1 885 0.0 1405
Msa0866960 AT1G80660.3 77.560 918 141 7 5 857 8 925 0.0 1396
Msa0866960 AT1G80660.4 77.560 918 141 7 5 857 8 925 0.0 1395
Msa0866960 AT5G62670.1 75.474 950 163 9 6 886 8 956 0.0 1393
Msa0866960 AT3G47950.1 75.789 950 160 11 6 886 12 960 0.0 1391
Msa0866960 AT3G47950.2 75.789 950 160 11 6 886 12 960 0.0 1391
Msa0866960 AT1G80660.2 78.788 825 127 6 110 886 1 825 0.0 1326
Msa0866960 AT3G60330.4 68.158 961 222 12 5 886 6 961 0.0 1265
Msa0866960 AT3G60330.3 68.158 961 222 12 5 886 6 961 0.0 1265
Msa0866960 AT3G60330.2 67.950 961 224 12 5 886 6 961 0.0 1262
Msa0866960 AT3G60330.1 67.950 961 224 12 5 886 6 961 0.0 1262
Msa0866960 AT1G17260.1 66.138 945 245 10 7 886 13 947 0.0 1193
Msa0866960 AT2G24520.4 82.994 688 81 4 235 886 1 688 0.0 1170
Msa0866960 AT5G57350.3 79.506 688 104 5 235 886 1 687 0.0 1113
Msa0866960 AT4G11730.1 58.405 464 136 10 3 416 4 460 2.46e-165 502
Msa0866960 AT4G11730.1 70.438 274 79 2 522 794 480 752 2.48e-118 379
Msa0866960 AT5G57110.1 24.742 582 336 15 127 609 274 852 1.19e-39 159
Msa0866960 AT5G57110.3 24.742 582 336 15 127 609 274 852 1.19e-39 159
Msa0866960 AT5G57110.2 24.742 582 336 15 127 609 274 852 1.19e-39 159
Msa0866960 AT3G22910.1 25.907 579 328 16 127 609 241 814 1.47e-39 159
Msa0866960 AT4G29900.1 25.507 592 323 15 127 609 274 856 2.75e-39 158
Msa0866960 AT4G29900.2 25.507 592 323 15 127 609 274 856 2.75e-39 158
Msa0866960 AT1G27770.4 24.096 581 332 18 127 609 256 825 9.68e-38 153
Msa0866960 AT1G27770.1 24.096 581 332 18 127 609 256 825 9.68e-38 153
Msa0866960 AT1G27770.3 24.096 581 332 18 127 609 193 762 1.02e-37 153
Msa0866960 AT4G37640.1 24.479 576 335 16 127 609 254 822 1.96e-37 152
Msa0866960 AT2G22950.1 25.084 594 337 18 127 627 255 833 1.00e-36 150
Msa0866960 AT3G57330.1 23.495 681 401 22 46 624 158 820 1.32e-35 146
Msa0866960 AT3G57330.2 23.495 681 401 22 46 624 103 765 1.50e-35 146
Msa0866960 AT1G10130.1 27.439 492 300 18 377 817 510 995 7.53e-35 144
Msa0866960 AT1G10130.1 29.431 299 165 10 57 312 64 359 1.09e-18 92.0
Msa0866960 AT2G41560.2 23.891 586 345 16 127 624 149 721 3.54e-33 138
Msa0866960 AT2G41560.3 23.891 586 345 16 127 624 149 721 3.54e-33 138
Msa0866960 AT2G41560.4 23.891 586 345 16 127 624 149 721 3.54e-33 138
Msa0866960 AT2G41560.1 23.891 586 345 16 127 624 251 823 5.69e-33 138
Msa0866960 AT3G21180.1 23.077 585 345 14 127 609 288 869 6.71e-32 134
Msa0866960 AT4G00900.2 31.122 392 205 15 348 685 499 879 2.47e-30 129
Msa0866960 AT4G00900.2 25.269 372 191 13 21 311 14 379 2.90e-18 90.9
Msa0866960 AT4G00900.1 31.122 392 205 15 348 685 499 879 2.47e-30 129
Msa0866960 AT4G00900.1 25.269 372 191 13 21 311 14 379 2.90e-18 90.9
Msa0866960 AT3G63380.1 23.951 572 331 17 135 609 254 818 4.78e-30 129
Msa0866960 AT1G07670.2 31.935 310 170 9 410 683 577 881 2.87e-26 116
Msa0866960 AT1G07670.2 26.776 366 193 14 21 312 31 395 1.44e-17 88.6
Msa0866960 AT1G07670.1 31.935 310 170 9 410 683 577 881 2.87e-26 116
Msa0866960 AT1G07670.1 26.776 366 193 14 21 312 31 395 1.44e-17 88.6
Msa0866960 AT1G07810.1 28.571 378 207 11 359 683 514 881 1.12e-25 114
Msa0866960 AT1G07810.1 27.049 366 192 14 21 312 31 395 1.34e-17 88.6
Msa0866960 AT5G44790.1 25.000 552 316 15 118 620 455 957 1.65e-24 110
Msa0866960 AT1G63440.1 24.698 579 344 16 84 617 412 943 2.21e-24 110
Msa0866960 AT5G21930.2 23.757 543 320 18 130 627 354 847 5.08e-21 99.8
Msa0866960 AT5G21930.1 23.757 543 320 18 130 627 354 847 5.08e-21 99.8
Msa0866960 AT5G21930.3 24.381 525 316 17 130 627 354 824 8.02e-20 95.5
Msa0866960 AT1G27770.2 24.424 434 231 15 127 468 256 684 1.04e-16 85.9
Msa0866960 AT4G33520.2 21.640 573 369 13 130 663 410 941 5.19e-14 77.0
Msa0866960 AT4G33520.3 22.727 506 324 11 130 609 410 874 6.15e-14 76.6
Msa0866960 AT5G53010.1 21.693 567 352 16 127 609 300 858 8.12e-14 76.3

Find 250 sgRNAs with CRISPR-Local

Find 456 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAGCTTTGCAAGAATTA+AGG 0.202354 5_4:-69039089 Msa0866960:CDS
TGTTGGTATCATTTCTCTTT+TGG 0.205719 5_4:-69043286 Msa0866960:CDS
ACATTGACTCTGACGGAAAT+TGG 0.218673 5_4:-69041333 Msa0866960:CDS
CGAGCGTGGACTCCGTTCTT+TGG 0.218966 5_4:-69041120 Msa0866960:CDS
TGAAGAAGATGCTGCAATTT+TGG 0.219025 5_4:-69042348 Msa0866960:CDS
AAAGGCATGCGACCACAATT+TGG 0.235638 5_4:-69037753 Msa0866960:three_prime_UTR
TTATAGCAGTATATGCTAAT+TGG 0.236742 5_4:-69039108 Msa0866960:CDS
AACATTATCTGGTATATATT+AGG 0.238496 5_4:-69037441 Msa0866960:three_prime_UTR
ATCCTATCAACCATGTTATT+TGG 0.247719 5_4:+69037998 None:intergenic
AATAATTATATACCCTTGTT+TGG 0.252353 5_4:+69043185 None:intergenic
GGGGTTGGGCTGGTGTAATC+TGG 0.254805 5_4:-69039057 Msa0866960:CDS
TATGGAAGCTGCTGCTATTA+TGG 0.264670 5_4:-69043358 Msa0866960:CDS
GCAGATACATTAACATTATC+TGG 0.282151 5_4:-69037452 Msa0866960:three_prime_UTR
TTCTTGCAGCAAGGGCTTCT+AGG 0.285624 5_4:-69041692 Msa0866960:CDS
ATAATTATATACCCTTGTTT+GGG 0.296010 5_4:+69043186 None:intergenic
TGCTATTATGGCCATTGCTT+TGG 0.300734 5_4:-69043346 Msa0866960:CDS
CAGCGGTTGGTTTGAGTCAT+AGG 0.306940 5_4:+69044893 None:intergenic
GCCAACAATTGCAGCATCTA+TGG 0.309947 5_4:+69041653 None:intergenic
TATCTCACCATCATTTAGTA+TGG 0.316399 5_4:+69039923 None:intergenic
TGGAGCTTTGCAAGAATTAA+GGG 0.318513 5_4:-69039088 Msa0866960:CDS
GATATCATCAGCATTAAATT+AGG 0.323247 5_4:-69042317 Msa0866960:CDS
AGACGGAATTGACAATCTTT+TGG 0.337942 5_4:-69041958 Msa0866960:CDS
AAGACCTGGTCTTCTCCTAT+TGG 0.340057 5_4:-69039441 Msa0866960:CDS
TTGTCTGTTACCATGGCTAT+TGG 0.341742 5_4:-69041894 Msa0866960:CDS
CGTAACCCTGTTCTTCTTGA+AGG 0.343646 5_4:+69038175 None:intergenic
CTATTAAGACTCTGTGTGTT+TGG 0.344787 5_4:-69044755 Msa0866960:five_prime_UTR
GAACCCTTTATCATGGGTTA+TGG 0.350255 5_4:-69043376 Msa0866960:CDS
ATGGCCATTGCTTTGGCTAA+TGG 0.350781 5_4:-69043339 Msa0866960:CDS
ATCCTTGGATATTGTCATAA+TGG 0.352453 5_4:+69039816 None:intergenic
TCTGAGGGATTCTTTGTTGC+CGG 0.354428 5_4:+69042212 None:intergenic
AGAAATTACCAATTGCTGTT+AGG 0.354571 5_4:+69042054 None:intergenic
TTTCCTTCTTTGTTGCAGTA+AGG 0.354691 5_4:+69037633 None:intergenic
CTATTATTGCAGGACAAGTT+TGG 0.356032 5_4:-69039581 Msa0866960:intron
TTCTTTGGGTGTTGCTAGAC+AGG 0.356432 5_4:-69041105 Msa0866960:intron
GAGCGTGGACTCCGTTCTTT+GGG 0.361280 5_4:-69041119 Msa0866960:CDS
TAAGGGAATGGGATGGGGTT+GGG 0.365555 5_4:-69039071 Msa0866960:CDS
GGCTTCTAGGACTGAGAATC+AGG 0.365755 5_4:-69041679 Msa0866960:CDS
CTTGCCATTGCCAAGGAAAC+TGG 0.367359 5_4:-69040747 Msa0866960:CDS
CGAATCAGTCGTGAAGCTTA+AGG 0.367521 5_4:-69038252 Msa0866960:CDS
CTGAAAGTGACCAACTTGAT+TGG 0.369358 5_4:+69042082 None:intergenic
GCTTCCATAACCCATGATAA+AGG 0.369885 5_4:+69043372 None:intergenic
CCAACAAAATCCTGCCAATC+AGG 0.370205 5_4:+69043303 None:intergenic
GACTTATAATACTGACTTGT+AGG 0.372124 5_4:+69039510 None:intergenic
GGAATGGGATGGGGTTGGGC+TGG 0.376471 5_4:-69039067 Msa0866960:CDS
CAGTATAGTTCTTCATCCTT+TGG 0.376619 5_4:+69040263 None:intergenic
CACAGGCACGAGCTGGTGTC+AGG 0.380163 5_4:-69041408 Msa0866960:intron
TGCATTTGCTCAATTGCTGT+TGG 0.380271 5_4:-69042032 Msa0866960:CDS
CAGAAAGTCCTAACAGCAAT+TGG 0.384030 5_4:-69042062 Msa0866960:CDS
GCTGCTGCTGCTCTCATGGC+TGG 0.384035 5_4:-69043216 Msa0866960:CDS
TTCTCAATCAACTCATCAAC+TGG 0.387666 5_4:+69040642 None:intergenic
TCATGTTCATTGCCTTGATC+TGG 0.387843 5_4:-69039983 Msa0866960:CDS
AGTTTCCAACTGTCTGGTTG+TGG 0.392732 5_4:+69039778 None:intergenic
AAGGCATGCGACCACAATTT+GGG 0.393874 5_4:-69037752 Msa0866960:three_prime_UTR
AGGGCTGCCATCATTTCATC+AGG 0.394338 5_4:+69039536 None:intergenic
CAACTGTCTGGTTGTGGAGA+TGG 0.394486 5_4:+69039784 None:intergenic
AGAGGAGATACTATTCTCTT+AGG 0.395076 5_4:-69038023 Msa0866960:three_prime_UTR
GGACAACCTTCAAGAAGAAC+AGG 0.399173 5_4:-69038181 Msa0866960:three_prime_UTR
GGGCTATCTTTATCTTTCTC+AGG 0.399203 5_4:+69040979 None:intergenic
AAAACAGTTGGCATAGCAAT+TGG 0.400400 5_4:+69041915 None:intergenic
TTCCTTCTTTGTTGCAGTAA+GGG 0.401327 5_4:+69037634 None:intergenic
