Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568910 | RHN67223.1 | 82.500 | 40 | 7 | 0 | 1 | 40 | 81 | 120 | 1.42e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568910 | A0A396IRV8 | 82.500 | 40 | 7 | 0 | 1 | 40 | 81 | 120 | 6.78e-15 | 74.3 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006040 | Msa0568910 | 0.811641 | 6.323595e-51 | -8.615850e-47 |
| Msa0011960 | Msa0568910 | 0.803991 | 2.676225e-49 | -8.615850e-47 |
| Msa0023000 | Msa0568910 | 0.832519 | 9.024696e-56 | -8.615850e-47 |
| Msa0052770 | Msa0568910 | 0.802599 | 5.197889e-49 | -8.615850e-47 |
| Msa0054750 | Msa0568910 | 0.806468 | 8.105141e-50 | -8.615850e-47 |
| Msa0097780 | Msa0568910 | 0.813594 | 2.365290e-51 | -8.615850e-47 |
| Msa0118780 | Msa0568910 | 0.809530 | 1.808337e-50 | -8.615850e-47 |
| Msa0162130 | Msa0568910 | 0.803581 | 3.255376e-49 | -8.615850e-47 |
| Msa0189520 | Msa0568910 | 0.803923 | 2.764264e-49 | -8.615850e-47 |
| Msa0442200 | Msa0568910 | 0.801755 | 7.753516e-49 | -8.615850e-47 |
| Msa0255080 | Msa0568910 | 0.826639 | 2.428918e-54 | -8.615850e-47 |
| Msa0259370 | Msa0568910 | 0.813022 | 3.158810e-51 | -8.615850e-47 |
| Msa0298700 | Msa0568910 | 0.810431 | 1.156490e-50 | -8.615850e-47 |
| Msa0534900 | Msa0568910 | 0.807256 | 5.524975e-50 | -8.615850e-47 |
| Msa0568910 | Msa0661210 | 0.809520 | 1.816935e-50 | -8.615850e-47 |
| Msa0568910 | Msa0716840 | 0.810016 | 1.421678e-50 | -8.615850e-47 |
| Msa0568910 | Msa0747260 | 0.810215 | 1.287662e-50 | -8.615850e-47 |
| Msa0568910 | Msa0784860 | 0.829377 | 5.327463e-55 | -8.615850e-47 |
| Msa0568910 | Msa0926460 | 0.803921 | 2.768069e-49 | -8.615850e-47 |
| Msa0568910 | Msa0965860 | 0.806181 | 9.319663e-50 | -8.615850e-47 |
| Msa0568910 | Msa1091940 | 0.809280 | 2.045645e-50 | -8.615850e-47 |
| Msa0568910 | Msa1143930 | -0.818316 | 2.088736e-52 | -8.615850e-47 |
| Msa0568910 | Msa1171870 | 0.810068 | 1.384946e-50 | -8.615850e-47 |
| Msa0568910 | Msa1173140 | 0.800323 | 1.521234e-48 | -8.615850e-47 |
| Msa0568910 | Msa1217430 | -0.804817 | 1.800476e-49 | -8.615850e-47 |
| Msa0568910 | Msa1302190 | -0.811100 | 8.288423e-51 | -8.615850e-47 |
| Msa0568910 | Msa1306430 | 0.810077 | 1.379197e-50 | -8.615850e-47 |
| Msa0568910 | Msa1359630 | 0.818600 | 1.800937e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568910 | MtrunA17_Chr3g0100401 | 82.500 | 40 | 7 | 0 | 1 | 40 | 81 | 120 | 1.30e-18 | 74.3 |
| Msa0568910 | MtrunA17_Chr7g0248821 | 52.055 | 73 | 31 | 2 | 1 | 72 | 80 | 149 | 4.44e-16 | 69.3 |
| Msa0568910 | MtrunA17_Chr1g0206511 | 50.685 | 73 | 32 | 2 | 1 | 72 | 81 | 150 | 8.87e-16 | 68.6 |
| Msa0568910 | MtrunA17_Chr7g0269671 | 53.125 | 64 | 29 | 1 | 1 | 63 | 255 | 318 | 6.41e-15 | 67.8 |
| Msa0568910 | MtrunA17_Chr1g0173691 | 48.438 | 64 | 32 | 1 | 1 | 63 | 254 | 317 | 1.04e-12 | 61.6 |
| Msa0568910 | MtrunA17_Chr2g0307571 | 62.500 | 40 | 15 | 0 | 1 | 40 | 1 | 40 | 3.06e-12 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 22 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAAGCTTGAAGGAGGTT+AGG | 0.401135 | 4_1:+70553458 | Msa0568910:CDS |
| GAAACAAGTGGAATCTTCCT+TGG | 0.446884 | 4_1:+70553498 | Msa0568910:CDS |
| TTGAAGGAGGTTAGGAGAGT+TGG | 0.449870 | 4_1:+70553466 | Msa0568910:CDS |
| TTCCTTTCAAGTTTCAAAGA+AGG | 0.453473 | 4_1:+70547161 | Msa0568910:CDS |
| AACAGAGACAAGAAGCTTGA+AGG | 0.472369 | 4_1:+70553450 | Msa0568910:CDS |
| TACCTTCTTTGAAACTTGAA+AGG | 0.494007 | 4_1:-70547163 | None:intergenic |
| GCGATATCCGAGAGTAATGT+TGG | 0.517711 | 4_1:+70547088 | Msa0568910:CDS |
| TCCTTGGAGAAACCACTCAA+TGG | 0.529204 | 4_1:+70553514 | Msa0568910:CDS |
| TGGAGCATTGTTGAAACAAG+TGG | 0.536647 | 4_1:+70553486 | Msa0568910:CDS |
| TTTATCGCCAACATTACTCT+CGG | 0.566760 | 4_1:-70547095 | None:intergenic |
| AAGATATGTGCACGAAGGGA+AGG | 0.570936 | 4_1:+70547066 | Msa0568910:CDS |
| AATCGGTCCAGTGATCGGAT+TGG | 0.575005 | 4_1:+70553400 | Msa0568910:intron |
| TCCATTGAGTGGTTTCTCCA+AGG | 0.591488 | 4_1:-70553515 | None:intergenic |
| TGGGAAGATATGTGCACGAA+GGG | 0.604218 | 4_1:+70547062 | Msa0568910:CDS |
| ATACATGCACTTCCATTGAG+TGG | 0.606875 | 4_1:-70553526 | None:intergenic |
| GAAAGGAATTCTCATGTCCG+AGG | 0.607559 | 4_1:-70547146 | None:intergenic |
| TAGCTTATCTCTAACACCCT+CGG | 0.612730 | 4_1:+70547129 | Msa0568910:CDS |
| AAAGGAATTCTCATGTCCGA+GGG | 0.633384 | 4_1:-70547145 | None:intergenic |
| GAGGGTGTTAGAGATAAGCT+AGG | 0.636772 | 4_1:-70547127 | None:intergenic |
| GGTCCAGTGATCGGATTGGA+CGG | 0.637758 | 4_1:+70553404 | Msa0568910:intron |
| AGAGACAAGAAGCTTGAAGG+AGG | 0.641496 | 4_1:+70553453 | Msa0568910:CDS |
| ATGGGAAGATATGTGCACGA+AGG | 0.658528 | 4_1:+70547061 | Msa0568910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATAATTAAATAAAA+AGG | + | chr4_1:70548710-70548729 | Msa0568910:intron | 0.0% |
| !! | GTGATTTATTTATTTATATA+AGG | - | chr4_1:70548671-70548690 | None:intergenic | 10.0% |
| !! | AAAATAATTAAATAAAAAGG+AGG | + | chr4_1:70548713-70548732 | Msa0568910:intron | 10.0% |
| !! | AAATAATTAAATAAAAAGGA+GGG | + | chr4_1:70548714-70548733 | Msa0568910:intron | 10.0% |