ATTATACTGTTTAAGAAGCT+TGG 0.403584 5_4:-69038202 Msa0866960:exon
CTTATTTAAAGTCAGAGTTC+CGG 0.405876 5_4:+69041779 None:intergenic
CTCTTGTCTACAGGATTGAA+TGG 0.408748 5_4:+69041370 None:intergenic
TCTCTCAGTTTCCAACTGTC+TGG 0.408905 5_4:+69039772 None:intergenic
TTCACAACAAAGAAAGACTA+TGG 0.408967 5_4:-69038575 Msa0866960:CDS
GTTGATCAGTCTGCTTTAAC+CGG 0.412458 5_4:-69042245 Msa0866960:CDS
TAATGCTGCTGCTGCTCTCA+TGG 0.415083 5_4:-69043220 Msa0866960:CDS
AACAAATAGTTTACCTGCTC+AGG 0.416210 5_4:+69041289 None:intergenic
TTGTTCCCATTCCAAGCCTT+CGG 0.418174 5_4:+69040724 None:intergenic
AGACCTGGTCTTCTCCTATT+GGG 0.419290 5_4:-69039440 Msa0866960:CDS
GCTGATGCTCGTCTGCTTGA+GGG 0.419597 5_4:-69042281 Msa0866960:CDS
AATGACAGCTATTGAGGAAA+TGG 0.420930 5_4:-69041832 Msa0866960:CDS
GAGAAGGCTGATGGATTTGC+TGG 0.421728 5_4:-69040624 Msa0866960:CDS
AAAGCAGTTCTCTTGTCTAC+AGG 0.423643 5_4:+69041361 None:intergenic
AAGGAAACTGGCCGAAGGCT+TGG 0.428150 5_4:-69040735 Msa0866960:CDS
AAGCCTTCGGCCAGTTTCCT+TGG 0.428791 5_4:+69040737 None:intergenic
GTGAATGTTAAGATGATTAC+TGG 0.436771 5_4:-69040862 Msa0866960:intron
GAAGCAGTTGTCATTGCTAC+TGG 0.437520 5_4:-69042149 Msa0866960:CDS
TTGTCACCAGGTCCCGTAGC+TGG 0.443803 5_4:-69039475 Msa0866960:CDS
GAATCAGTCGTGAAGCTTAA+GGG 0.446216 5_4:-69038251 Msa0866960:CDS
TAAATTTGTTCACAGGCTTA+GGG 0.449466 5_4:-69038300 Msa0866960:intron
TGCAACTTCAGCACGTCTCT+TGG 0.453611 5_4:+69038424 None:intergenic
AAGAATTAAGGGAATGGGAT+GGG 0.454877 5_4:-69039077 Msa0866960:CDS
ACTGCTCAGAGGACTCTTCA+TGG 0.455575 5_4:-69038524 Msa0866960:CDS
TGAAGTTCTTAGGATTTATG+TGG 0.456304 5_4:-69043398 Msa0866960:intron
GAAGGATACCGATTTCTTCT+CGG 0.456878 5_4:-69039680 Msa0866960:intron
TTGAAAAGGTTGGTTGTGTC+AGG 0.456888 5_4:+69038491 None:intergenic
GTCAATTACCATTCGTATTG+TGG 0.456935 5_4:-69040145 Msa0866960:intron
CGGTAACCGGACAGGTTGGC+TGG 0.459017 5_4:+69037351 None:intergenic
AGAATTAAGGGAATGGGATG+GGG 0.459676 5_4:-69039076 Msa0866960:CDS
TTATGTGGAACCCTTTATCA+TGG 0.461954 5_4:-69043383 Msa0866960:CDS
CAATCATAAAAGCACCCAAT+AGG 0.462642 5_4:+69039426 None:intergenic
TATCCATCTTCTTCATTGCT+CGG 0.463155 5_4:-69040696 Msa0866960:CDS
GCGTTAAAGAGAGCAGATAT+TGG 0.463815 5_4:-69040397 Msa0866960:CDS
GCAACTGCAAAGAGGATGTC+AGG 0.465143 5_4:-69041175 Msa0866960:CDS
GATATTGTCCTTACTGAGCC+TGG 0.466202 5_4:-69040331 Msa0866960:CDS
CTATACTTGCGGTGTTGTAT+CGG 0.467501 5_4:+69041981 None:intergenic
AGCTATTCTTGTCATTGAAA+AGG 0.467817 5_4:+69038477 None:intergenic
CTTCCATAACCCATGATAAA+GGG 0.468799 5_4:+69043373 None:intergenic
ACAAATTGCCATGGTGCACC+AGG 0.469750 5_4:+69040958 None:intergenic
AGGGAGCTTCACACTCTAAA+GGG 0.473612 5_4:-69038281 Msa0866960:CDS
AAAGAGAATGACAGCTATTG+AGG 0.476115 5_4:-69041838 Msa0866960:CDS
TACCAAATAACATGGTTGAT+AGG 0.477229 5_4:-69038000 Msa0866960:three_prime_UTR
TTAAGGGAATGGGATGGGGT+TGG 0.477879 5_4:-69039072 Msa0866960:CDS
CATCCTCTTTGCAGTTGCAG+AGG 0.478214 5_4:+69041180 None:intergenic
AATTATTACCGAGAAGAAAT+CGG 0.479237 5_4:+69039672 None:intergenic
TTTGCTACTGGTGTTGTGCT+AGG 0.479390 5_4:-69039745 Msa0866960:CDS
GGTGCACCATGGCAATTTGT+TGG 0.479985 5_4:-69040955 Msa0866960:CDS
TTACGAATTTGAGTATATCA+AGG 0.480257 5_4:+69039008 None:intergenic
AGATGGTTTCACTCTATCCT+TGG 0.480543 5_4:+69039801 None:intergenic
TCAATGACAAGAATAGCTAC+AGG 0.482223 5_4:-69038472 Msa0866960:CDS
TTCATTGAAGAGAATAATGC+TGG 0.482524 5_4:-69043243 Msa0866960:CDS
TGCTCGAACACTTCCTCTAC+TGG 0.482543 5_4:+69043522 None:intergenic
TTTAACCGGAGAATCTCTTC+CGG 0.485484 5_4:-69042231 Msa0866960:CDS
ATTCTTGTCATTGAAAAGGT+TGG 0.486676 5_4:+69038481 None:intergenic
GTCCTCTGCAGTGACAAAAC+CGG 0.488160 5_4:-69041798 Msa0866960:CDS
TAGGGAGCTTCACACTCTAA+AGG 0.489909 5_4:-69038282 Msa0866960:CDS
ATTGCTTTGGCTAATGGCGG+TGG 0.494736 5_4:-69043333 Msa0866960:CDS
TGCTGATGCTCGTCTGCTTG+AGG 0.496020 5_4:-69042282 Msa0866960:CDS
ACAAGTCAGTATTATAAGTC+AGG 0.496065 5_4:-69039507 Msa0866960:CDS
TGTTATCCTTCTTGCAGCAA+GGG 0.497356 5_4:-69041700 Msa0866960:CDS
TCATGGAACAATATAAATGC+AGG 0.498216 5_4:+69044814 None:intergenic
TTTGCAAGAATTAAGGGAAT+GGG 0.499506 5_4:-69039082 Msa0866960:CDS
AAACATATATGTGGAATGAC+AGG 0.500678 5_4:-69040442 Msa0866960:CDS
TGGAAGACCTCCTGATTGGC+AGG 0.503131 5_4:-69043313 Msa0866960:CDS
AACTGGCCGAAGGCTTGGAA+TGG 0.503926 5_4:-69040730 Msa0866960:CDS
CAGCTGAAATGTTCAAGAGC+AGG 0.504044 5_4:-69043501 Msa0866960:CDS
TAGCAAAGGTGCTCCTGAGC+AGG 0.507970 5_4:-69041302 Msa0866960:intron
TCTTGTCTACAGGATTGAAT+GGG 0.508672 5_4:+69041371 None:intergenic
ATTGTATTCATAGGTAGAAA+CGG 0.510261 5_4:+69037331 None:intergenic
CATCAGACGAAGGAGCCAAC+AGG 0.511617 5_4:-69043473 Msa0866960:CDS
TCGGCCAGTTTCCTTGGCAA+TGG 0.513300 5_4:+69040743 None:intergenic
AAAATCAAACTTCCAGATCA+AGG 0.513418 5_4:+69039971 None:intergenic
ATATCTGCTCTCTTTAACGC+AGG 0.513794 5_4:+69040400 None:intergenic
TCATAGGTAGAAACGGTAAC+CGG 0.515272 5_4:+69037338 None:intergenic
GCTAGACATGAAGTCAGAAA+AGG 0.517281 5_4:+69037833 None:intergenic
CACTCAGACCAGGCTCAGTA+AGG 0.519638 5_4:+69040323 None:intergenic
TCAAAACCAGCCAACCTGTC+CGG 0.520672 5_4:-69037357 Msa0866960:three_prime_UTR
AACCCTTACTGCAACAAAGA+AGG 0.522582 5_4:-69037636 Msa0866960:three_prime_UTR
GCGATAATCAACACCATGAA+GGG 0.525263 5_4:+69039945 None:intergenic
CTCTTAGGTACCAAATAACA+TGG 0.525764 5_4:-69038008 Msa0866960:three_prime_UTR
TTAACTTACATTGACTCTGA+CGG 0.526827 5_4:-69041340 Msa0866960:CDS
TGGTCCTTTGTTGAAAGACC+TGG 0.527044 5_4:-69039455 Msa0866960:CDS
TGCACTTACCACAATACGAA+TGG 0.527828 5_4:+69040137 None:intergenic
GCGGTGGAAGACCTCCTGAT+TGG 0.529609 5_4:-69043317 Msa0866960:CDS
TTCATTGCTCGGTCAAAGCA+AGG 0.529827 5_4:-69040685 Msa0866960:CDS
TGACCGAGCAATGAAGAAGA+TGG 0.531357 5_4:+69040693 None:intergenic
TGTTGCCGGAAGAGATTCTC+CGG 0.532571 5_4:+69042226 None:intergenic
TTTCAACAAAGGACCAGCTA+CGG 0.533044 5_4:+69039462 None:intergenic
CTGAGAGAGATATTTGCTAC+TGG 0.533620 5_4:-69039757 Msa0866960:CDS
ACAGCTATTGAGGAAATGGC+AGG 0.534436 5_4:-69041828 Msa0866960:CDS
ACTGGCCGAAGGCTTGGAAT+GGG 0.534538 5_4:-69040729 Msa0866960:CDS
AGCGGTTGGTTTGAGTCATA+GGG 0.537863 5_4:+69044894 None:intergenic
TAATACTGACTTGTAGGTAG+AGG 0.538323 5_4:+69039516 None:intergenic
CTTTGCAAGAATTAAGGGAA+TGG 0.538856 5_4:-69039083 Msa0866960:CDS
TACGAATTTGAGTATATCAA+GGG 0.539623 5_4:+69039009 None:intergenic
TCAAGCAGACGAGCATCAGC+AGG 0.540988 5_4:+69042284 None:intergenic
AGAAGAGAGAGAAGCTCAGT+GGG 0.544555 5_4:-69038549 Msa0866960:CDS
ATGTTATCCTTCTTGCAGCA+AGG 0.545283 5_4:-69041701 Msa0866960:CDS
GGCGATAATCAACACCATGA+AGG 0.547314 5_4:+69039944 None:intergenic
TATGTGGAACCCTTTATCAT+GGG 0.547893 5_4:-69043382 Msa0866960:CDS
ACCAAACACTTGAAGCCTGT+TGG 0.547895 5_4:+69043458 None:intergenic
TACCTCTATTTGATCCTCCT+AGG 0.549204 5_4:-69040927 Msa0866960:CDS
TTCAACAAAGGACCAGCTAC+GGG 0.551987 5_4:+69039463 None:intergenic
ATTATCGCCATACTAAATGA+TGG 0.552243 5_4:-69039930 Msa0866960:intron
TCCTCTAGCTAGTGGCATTG+AGG 0.553716 5_4:+69038040 None:intergenic
AAAGGACCAGCTACGGGACC+TGG 0.558086 5_4:+69039469 None:intergenic
TACTGAGTGATGCAGAGTCA+TGG 0.558563 5_4:+69044797 None:intergenic
TTAATGTATCTGCTCAACAT+AGG 0.559131 5_4:+69037462 None:intergenic
ATCACAAGAGCTCTGAACCT+TGG 0.559361 5_4:-69040886 Msa0866960:CDS
TGAATTACACAGGCACGAGC+TGG 0.559826 5_4:-69041415 Msa0866960:intron
TGCCTAGGAGGATCAAATAG+AGG 0.560994 5_4:+69040925 None:intergenic
AAGAAGAGAGAGAAGCTCAG+TGG 0.561548 5_4:-69038550 Msa0866960:CDS
AACTCATGTGTTGCGAGGTG+CGG 0.561587 5_4:+69037729 None:intergenic
GAGTTGATTGAGAAGGCTGA+TGG 0.562854 5_4:-69040633 Msa0866960:CDS
TAATTATATACCCTTGTTTG+GGG 0.564115 5_4:+69043187 None:intergenic
CATCTCCACAACCAGACAGT+TGG 0.564636 5_4:-69039783 Msa0866960:CDS
TAGAAGCCCTTGCTGCAAGA+AGG 0.568196 5_4:+69041694 None:intergenic
GTTGACAGCACCAATCAAGT+TGG 0.569975 5_4:-69042092 Msa0866960:CDS
GGTAGAAACGGTAACCGGAC+AGG 0.570044 5_4:+69037343 None:intergenic
AGAAAGGGTGATGCAGCGGT+TGG 0.570636 5_4:+69044880 None:intergenic
ACGAATTTGAGTATATCAAG+GGG 0.572707 5_4:+69039010 None:intergenic