| !!! | TCTATTTTTTAATTGAAAAT+AGG | + | chr4_1:70549716-70549735 | Msa0568910:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr4_1:70551037-70551056 | Msa0568910:intron | 10.0% |
| !! | ATTTATTTAAAAAAAATCAG+CGG | - | chr4_1:70552202-70552221 | None:intergenic | 10.0% |
| !! | TTAATTAAGTTATATTATGA+TGG | + | chr4_1:70553303-70553322 | Msa0568910:intron | 10.0% |
| !!! | ATTATCATATCTTTTTGAAT+TGG | - | chr4_1:70547698-70547717 | None:intergenic | 15.0% |
| !!! | TTTAATTGAGTTTTAATTGT+TGG | - | chr4_1:70548022-70548041 | None:intergenic | 15.0% |
| !! | AAATTTATAAACTACAATCA+AGG | + | chr4_1:70548156-70548175 | Msa0568910:intron | 15.0% |
| !! | AGTGATTAGTATTATAAATA+AGG | - | chr4_1:70548522-70548541 | None:intergenic | 15.0% |
| !!! | ACAATTAAGAAATTTGTTAA+GGG | + | chr4_1:70549258-70549277 | Msa0568910:intron | 15.0% |
| !!! | TTTTCATATTATTTGATATG+AGG | - | chr4_1:70550221-70550240 | None:intergenic | 15.0% |
| !! | AAAAAAACATAATTACAAAG+TGG | - | chr4_1:70550841-70550860 | None:intergenic | 15.0% |
| !! | AAAATTGTGTCAATTAAATT+GGG | - | chr4_1:70551002-70551021 | None:intergenic | 15.0% |
| !! | AAAGTTGAATATATTGTATT+GGG | + | chr4_1:70551062-70551081 | Msa0568910:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr4_1:70551102-70551121 | Msa0568910:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr4_1:70551103-70551122 | Msa0568910:intron | 15.0% |
| !! | TTATAGTTTAATACTTGTAT+TGG | - | chr4_1:70551345-70551364 | None:intergenic | 15.0% |
| !!! | TTAAAATTAGTCATCTTTTT+AGG | - | chr4_1:70551587-70551606 | None:intergenic | 15.0% |
| !!! | TAGAATTGACTTATTTTAAA+TGG | - | chr4_1:70552010-70552029 | None:intergenic | 15.0% |
| !!! | TTGTATTTCATTTAGTTTAT+TGG | - | chr4_1:70552113-70552132 | None:intergenic | 15.0% |
| !! | TTTATTTAAAAAAAATCAGC+GGG | - | chr4_1:70552201-70552220 | None:intergenic | 15.0% |
| !! | ATATGGTTATAAATTAATAG+AGG | + | chr4_1:70552337-70552356 | Msa0568910:intron | 15.0% |
| !! | TATGGTTATAAATTAATAGA+GGG | + | chr4_1:70552338-70552357 | Msa0568910:intron | 15.0% |
| !! | AATGTACATGTTATAATAAT+CGG | + | chr4_1:70553383-70553402 | Msa0568910:intron | 15.0% |
| !! | ATGACTATTAATAAGAATCA+AGG | + | chr4_1:70547211-70547230 | Msa0568910:intron | 20.0% |
| !! | TGATATAAAACATTTCATGT+TGG | + | chr4_1:70547415-70547434 | Msa0568910:intron | 20.0% |
| !! | TGTAACAGTTTATATGAAAT+AGG | - | chr4_1:70547511-70547530 | None:intergenic | 20.0% |
| !! | GTAACAATTAAAATATCACA+TGG | + | chr4_1:70547799-70547818 | Msa0568910:intron | 20.0% |
| !! | GAATTTAAATAGAATAGACA+TGG | + | chr4_1:70547821-70547840 | Msa0568910:intron | 20.0% |
| !! | AGAAAGAAGAAACAAATATA+TGG | + | chr4_1:70547893-70547912 | Msa0568910:intron | 20.0% |
| !! | GAAAGAAGAAACAAATATAT+GGG | + | chr4_1:70547894-70547913 | Msa0568910:intron | 20.0% |
| !! | TCTTTAATTGAAATTGAAAC+AGG | + | chr4_1:70547945-70547964 | Msa0568910:intron | 20.0% |
| !! | CTTTAATTGAAATTGAAACA+GGG | + | chr4_1:70547946-70547965 | Msa0568910:intron | 20.0% |
| !! | TAAAACTCAATTAAACAACT+AGG | + | chr4_1:70548027-70548046 | Msa0568910:intron | 20.0% |
| !!! | TGATGAATTTTGTTAAATTC+AGG | - | chr4_1:70548208-70548227 | None:intergenic | 20.0% |
| !!! | GAAAAACAATTTAAGGTAAA+GGG | - | chr4_1:70548374-70548393 | None:intergenic | 20.0% |
| !!! | AGAAAAACAATTTAAGGTAA+AGG | - | chr4_1:70548375-70548394 | None:intergenic | 20.0% |
| !! | GATTTCAGAAAAACAATTTA+AGG | - | chr4_1:70548381-70548400 | None:intergenic | 20.0% |
| !! | TATTATAAATAAGGAAGCTT+AGG | - | chr4_1:70548513-70548532 | None:intergenic | 20.0% |
| !! | AGAAAGAAGAATAAGTTATT+GGG | - | chr4_1:70548564-70548583 | None:intergenic | 20.0% |
| !! | TAGAAAGAAGAATAAGTTAT+TGG | - | chr4_1:70548565-70548584 | None:intergenic | 20.0% |
| !! | ATTATTAGTGTAAGTAGAAT+TGG | - | chr4_1:70548597-70548616 | None:intergenic | 20.0% |
| !!! | TAAAGTAATTTCTCTTTTGT+CGG | - | chr4_1:70548829-70548848 | None:intergenic | 20.0% |
| !! | AAACTTTACAAAAAGTTCTT+TGG | + | chr4_1:70549011-70549030 | Msa0568910:intron | 20.0% |
| !! | AACTTTACAAAAAGTTCTTT+GGG | + | chr4_1:70549012-70549031 | Msa0568910:intron | 20.0% |
| !!! | CACAATTAAGAAATTTGTTA+AGG | + | chr4_1:70549257-70549276 | Msa0568910:intron | 20.0% |
| !!! | TTCATCTTAATTTTCACATT+CGG | - | chr4_1:70550365-70550384 | None:intergenic | 20.0% |
| !!! | TGAACAAATGTTTTAAAACT+TGG | + | chr4_1:70550926-70550945 | Msa0568910:intron | 20.0% |
| !! | CAAAATTGTGTCAATTAAAT+TGG | - | chr4_1:70551003-70551022 | None:intergenic | 20.0% |
| !! | GAAAGTTGAATATATTGTAT+TGG | + | chr4_1:70551061-70551080 | Msa0568910:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr4_1:70551135-70551154 | Msa0568910:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr4_1:70551136-70551155 | Msa0568910:intron | 20.0% |
| !!! | AAAAGATGACTAATTTTAAG+TGG | + | chr4_1:70551588-70551607 | Msa0568910:intron | 20.0% |
| !!! | AAAGATGACTAATTTTAAGT+GGG | + | chr4_1:70551589-70551608 | Msa0568910:intron | 20.0% |
| !!! | TTGATATTTTGATCAAATAG+TGG | + | chr4_1:70552134-70552153 | Msa0568910:intron | 20.0% |
| !!! | ATATAATTCTTCAAGTTCAT+TGG | - | chr4_1:70552321-70552340 | None:intergenic | 20.0% |
| !! | AATGAACTTGAAGAATTATA+TGG | + | chr4_1:70552320-70552339 | Msa0568910:intron | 20.0% |
| !!! | ATATTATTTCTGTTATCACA+AGG | - | chr4_1:70552568-70552587 | None:intergenic | 20.0% |
| !! | TAATCTTTCAAAATTACCAA+TGG | - | chr4_1:70552676-70552695 | None:intergenic | 20.0% |
| !!! | TAATTTTGAAAGATTAAGCA+TGG | + | chr4_1:70552680-70552699 | Msa0568910:intron | 20.0% |
| !!! | AATTTTGAAAGATTAAGCAT+GGG | + | chr4_1:70552681-70552700 | Msa0568910:intron | 20.0% |
| !! | ATGTTAGTTAAAAATTCGTA+TGG | + | chr4_1:70553169-70553188 | Msa0568910:intron | 20.0% |
| !!! | AAATTTTGCCTATTTTCAAA+TGG | - | chr4_1:70553258-70553277 | None:intergenic | 20.0% |
| ! | AGTTGTCTATATGAAAATAC+TGG | - | chr4_1:70547274-70547293 | None:intergenic | 25.0% |
| ! | TCAATTACGTAACTTTATCT+TGG | - | chr4_1:70547758-70547777 | None:intergenic | 25.0% |
| ! | ACAACATCAAGTAATTGATT+TGG | + | chr4_1:70547971-70547990 | Msa0568910:intron | 25.0% |
| ! | TGTGAGATTATGAGAAATTA+GGG | - | chr4_1:70548281-70548300 | None:intergenic | 25.0% |
| ! | TTGTGAGATTATGAGAAATT+AGG | - | chr4_1:70548282-70548301 | None:intergenic | 25.0% |
| !!! | TTTTATGTTAAACCGCTTTT+TGG | - | chr4_1:70548479-70548498 | None:intergenic | 25.0% |
| ! | CACTCTTCTTAAATCTATTT+AGG | + | chr4_1:70548538-70548557 | Msa0568910:intron | 25.0% |
| ! | TTACTTTACAGATGAAAAGA+TGG | + | chr4_1:70548841-70548860 | Msa0568910:intron | 25.0% |
| ! | ATGAAAAATGGTCATCAATT+TGG | + | chr4_1:70549331-70549350 | Msa0568910:intron | 25.0% |
| ! | TGAAAAATGGTCATCAATTT+GGG | + | chr4_1:70549332-70549351 | Msa0568910:intron | 25.0% |
| !!! | TTATACTACATGATTTTGGT+CGG | - | chr4_1:70549415-70549434 | None:intergenic | 25.0% |
| !!! | ACTCTAAATTTGGAATGTTT+TGG | - | chr4_1:70549464-70549483 | None:intergenic | 25.0% |
| ! | AAAACATTCCAAATTTAGAG+TGG | + | chr4_1:70549463-70549482 | Msa0568910:intron | 25.0% |
| !!! | GAGTCAATTTTTTTAGTTCT+AGG | + | chr4_1:70549528-70549547 | Msa0568910:intron | 25.0% |
| ! | AAGGATAATGTAGAAGATTA+AGG | - | chr4_1:70549574-70549593 | None:intergenic | 25.0% |
| ! | ACGTGATTAATGAAAAAGTA+AGG | - | chr4_1:70549603-70549622 | None:intergenic | 25.0% |
| ! | TTAGTGTTGTCAAAAGAAAA+AGG | - | chr4_1:70549762-70549781 | None:intergenic | 25.0% |
| !! | TAATTTCAGGTGCTAATTAT+TGG | + | chr4_1:70549848-70549867 | Msa0568910:intron | 25.0% |
| !! | TAAACTAAACTCTAGTTTAC+CGG | - | chr4_1:70550198-70550217 | None:intergenic | 25.0% |
| ! | TGTGAATTGTTAAATTTGCA+AGG | - | chr4_1:70550416-70550435 | None:intergenic | 25.0% |
| !! | TAACCATAATTTGTCTGTAA+TGG | + | chr4_1:70550575-70550594 | Msa0568910:intron | 25.0% |
| !! | CATTTTATATTCCTCTATCA+GGG | - | chr4_1:70550608-70550627 | None:intergenic | 25.0% |
| ! | TATTTGATTGGAAACTGATT+AGG | + | chr4_1:70550756-70550775 | Msa0568910:intron | 25.0% |
| ! | AAAACATTTGTTCACATCAA+AGG | - | chr4_1:70550920-70550939 | None:intergenic | 25.0% |
| !!! | CAAATGTTTTAAAACTTGGA+TGG | + | chr4_1:70550930-70550949 | Msa0568910:intron | 25.0% |
| ! | AAACTATAACACATGTCAAA+AGG | + | chr4_1:70551356-70551375 | Msa0568910:intron | 25.0% |
| ! | GGGAAAAATGAAAAACTTAA+AGG | - | chr4_1:70551400-70551419 | None:intergenic | 25.0% |
| !! | GAAACTTAAAGGATTTGTTT+GGG | - | chr4_1:70551449-70551468 | None:intergenic | 25.0% |
| !! | TGAAACTTAAAGGATTTGTT+TGG | - | chr4_1:70551450-70551469 | None:intergenic | 25.0% |
| !! | AAAACTAAAAGGACTTGTTT+GGG | - | chr4_1:70551701-70551720 | None:intergenic | 25.0% |
| !! | AAAAACTAAAAGGACTTGTT+TGG | - | chr4_1:70551700-70551719 | None:intergenic | 25.0% |
| ! | GAAACGATTCAAAAACTAAA+AGG | - | chr4_1:70551690-70551709 | None:intergenic | 25.0% |
| !!! | TTTCAAACAAGTCATTTTAG+AGG | + | chr4_1:70551505-70551524 | Msa0568910:intron | 25.0% |
| !!! | ATCTTTTTAGGTATGACAAA+TGG | - | chr4_1:70551575-70551594 | None:intergenic | 25.0% |
| ! | GAAACGATTCAAAAACTAAA+AGG | + | chr4_1:70551690-70551709 | Msa0568910:intron | 25.0% |
| !! | AAAAACTAAAAGGACTTGTT+TGG | + | chr4_1:70551700-70551719 | Msa0568910:intron | 25.0% |
| !! | AAAACTAAAAGGACTTGTTT+GGG | + | chr4_1:70551701-70551720 | Msa0568910:intron | 25.0% |
| !! | TGAAACTTAAATGACCATTT+TGG | + | chr4_1:70551729-70551748 | Msa0568910:intron | 25.0% |
| !! | GAAACTTAAATGACCATTTT+GGG | + | chr4_1:70551730-70551749 | Msa0568910:intron | 25.0% |
| ! | GAACGAAAATAATTTCTGAA+GGG | + | chr4_1:70552245-70552264 | Msa0568910:intron | 25.0% |
| ! | AAAATAAAAGTGGGTGAAAT+GGG | - | chr4_1:70552508-70552527 | None:intergenic | 25.0% |
| ! | CACAATAACAGTTCATTATA+AGG | - | chr4_1:70553079-70553098 | None:intergenic | 25.0% |
| ! | CTTATAATGAACTGTTATTG+TGG | + | chr4_1:70553077-70553096 | Msa0568910:intron | 25.0% |
| ! | GAATCCTGTACAAAAATTTA+TGG | - | chr4_1:70553215-70553234 | None:intergenic | 25.0% |
| !!! | TACAGGATTCGTTTTTTAAT+GGG | + | chr4_1:70553225-70553244 | Msa0568910:intron | 25.0% |
| !! | TATATTATGATGGAGAAAAC+TGG | + | chr4_1:70553313-70553332 | Msa0568910:intron | 25.0% |
| !! | ATATTATGATGGAGAAAACT+GGG | + | chr4_1:70553314-70553333 | Msa0568910:intron | 25.0% |
| !! | TTCCTTTCAAGTTTCAAAGA+AGG | + | chr4_1:70547161-70547180 | Msa0568910:CDS | 30.0% |
| !! | TACCTTCTTTGAAACTTGAA+AGG | - | chr4_1:70547166-70547185 | None:intergenic | 30.0% |