ATTGACAAGTTCGCCGAGCG+TGG 0.575480 5_4:-69041134 Msa0866960:CDS
CAAGAGAGGAAACATATATG+TGG 0.577053 5_4:-69040451 Msa0866960:CDS
CTAATAATGACACTCAGACC+AGG 0.578038 5_4:+69040313 None:intergenic
CAAAGAACGGAGTCCACGCT+CGG 0.579535 5_4:+69041121 None:intergenic
TCGTAAAGAAACTGCAAGAG+AGG 0.582235 5_4:-69040465 Msa0866960:CDS
TTGAACGACATTAGTAGTCA+AGG 0.583033 5_4:+69037883 None:intergenic
TACCATTATGACAATATCCA+AGG 0.583733 5_4:-69039818 Msa0866960:CDS
ATGGTAACAGACAAAACAGT+TGG 0.587258 5_4:+69041903 None:intergenic
TATTGAGGAAATGGCAGGGA+TGG 0.587411 5_4:-69041823 Msa0866960:CDS
GCGAGGTGCGGCCCAAATTG+TGG 0.587526 5_4:+69037741 None:intergenic
ACCAGAAAACACTTCATCTG+AGG 0.591597 5_4:+69042196 None:intergenic
AAGGTTCAGAGCTCTTGTGA+TGG 0.591709 5_4:+69040888 None:intergenic
AATACTGACTTGTAGGTAGA+GGG 0.591903 5_4:+69039517 None:intergenic
ATAGTATCTCCTCTAGCTAG+TGG 0.593212 5_4:+69038032 None:intergenic
CCAGAAAACACTTCATCTGA+GGG 0.594004 5_4:+69042197 None:intergenic
CAAGAATTAAGGGAATGGGA+TGG 0.596218 5_4:-69039078 Msa0866960:CDS
GTCTAGCAACACCCAAAGAA+CGG 0.599274 5_4:+69041108 None:intergenic
AATTTGAACACTGTCCAACA+TGG 0.599317 5_4:-69044731 Msa0866960:exon
AAGGCTGATACCTCCCATGT+TGG 0.606372 5_4:+69044717 None:intergenic
GTTTCAGCACTATCATGCCT+AGG 0.606943 5_4:+69040910 None:intergenic
TTAATGCTGATGATATCACC+TGG 0.609022 5_4:+69042323 None:intergenic
CAATGACAAGAATAGCTACA+GGG 0.610067 5_4:-69038471 Msa0866960:CDS
GAGAAAGATAAAGATAGCCC+TGG 0.613292 5_4:-69040976 Msa0866960:CDS
GTTTAGTCGTAACCAATGAG+AGG 0.614173 5_4:-69037495 Msa0866960:three_prime_UTR
GCCATTGCTTTGGCTAATGG+CGG 0.614878 5_4:-69043336 Msa0866960:CDS
GCACCCAATAGGAGAAGACC+AGG 0.615453 5_4:+69039437 None:intergenic
TCCTCAATGCCACTAGCTAG+AGG 0.617823 5_4:-69038041 Msa0866960:three_prime_UTR
GGGCTGCCATCATTTCATCA+GGG 0.619360 5_4:+69039537 None:intergenic
GATGCTACAGATGCCGCTAG+AGG 0.620087 5_4:-69040361 Msa0866960:CDS
GAACCTCTGCAACTGCAAAG+AGG 0.621118 5_4:-69041183 Msa0866960:CDS
CTCAGTGGGCAACTGCTCAG+AGG 0.621585 5_4:-69038535 Msa0866960:CDS
ACAGGCACGAGCTGGTGTCA+GGG 0.622880 5_4:-69041407 Msa0866960:intron
TCTGTGAGAACCAATAGCCA+TGG 0.624951 5_4:+69041884 None:intergenic
CATGGAACAATATAAATGCA+GGG 0.625295 5_4:+69044815 None:intergenic
TGATCAGCTTGCCATTGCCA+AGG 0.627353 5_4:-69040754 Msa0866960:CDS
AGTTGATGAGTTGATTGAGA+AGG 0.629685 5_4:-69040640 Msa0866960:CDS
ACCGCCATTAGCCAAAGCAA+TGG 0.633653 5_4:+69043335 None:intergenic
AGAGACGTGCTGAAGTTGCA+CGG 0.635563 5_4:-69038421 Msa0866960:intron
TCAGGAACGAATTCCAGTAG+AGG 0.639267 5_4:-69043535 Msa0866960:intron
AATATCAGAAGCACCTCTAG+CGG 0.640398 5_4:+69040348 None:intergenic
AACAGACCAACAAATTGCCA+TGG 0.640731 5_4:+69040949 None:intergenic
GAAACGGTAACCGGACAGGT+TGG 0.640892 5_4:+69037347 None:intergenic
AATTATATACCCTTGTTTGG+GGG 0.642686 5_4:+69043188 None:intergenic
TTGCCAAGGAAACTGGCCGA+AGG 0.646825 5_4:-69040740 Msa0866960:CDS
TCAGCACTATCATGCCTAGG+AGG 0.649052 5_4:+69040913 None:intergenic
ACAAAATCCTGCCAATCAGG+AGG 0.654781 5_4:+69043306 None:intergenic
CAGCTATTGAGGAAATGGCA+GGG 0.657394 5_4:-69041827 Msa0866960:CDS
ATATGTGGAATGACAGGTGA+TGG 0.659594 5_4:-69040436 Msa0866960:CDS
AAGACCAGGTCTTTCAACAA+AGG 0.660144 5_4:+69039451 None:intergenic
CATGGGAGGTATCAGCCTTG+AGG 0.660328 5_4:-69044713 Msa0866960:CDS
ATTTGAACACTGTCCAACAT+GGG 0.660570 5_4:-69044730 Msa0866960:exon
AAGATAGCCCTGGTGCACCA+TGG 0.661281 5_4:-69040966 Msa0866960:CDS
TCTCACAGACTTTCTCAACA+AGG 0.668351 5_4:-69041870 Msa0866960:CDS
CAAATTGCCATGGTGCACCA+GGG 0.668629 5_4:+69040959 None:intergenic
TGTTGTGCTAGGTAGCTACA+TGG 0.674726 5_4:-69039734 Msa0866960:CDS
GGCACGAGCTGGTGTCAGGG+AGG 0.679297 5_4:-69041404 Msa0866960:CDS
TGAACACTGTCCAACATGGG+AGG 0.680717 5_4:-69044727 Msa0866960:exon
GGCTGCAGCTGTTATCGCGG+TGG 0.681132 5_4:-69037667 Msa0866960:three_prime_UTR
CAATATCAAGGATTGTGATG+TGG 0.681168 5_4:-69037688 Msa0866960:three_prime_UTR
GACAACCTTCAAGAAGAACA+GGG 0.683350 5_4:-69038180 Msa0866960:three_prime_UTR
TAATGCTGATGATATCACCT+GGG 0.685163 5_4:+69042324 None:intergenic
TCATCTTAACATTCACACCA+AGG 0.685618 5_4:+69040869 None:intergenic
AATTGGCATAGATCTAGCAA+AGG 0.686470 5_4:-69041316 Msa0866960:CDS
GCAGGTTTAACATCAGACGA+AGG 0.690232 5_4:-69043483 Msa0866960:CDS
GTGAAGAAAGGGTGATGCAG+CGG 0.701551 5_4:+69044876 None:intergenic
TGTGGCTGCAGCTGTTATCG+CGG 0.705933 5_4:-69037670 Msa0866960:three_prime_UTR
CTACATGGCACTAATGACAG+TGG 0.707394 5_4:-69039719 Msa0866960:CDS
CGAATTTGAGTATATCAAGG+GGG 0.718068 5_4:+69039011 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTTAATGTAAAATTT+AGG + chr5_4:69037814-69037833 None:intergenic 10.0%
!! TTGTAAAAAAAATGTTTATA+TGG + chr5_4:69038135-69038154 None:intergenic 10.0%
!!! TATAATATTATATTTTAGCT+AGG + chr5_4:69038327-69038346 None:intergenic 10.0%
!!! AGAAATTATTTGAAATAAAA+TGG + chr5_4:69038644-69038663 None:intergenic 10.0%
!!! ATATTTTTCAATTTAATTGA+CGG + chr5_4:69039198-69039217 None:intergenic 10.0%
!! ATATTATCAATATTTCAAAA+CGG + chr5_4:69039734-69039753 None:intergenic 10.0%
!!! TTTTGAAATATTGATAATAT+GGG - chr5_4:69039734-69039753 Msa0866960:CDS 10.0%
!!! AATTTTTTTAATACCCAAAA+AGG - chr5_4:69037782-69037801 Msa0866960:three_prime_UTR 15.0%
!!! AGCTCTAATATAATATAATT+TGG + chr5_4:69038276-69038295 None:intergenic 15.0%
!! AAAATACTTATAACAAGATT+TGG + chr5_4:69038613-69038632 None:intergenic 15.0%
!!! ATGTTACAAAAGAAATATTT+TGG - chr5_4:69039346-69039365 Msa0866960:intron 15.0%
!! ATTAAAATCTAACAATTTCA+AGG + chr5_4:69039564-69039583 None:intergenic 15.0%
!!! GTTTTGAAATATTGATAATA+TGG - chr5_4:69039733-69039752 Msa0866960:CDS 15.0%
!!! ACTAATTGATATTTTTTTTC+TGG - chr5_4:69041047-69041066 Msa0866960:intron 15.0%
!!! AAAAGTTAACTTATTTTTGA+AGG - chr5_4:69042171-69042190 Msa0866960:intron 15.0%
!! AATAGTATAAATTAGAATCT+AGG - chr5_4:69043058-69043077 Msa0866960:intron 15.0%
!!! ATAATTTTTTCATGATTTAC+AGG - chr5_4:69043124-69043143 Msa0866960:intron 15.0%
!! AGAAAGATGTAATATAATTA+GGG + chr5_4:69043437-69043456 None:intergenic 15.0%
!! AAAAAAATGAAGTGAAGAAA+GGG + chr5_4:69037402-69037421 None:intergenic 20.0%
!! AAAAAAAATGAAGTGAAGAA+AGG + chr5_4:69037403-69037422 None:intergenic 20.0%
!! AATAGCAAAATATAGAAACA+GGG + chr5_4:69038029-69038048 None:intergenic 20.0%
!! AAATAGCAAAATATAGAAAC+AGG + chr5_4:69038030-69038049 None:intergenic 20.0%
!! ACATAACAATTCATTAAACA+AGG - chr5_4:69038171-69038190 Msa0866960:three_prime_UTR 20.0%
!!! TTTGAAATAAAATGGACAAA+GGG + chr5_4:69038636-69038655 None:intergenic 20.0%
!!! ATTTGAAATAAAATGGACAA+AGG + chr5_4:69038637-69038656 None:intergenic 20.0%
!!! ATAATTATATACCCTTGTTT+GGG + chr5_4:69039081-69039100 None:intergenic 20.0%
!! AATAATTATATACCCTTGTT+TGG + chr5_4:69039082-69039101 None:intergenic 20.0%
!! AGTCATTGAAATTATAAGAT+TGG - chr5_4:69039137-69039156 Msa0866960:intron 20.0%
!!! ATTTAATTTCAGATATATCC+TGG + chr5_4:69039168-69039187 None:intergenic 20.0%
!!! GTATGTTTTATTCATTTTGA+TGG - chr5_4:69039323-69039342 Msa0866960:intron 20.0%
!! TAATCAAATTTAGTATTTGC+AGG - chr5_4:69039580-69039599 Msa0866960:intron 20.0%
!! AATCAAATTTAGTATTTGCA+GGG - chr5_4:69039581-69039600 Msa0866960:intron 20.0%
!!! AATTAAAATTTTGCAATCCT+AGG - chr5_4:69039706-69039725 Msa0866960:CDS 20.0%
!!! ATTAAAATTTTGCAATCCTA+GGG - chr5_4:69039707-69039726 Msa0866960:CDS 20.0%
!! TAATGACTAAATATTCAAGT+TGG + chr5_4:69039794-69039813 None:intergenic 20.0%
!! TGAACATAATCATAATCATA+CGG + chr5_4:69041019-69041038 None:intergenic 20.0%
!! ATGAACCATTTATATAAGTA+TGG + chr5_4:69042220-69042239 None:intergenic 20.0%
!!! ATTTGAAGTAAACAATATGA+AGG + chr5_4:69042379-69042398 None:intergenic 20.0%
!!! TCTTAATTTTTTTTGCTACT+AGG + chr5_4:69042647-69042666 None:intergenic 20.0%
!!! ATTTATACTATTTCTTCCTA+AGG + chr5_4:69043050-69043069 None:intergenic 20.0%
!! GAGAAAGATGTAATATAATT+AGG + chr5_4:69043438-69043457 None:intergenic 20.0%
!! TTCATCATAGTATTTATTAC+AGG + chr5_4:69043466-69043485 None:intergenic 20.0%