| GGACAGTCAGTTAAAAATAT+TGG | + | chr4_1:70547232-70547251 | Msa0568910:intron | 30.0% | |
| CTATATGAAAATACTGGAGT+TGG | - | chr4_1:70547268-70547287 | None:intergenic | 30.0% | |
| AGAAACAAATATATGGGTCA+CGG | + | chr4_1:70547900-70547919 | Msa0568910:intron | 30.0% | |
| ATTAGTGTAAGTAGAATTGG+AGG | - | chr4_1:70548594-70548613 | None:intergenic | 30.0% | |
| ! | AATCAAGTTGTATACGTGTT+CGG | + | chr4_1:70548783-70548802 | Msa0568910:intron | 30.0% |
| TAATACTCATCCATTTGTCT+TGG | + | chr4_1:70548893-70548912 | Msa0568910:intron | 30.0% | |
| ! | AAAGTTTCATGCCACATTTT+CGG | - | chr4_1:70548998-70549017 | None:intergenic | 30.0% |
| ! | GGCTGTTAGAAATTCTAAAA+CGG | + | chr4_1:70549033-70549052 | Msa0568910:intron | 30.0% |
| GGATCAACTCAAACAAAAAA+TGG | + | chr4_1:70549213-70549232 | Msa0568910:intron | 30.0% | |
| ! | TTTAGTTTCAACCGGTAAAA+TGG | - | chr4_1:70549301-70549320 | None:intergenic | 30.0% |
| !! | GATGACCATTTTTCATACTT+CGG | - | chr4_1:70549327-70549346 | None:intergenic | 30.0% |
| ! | TTGGGAAAGGTATACAATTA+AGG | + | chr4_1:70549350-70549369 | Msa0568910:intron | 30.0% |
| ! | TGGGAAAGGTATACAATTAA+GGG | + | chr4_1:70549351-70549370 | Msa0568910:intron | 30.0% |
| ! | CTGGTTATACTACATGATTT+TGG | - | chr4_1:70549419-70549438 | None:intergenic | 30.0% |
| ! | AGAAATCATTGAAGTACTTC+TGG | - | chr4_1:70549438-70549457 | None:intergenic | 30.0% |
| GATTTCAACCACTCTAAATT+TGG | - | chr4_1:70549474-70549493 | None:intergenic | 30.0% | |
| TGAAAAAGTAAGGATACTGA+AGG | - | chr4_1:70549593-70549612 | None:intergenic | 30.0% | |
| TGGACATAGAAAACAATTGA+TGG | + | chr4_1:70549662-70549681 | Msa0568910:intron | 30.0% | |
| CAATTGATGGAATCTAATTG+AGG | + | chr4_1:70549675-70549694 | Msa0568910:intron | 30.0% | |
| TTAAAAAATAGAGACGCAAG+TGG | - | chr4_1:70549708-70549727 | None:intergenic | 30.0% | |
| !! | TGTATTCTGCAATTGATTTG+TGG | - | chr4_1:70549806-70549825 | None:intergenic | 30.0% |
| CAAATCAATTGCAGAATACA+AGG | + | chr4_1:70549806-70549825 | Msa0568910:intron | 30.0% | |
| GCTAAGTGGAAAATAATTTC+AGG | + | chr4_1:70549835-70549854 | Msa0568910:intron | 30.0% | |
| TGCATAATAGAAGAGATAGA+AGG | - | chr4_1:70549905-70549924 | None:intergenic | 30.0% | |
| AAAACCAGGTAAACTAAAGT+TGG | - | chr4_1:70549945-70549964 | None:intergenic | 30.0% | |
| TAAGGTTCAACCAATTTAGA+CGG | - | chr4_1:70549972-70549991 | None:intergenic | 30.0% | |
| AAATTGGTTGAACCTTAAAC+CGG | + | chr4_1:70549975-70549994 | Msa0568910:intron | 30.0% | |
| TGATTGTGAGGTTCTTATAT+TGG | - | chr4_1:70550115-70550134 | None:intergenic | 30.0% | |
| ! | GTTGATAGGTAAAACTTGAT+AGG | - | chr4_1:70550176-70550195 | None:intergenic | 30.0% |
| ! | ATCAAGTTTTACCTATCAAC+CGG | + | chr4_1:70550176-70550195 | Msa0568910:intron | 30.0% |
| !! | GTATCAATTTCAAGTTGACT+CGG | - | chr4_1:70550499-70550518 | None:intergenic | 30.0% |
| TTAACTCAATTCGACAAGTT+AGG | - | chr4_1:70550521-70550540 | None:intergenic | 30.0% | |
| TAAAGAAAATTGTAGCAGCT+TGG | - | chr4_1:70550557-70550576 | None:intergenic | 30.0% | |
| ! | GCATTTTATATTCCTCTATC+AGG | - | chr4_1:70550609-70550628 | None:intergenic | 30.0% |
| AATAAGTACACTGCCTAAAA+GGG | - | chr4_1:70550740-70550759 | None:intergenic | 30.0% | |
| AAATAAGTACACTGCCTAAA+AGG | - | chr4_1:70550741-70550760 | None:intergenic | 30.0% | |
| !! | TGGAGCATATATGTTTTGAA+TGG | - | chr4_1:70550800-70550819 | None:intergenic | 30.0% |
| !!! | ATGTTTTAAAACTTGGATGG+AGG | + | chr4_1:70550933-70550952 | Msa0568910:intron | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | chr4_1:70551149-70551168 | Msa0568910:intron | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | chr4_1:70551150-70551169 | Msa0568910:intron | 30.0% |
| AGAAAATGAGTCAGTTATTC+CGG | + | chr4_1:70551185-70551204 | Msa0568910:intron | 30.0% | |
| GAAACTTAAAGGATCACTTT+GGG | - | chr4_1:70551420-70551439 | None:intergenic | 30.0% | |
| TGAAACTTAAAGGATCACTT+TGG | - | chr4_1:70551421-70551440 | None:intergenic | 30.0% | |
| !!! | TTGGGACTTTTGAAACTTAA+AGG | - | chr4_1:70551719-70551738 | None:intergenic | 30.0% |
| !!! | TTGGGACTTTTGAAACTTAA+AGG | - | chr4_1:70551719-70551738 | None:intergenic | 30.0% |
| !!! | TTTTTAGGTATGACAAATGG+TGG | - | chr4_1:70551572-70551591 | None:intergenic | 30.0% |
| !! | GTTTTTCGTTTTTCCCAAAA+TGG | - | chr4_1:70551746-70551765 | None:intergenic | 30.0% |
| GGGAAAAACGAAAAACTTAA+AGG | + | chr4_1:70551750-70551769 | Msa0568910:intron | 30.0% | |
| GGAACGAAAATAATTTCTGA+AGG | + | chr4_1:70552244-70552263 | Msa0568910:intron | 30.0% | |
| !!! | AGAAGTGTCTTTTTCCTTAA+AGG | + | chr4_1:70552362-70552381 | Msa0568910:intron | 30.0% |
| !! | GAAGTGTCTTTTTCCTTAAA+GGG | + | chr4_1:70552363-70552382 | Msa0568910:intron | 30.0% |
| !!! | TTTTTCCTTAAAGGGCATTT+TGG | + | chr4_1:70552371-70552390 | Msa0568910:intron | 30.0% |
| GAAAATAAAAGTGGGTGAAA+TGG | - | chr4_1:70552509-70552528 | None:intergenic | 30.0% | |
| TTGGGGAAGAAAATAAAAGT+GGG | - | chr4_1:70552517-70552536 | None:intergenic | 30.0% | |
| TTTGGGGAAGAAAATAAAAG+TGG | - | chr4_1:70552518-70552537 | None:intergenic | 30.0% | |
| ! | TGTGTTTGCATGCTAATTTT+GGG | - | chr4_1:70552535-70552554 | None:intergenic | 30.0% |
| TCTTTCAAAATTACCAATGG+AGG | - | chr4_1:70552673-70552692 | None:intergenic | 30.0% | |