!!! GATTTTTTAAATTTGTTCAC+AGG - chr5_4:69043957-69043976 Msa0866960:intron 20.0%
!!! TAATCATGTGTTTTTAGATT+AGG - chr5_4:69044165-69044184 Msa0866960:intron 20.0%
!!! TTTTCAAAATCACAATATCA+AGG - chr5_4:69044564-69044583 Msa0866960:intron 20.0%
!! AACATTATCTGGTATATATT+AGG - chr5_4:69044823-69044842 Msa0866960:five_prime_UTR 20.0%
! AGTAGTAACAGTAACTTAAA+AGG + chr5_4:69037938-69037957 None:intergenic 25.0%
!!! AATTTTTCATTGAAAGCACT+GGG + chr5_4:69038229-69038248 None:intergenic 25.0%
!!! TAATTTTTCATTGAAAGCAC+TGG + chr5_4:69038230-69038249 None:intergenic 25.0%
! ATAATTTGGACCAAACTAAT+AGG + chr5_4:69038262-69038281 None:intergenic 25.0%
! AAACAAATTGGAAGAGAAAA+GGG - chr5_4:69038831-69038850 Msa0866960:intron 25.0%
!!! AGCAAATTTTTGAAGTTCTT+AGG - chr5_4:69038856-69038875 Msa0866960:intron 25.0%
!! TAATTATATACCCTTGTTTG+GGG + chr5_4:69039080-69039099 None:intergenic 25.0%
!! ATTATAAGATTGGTTAATCC+AGG - chr5_4:69039147-69039166 Msa0866960:intron 25.0%
!!! TTTTGTTTGCAATCATTGTT+TGG - chr5_4:69039458-69039477 Msa0866960:CDS 25.0%
! TAACAATTTCAAGGATCATT+TGG + chr5_4:69039555-69039574 None:intergenic 25.0%
! TGATAATAGATTTAGACAGA+AGG - chr5_4:69039675-69039694 Msa0866960:intron 25.0%
!! TTAAAATTTTGCAATCCTAG+GGG - chr5_4:69039708-69039727 Msa0866960:CDS 25.0%
! GATATCATCAGCATTAAATT+AGG - chr5_4:69039947-69039966 Msa0866960:CDS 25.0%
!!! AATCTTTTGGTTCTATTGAT+TGG - chr5_4:69040319-69040338 Msa0866960:CDS 25.0%
!! TGTTGATAAAAACTTGATTG+AGG - chr5_4:69040513-69040532 Msa0866960:intron 25.0%
!! TCTTTCTGATACTGAATTTT+AGG - chr5_4:69040789-69040808 Msa0866960:intron 25.0%
!! AGTTTTACTTTGAATTACAC+AGG - chr5_4:69040839-69040858 Msa0866960:intron 25.0%
!!! TTGAATGGTTTGTTTATAAC+AGG - chr5_4:69041257-69041276 Msa0866960:intron 25.0%
!!! TTTTTTCTCTTTCTATGACA+TGG - chr5_4:69041758-69041777 Msa0866960:intron 25.0%
! GCAATTAAATCAAGTAAGTT+TGG + chr5_4:69042034-69042053 None:intergenic 25.0%
! CTTGTCCATACTTATATAAA+TGG - chr5_4:69042212-69042231 Msa0866960:CDS 25.0%
!!! TATTCTTCATTTTTCCAGTT+TGG - chr5_4:69042256-69042275 Msa0866960:CDS 25.0%
! AATTATTACCGAGAAGAAAT+CGG + chr5_4:69042595-69042614 None:intergenic 25.0%
!!! ATTTTTTCATGATTTACAGG+TGG - chr5_4:69043127-69043146 Msa0866960:intron 25.0%
! TTATAGCAGTATATGCTAAT+TGG - chr5_4:69043156-69043175 Msa0866960:intron 25.0%
! TACGAATTTGAGTATATCAA+GGG + chr5_4:69043258-69043277 None:intergenic 25.0%
! TTACGAATTTGAGTATATCA+AGG + chr5_4:69043259-69043278 None:intergenic 25.0%
! TGCAGTTGAAAATTTGAAAA+AGG + chr5_4:69043389-69043408 None:intergenic 25.0%
! GTTGACTAAATTAAGAAAGT+TGG + chr5_4:69043564-69043583 None:intergenic 25.0%
!! ATTTTGAATCTTGAAATCTC+TGG + chr5_4:69043639-69043658 None:intergenic 25.0%
! TAAAAAATCTCTTAGACACT+AGG + chr5_4:69043946-69043965 None:intergenic 25.0%
! ATTATACTGTTTAAGAAGCT+TGG - chr5_4:69044062-69044081 Msa0866960:intron 25.0%
!!! TGTTTTTAGATTAGGTTGAA+GGG - chr5_4:69044173-69044192 Msa0866960:intron 25.0%
!! TCCTTTTGTGAAAAATTGAA+TGG - chr5_4:69044196-69044215 Msa0866960:intron 25.0%
!! ACCATTCAATTTTTCACAAA+AGG + chr5_4:69044200-69044219 None:intergenic 25.0%
!!! ATTTACTTGCGTCTTATTTT+TGG - chr5_4:69044287-69044306 Msa0866960:intron 25.0%
!!! GCAATCAGAGTTTTAAATAA+AGG - chr5_4:69044493-69044512 Msa0866960:intron 25.0%
CATGGAACAATATAAATGCA+GGG + chr5_4:69037452-69037471 None:intergenic 30.0%
TCATGGAACAATATAAATGC+AGG + chr5_4:69037453-69037472 None:intergenic 30.0%
TAGCATGTTCATCATTCAAA+TGG + chr5_4:69037750-69037769 None:intergenic 30.0%
! ATTTAGGTACACTCCTTTTT+GGG + chr5_4:69037798-69037817 None:intergenic 30.0%
! AATTTAGGTACACTCCTTTT+TGG + chr5_4:69037799-69037818 None:intergenic 30.0%
TGTTTAATGACACACAACTT+AGG + chr5_4:69038435-69038454 None:intergenic 30.0%
!!! TTGAAACAACGTTGTTTTTC+AGG - chr5_4:69038711-69038730 Msa0866960:intron 30.0%
!! CTTTTCTCTTCCAATTTGTT+TGG + chr5_4:69038832-69038851 None:intergenic 30.0%
CAAACAAATTGGAAGAGAAA+AGG - chr5_4:69038830-69038849 Msa0866960:intron 30.0%
TGAAGTTCTTAGGATTTATG+TGG - chr5_4:69038866-69038885 Msa0866960:intron 30.0%
! TGTTGGTATCATTTCTCTTT+TGG - chr5_4:69038978-69038997 Msa0866960:intron 30.0%
TTCATTGAAGAGAATAATGC+TGG - chr5_4:69039021-69039040 Msa0866960:CDS 30.0%
! AATTATATACCCTTGTTTGG+GGG + chr5_4:69039079-69039098 None:intergenic 30.0%
! ATTTTGCACCACAATTTTGA+AGG - chr5_4:69039253-69039272 Msa0866960:intron 30.0%
GCATATAACCTTCAAAATTG+TGG + chr5_4:69039264-69039283 None:intergenic 30.0%
!!! AAGGTTATATGCTTGTTTTG+AGG - chr5_4:69039272-69039291 Msa0866960:intron 30.0%
!!! GAAATATTTTGGTGAAGTGA+AGG - chr5_4:69039357-69039376 Msa0866960:intron 30.0%
AAGTGAAGGACTTAATTGAT+TGG - chr5_4:69039371-69039390 Msa0866960:intron 30.0%
AATCAAAGTGAATAGTGCTA+GGG - chr5_4:69039645-69039664 Msa0866960:intron 30.0%
AGTTGGTCATTGAAATTGTA+GGG + chr5_4:69039777-69039796 None:intergenic 30.0%
! AAGTTGGTCATTGAAATTGT+AGG + chr5_4:69039778-69039797 None:intergenic 30.0%
TTTCTTGCTACAAAACATGT+AGG - chr5_4:69039871-69039890 Msa0866960:intron 30.0%
! AGAAATTACCAATTGCTGTT+AGG + chr5_4:69040213-69040232 None:intergenic 30.0%
! CTTATTTAAAGTCAGAGTTC+CGG + chr5_4:69040488-69040507 None:intergenic 30.0%
! TTGATTGAGGTTTTTGCTAA+GGG - chr5_4:69040526-69040545 Msa0866960:intron 30.0%
GCATATTTATTTACCTCCTT+TGG + chr5_4:69040649-69040668 None:intergenic 30.0%
!! TTAACTTACATTGACTCTGA+CGG - chr5_4:69040924-69040943 Msa0866960:CDS 30.0%
!!! ACTATTTGTTTTGTTAGCAG+TGG - chr5_4:69040988-69041007 Msa0866960:CDS 30.0%
ACATAATCATAATCATACGG+TGG + chr5_4:69041016-69041035 None:intergenic 30.0%
CAATAGCATCAACAAAAGAA+GGG + chr5_4:69041240-69041259 None:intergenic 30.0%
TCAATAGCATCAACAAAAGA+AGG + chr5_4:69041241-69041260 None:intergenic 30.0%
! CTTTTGTTGATGCTATTGAA+TGG - chr5_4:69041242-69041261 Msa0866960:intron 30.0%
GTGAATGTTAAGATGATTAC+TGG - chr5_4:69041402-69041421 Msa0866960:CDS 30.0%
ATGATTACTGGTAAGATTTG+AGG - chr5_4:69041414-69041433 Msa0866960:intron 30.0%
AAACATATATGTGGAATGAC+AGG - chr5_4:69041822-69041841 Msa0866960:CDS 30.0%
GTGTTAGAATGCTAAAGATT+TGG + chr5_4:69042069-69042088 None:intergenic 30.0%
ATTGTGGTAAGTGCAAAAAT+AGG - chr5_4:69042135-69042154 Msa0866960:CDS 30.0%
AAAATCAAACTTCCAGATCA+AGG + chr5_4:69042296-69042315 None:intergenic 30.0%
TACCATTATGACAATATCCA+AGG - chr5_4:69042446-69042465 Msa0866960:intron 30.0%
ATCCTTGGATATTGTCATAA+TGG + chr5_4:69042451-69042470 None:intergenic 30.0%
!!! TCATTTCATCAGGGTTTTTT+CGG + chr5_4:69042721-69042740 None:intergenic 30.0%
AAAAAACCCTGATGAAATGA+TGG - chr5_4:69042721-69042740 Msa0866960:intron 30.0%
!! GACTTATAATACTGACTTGT+AGG + chr5_4:69042757-69042776 None:intergenic 30.0%
ACAAGTCAGTATTATAAGTC+AGG - chr5_4:69042757-69042776 Msa0866960:intron 30.0%
TGTATGATCATCAAGAATGA+GGG + chr5_4:69042933-69042952 None:intergenic 30.0%
!! GCAGTGTACATTTTATTTAG+CGG + chr5_4:69042984-69043003 None:intergenic 30.0%
TTTGCAAGAATTAAGGGAAT+GGG - chr5_4:69043182-69043201 Msa0866960:intron 30.0%
ACGAATTTGAGTATATCAAG+GGG + chr5_4:69043257-69043276 None:intergenic 30.0%
TTTGAAAAAGGTTCTCAAGA+GGG + chr5_4:69043377-69043396 None:intergenic 30.0%
ATTTGAAAAAGGTTCTCAAG+AGG + chr5_4:69043378-69043397 None:intergenic 30.0%
! GTTTTACAAGTGTACTTTTC+AGG + chr5_4:69043509-69043528 None:intergenic 30.0%
! AGTAATATAATGCTGCTTCT+AGG + chr5_4:69043592-69043611 None:intergenic 30.0%
TTCACAACAAAGAAAGACTA+TGG - chr5_4:69043689-69043708 Msa0866960:intron 30.0%
ATTCTTGTCATTGAAAAGGT+TGG + chr5_4:69043786-69043805 None:intergenic 30.0%
AGCTATTCTTGTCATTGAAA+AGG + chr5_4:69043790-69043809 None:intergenic 30.0%
! TTAAATTTGTTCACAGGCTT+AGG - chr5_4:69043963-69043982 Msa0866960:intron 30.0%
! TAAATTTGTTCACAGGCTTA+GGG - chr5_4:69043964-69043983 Msa0866960:intron 30.0%
!!! CATTTGTTGTTTTTGCTTCT+TGG + chr5_4:69044126-69044145 None:intergenic 30.0%
!!! GTGTTTTTAGATTAGGTTGA+AGG - chr5_4:69044172-69044191 Msa0866960:intron 30.0%
TACCAAATAACATGGTTGAT+AGG - chr5_4:69044264-69044283 Msa0866960:intron 30.0%
ATCCTATCAACCATGTTATT+TGG + chr5_4:69044269-69044288 None:intergenic 30.0%
TTAATGTATCTGCTCAACAT+AGG + chr5_4:69044805-69044824 None:intergenic 30.0%
GCAGATACATTAACATTATC+TGG - chr5_4:69044812-69044831 Msa0866960:five_prime_UTR 30.0%
CTATTAAGACTCTGTGTGTT+TGG - chr5_4:69037509-69037528 Msa0866960:three_prime_UTR 35.0%
AATTTGAACACTGTCCAACA+TGG - chr5_4:69037533-69037552 Msa0866960:three_prime_UTR 35.0%
ATTTGAACACTGTCCAACAT+GGG - chr5_4:69037534-69037553 Msa0866960:three_prime_UTR 35.0%
!!! TCTCGTTTTTTATCTCCTCA+AGG + chr5_4:69037569-69037588 None:intergenic 35.0%
AAAAAACGAGAACGTTGATC+TGG - chr5_4:69037578-69037597 Msa0866960:three_prime_UTR 35.0%
! CTGTGTTTACATTTTCTGCA+TGG - chr5_4:69037640-69037659 Msa0866960:three_prime_UTR 35.0%
TTCACAGCACTTTGTGATAT+AGG - chr5_4:69037866-69037885 Msa0866960:three_prime_UTR 35.0%
AGCACTTTGTGATATAGGAA+GGG - chr5_4:69037871-69037890 Msa0866960:three_prime_UTR 35.0%
TGAATTACAAGTGCCTAAAG+AGG + chr5_4:69037995-69038014 None:intergenic 35.0%
ATGACACACAACTTAGGTTT+AGG + chr5_4:69038429-69038448 None:intergenic 35.0%
AGTGTTTGGTCCAAACAAAT+TGG - chr5_4:69038819-69038838 Msa0866960:intron 35.0%
TTATGTGGAACCCTTTATCA+TGG - chr5_4:69038881-69038900 Msa0866960:intron 35.0%
TATGTGGAACCCTTTATCAT+GGG - chr5_4:69038882-69038901 Msa0866960:intron 35.0%
CTTCCATAACCCATGATAAA+GGG + chr5_4:69038894-69038913 None:intergenic 35.0%
!!! GTTATATGCTTGTTTTGAGG+CGG - chr5_4:69039275-69039294 Msa0866960:intron 35.0%
TGGAGAGTAAATACGCAAAT+TGG - chr5_4:69039478-69039497 Msa0866960:CDS 35.0%
GAATCAAAGTGAATAGTGCT+AGG - chr5_4:69039644-69039663 Msa0866960:intron 35.0%
!! AACATGTAGGTTCTAAGAGA+TGG - chr5_4:69039884-69039903 Msa0866960:intron 35.0%
! TGAAGAAGATGCTGCAATTT+TGG - chr5_4:69039916-69039935 Msa0866960:intron 35.0%
TAATGCTGATGATATCACCT+GGG + chr5_4:69039943-69039962 None:intergenic 35.0%
TTAATGCTGATGATATCACC+TGG + chr5_4:69039944-69039963 None:intergenic 35.0%
! TCTGGTTCAACTGTTAAGAA+AGG - chr5_4:69040085-69040104 Msa0866960:intron 35.0%
! TTTTGGTAAAGCTGCTCATT+TGG - chr5_4:69040150-69040169 Msa0866960:CDS 35.0%
! AGACGGAATTGACAATCTTT+TGG - chr5_4:69040306-69040325 Msa0866960:CDS 35.0%
!!! CTTTTGGTTCTATTGATTGG+AGG - chr5_4:69040322-69040341 Msa0866960:CDS 35.0%
AAAACAGTTGGCATAGCAAT+TGG + chr5_4:69040352-69040371 None:intergenic 35.0%
ATGGTAACAGACAAAACAGT+TGG + chr5_4:69040364-69040383 None:intergenic 35.0%
! AACTGTTTTGTCTGTTACCA+TGG - chr5_4:69040363-69040382 Msa0866960:CDS 35.0%
AAAGAGAATGACAGCTATTG+AGG - chr5_4:69040426-69040445 Msa0866960:CDS 35.0%
AATGACAGCTATTGAGGAAA+TGG - chr5_4:69040432-69040451 Msa0866960:CDS 35.0%
! CTTGATTGAGGTTTTTGCTA+AGG - chr5_4:69040525-69040544 Msa0866960:intron 35.0%
ACCAGAAAGATGTAGCATTT+AGG + chr5_4:69040671-69040690 None:intergenic 35.0%
!!! CTGGTAACTTTTTTGTCAGT+AGG - chr5_4:69040686-69040705 Msa0866960:CDS 35.0%
AGGAATCAAACTCAATACCT+CGG - chr5_4:69040706-69040725 Msa0866960:CDS 35.0%
TATCAGAAAGATAGACCACT+GGG + chr5_4:69040780-69040799 None:intergenic 35.0%
TCTTGTCTACAGGATTGAAT+GGG + chr5_4:69040896-69040915 None:intergenic 35.0%
AATTGGCATAGATCTAGCAA+AGG - chr5_4:69040948-69040967 Msa0866960:CDS 35.0%
AACAAATAGTTTACCTGCTC+AGG + chr5_4:69040978-69040997 None:intergenic 35.0%
TCATCTTAACATTCACACCA+AGG + chr5_4:69041398-69041417 None:intergenic 35.0%
ATCATGCAGCTTAAACATTG+TGG - chr5_4:69041469-69041488 Msa0866960:intron 35.0%
! TGTGGATTTTCTCATTCTCT+AGG - chr5_4:69041487-69041506 Msa0866960:intron 35.0%
TATCCATCTTCTTCATTGCT+CGG - chr5_4:69041568-69041587 Msa0866960:intron 35.0%
TTCTCAATCAACTCATCAAC+TGG + chr5_4:69041625-69041644 None:intergenic 35.0%
!! AGTTGATGAGTTGATTGAGA+AGG - chr5_4:69041624-69041643 Msa0866960:intron 35.0%
CATAACCATCATTGTTGTGA+AGG + chr5_4:69041683-69041702 None:intergenic 35.0%
CAAGAGAGGAAACATATATG+TGG - chr5_4:69041813-69041832 Msa0866960:CDS 35.0%
CAGTATAGTTCTTCATCCTT+TGG + chr5_4:69042004-69042023 None:intergenic 35.0%
GTCAATTACCATTCGTATTG+TGG - chr5_4:69042119-69042138 Msa0866960:CDS 35.0%
CAATGAACATGAAACCAAAC+TGG + chr5_4:69042273-69042292 None:intergenic 35.0%
ATAATGGTACCTAGTAACAG+GGG + chr5_4:69042435-69042454 None:intergenic 35.0%
CATAATGGTACCTAGTAACA+GGG + chr5_4:69042436-69042455 None:intergenic 35.0%
TCATAATGGTACCTAGTAAC+AGG + chr5_4:69042437-69042456 None:intergenic 35.0%
! TAATGACAGTGGTGTTTTTC+TGG - chr5_4:69042556-69042575 Msa0866960:intron 35.0%
CTACTAGGAGATACTATTGA+GGG + chr5_4:69042632-69042651 None:intergenic 35.0%
AACACGACTTCTATTATTGC+AGG - chr5_4:69042673-69042692 Msa0866960:intron 35.0%
CTATTATTGCAGGACAAGTT+TGG - chr5_4:69042683-69042702 Msa0866960:intron 35.0%
!! AATACTGACTTGTAGGTAGA+GGG + chr5_4:69042750-69042769 None:intergenic 35.0%
!! TAATACTGACTTGTAGGTAG+AGG + chr5_4:69042751-69042770 None:intergenic 35.0%
!! CAATCATAAAAGCACCCAAT+AGG + chr5_4:69042841-69042860 None:intergenic 35.0%
GTGTATGATCATCAAGAATG+AGG + chr5_4:69042934-69042953 None:intergenic 35.0%
!! GTGTACATTTTATTTAGCGG+TGG + chr5_4:69042981-69043000 None:intergenic 35.0%
AATTGTGTTACCAGCTGATA+AGG + chr5_4:69043089-69043108 None:intergenic 35.0%
TTGGAGCTTTGCAAGAATTA+AGG - chr5_4:69043175-69043194 Msa0866960:intron 35.0%
TGGAGCTTTGCAAGAATTAA+GGG - chr5_4:69043176-69043195 Msa0866960:intron 35.0%
CTTTGCAAGAATTAAGGGAA+TGG - chr5_4:69043181-69043200 Msa0866960:intron 35.0%
AAGAATTAAGGGAATGGGAT+GGG - chr5_4:69043187-69043206 Msa0866960:intron 35.0%
CGAATTTGAGTATATCAAGG+GGG + chr5_4:69043256-69043275 None:intergenic 35.0%
! GAGGGTCTTGTATTAAGATA+CGG + chr5_4:69043359-69043378 None:intergenic 35.0%
TCAATGACAAGAATAGCTAC+AGG - chr5_4:69043792-69043811 Msa0866960:intron 35.0%
CAATGACAAGAATAGCTACA+GGG - chr5_4:69043793-69043812 Msa0866960:intron 35.0%
AGCAAAAACAACAAATGCAG+TGG - chr5_4:69044129-69044148 Msa0866960:intron 35.0%
AGAGGAGATACTATTCTCTT+AGG - chr5_4:69044241-69044260 Msa0866960:intron 35.0%
CTCTTAGGTACCAAATAACA+TGG - chr5_4:69044256-69044275 Msa0866960:intron 35.0%
TTGAACGACATTAGTAGTCA+AGG + chr5_4:69044384-69044403 None:intergenic 35.0%
TCTAGCCTAAAAACAGTGAA+AGG - chr5_4:69044448-69044467 Msa0866960:intron 35.0%
CTAGCCTAAAAACAGTGAAA+GGG - chr5_4:69044449-69044468 Msa0866960:intron 35.0%
ATAAAAACTCATGTGTTGCG+AGG + chr5_4:69044543-69044562 None:intergenic 35.0%
CAATATCAAGGATTGTGATG+TGG - chr5_4:69044576-69044595 Msa0866960:intron 35.0%
TTCCTTCTTTGTTGCAGTAA+GGG + chr5_4:69044633-69044652 None:intergenic 35.0%
TTTCCTTCTTTGTTGCAGTA+AGG + chr5_4:69044634-69044653 None:intergenic 35.0%
!! TGCATCTCACTTTTGTTTCT+TGG - chr5_4:69044747-69044766 Msa0866960:five_prime_UTR 35.0%
!! GGATTGATTTTTCCTCTCAT+TGG + chr5_4:69044784-69044803 None:intergenic 35.0%
CAGCACTTTGTGATATAGGA+AGG - chr5_4:69037870-69037889 Msa0866960:three_prime_UTR 40.0%
TGCATTCACCAATCCTCTTT+AGG - chr5_4:69037979-69037998 Msa0866960:three_prime_UTR 40.0%
TACAAGTGCCTAAAGAGGAT+TGG + chr5_4:69037990-69038009 None:intergenic 40.0%
AGCCAGTTCACCTATTAGTT+TGG - chr5_4:69038249-69038268 Msa0866960:CDS 40.0%
GACCAAACTAATAGGTGAAC+TGG + chr5_4:69038254-69038273 None:intergenic 40.0%
! GAACCCTTTATCATGGGTTA+TGG - chr5_4:69038888-69038907 Msa0866960:intron 40.0%
GCTTCCATAACCCATGATAA+AGG + chr5_4:69038895-69038914 None:intergenic 40.0%
TATGGAAGCTGCTGCTATTA+TGG - chr5_4:69038906-69038925 Msa0866960:intron 40.0%
TGCTATTATGGCCATTGCTT+TGG - chr5_4:69038918-69038937 Msa0866960:intron 40.0%
AATATTTCAAAACGGCCCCT+AGG + chr5_4:69039726-69039745 None:intergenic 40.0%
!! TGTAGGTTCTAAGAGATGGT+AGG - chr5_4:69039888-69039907 Msa0866960:intron 40.0%
GTTGATCAGTCTGCTTTAAC+CGG - chr5_4:69040019-69040038 Msa0866960:intron 40.0%
TTTAACCGGAGAATCTCTTC+CGG - chr5_4:69040033-69040052 Msa0866960:intron 40.0%
CCAGAAAACACTTCATCTGA+GGG + chr5_4:69040070-69040089 None:intergenic 40.0%
ACCAGAAAACACTTCATCTG+AGG + chr5_4:69040071-69040090 None:intergenic 40.0%
!!! ACTGGAGTGCACACATTTTT+TGG - chr5_4:69040133-69040152 Msa0866960:intron 40.0%
CTGAAAGTGACCAACTTGAT+TGG + chr5_4:69040185-69040204 None:intergenic 40.0%