| TAGTTACATGAGTAACATGA+GGG | + | chr4_1:70552707-70552726 | Msa0568910:intron | 30.0% | |
| AGTTAAGCATGAATGGTTAT+TGG | + | chr4_1:70552814-70552833 | Msa0568910:intron | 30.0% | |
| GTTAAGCATGAATGGTTATT+GGG | + | chr4_1:70552815-70552834 | Msa0568910:intron | 30.0% | |
| TTAAGCATGAATGGTTATTG+GGG | + | chr4_1:70552816-70552835 | Msa0568910:intron | 30.0% | |
| !! | TGGGGTTTGTTAATTGTTTA+AGG | + | chr4_1:70552834-70552853 | Msa0568910:intron | 30.0% |
| ! | TTTAAGGTTAAGCTACTACA+TGG | + | chr4_1:70552850-70552869 | Msa0568910:intron | 30.0% |
| TGATTTGATGCTTAGAATCA+AGG | + | chr4_1:70552911-70552930 | Msa0568910:intron | 30.0% | |
| GATTTGATGCTTAGAATCAA+GGG | + | chr4_1:70552912-70552931 | Msa0568910:intron | 30.0% | |
| TTGAAAGAATTCAGAAGTCT+AGG | + | chr4_1:70552990-70553009 | Msa0568910:intron | 30.0% | |
| TTTCAGCTTGAATTTGATAG+TGG | + | chr4_1:70553023-70553042 | Msa0568910:intron | 30.0% | |
| !! | AACTGTTATTGTGGTGTTAT+GGG | + | chr4_1:70553086-70553105 | Msa0568910:intron | 30.0% |
| GTATTGTTGTCGAAATTGAT+TGG | + | chr4_1:70553112-70553131 | Msa0568910:intron | 30.0% | |
| TGGTATGACTAGAATAGTTA+TGG | + | chr4_1:70553132-70553151 | Msa0568910:intron | 30.0% | |
| ! | ACTGCCATAAATTTTTGTAC+AGG | + | chr4_1:70553208-70553227 | Msa0568910:intron | 30.0% |
| !!! | GTACAGGATTCGTTTTTTAA+TGG | + | chr4_1:70553224-70553243 | Msa0568910:intron | 30.0% |
| GACTTGAACCATTTGAAAAT+AGG | + | chr4_1:70553247-70553266 | Msa0568910:intron | 30.0% | |
| AAAATCTGCACTAATGTAGT+TGG | + | chr4_1:70553360-70553379 | Msa0568910:intron | 30.0% | |
| TTTATCGCCAACATTACTCT+CGG | - | chr4_1:70547098-70547117 | None:intergenic | 35.0% | |
| TCAAAGAAGGTAGTTTCCTT+TGG | + | chr4_1:70547174-70547193 | Msa0568910:intron | 35.0% | |
| ATTGCAAATGATACGACCAA+AGG | - | chr4_1:70547193-70547212 | None:intergenic | 35.0% | |
| TACATCTAACGTCGTTTATG+AGG | + | chr4_1:70547375-70547394 | Msa0568910:intron | 35.0% | |
| GCAAGGCAATATGAATTGAA+TGG | + | chr4_1:70547856-70547875 | Msa0568910:intron | 35.0% | |
| ACAATACGACGACAACAATA+AGG | + | chr4_1:70548059-70548078 | Msa0568910:intron | 35.0% | |
| TTAGGGTTGTATGATCGTAT+GGG | - | chr4_1:70548264-70548283 | None:intergenic | 35.0% | |
| ATTAGGGTTGTATGATCGTA+TGG | - | chr4_1:70548265-70548284 | None:intergenic | 35.0% | |
| GATTGCATCTAACATGCTTT+AGG | - | chr4_1:70548311-70548330 | None:intergenic | 35.0% | |
| !! | TTTTGGAAAAGAGGAGAACA+AGG | - | chr4_1:70548462-70548481 | None:intergenic | 35.0% |
| ! | TTCTCCTCTTTTCCAAAAAG+CGG | + | chr4_1:70548464-70548483 | Msa0568910:intron | 35.0% |
| !!! | TAAACCGCTTTTTGGAAAAG+AGG | - | chr4_1:70548471-70548490 | None:intergenic | 35.0% |
| ! | ATCAAGTTGTATACGTGTTC+GGG | + | chr4_1:70548784-70548803 | Msa0568910:intron | 35.0% |
| TATGTTGCACTCTTGCATTA+AGG | - | chr4_1:70548870-70548889 | None:intergenic | 35.0% | |
| TAGCATAGTACCAAGACAAA+TGG | - | chr4_1:70548906-70548925 | None:intergenic | 35.0% | |
| TTTGTCTTGGTACTATGCTA+AGG | + | chr4_1:70548906-70548925 | Msa0568910:intron | 35.0% | |
| GCTAAGGCAAAGGAAAAAAA+AGG | + | chr4_1:70548922-70548941 | Msa0568910:intron | 35.0% | |
| TCAAAGATCAACCGAAAATG+TGG | + | chr4_1:70548984-70549003 | Msa0568910:intron | 35.0% | |
| !! | AATTCTAAAACGGTTGCCAA+TGG | + | chr4_1:70549043-70549062 | Msa0568910:intron | 35.0% |
| AACCGTATATGAGCTGATAA+GGG | - | chr4_1:70549075-70549094 | None:intergenic | 35.0% | |
| TAACCGTATATGAGCTGATA+AGG | - | chr4_1:70549076-70549095 | None:intergenic | 35.0% | |
| ACTACCATTAGAGATTGATG+TGG | + | chr4_1:70549105-70549124 | Msa0568910:intron | 35.0% | |
| !! | TAATTGTGACTTGCTTGTGT+AGG | - | chr4_1:70549245-70549264 | None:intergenic | 35.0% |
| ! | GGTTTGGATAACCATTTTAC+CGG | + | chr4_1:70549287-70549306 | Msa0568910:intron | 35.0% |
| AAGCTCCGAAGTATGAAAAA+TGG | + | chr4_1:70549319-70549338 | Msa0568910:intron | 35.0% | |
| AATGGTCATCAATTTGGGAA+AGG | + | chr4_1:70549337-70549356 | Msa0568910:intron | 35.0% | |
| ! | GAAAGGTATACAATTAAGGG+TGG | + | chr4_1:70549354-70549373 | Msa0568910:intron | 35.0% |
| ACAATTAAGGGTGGCAAAAT+AGG | + | chr4_1:70549363-70549382 | Msa0568910:intron | 35.0% | |
| !! | ATGATTTTGGTCGGTTAAAC+GGG | - | chr4_1:70549406-70549425 | None:intergenic | 35.0% |
| !! | CATGATTTTGGTCGGTTAAA+CGG | - | chr4_1:70549407-70549426 | None:intergenic | 35.0% |
| AAGTCCAGATGGAATCTAAT+TGG | + | chr4_1:70549642-70549661 | Msa0568910:intron | 35.0% | |
| ATGTCCAATTAGATTCCATC+TGG | - | chr4_1:70549649-70549668 | None:intergenic | 35.0% | |
| TTGATGGAATCTAATTGAGG+AGG | + | chr4_1:70549678-70549697 | Msa0568910:intron | 35.0% | |
| TGATGGAATCTAATTGAGGA+GGG | + | chr4_1:70549679-70549698 | Msa0568910:intron | 35.0% | |
| ATACAAGGAATCTTGCTAAG+TGG | + | chr4_1:70549821-70549840 | Msa0568910:intron | 35.0% | |
| ATTTAGACGGAAAGAAAACC+AGG | - | chr4_1:70549959-70549978 | None:intergenic | 35.0% | |
| ! | GGTTTTCTTTCCGTCTAAAT+TGG | + | chr4_1:70549959-70549978 | Msa0568910:intron | 35.0% |
| ! | ATGTAGTAAAGACCGGTTTA+AGG | - | chr4_1:70549990-70550009 | None:intergenic | 35.0% |
| AACCACAATGTAGTAAAGAC+CGG | - | chr4_1:70549997-70550016 | None:intergenic | 35.0% | |
| TTACCAAGACTTCAATGTCA+TGG | - | chr4_1:70550045-70550064 | None:intergenic | 35.0% | |
| AGGTTCTTATATTGGAAGCT+GGG | - | chr4_1:70550107-70550126 | None:intergenic | 35.0% | |
| AGGCCATTACAGACAAATTA+TGG | - | chr4_1:70550581-70550600 | None:intergenic | 35.0% | |
| ! | TGTTGCAACATTACCCTTTT+AGG | + | chr4_1:70550724-70550743 | Msa0568910:intron | 35.0% |
| AGGCAGTGTACTTATTTGAT+TGG | + | chr4_1:70550744-70550763 | Msa0568910:intron | 35.0% | |
| TTGATTGGAAACTGATTAGG+TGG | + | chr4_1:70550759-70550778 | Msa0568910:intron | 35.0% | |
| AACATATATGCTCCATTGAC+TGG | + | chr4_1:70550805-70550824 | Msa0568910:intron | 35.0% | |
| !!! | TTTTAAAACTTGGATGGAGG+TGG | + | chr4_1:70550936-70550955 | Msa0568910:intron | 35.0% |
| TGTCAATTAAATTGGGACAG+AGG | - | chr4_1:70550995-70551014 | None:intergenic | 35.0% | |
| GAAAATGAGTCAGTTATTCC+GGG | + | chr4_1:70551186-70551205 | Msa0568910:intron | 35.0% | |
| !! | CAAGTCATTTTAGAGGATGA+TGG | + | chr4_1:70551512-70551531 | Msa0568910:intron | 35.0% |
| CCTATTGTAGATAGCATAGT+TGG | - | chr4_1:70551662-70551681 | None:intergenic | 35.0% | |
| CCAACTATGCTATCTACAAT+AGG | + | chr4_1:70551659-70551678 | Msa0568910:intron | 35.0% | |
| GGTGAGATTTATTGATGCAA+TGG | - | chr4_1:70552092-70552111 | None:intergenic | 35.0% | |
| GTCGTATCAGATGAATATGT+CGG | + | chr4_1:70552223-70552242 | Msa0568910:intron | 35.0% | |
| AATGACCAAAATGCCCTTTA+AGG | - | chr4_1:70552379-70552398 | None:intergenic | 35.0% | |
| !!! | AAAGGGCATTTTGGTCATTT+AGG | + | chr4_1:70552380-70552399 | Msa0568910:intron | 35.0% |
| !! | GAAAAGAGAGTGTCAAATGA+AGG | - | chr4_1:70552420-70552439 | None:intergenic | 35.0% |
| ! | GTGTTTGCATGCTAATTTTG+GGG | - | chr4_1:70552534-70552553 | None:intergenic | 35.0% |
| ! | GTGTGTTTGCATGCTAATTT+TGG | - | chr4_1:70552536-70552555 | None:intergenic | 35.0% |
| ! | TAATATGCTAGCTTGATCCT+TGG | + | chr4_1:70552582-70552601 | Msa0568910:intron | 35.0% |
| ! | AGTAAACTTGTTCAAGACCA+AGG | - | chr4_1:70552602-70552621 | None:intergenic | 35.0% |
| GTAGTTACATGAGTAACATG+AGG | + | chr4_1:70552706-70552725 | Msa0568910:intron | 35.0% | |
| AACATCCAACCTTCTATCTT+AGG | - | chr4_1:70552761-70552780 | None:intergenic | 35.0% | |
| AAGAGGTAGTTAAGCATGAA+TGG | + | chr4_1:70552807-70552826 | Msa0568910:intron | 35.0% | |
| ! | GAACTGTTATTGTGGTGTTA+TGG | + | chr4_1:70553085-70553104 | Msa0568910:intron | 35.0% |
| GGCAAAATTTGACACGAAAA+AGG | + | chr4_1:70553268-70553287 | Msa0568910:intron | 35.0% | |
| ATTTGACACGAAAAAGGCTT+TGG | + | chr4_1:70553274-70553293 | Msa0568910:intron | 35.0% | |
| ATAATAATCGGTCCAGTGAT+CGG | + | chr4_1:70553395-70553414 | Msa0568910:intron | 35.0% | |
| TAGCTTATCTCTAACACCCT+CGG | + | chr4_1:70547129-70547148 | Msa0568910:CDS | 40.0% | |
| AAAGGAATTCTCATGTCCGA+GGG | - | chr4_1:70547148-70547167 | None:intergenic | 40.0% | |
| TATCTTCAACCCTTCTCTTG+AGG | - | chr4_1:70547320-70547339 | None:intergenic | 40.0% | |
| TCTTATGAGCTGACGATCTT+TGG | - | chr4_1:70547546-70547565 | None:intergenic | 40.0% | |
| !! | AACAATAAGGAGTATCACGC+AGG | + | chr4_1:70548072-70548091 | Msa0568910:intron | 40.0% |
| ATGATCGTATGGGTAGTGAA+GGG | - | chr4_1:70548254-70548273 | None:intergenic | 40.0% | |
| TATGATCGTATGGGTAGTGA+AGG | - | chr4_1:70548255-70548274 | None:intergenic | 40.0% | |
| !! | TGTCGGTTCTGATGGTTTAT+GGG | - | chr4_1:70548812-70548831 | None:intergenic | 40.0% |
| !! | TTGTCGGTTCTGATGGTTTA+TGG | - | chr4_1:70548813-70548832 | None:intergenic | 40.0% |
| !!! | TTCTCTTTTGTCGGTTCTGA+TGG | - | chr4_1:70548820-70548839 | None:intergenic | 40.0% |
| TTGGTACTATGCTAAGGCAA+AGG | + | chr4_1:70548912-70548931 | Msa0568910:intron | 40.0% | |
| CTGATAAGGGGTAAAACCAT+TGG | - | chr4_1:70549062-70549081 | None:intergenic | 40.0% | |
| ACCCCTTATCAGCTCATATA+CGG | + | chr4_1:70549070-70549089 | Msa0568910:intron | 40.0% | |
| ACCGTATATGAGCTGATAAG+GGG | - | chr4_1:70549074-70549093 | None:intergenic | 40.0% | |
| GACACCACATCAATCTCTAA+TGG | - | chr4_1:70549112-70549131 | None:intergenic | 40.0% | |
| !! | GAAATTTGTTAAGGGCGACT+TGG | + | chr4_1:70549266-70549285 | Msa0568910:intron | 40.0% |
| ! | TTCGGAGCTTTAGTTTCAAC+CGG | - | chr4_1:70549309-70549328 | None:intergenic | 40.0% |
| ATTCCATCTGGACTTAAGAG+AGG | - | chr4_1:70549637-70549656 | None:intergenic | 40.0% | |
| ! | GCATCCAACTTTAGTTTACC+TGG | + | chr4_1:70549938-70549957 | Msa0568910:intron | 40.0% |
| AACCGGTCTTTACTACATTG+TGG | + | chr4_1:70549992-70550011 | Msa0568910:intron | 40.0% | |
| GAACCATGACATTGAAGTCT+TGG | + | chr4_1:70550039-70550058 | Msa0568910:intron | 40.0% | |
| TTATATTGGAAGCTGGGAAC+TGG | - | chr4_1:70550101-70550120 | None:intergenic | 40.0% | |
| GAGGTTCTTATATTGGAAGC+TGG | - | chr4_1:70550108-70550127 | None:intergenic | 40.0% | |
| !!! | TTTTGACAGCGTTGATTGTG+AGG | - | chr4_1:70550127-70550146 | None:intergenic | 40.0% |
| ! | ACTCTAGTTTACCGGTTGAT+AGG | - | chr4_1:70550190-70550209 | None:intergenic | 40.0% |
| AAATCAAAATTCAGCCGCCA+GGG | + | chr4_1:70550642-70550661 | Msa0568910:intron | 40.0% | |
| CTCATCTTTGGTACCAAATC+TGG | - | chr4_1:70551623-70551642 | None:intergenic | 40.0% | |
| TGGTACCAAAGATGAGTTCA+AGG | + | chr4_1:70551627-70551646 | Msa0568910:intron | 40.0% | |