CAGAAAGTCCTAACAGCAAT+TGG - chr5_4:69040202-69040221 Msa0866960:intron 40.0%
TGCATTTGCTCAATTGCTGT+TGG - chr5_4:69040232-69040251 Msa0866960:intron 40.0%
!! CTATACTTGCGGTGTTGTAT+CGG + chr5_4:69040286-69040305 None:intergenic 40.0%
CAATTCCGTCTCTATACTTG+CGG + chr5_4:69040297-69040316 None:intergenic 40.0%
TTGTCTGTTACCATGGCTAT+TGG - chr5_4:69040370-69040389 Msa0866960:CDS 40.0%
TCTCACAGACTTTCTCAACA+AGG - chr5_4:69040394-69040413 Msa0866960:CDS 40.0%
!! TTTTGCTAAGGGTGTAGAGA+AGG - chr5_4:69040537-69040556 Msa0866960:intron 40.0%
ATGTTATCCTTCTTGCAGCA+AGG - chr5_4:69040563-69040582 Msa0866960:intron 40.0%
TGTTATCCTTCTTGCAGCAA+GGG - chr5_4:69040564-69040583 Msa0866960:intron 40.0%
GCCTAAATGCTACATCTTTC+TGG - chr5_4:69040667-69040686 Msa0866960:CDS 40.0%
GGAATCAAACTCAATACCTC+GGG - chr5_4:69040707-69040726 Msa0866960:CDS 40.0%
GAATCAAACTCAATACCTCG+GGG - chr5_4:69040708-69040727 Msa0866960:CDS 40.0%
ATCAGAAAGATAGACCACTG+GGG + chr5_4:69040779-69040798 None:intergenic 40.0%
GTATCAGAAAGATAGACCAC+TGG + chr5_4:69040781-69040800 None:intergenic 40.0%
CTCTTGTCTACAGGATTGAA+TGG + chr5_4:69040897-69040916 None:intergenic 40.0%
AAAGCAGTTCTCTTGTCTAC+AGG + chr5_4:69040906-69040925 None:intergenic 40.0%
!! ACATTGACTCTGACGGAAAT+TGG - chr5_4:69040931-69040950 Msa0866960:CDS 40.0%
GGGCTATCTTTATCTTTCTC+AGG + chr5_4:69041288-69041307 None:intergenic 40.0%
GAGAAAGATAAAGATAGCCC+TGG - chr5_4:69041288-69041307 Msa0866960:intron 40.0%
AACAGACCAACAAATTGCCA+TGG + chr5_4:69041318-69041337 None:intergenic 40.0%
TACCTCTATTTGATCCTCCT+AGG - chr5_4:69041337-69041356 Msa0866960:CDS 40.0%
TAGGTCCTTCACAACAATGA+TGG - chr5_4:69041675-69041694 Msa0866960:CDS 40.0%
TCGTAAAGAAACTGCAAGAG+AGG - chr5_4:69041799-69041818 Msa0866960:CDS 40.0%
ATATGTGGAATGACAGGTGA+TGG - chr5_4:69041828-69041847 Msa0866960:CDS 40.0%
ATATCTGCTCTCTTTAACGC+AGG + chr5_4:69041867-69041886 None:intergenic 40.0%
GCGTTAAAGAGAGCAGATAT+TGG - chr5_4:69041867-69041886 Msa0866960:CDS 40.0%
!! AATATCAGAAGCACCTCTAG+CGG + chr5_4:69041919-69041938 None:intergenic 40.0%
CTAATAATGACACTCAGACC+AGG + chr5_4:69041954-69041973 None:intergenic 40.0%
! CAAGCAGAGCAATTTTCCAA+AGG - chr5_4:69041985-69042004 Msa0866960:intron 40.0%
TGCACTTACCACAATACGAA+TGG + chr5_4:69042130-69042149 None:intergenic 40.0%
TCATGTTCATTGCCTTGATC+TGG - chr5_4:69042281-69042300 Msa0866960:CDS 40.0%
!! GTTTGATTTTGCACCCTTCA+TGG - chr5_4:69042306-69042325 Msa0866960:CDS 40.0%
GCGATAATCAACACCATGAA+GGG + chr5_4:69042322-69042341 None:intergenic 40.0%
AGATGGTTTCACTCTATCCT+TGG + chr5_4:69042466-69042485 None:intergenic 40.0%
! CTGAGAGAGATATTTGCTAC+TGG - chr5_4:69042507-69042526 Msa0866960:intron 40.0%
!! GAAGGATACCGATTTCTTCT+CGG - chr5_4:69042584-69042603 Msa0866960:intron 40.0%
GCTACTAGGAGATACTATTG+AGG + chr5_4:69042633-69042652 None:intergenic 40.0%
! AGGCACTAATTTTTGTCACC+AGG - chr5_4:69042777-69042796 Msa0866960:intron 40.0%
TTTCAACAAAGGACCAGCTA+CGG + chr5_4:69042805-69042824 None:intergenic 40.0%
AAGACCAGGTCTTTCAACAA+AGG + chr5_4:69042816-69042835 None:intergenic 40.0%
! TGCTTTTATGATTGCTCAGC+TGG - chr5_4:69042847-69042866 Msa0866960:intron 40.0%
!! ATTTTATTTAGCGGTGGTCG+TGG + chr5_4:69042975-69042994 None:intergenic 40.0%
AGTTACACTTCTGTTGCCTT+AGG - chr5_4:69043031-69043050 Msa0866960:intron 40.0%
CAAGAATTAAGGGAATGGGA+TGG - chr5_4:69043186-69043205 Msa0866960:intron 40.0%
AGAATTAAGGGAATGGGATG+GGG - chr5_4:69043188-69043207 Msa0866960:intron 40.0%
! GTAATCCGCTATGTTCTAAG+TGG - chr5_4:69043275-69043294 Msa0866960:CDS 40.0%
! CTTTGCCACTTAGAACATAG+CGG + chr5_4:69043283-69043302 None:intergenic 40.0%
! ATGTTCTAAGTGGCAAAGCT+TGG - chr5_4:69043285-69043304 Msa0866960:CDS 40.0%
! TGTTCTAAGTGGCAAAGCTT+GGG - chr5_4:69043286-69043305 Msa0866960:CDS 40.0%
CAAAGCTTGGGATAATCTTC+TGG - chr5_4:69043298-69043317 Msa0866960:CDS 40.0%
! GGATAATCTTCTGGAGAACA+AGG - chr5_4:69043307-69043326 Msa0866960:CDS 40.0%
! GGTCTTGTATTAAGATACGG+AGG + chr5_4:69043356-69043375 None:intergenic 40.0%
!! ATAATGCTGCTTCTAGGACT+CGG + chr5_4:69043586-69043605 None:intergenic 40.0%
! TTGAAAAGGTTGGTTGTGTC+AGG + chr5_4:69043776-69043795 None:intergenic 40.0%
GAATCAGTCGTGAAGCTTAA+GGG - chr5_4:69044013-69044032 Msa0866960:intron 40.0%
GACAACCTTCAAGAAGAACA+GGG - chr5_4:69044084-69044103 Msa0866960:intron 40.0%
ATAGTATCTCCTCTAGCTAG+TGG + chr5_4:69044235-69044254 None:intergenic 40.0%
GCTAGACATGAAGTCAGAAA+AGG + chr5_4:69044434-69044453 None:intergenic 40.0%
!! CTCACCCTTTCACTGTTTTT+AGG + chr5_4:69044456-69044475 None:intergenic 40.0%
AACCCTTACTGCAACAAAGA+AGG - chr5_4:69044628-69044647 Msa0866960:intron 40.0%
GTTTAGTCGTAACCAATGAG+AGG - chr5_4:69044769-69044788 Msa0866960:five_prime_UTR 40.0%
!! AGCGGTTGGTTTGAGTCATA+GGG + chr5_4:69037373-69037392 None:intergenic 45.0%
TACTGAGTGATGCAGAGTCA+TGG + chr5_4:69037470-69037489 None:intergenic 45.0%
TTTGTGATATAGGAAGGGCG+TGG - chr5_4:69037876-69037895 Msa0866960:three_prime_UTR 45.0%
TCAGGAACGAATTCCAGTAG+AGG - chr5_4:69038729-69038748 Msa0866960:intron 45.0%
CAGCTGAAATGTTCAAGAGC+AGG - chr5_4:69038763-69038782 Msa0866960:intron 45.0%
GCAGGTTTAACATCAGACGA+AGG - chr5_4:69038781-69038800 Msa0866960:intron 45.0%
ACCAAACACTTGAAGCCTGT+TGG + chr5_4:69038809-69038828 None:intergenic 45.0%
ATGGCCATTGCTTTGGCTAA+TGG - chr5_4:69038925-69038944 Msa0866960:intron 45.0%
ACAAAATCCTGCCAATCAGG+AGG + chr5_4:69038961-69038980 None:intergenic 45.0%
CCAACAAAATCCTGCCAATC+AGG + chr5_4:69038964-69038983 None:intergenic 45.0%
! CCTGATTGGCAGGATTTTGT+TGG - chr5_4:69038961-69038980 Msa0866960:intron 45.0%
!! AGGTTCTAAGAGATGGTAGG+TGG - chr5_4:69039891-69039910 Msa0866960:intron 45.0%
TCTGAGGGATTCTTTGTTGC+CGG + chr5_4:69040055-69040074 None:intergenic 45.0%
!! CCCTCAGATGAAGTGTTTTC+TGG - chr5_4:69040067-69040086 Msa0866960:intron 45.0%
GAAGCAGTTGTCATTGCTAC+TGG - chr5_4:69040115-69040134 Msa0866960:intron 45.0%
GTTGACAGCACCAATCAAGT+TGG - chr5_4:69040172-69040191 Msa0866960:intron 45.0%
CAACACCGCAAGTATAGAGA+CGG - chr5_4:69040289-69040308 Msa0866960:CDS 45.0%
TCTGTGAGAACCAATAGCCA+TGG + chr5_4:69040383-69040402 None:intergenic 45.0%
ACAGCTATTGAGGAAATGGC+AGG - chr5_4:69040436-69040455 Msa0866960:CDS 45.0%
CAGCTATTGAGGAAATGGCA+GGG - chr5_4:69040437-69040456 Msa0866960:CDS 45.0%
TATTGAGGAAATGGCAGGGA+TGG - chr5_4:69040441-69040460 Msa0866960:CDS 45.0%
GCCATAGATGCTGCAATTGT+TGG - chr5_4:69040610-69040629 Msa0866960:intron 45.0%
GCCAACAATTGCAGCATCTA+TGG + chr5_4:69040614-69040633 None:intergenic 45.0%
! GGGTGTTATAATAAACCCCG+AGG + chr5_4:69040726-69040745 None:intergenic 45.0%
GTCTAGCAACACCCAAAGAA+CGG + chr5_4:69041159-69041178 None:intergenic 45.0%
!! TTCTTTGGGTGTTGCTAGAC+AGG - chr5_4:69041159-69041178 Msa0866960:CDS 45.0%
TGCCTAGGAGGATCAAATAG+AGG + chr5_4:69041342-69041361 None:intergenic 45.0%
GTTTCAGCACTATCATGCCT+AGG + chr5_4:69041357-69041376 None:intergenic 45.0%
AAGGTTCAGAGCTCTTGTGA+TGG + chr5_4:69041379-69041398 None:intergenic 45.0%
!! ATCACAAGAGCTCTGAACCT+TGG - chr5_4:69041378-69041397 Msa0866960:CDS 45.0%
TTGTTCCCATTCCAAGCCTT+CGG + chr5_4:69041543-69041562 None:intergenic 45.0%
TGACCGAGCAATGAAGAAGA+TGG + chr5_4:69041574-69041593 None:intergenic 45.0%
TTCATTGCTCGGTCAAAGCA+AGG - chr5_4:69041579-69041598 Msa0866960:intron 45.0%
! GAGTTGATTGAGAAGGCTGA+TGG - chr5_4:69041631-69041650 Msa0866960:intron 45.0%
!!! GGATTTGCTGGAGTTTTTCC+TGG - chr5_4:69041652-69041671 Msa0866960:intron 45.0%
! TTGCTGGAGTTTTTCCTGGT+AGG - chr5_4:69041656-69041675 Msa0866960:intron 45.0%
ATTGTTGTGAAGGACCTACC+AGG + chr5_4:69041673-69041692 None:intergenic 45.0%
GATATTGTCCTTACTGAGCC+TGG - chr5_4:69041933-69041952 Msa0866960:CDS 45.0%
GGCGATAATCAACACCATGA+AGG + chr5_4:69042323-69042342 None:intergenic 45.0%
TTTCCTTCACCCCTGTTACT+AGG - chr5_4:69042423-69042442 Msa0866960:intron 45.0%
AGTTTCCAACTGTCTGGTTG+TGG + chr5_4:69042489-69042508 None:intergenic 45.0%
TCTCTCAGTTTCCAACTGTC+TGG + chr5_4:69042495-69042514 None:intergenic 45.0%