| TGCTTCCTTGAACTCATCTT+TGG | - | chr4_1:70551635-70551654 | None:intergenic | 40.0% | |
| CATGGGTCAAATGCATCTAA+AGG | - | chr4_1:70551777-70551796 | None:intergenic | 40.0% | |
| !!! | CAGCTCGCTATTTTTGACAT+GGG | - | chr4_1:70551794-70551813 | None:intergenic | 40.0% |
| TGTTATCACAAGGACCTTCT+TGG | - | chr4_1:70552558-70552577 | None:intergenic | 40.0% | |
| ATTACCAATGGAGGAAGAGA+GGG | - | chr4_1:70552664-70552683 | None:intergenic | 40.0% | |
| AATTACCAATGGAGGAAGAG+AGG | - | chr4_1:70552665-70552684 | None:intergenic | 40.0% | |
| AGGGTTATACTTGTGACTAG+CGG | + | chr4_1:70552726-70552745 | Msa0568910:intron | 40.0% | |
| !! | CAAGATTGGCCTAAGATAGA+AGG | + | chr4_1:70552749-70552768 | Msa0568910:intron | 40.0% |
| ! | ATTGGCCTAAGATAGAAGGT+TGG | + | chr4_1:70552753-70552772 | Msa0568910:intron | 40.0% |
| ATGGACGTTAATGTTTGAGC+TGG | + | chr4_1:70552869-70552888 | Msa0568910:intron | 40.0% | |
| ACGTTAATGTTTGAGCTGGT+TGG | + | chr4_1:70552873-70552892 | Msa0568910:intron | 40.0% | |
| CTTCTCAAATCCAACATCCA+CGG | - | chr4_1:70552968-70552987 | None:intergenic | 40.0% | |
| AATTCGTATGGACCTGTTGT+TGG | + | chr4_1:70553181-70553200 | Msa0568910:intron | 40.0% | |
| ! | ATGGCAGTTTTACCAACAAC+AGG | - | chr4_1:70553196-70553215 | None:intergenic | 40.0% |
| !! | ACACGAAAAAGGCTTTGGAA+TGG | + | chr4_1:70553279-70553298 | Msa0568910:intron | 40.0% |
| !! | CACGAAAAAGGCTTTGGAAT+GGG | + | chr4_1:70553280-70553299 | Msa0568910:intron | 40.0% |
| AACAGAGACAAGAAGCTTGA+AGG | + | chr4_1:70553450-70553469 | Msa0568910:CDS | 40.0% | |
| !! | TGGAGCATTGTTGAAACAAG+TGG | + | chr4_1:70553486-70553505 | Msa0568910:CDS | 40.0% |
| GAAACAAGTGGAATCTTCCT+TGG | + | chr4_1:70553498-70553517 | Msa0568910:CDS | 40.0% | |
| ATACATGCACTTCCATTGAG+TGG | - | chr4_1:70553529-70553548 | None:intergenic | 40.0% | |
| ATGGGAAGATATGTGCACGA+AGG | + | chr4_1:70547061-70547080 | Msa0568910:CDS | 45.0% | |
| TGGGAAGATATGTGCACGAA+GGG | + | chr4_1:70547062-70547081 | Msa0568910:CDS | 45.0% | |
| AAGATATGTGCACGAAGGGA+AGG | + | chr4_1:70547066-70547085 | Msa0568910:CDS | 45.0% | |
| GCGATATCCGAGAGTAATGT+TGG | + | chr4_1:70547088-70547107 | Msa0568910:CDS | 45.0% | |
| !! | GAGGGTGTTAGAGATAAGCT+AGG | - | chr4_1:70547130-70547149 | None:intergenic | 45.0% |
| GAAAGGAATTCTCATGTCCG+AGG | - | chr4_1:70547149-70547168 | None:intergenic | 45.0% | |
| TCGTGAGTTACCTCAAGAGA+AGG | + | chr4_1:70547307-70547326 | Msa0568910:intron | 45.0% | |
| CGTGAGTTACCTCAAGAGAA+GGG | + | chr4_1:70547308-70547327 | Msa0568910:intron | 45.0% | |
| ACAAATATATGGGTCACGGC+TGG | + | chr4_1:70547904-70547923 | Msa0568910:intron | 45.0% | |
| GAACAAGGAGAGAAGAGAAG+AGG | - | chr4_1:70548447-70548466 | None:intergenic | 45.0% | |
| ! | AGGGCGTTACAACAAGTGAA+TGG | + | chr4_1:70548733-70548752 | Msa0568910:intron | 45.0% |
| !! | TGTTTGAGTTGATCCTCGTC+AGG | - | chr4_1:70549208-70549227 | None:intergenic | 45.0% |
| !! | TGACTTGCTTGTGTAGGTTG+TGG | - | chr4_1:70549239-70549258 | None:intergenic | 45.0% |
| !! | TTGTTAAGGGCGACTTGGTT+TGG | + | chr4_1:70549271-70549290 | Msa0568910:intron | 45.0% |
| TGTCCTCTCTTAAGTCCAGA+TGG | + | chr4_1:70549631-70549650 | Msa0568910:intron | 45.0% | |
| TATTCCTCTATCAGGGAAGC+AGG | - | chr4_1:70550601-70550620 | None:intergenic | 45.0% | |
| CAAATCAAAATTCAGCCGCC+AGG | + | chr4_1:70550641-70550660 | Msa0568910:intron | 45.0% | |
| AATCAAAATTCAGCCGCCAG+GGG | + | chr4_1:70550643-70550662 | Msa0568910:intron | 45.0% | |
| ! | AGAGTGTGGTTAGTCACTGA+TGG | + | chr4_1:70550667-70550686 | Msa0568910:intron | 45.0% |
| GGCGTACTTTATCCAGTCAA+TGG | - | chr4_1:70550820-70550839 | None:intergenic | 45.0% | |
| !! | CTGGAGTGTTGTAACTAGCT+AGG | - | chr4_1:70550882-70550901 | None:intergenic | 45.0% |
| AGCTAGTTACAACACTCCAG+TGG | + | chr4_1:70550882-70550901 | Msa0568910:intron | 45.0% | |
| AAGGTCATGTGATGAACCAC+TGG | - | chr4_1:70550901-70550920 | None:intergenic | 45.0% | |
| AAAACTTGGATGGAGGTGGT+TGG | + | chr4_1:70550940-70550959 | Msa0568910:intron | 45.0% | |
| AAACTTGGATGGAGGTGGTT+GGG | + | chr4_1:70550941-70550960 | Msa0568910:intron | 45.0% | |
| ATGAGTCAGTTATTCCGGGA+CGG | + | chr4_1:70551190-70551209 | Msa0568910:intron | 45.0% | |
| AAATAATACTCCCTCCGTCC+CGG | - | chr4_1:70551207-70551226 | None:intergenic | 45.0% | |
| !!! | GCAGCTCGCTATTTTTGACA+TGG | - | chr4_1:70551795-70551814 | None:intergenic | 45.0% |
| AATTCTACAGTGCACTGCAC+AGG | + | chr4_1:70552023-70552042 | Msa0568910:intron | 45.0% | |
| !! | TCGGTTTGGTTTGCTGAAGT+GGG | - | chr4_1:70552444-70552463 | None:intergenic | 45.0% |
| AGAGAAAGAAGAAGGGAGGT+CGG | - | chr4_1:70552463-70552482 | None:intergenic | 45.0% | |
| ACACGGCAGAGAAAGAAGAA+GGG | - | chr4_1:70552470-70552489 | None:intergenic | 45.0% | |
| GGAGAAAGGATGGAAAGACA+CGG | - | chr4_1:70552487-70552506 | None:intergenic | 45.0% | |
| AAGTGGGTGAAATGGGAGAA+AGG | - | chr4_1:70552501-70552520 | None:intergenic | 45.0% | |
| AGCATGCAAACACACCAAGA+AGG | + | chr4_1:70552541-70552560 | Msa0568910:intron | 45.0% | |
| TTACCAATGGAGGAAGAGAG+GGG | - | chr4_1:70552663-70552682 | None:intergenic | 45.0% | |
| TTAGATTGCTGCAGCAAGCT+TGG | + | chr4_1:70552780-70552799 | Msa0568910:intron | 45.0% | |
| !! | GTTATTGTGGTGTTATGGGC+TGG | + | chr4_1:70553090-70553109 | Msa0568910:intron | 45.0% |
| AGAGACAAGAAGCTTGAAGG+AGG | + | chr4_1:70553453-70553472 | Msa0568910:CDS | 45.0% | |
| CAAGAAGCTTGAAGGAGGTT+AGG | + | chr4_1:70553458-70553477 | Msa0568910:CDS | 45.0% | |
| TTGAAGGAGGTTAGGAGAGT+TGG | + | chr4_1:70553466-70553485 | Msa0568910:CDS | 45.0% | |
| TCCTTGGAGAAACCACTCAA+TGG | + | chr4_1:70553514-70553533 | Msa0568910:CDS | 45.0% | |
| TCCATTGAGTGGTTTCTCCA+AGG | - | chr4_1:70553518-70553537 | None:intergenic | 45.0% | |
| !!! | ATTAGTTTTTAATATTTTTT+TGG | + | chr4_1:70551818-70551837 | Msa0568910:intron | 5.0% |
| CATGGCAACAAGAGCTAGCA+AGG | + | chr4_1:70547839-70547858 | Msa0568910:intron | 50.0% | |
| AAGCAGCGTTCTTCGTTCCT+AGG | + | chr4_1:70548403-70548422 | Msa0568910:intron | 50.0% | |
| AGCAGCGTTCTTCGTTCCTA+GGG | + | chr4_1:70548404-70548423 | Msa0568910:intron | 50.0% | |
| GAACTCAGAGAGAGAACCCT+AGG | - | chr4_1:70548423-70548442 | None:intergenic | 50.0% | |
| AGAACTCGACTTTCCTGACG+AGG | + | chr4_1:70549192-70549211 | Msa0568910:intron | 50.0% | |
| GTGGGTGTTAGAGCCAGATT+TGG | + | chr4_1:70551607-70551626 | Msa0568910:intron | 50.0% | |
| !! | GTCGGTTTGGTTTGCTGAAG+TGG | - | chr4_1:70552445-70552464 | None:intergenic | 50.0% |
| AAGAAGAAGGGAGGTCGGTT+TGG | - | chr4_1:70552458-70552477 | None:intergenic | 50.0% | |
| GACACGGCAGAGAAAGAAGA+AGG | - | chr4_1:70552471-70552490 | None:intergenic | 50.0% | |
| GGGTGAAATGGGAGAAAGGA+TGG | - | chr4_1:70552497-70552516 | None:intergenic | 50.0% | |
| TACCAATGGAGGAAGAGAGG+GGG | - | chr4_1:70552662-70552681 | None:intergenic | 50.0% | |
| CTTGTGACTAGCGGCAAGAT+TGG | + | chr4_1:70552735-70552754 | Msa0568910:intron | 50.0% | |
| CAAGAGCTAACCGTGGATGT+TGG | + | chr4_1:70552955-70552974 | Msa0568910:intron | 50.0% | |
| AATCGGTCCAGTGATCGGAT+TGG | + | chr4_1:70553400-70553419 | Msa0568910:intron | 50.0% | |
| GTCAGCTCATAAGACCCGTG+CGG | + | chr4_1:70547552-70547571 | Msa0568910:intron | 55.0% | |
| ATGGCCTGCTTCCCTGATAG+AGG | + | chr4_1:70550594-70550613 | Msa0568910:intron | 55.0% | |
| TAACCACACTCTACCCCTGG+CGG | - | chr4_1:70550659-70550678 | None:intergenic | 55.0% | |
| GACTAACCACACTCTACCCC+TGG | - | chr4_1:70550662-70550681 | None:intergenic | 55.0% | |
| AGTCAGTTATTCCGGGACGG+AGG | + | chr4_1:70551193-70551212 | Msa0568910:intron | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr4_1:70551194-70551213 | Msa0568910:intron | 55.0% | |
| CGGCAGAGAAAGAAGAAGGG+AGG | - | chr4_1:70552467-70552486 | None:intergenic | 55.0% | |
| GCAGCAAGCTTGGAGACAAG+AGG | + | chr4_1:70552790-70552809 | Msa0568910:intron | 55.0% | |
| GCTGAAGCAAGAGCTAACCG+TGG | + | chr4_1:70552948-70552967 | Msa0568910:intron | 55.0% | |
| ! | GGTCCAGTGATCGGATTGGA+CGG | + | chr4_1:70553404-70553423 | Msa0568910:intron | 55.0% |
| AGGGAAGAGGGAGGGAGAAG+AGG | - | chr4_1:70552629-70552648 | None:intergenic | 60.0% | |
| CTTCTCCCTCCCTCTTCCCT+TGG | + | chr4_1:70552629-70552648 | Msa0568910:intron | 60.0% | |
| TTCGGCCAAGGGAAGAGGGA+GGG | - | chr4_1:70552637-70552656 | None:intergenic | 60.0% | |
| GGAGTTCGGCCAAGGGAAGA+GGG | - | chr4_1:70552641-70552660 | None:intergenic | 60.0% | |
| GGAGGAAGAGAGGGGGAGTT+CGG | - | chr4_1:70552655-70552674 | None:intergenic | 60.0% | |
| CTCCCCCTCTCTTCCTCCAT+TGG | + | chr4_1:70552657-70552676 | Msa0568910:intron | 60.0% | |
| CGTCCGTCCAATCCGATCAC+TGG | - | chr4_1:70553410-70553429 | None:intergenic | 60.0% | |
| CATAAGACCCGTGCGGCGCA+CGG | + | chr4_1:70547559-70547578 | Msa0568910:intron | 65.0% | |
| ATAAGACCCGTGCGGCGCAC+GGG | + | chr4_1:70547560-70547579 | Msa0568910:intron | 65.0% | |
| ! | TTGATGACCCGTGCGCCGCA+CGG | - | chr4_1:70547570-70547589 | None:intergenic | 65.0% |
| ATGGGTCACGGCTGGCAGCA+AGG | + | chr4_1:70547912-70547931 | Msa0568910:intron | 65.0% | |
| GTTCGGCCAAGGGAAGAGGG+AGG | - | chr4_1:70552638-70552657 | None:intergenic | 65.0% | |
| GGGAGTTCGGCCAAGGGAAG+AGG | - | chr4_1:70552642-70552661 | None:intergenic | 65.0% | |
| GAGAGGGGGAGTTCGGCCAA+GGG | - | chr4_1:70552648-70552667 | None:intergenic | 65.0% | |
| AGAGAGGGGGAGTTCGGCCA+AGG | - | chr4_1:70552649-70552668 | None:intergenic | 65.0% | |
| TGATGACCCGTGCGCCGCAC+GGG | - | chr4_1:70547569-70547588 | None:intergenic | 70.0% | |
| CAGCCGCCAGGGGTAGAGTG+TGG | + | chr4_1:70550653-70550672 | Msa0568910:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 70547061 | 70553555 | 70547061 | ID=Msa0568910;Name=Msa0568910 |
| chr4_1 | mRNA | 70547061 | 70553555 | 70547061 | ID=Msa0568910-mRNA-1;Parent=Msa0568910;Name=Msa0568910-mRNA-1;_AED=0.94;_eAED=0.94;_QI=0|0|0|0.5|1|1|2|0|88 |
| chr4_1 | exon | 70547061 | 70547182 | 70547061 | ID=Msa0568910-mRNA-1:exon:23808;Parent=Msa0568910-mRNA-1 |
| chr4_1 | exon | 70553411 | 70553555 | 70553411 | ID=Msa0568910-mRNA-1:exon:23809;Parent=Msa0568910-mRNA-1 |
| chr4_1 | CDS | 70547061 | 70547182 | 70547061 | ID=Msa0568910-mRNA-1:cds;Parent=Msa0568910-mRNA-1 |
| chr4_1 | CDS | 70553411 | 70553555 | 70553411 | ID=Msa0568910-mRNA-1:cds;Parent=Msa0568910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