!! TTTGCTACTGGTGTTGTGCT+AGG - chr5_4:69042519-69042538 Msa0866960:intron 45.0%
TGTTGTGCTAGGTAGCTACA+TGG - chr5_4:69042530-69042549 Msa0866960:intron 45.0%
CTACATGGCACTAATGACAG+TGG - chr5_4:69042545-69042564 Msa0866960:intron 45.0%
!!! GGTGTTTTTCTGGCTCATGA+AGG - chr5_4:69042566-69042585 Msa0866960:intron 45.0%
TTCAACAAAGGACCAGCTAC+GGG + chr5_4:69042804-69042823 None:intergenic 45.0%
TGGTCCTTTGTTGAAAGACC+TGG - chr5_4:69042809-69042828 Msa0866960:intron 45.0%
! AAGACCTGGTCTTCTCCTAT+TGG - chr5_4:69042823-69042842 Msa0866960:intron 45.0%
! AGACCTGGTCTTCTCCTATT+GGG - chr5_4:69042824-69042843 Msa0866960:intron 45.0%
TACGGAGGTAGTAAGACAGA+AGG + chr5_4:69043341-69043360 None:intergenic 45.0%
AAGAAGAGAGAGAAGCTCAG+TGG - chr5_4:69043714-69043733 Msa0866960:intron 45.0%
AGAAGAGAGAGAAGCTCAGT+GGG - chr5_4:69043715-69043734 Msa0866960:intron 45.0%
TCATCGAGTCTGTGTCTGAA+AGG - chr5_4:69043870-69043889 Msa0866960:intron 45.0%
TAGGGAGCTTCACACTCTAA+AGG - chr5_4:69043982-69044001 Msa0866960:intron 45.0%
AGGGAGCTTCACACTCTAAA+GGG - chr5_4:69043983-69044002 Msa0866960:intron 45.0%
CGAATCAGTCGTGAAGCTTA+AGG - chr5_4:69044012-69044031 Msa0866960:intron 45.0%
GGACAACCTTCAAGAAGAAC+AGG - chr5_4:69044083-69044102 Msa0866960:intron 45.0%
CGTAACCCTGTTCTTCTTGA+AGG + chr5_4:69044092-69044111 None:intergenic 45.0%
! AAAGGCATGCGACCACAATT+TGG - chr5_4:69044511-69044530 Msa0866960:intron 45.0%
AAGGCATGCGACCACAATTT+GGG - chr5_4:69044512-69044531 Msa0866960:intron 45.0%
!! CAGCGGTTGGTTTGAGTCAT+AGG + chr5_4:69037374-69037393 None:intergenic 50.0%
GTGAAGAAAGGGTGATGCAG+CGG + chr5_4:69037391-69037410 None:intergenic 50.0%
TGAACACTGTCCAACATGGG+AGG - chr5_4:69037537-69037556 Msa0866960:three_prime_UTR 50.0%
AAGGCTGATACCTCCCATGT+TGG + chr5_4:69037550-69037569 None:intergenic 50.0%
! CGTGGCGTGTTCTTGTGTTT+TGG - chr5_4:69037894-69037913 Msa0866960:three_prime_UTR 50.0%
TGCTCGAACACTTCCTCTAC+TGG + chr5_4:69038745-69038764 None:intergenic 50.0%
GCCAACAGGCTTCAAGTGTT+TGG - chr5_4:69038805-69038824 Msa0866960:intron 50.0%
GCCATTGCTTTGGCTAATGG+CGG - chr5_4:69038928-69038947 Msa0866960:intron 50.0%
ACCGCCATTAGCCAAAGCAA+TGG + chr5_4:69038932-69038951 None:intergenic 50.0%
ATTGCTTTGGCTAATGGCGG+TGG - chr5_4:69038931-69038950 Msa0866960:intron 50.0%
TAATGCTGCTGCTGCTCTCA+TGG - chr5_4:69039044-69039063 Msa0866960:CDS 50.0%
CTGGTTTAGCCCCCAAACAA+GGG - chr5_4:69039067-69039086 Msa0866960:CDS 50.0%
!! GATGCTGCAATTTTGGTCCC+AGG - chr5_4:69039923-69039942 Msa0866960:intron 50.0%
TGTTGCCGGAAGAGATTCTC+CGG + chr5_4:69040041-69040060 None:intergenic 50.0%
GTCCTCTGCAGTGACAAAAC+CGG - chr5_4:69040466-69040485 Msa0866960:CDS 50.0%
!! TTCCGGTTTTGTCACTGCAG+AGG + chr5_4:69040471-69040490 None:intergenic 50.0%
TAGAAGCCCTTGCTGCAAGA+AGG + chr5_4:69040573-69040592 None:intergenic 50.0%
TTCTTGCAGCAAGGGCTTCT+AGG - chr5_4:69040572-69040591 Msa0866960:intron 50.0%
!! GGCTTCTAGGACTGAGAATC+AGG - chr5_4:69040585-69040604 Msa0866960:intron 50.0%
! TGGCATGCTTGCTGATCCAA+AGG - chr5_4:69040630-69040649 Msa0866960:CDS 50.0%
! CATGCTTGCTGATCCAAAGG+AGG - chr5_4:69040633-69040652 Msa0866960:CDS 50.0%
GTTGTCGATGTGCAGTGTGT+GGG + chr5_4:69040746-69040765 None:intergenic 50.0%
AGTTGTCGATGTGCAGTGTG+TGG + chr5_4:69040747-69040766 None:intergenic 50.0%
TGAATTACACAGGCACGAGC+TGG - chr5_4:69040849-69040868 Msa0866960:intron 50.0%
GAACCTCTGCAACTGCAAAG+AGG - chr5_4:69041081-69041100 Msa0866960:intron 50.0%
CATCCTCTTTGCAGTTGCAG+AGG + chr5_4:69041087-69041106 None:intergenic 50.0%
GCAACTGCAAAGAGGATGTC+AGG - chr5_4:69041089-69041108 Msa0866960:intron 50.0%
CAAATTGCCATGGTGCACCA+GGG + chr5_4:69041308-69041327 None:intergenic 50.0%
ACAAATTGCCATGGTGCACC+AGG + chr5_4:69041309-69041328 None:intergenic 50.0%
GGTGCACCATGGCAATTTGT+TGG - chr5_4:69041309-69041328 Msa0866960:CDS 50.0%
TCAGCACTATCATGCCTAGG+AGG + chr5_4:69041354-69041373 None:intergenic 50.0%
TGATCAGCTTGCCATTGCCA+AGG - chr5_4:69041510-69041529 Msa0866960:intron 50.0%
CTTGCCATTGCCAAGGAAAC+TGG - chr5_4:69041517-69041536 Msa0866960:intron 50.0%
!! GAGAAGGCTGATGGATTTGC+TGG - chr5_4:69041640-69041659 Msa0866960:intron 50.0%
GTACCTAGTAACAGGGGTGA+AGG + chr5_4:69042429-69042448 None:intergenic 50.0%
CAACTGTCTGGTTGTGGAGA+TGG + chr5_4:69042483-69042502 None:intergenic 50.0%
CATCTCCACAACCAGACAGT+TGG - chr5_4:69042481-69042500 Msa0866960:intron 50.0%
GGGCTGCCATCATTTCATCA+GGG + chr5_4:69042730-69042749 None:intergenic 50.0%
AGGGCTGCCATCATTTCATC+AGG + chr5_4:69042731-69042750 None:intergenic 50.0%
GTGGTCGTGGAGAAGAAATG+AGG + chr5_4:69042962-69042981 None:intergenic 50.0%
TTAAGGGAATGGGATGGGGT+TGG - chr5_4:69043192-69043211 Msa0866960:intron 50.0%
TAAGGGAATGGGATGGGGTT+GGG - chr5_4:69043193-69043212 Msa0866960:intron 50.0%
ACTGCTCAGAGGACTCTTCA+TGG - chr5_4:69043740-69043759 Msa0866960:intron 50.0%
TGCAACTTCAGCACGTCTCT+TGG + chr5_4:69043843-69043862 None:intergenic 50.0%
AGAGACGTGCTGAAGTTGCA+CGG - chr5_4:69043843-69043862 Msa0866960:intron 50.0%
TCCTCAATGCCACTAGCTAG+AGG - chr5_4:69044223-69044242 Msa0866960:intron 50.0%
TCCTCTAGCTAGTGGCATTG+AGG + chr5_4:69044227-69044246 None:intergenic 50.0%
AACTCATGTGTTGCGAGGTG+CGG + chr5_4:69044538-69044557 None:intergenic 50.0%
TCAAAACCAGCCAACCTGTC+CGG - chr5_4:69044907-69044926 Msa0866960:five_prime_UTR 50.0%
AGAAAGGGTGATGCAGCGGT+TGG + chr5_4:69037387-69037406 None:intergenic 55.0%
!! CATGGGAGGTATCAGCCTTG+AGG - chr5_4:69037551-69037570 Msa0866960:three_prime_UTR 55.0%
CATCAGACGAAGGAGCCAAC+AGG - chr5_4:69038791-69038810 Msa0866960:intron 55.0%
TGGAAGACCTCCTGATTGGC+AGG - chr5_4:69038951-69038970 Msa0866960:intron 55.0%
! GCTGGTTTAGCCCCCAAACA+AGG - chr5_4:69039066-69039085 Msa0866960:CDS 55.0%
TCAAGCAGACGAGCATCAGC+AGG + chr5_4:69039983-69040002 None:intergenic 55.0%
TGCTGATGCTCGTCTGCTTG+AGG - chr5_4:69039982-69040001 Msa0866960:CDS 55.0%
GCTGATGCTCGTCTGCTTGA+GGG - chr5_4:69039983-69040002 Msa0866960:CDS 55.0%
!! TAGCAAAGGTGCTCCTGAGC+AGG - chr5_4:69040962-69040981 Msa0866960:CDS 55.0%
ATTGACAAGTTCGCCGAGCG+TGG - chr5_4:69041130-69041149 Msa0866960:CDS 55.0%
CAAAGAACGGAGTCCACGCT+CGG + chr5_4:69041146-69041165 None:intergenic 55.0%
GAGCGTGGACTCCGTTCTTT+GGG - chr5_4:69041145-69041164 Msa0866960:CDS 55.0%
AAGATAGCCCTGGTGCACCA+TGG - chr5_4:69041298-69041317 Msa0866960:intron 55.0%
TCGGCCAGTTTCCTTGGCAA+TGG + chr5_4:69041524-69041543 None:intergenic 55.0%
TTGCCAAGGAAACTGGCCGA+AGG - chr5_4:69041524-69041543 Msa0866960:intron 55.0%
AAGCCTTCGGCCAGTTTCCT+TGG + chr5_4:69041530-69041549 None:intergenic 55.0%
AAGGAAACTGGCCGAAGGCT+TGG - chr5_4:69041529-69041548 Msa0866960:intron 55.0%
AACTGGCCGAAGGCTTGGAA+TGG - chr5_4:69041534-69041553 Msa0866960:intron 55.0%
ACTGGCCGAAGGCTTGGAAT+GGG - chr5_4:69041535-69041554 Msa0866960:intron 55.0%
GATGCTACAGATGCCGCTAG+AGG - chr5_4:69041903-69041922 Msa0866960:CDS 55.0%
CACTCAGACCAGGCTCAGTA+AGG + chr5_4:69041944-69041963 None:intergenic 55.0%
GCACCCAATAGGAGAAGACC+AGG + chr5_4:69042830-69042849 None:intergenic 55.0%
CTAGGAGCTGCCTTATCAGC+TGG - chr5_4:69043076-69043095 Msa0866960:intron 55.0%
TGTGGCTGCAGCTGTTATCG+CGG - chr5_4:69044594-69044613 Msa0866960:intron 55.0%
GAAACGGTAACCGGACAGGT+TGG + chr5_4:69044920-69044939 None:intergenic 55.0%
GCGGTGGAAGACCTCCTGAT+TGG - chr5_4:69038947-69038966 Msa0866960:intron 60.0%
CAACTTGCGCTAGACCCCAG+TGG - chr5_4:69040762-69040781 Msa0866960:intron 60.0%
! ACAGGCACGAGCTGGTGTCA+GGG - chr5_4:69040857-69040876 Msa0866960:intron 60.0%
CGAGCGTGGACTCCGTTCTT+TGG - chr5_4:69041144-69041163 Msa0866960:CDS 60.0%
TTGTCACCAGGTCCCGTAGC+TGG - chr5_4:69042789-69042808 Msa0866960:intron 60.0%
AAAGGACCAGCTACGGGACC+TGG + chr5_4:69042798-69042817 None:intergenic 60.0%
!! GGGGTTGGGCTGGTGTAATC+TGG - chr5_4:69043207-69043226 Msa0866960:CDS 60.0%
CTCAGTGGGCAACTGCTCAG+AGG - chr5_4:69043729-69043748 Msa0866960:intron 60.0%
GCTGCTGCTGCTCTCATGGC+TGG - chr5_4:69039048-69039067 Msa0866960:CDS 65.0%
CACAGGCACGAGCTGGTGTC+AGG - chr5_4:69040856-69040875 Msa0866960:intron 65.0%
GGAATGGGATGGGGTTGGGC+TGG - chr5_4:69043197-69043216 Msa0866960:intron 65.0%
GCGAGGTGCGGCCCAAATTG+TGG + chr5_4:69044526-69044545 None:intergenic 65.0%
GGCTGCAGCTGTTATCGCGG+TGG - chr5_4:69044597-69044616 Msa0866960:intron 65.0%
! CGGTAACCGGACAGGTTGGC+TGG + chr5_4:69044916-69044935 None:intergenic 65.0%
! GGCACGAGCTGGTGTCAGGG+AGG - chr5_4:69040860-69040879 Msa0866960:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 69037346 69044940 69037346 ID=Msa0866960;Name=Msa0866960
chr5_4 mRNA 69037346 69044940 69037346 ID=Msa0866960-mRNA-1;Parent=Msa0866960;Name=Msa0866960-mRNA-1;_AED=0.09;_eAED=0.09;_QI=206|0.61|0.63|1|0.66|0.63|19|865|886
chr5_4 exon 69037346 69038307 69037346 ID=Msa0866960-mRNA-1:exon:21836;Parent=Msa0866960-mRNA-1
chr5_4 exon 69038422 69038603 69038422 ID=Msa0866960-mRNA-1:exon:21835;Parent=Msa0866960-mRNA-1
chr5_4 exon 69039012 69039140 69039012 ID=Msa0866960-mRNA-1:exon:21834;Parent=Msa0866960-mRNA-1
chr5_4 exon 69039418 69039591 69039418 ID=Msa0866960-mRNA-1:exon:21833;Parent=Msa0866960-mRNA-1
chr5_4 exon 69039681 69039841 69039681 ID=Msa0866960-mRNA-1:exon:21832;Parent=Msa0866960-mRNA-1
chr5_4 exon 69039931 69040012 69039931 ID=Msa0866960-mRNA-1:exon:21831;Parent=Msa0866960-mRNA-1
chr5_4 exon 69040146 69040178 69040146 ID=Msa0866960-mRNA-1:exon:21830;Parent=Msa0866960-mRNA-1
chr5_4 exon 69040264 69040502 69040264 ID=Msa0866960-mRNA-1:exon:21829;Parent=Msa0866960-mRNA-1
chr5_4 exon 69040613 69040777 69040613 ID=Msa0866960-mRNA-1:exon:21828;Parent=Msa0866960-mRNA-1
chr5_4 exon 69040863 69041007 69040863 ID=Msa0866960-mRNA-1:exon:21827;Parent=Msa0866960-mRNA-1
chr5_4 exon 69041106 69041210 69041106 ID=Msa0866960-mRNA-1:exon:21826;Parent=Msa0866960-mRNA-1
chr5_4 exon 69041303 69041425 69041303 ID=Msa0866960-mRNA-1:exon:21825;Parent=Msa0866960-mRNA-1
chr5_4 exon 69041659 69041751 69041659 ID=Msa0866960-mRNA-1:exon:21824;Parent=Msa0866960-mRNA-1
chr5_4 exon 69041773 69041980 69041773 ID=Msa0866960-mRNA-1:exon:21823;Parent=Msa0866960-mRNA-1
chr5_4 exon 69041987 69042179 69041987 ID=Msa0866960-mRNA-1:exon:21822;Parent=Msa0866960-mRNA-1
chr5_4 exon 69042198 69042376 69042198 ID=Msa0866960-mRNA-1:exon:21821;Parent=Msa0866960-mRNA-1
chr5_4 exon 69043198 69043415 69043198 ID=Msa0866960-mRNA-1:exon:21820;Parent=Msa0866960-mRNA-1
chr5_4 exon 69043467 69043553 69043467 ID=Msa0866960-mRNA-1:exon:21819;Parent=Msa0866960-mRNA-1
chr5_4 exon 69044687 69044940 69044687 ID=Msa0866960-mRNA-1:exon:21818;Parent=Msa0866960-mRNA-1
chr5_4 five_prime_UTR 69044735 69044940 69044735 ID=Msa0866960-mRNA-1:five_prime_utr;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69044687 69044734 69044687 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69043467 69043553 69043467 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69043198 69043415 69043198 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69042198 69042376 69042198 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69041987 69042179 69041987 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69041773 69041980 69041773 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69041659 69041751 69041659 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69041303 69041425 69041303 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69041106 69041210 69041106 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69040863 69041007 69040863 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69040613 69040777 69040613 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69040264 69040502 69040264 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69040146 69040178 69040146 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69039931 69040012 69039931 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69039681 69039841 69039681 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69039418 69039591 69039418 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69039012 69039140 69039012 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69038422 69038603 69038422 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 CDS 69038211 69038307 69038211 ID=Msa0866960-mRNA-1:cds;Parent=Msa0866960-mRNA-1
chr5_4 three_prime_UTR 69037346 69038210 69037346 ID=Msa0866960-mRNA-1:three_prime_utr;Parent=Msa0866960-mRNA-1
Gene Sequence

>Msa0866960

ATGGGAGGTATCAGCCTTGAGGAGATAAAAAACGAGAACGTTGATCTGGAACGAATTCCAGTAGAGGAAGTGTTCGAGCAGCTGAAATGTTCAAGAGCAGGTTTAACATCAGACGAAGGAGCCAACAGGCTTCAATTCTTAGGATTTATGTGGAACCCTTTATCATGGGTTATGGAAGCTGCTGCTATTATGGCCATTGCTTTGGCTAATGGCGGTGGAAGACCTCCTGATTGGCAGGATTTTGTTGGTATCATTTCTCTTTTGGTTATTAACTCAACTATCAGTTTCATTGAAGAGAATAATGCTGGTAATGCTGCTGCTGCTCTCATGGCTGGTTTAGCCCCCAAACAAGGGTGGTCTGAAGAAGATGCTGCAATTTTGGTCCCAGGTGATATCATCAGCATTAAATTAGGAGATATCATTCCTGCTGATGCTCGTCTGCTTGAGGGTGATGCTTTGAGTGTTGATCAGTCTGCTTTAACCGGAGAATCTCTTCCGGCAACAAAGAATCCCTCAGATGAAGTGTTTTCTGGTGAGATTGAAGCAGTTGTCATTGCTACTGGAGTGCACACATTTTTTGGTAAAGCTGCTCATTTGGTTGACAGCACCAATCAAGTTGGTCACTTTCAGAAAGTCCTAACAGCAATTGGTAATTTCTGCATTTGCTCAATTGCTGTTGGAATACTGATTGAGCTCGTTGTCATGTATCCGATACAACACCGCAAAGACGGAATTGACAATCTTTTGGTTCTATTGATTGGAGGAATTCCAATTGCTATGCCAACTGTTTTGTCTGTTACCATGGCTATTGGTTCTCACAGACTTTCTCAACAAGGTGCTATTACAAAGAGAATGACAGCTATTGAGGAAATGGCAGGGATGGATGTCCTCTGCAGTGACAAAACCGGAACTCTGACTTTAAATAAGTTATCTGTTTTTGCTAAGGGTGTAGAGAAGGATTATGTTATCCTTCTTGCAGCAAGGGCTTCTAGGACTGAGAATCAGGATGCCATAGATGCTGCAATTGCACGAGCTGGTGTCAGGGAGGTTCATTTTTTCCCATTCAATCCTGTAGACAAGAGAACTGCTTTAACTTACATTGACTCTGACGGAAATTGGCATAGATCTAGCAAAGGTGCTCCTGAGCAGATATTGAACCTCTGCAACTGCAAAGAGGATGTCAGGAAAAAAGCTCATTCAACAATTGACAAGTTCGCCGAGCGTGGACTCCGTTCTTTGGGTGTTGCTAGACAGGAAATACCTGAGAAAGATAAAGATAGCCCTGGTGCACCATGGCAATTTGTTGGTCTGTTACCTCTATTTGATCCTCCTAGGCATGATAGTGCTGAAACCATCACAAGAGCTCTGAACCTTGGTGTGAATGTTAAGATGATTACTGGTGATCAGCTTGCCATTGCCAAGGAAACTGGCCGAAGGCTTGGAATGGGAACAAACATGTATCCATCTTCTTCATTGCTCGGTCAAAGCAAGGATGCTGCTGTTTCAGCTCTTCCAGTTGATGAGTTGATTGAGAAGGCTGATGGATTTGCTGGAGTTTTTCCTGAACACAAGTATGAAATCGTAAAGAAACTGCAAGAGAGGAAACATATATGTGGAATGACAGGTGATGGTGTCAACGACGCTCCTGCGTTAAAGAGAGCAGATATTGGAATTGCTGTTGCTGATGCTACAGATGCCGCTAGAGGTGCTTCTGATATTGTCCTTACTGAGCCTGGTCTGAGTGTCATTATTAGTGCAGTGCTCACAAGCAGAGCAATTTTCCAAAGGATGAAGAACTATACTATCTACGCTGTGTCAATTACCATTCGTATTGTGTTTGGTTTCATGTTCATTGCCTTGATCTGGAAGTTTGATTTTGCACCCTTCATGGTGTTGATTATCGCCATACTAAATGATGGTACCATTATGACAATATCCAAGGATAGAGTGAAACCATCTCCACAACCAGACAGTTGGAAACTGAGAGAGATATTTGCTACTGGTGTTGTGCTAGGTAGCTACATGGCACTAATGACAGTGGTGTTTTTCTGGCTCATGAAGGATACCGATTTCTTCTCGGACAAGTTTGGTGTGAGATCTATCCGAAAAAACCCTGATGAAATGATGGCAGCCCTCTACCTACAAGTCAGTATTATAAGTCAGGCACTAATTTTTGTCACCAGGTCCCGTAGCTGGTCCTTTGTTGAAAGACCTGGTCTTCTCCTATTGGGTGCTTTTATGATTGCTCAGCTGGTGGCAACTTTTATAGCAGTATATGCTAATTGGAGCTTTGCAAGAATTAAGGGAATGGGATGGGGTTGGGCTGGTGTAATCTGGATGTACAGTATAGTGACATATATCCCCCTTGATATACTCAAATTCACTGCTTTCACAACAAAGAAAGACTATGGCAAAGAAGAGAGAGAAGCTCAGTGGGCAACTGCTCAGAGGACTCTTCATGGTCTTCAGTCACCTGACACAACCAACCTTTTCAATGACAAGAATAGCTACAGGGAGCTTTCTGAGATTGCTGAGCAAGCCAAGAGACGTGCTGAAGTTGCACGGCTTAGGGAGCTTCACACTCTAAAGGGTCATGTCGAATCAGTCGTGAAGCTTAAGGGACTTGATATCGACACTATGCAACAACATTATACTGTTTAA
Protein sequence

>Msa0866960

MGGISLEEIKNENVDLERIPVEEVFEQLKCSRAGLTSDEGANRLQFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIISLLVINSTISFIEENNAGNAAAALMAGLAPKQGWSEEDAAILVPGDIISIKLGDIIPADARLLEGDALSVDQSALTGESLPATKNPSDEVFSGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGILIELVVMYPIQHRKDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVFAKGVEKDYVILLAARASRTENQDAIDAAIARAGVREVHFFPFNPVDKRTALTYIDSDGNWHRSSKGAPEQILNLCNCKEDVRKKAHSTIDKFAERGLRSLGVARQEIPEKDKDSPGAPWQFVGLLPLFDPPRHDSAETITRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQSKDAAVSALPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLREIFATGVVLGSYMALMTVVFFWLMKDTDFFSDKFGVRSIRKNPDEMMAALYLQVSIISQALIFVTRSRSWSFVERPGLLLLGAFMIAQLVATFIAVYANWSFARIKGMGWGWAGVIWMYSIVTYIPLDILKFTAFTTKKDYGKEEREAQWATAQRTLHGLQSPDTTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTMQQHYTV*