AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1302190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1302190 MtrunA17_Chr4g0066941 96.491 513 5 3 1 500 1 513 0.0 964
Msa1302190 MtrunA17_Chr2g0286151 67.137 496 126 6 18 500 11 482 0.0 558
Msa1302190 MtrunA17_Chr2g0286151 34.810 158 69 3 270 393 10 167 9.21e-17 82.8
Msa1302190 MtrunA17_Chr1g0195891 52.785 377 127 10 5 367 4 343 2.36e-112 336
Msa1302190 MtrunA17_Chr1g0195891 49.333 75 36 1 320 392 92 166 5.65e-17 82.4
Msa1302190 MtrunA17_Chr7g0249221 44.878 410 175 13 42 441 27 395 5.88e-103 315
Msa1302190 MtrunA17_Chr5g0438891 39.227 362 157 12 42 397 36 340 4.26e-72 234
Msa1302190 MtrunA17_Chr5g0438891 48.780 82 42 0 39 120 75 156 1.17e-19 91.3
Msa1302190 MtrunA17_Chr5g0438891 42.391 92 52 1 28 119 248 338 2.24e-15 78.2
Msa1302190 MtrunA17_Chr3g0116431 35.356 379 157 9 37 394 166 477 2.56e-64 217
Msa1302190 MtrunA17_Chr3g0116431 40.964 83 42 3 320 397 172 252 2.27e-11 66.2
Msa1302190 MtrunA17_Chr4g0058011 37.500 376 153 14 38 396 227 537 5.15e-63 215
Msa1302190 MtrunA17_Chr8g0356241 32.609 368 200 10 42 392 138 474 4.94e-46 167
Msa1302190 MtrunA17_Chr8g0356241 33.898 177 79 4 21 163 167 339 1.52e-26 112
Msa1302190 MtrunA17_Chr8g0356241 35.135 185 73 4 35 173 302 485 1.40e-25 109
Msa1302190 MtrunA17_Chr8g0356241 42.683 82 39 3 320 393 139 220 1.63e-12 69.7
Msa1302190 MtrunA17_Chr1g0195901 57.303 89 35 2 396 484 1 86 2.59e-15 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1302190 AT5G18550.1 51.969 508 183 15 3 493 2 465 4.97e-146 427
Msa1302190 AT5G18550.4 53.669 477 166 14 3 462 2 440 1.97e-144 422
Msa1302190 AT2G47850.1 51.535 456 170 9 20 464 16 431 4.15e-144 422
Msa1302190 AT2G47850.3 51.535 456 170 9 20 464 16 431 4.15e-144 422
Msa1302190 AT5G18550.3 53.680 462 164 13 40 493 14 433 1.86e-141 414
Msa1302190 AT5G18550.2 50.296 507 180 15 3 493 2 452 8.72e-138 405
Msa1302190 AT3G06410.1 56.713 432 138 13 3 415 2 403 1.28e-131 390
Msa1302190 AT2G47850.2 46.711 456 166 10 20 464 16 405 2.79e-119 357
Msa1302190 AT3G02830.1 44.828 377 149 8 41 408 36 362 1.74e-97 300
Msa1302190 AT3G02830.1 42.857 84 47 1 310 392 28 111 7.68e-14 73.6
Msa1302190 AT3G02830.2 44.828 377 149 8 41 408 16 342 2.16e-97 299
Msa1302190 AT3G02830.2 42.857 84 47 1 310 392 8 91 8.04e-14 73.6
Msa1302190 AT2G47850.4 50.578 346 124 8 126 464 4 309 3.87e-94 290
Msa1302190 AT2G47850.4 51.765 85 41 0 79 163 156 240 4.75e-23 100
Msa1302190 AT2G47850.4 39.773 88 44 2 34 116 156 239 7.99e-16 79.3
Msa1302190 AT1G04990.1 37.360 356 152 11 42 392 44 333 2.29e-63 212
Msa1302190 AT1G04990.1 40.833 120 69 2 305 423 73 191 4.45e-21 95.9
Msa1302190 AT1G04990.1 42.683 82 47 0 40 121 85 166 2.95e-17 84.3
Msa1302190 AT1G04990.1 37.273 110 59 3 89 195 260 362 2.89e-12 68.9
Msa1302190 AT1G04990.6 37.360 356 152 11 42 392 44 333 2.29e-63 212
Msa1302190 AT1G04990.6 40.833 120 69 2 305 423 73 191 4.45e-21 95.9
Msa1302190 AT1G04990.6 42.683 82 47 0 40 121 85 166 2.95e-17 84.3
Msa1302190 AT1G04990.6 37.273 110 59 3 89 195 260 362 2.89e-12 68.9
Msa1302190 AT1G04990.2 37.360 356 152 11 42 392 44 333 2.29e-63 212
Msa1302190 AT1G04990.2 40.833 120 69 2 305 423 73 191 4.45e-21 95.9
Msa1302190 AT1G04990.2 42.683 82 47 0 40 121 85 166 2.95e-17 84.3
Msa1302190 AT1G04990.2 37.273 110 59 3 89 195 260 362 2.89e-12 68.9
Msa1302190 AT2G32930.3 32.225 481 229 17 42 494 14 425 2.30e-62 210
Msa1302190 AT2G32930.3 39.286 84 51 0 34 117 50 133 9.46e-16 79.7
Msa1302190 AT2G32930.2 32.225 481 229 17 42 494 41 452 4.17e-62 210
Msa1302190 AT2G32930.2 39.759 83 50 0 34 116 77 159 1.15e-15 79.7
Msa1302190 AT5G63260.1 38.360 378 158 14 42 403 98 416 1.33e-60 205
Msa1302190 AT5G63260.1 38.961 77 46 1 40 115 329 405 1.08e-13 73.6
Msa1302190 AT1G04990.5 36.338 355 137 12 42 392 44 313 4.84e-59 200
Msa1302190 AT1G04990.5 40.833 120 69 2 305 423 73 191 4.00e-21 95.5
Msa1302190 AT1G04990.5 42.683 82 47 0 40 121 85 166 3.73e-17 83.6
Msa1302190 AT2G32930.1 32.017 481 226 18 42 494 41 448 3.40e-58 199
Msa1302190 AT5G16540.1 36.310 336 161 9 23 348 23 315 3.67e-58 197
Msa1302190 AT5G16540.1 53.261 92 41 1 315 404 236 327 4.38e-26 110
Msa1302190 AT5G16540.1 51.948 77 37 0 87 163 240 316 3.87e-19 89.7
Msa1302190 AT5G16540.1 46.667 75 38 1 320 392 85 159 8.66e-17 82.4
Msa1302190 AT5G16540.1 39.394 99 55 2 318 415 38 132 1.12e-12 70.1
Msa1302190 AT5G16540.3 36.310 336 161 9 23 348 2 294 5.80e-58 196
Msa1302190 AT5G16540.3 53.261 92 41 1 315 404 215 306 4.12e-26 109
Msa1302190 AT5G16540.3 51.948 77 37 0 87 163 219 295 4.39e-19 89.0
Msa1302190 AT5G16540.3 46.667 75 38 1 320 392 64 138 9.66e-17 82.0
Msa1302190 AT5G16540.3 39.394 99 55 2 318 415 17 111 1.12e-12 69.7
Msa1302190 AT5G63260.2 36.802 394 158 15 42 403 98 432 3.19e-57 197
Msa1302190 AT5G63260.2 38.961 77 46 1 40 115 345 421 1.20e-13 73.6
Msa1302190 AT5G16540.2 35.777 341 149 11 23 348 23 308 1.56e-55 190
Msa1302190 AT5G16540.2 47.778 90 42 1 315 404 236 320 2.08e-20 93.2
Msa1302190 AT5G16540.2 46.667 75 38 1 320 392 85 159 8.32e-17 82.4
Msa1302190 AT5G16540.2 39.394 99 55 2 318 415 38 132 1.06e-12 70.1
Msa1302190 AT5G16540.4 47.692 195 84 5 23 214 2 181 2.81e-55 186
Msa1302190 AT5G16540.4 33.553 152 92 2 320 469 64 208 3.56e-17 82.0
Msa1302190 AT5G16540.4 60.000 55 20 1 315 367 215 269 2.62e-14 73.6
Msa1302190 AT5G16540.4 39.394 99 55 2 318 415 17 111 6.53e-13 69.3
Msa1302190 AT3G48440.1 35.156 384 167 13 31 391 93 417 3.19e-55 191
Msa1302190 AT3G48440.1 37.500 80 49 1 40 118 341 420 3.20e-13 72.0
Msa1302190 AT3G48440.1 29.508 183 68 5 313 440 101 277 5.22e-13 71.2
Msa1302190 AT1G04990.3 34.219 301 129 10 97 392 16 252 3.54e-41 150
Msa1302190 AT1G04990.3 43.000 100 55 2 325 423 12 110 1.61e-17 84.0
Msa1302190 AT1G04990.3 43.478 69 39 0 53 121 17 85 2.09e-14 74.7
Msa1302190 AT1G04990.3 37.273 110 59 3 89 195 179 281 1.67e-12 68.9
Msa1302190 AT1G04990.4 33.000 300 114 11 97 392 16 232 4.38e-37 139
Msa1302190 AT1G04990.4 43.000 100 55 2 325 423 12 110 1.19e-17 84.0
Msa1302190 AT1G04990.4 43.478 69 39 0 53 121 17 85 2.46e-14 74.3
Msa1302190 AT3G12680.1 41.060 151 61 3 39 163 219 367 1.41e-32 130
Msa1302190 AT3G12680.1 40.331 181 62 6 34 171 329 506 2.59e-28 118
Msa1302190 AT3G12680.1 42.969 128 64 3 42 163 171 295 2.96e-27 115
Msa1302190 AT3G12680.1 32.500 200 74 5 36 174 259 458 3.94e-23 103
Msa1302190 AT3G12680.1 48.810 84 34 1 318 392 416 499 3.46e-19 90.9
Msa1302190 AT3G12680.1 31.250 144 70 3 312 427 258 400 7.40e-16 80.5
Msa1302190 AT3G12680.1 38.614 101 54 3 320 412 172 272 1.07e-13 73.9
Msa1302190 AT3G12680.1 46.575 73 38 1 320 392 223 294 2.21e-13 72.8
Msa1302190 AT1G48195.1 46.250 80 41 1 316 393 3 82 4.78e-19 82.0
Msa1302190 AT1G48195.1 46.053 76 41 0 86 161 5 80 1.01e-16 75.5
Msa1302190 AT1G48195.1 37.662 77 47 1 40 115 4 80 1.89e-11 60.5

Find 228 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAAACTGGTTCGGATTTC+TGG 0.117451 8_3:-64685259 None:intergenic
TCCTGCTGATCAGGCCTTTC+AGG 0.127139 8_3:-64687230 None:intergenic
TCATTTGTCCAGGGCCCTTA+TGG 0.161593 8_3:+64686843 Msa1302190:CDS
AAAACAGGGGACTGTAAATT+TGG 0.217295 8_3:+64687269 Msa1302190:CDS
TGACAAGTAAACTGATAAAA+AGG 0.223297 8_3:-64689468 None:intergenic
GTTGGTTCGACGCAGCTTTA+TGG 0.252629 8_3:+64687044 Msa1302190:CDS
TTGTGATTGGTTTAGGTTAT+TGG 0.258647 8_3:+64685967 Msa1302190:intron
TAAGGGCTCCAGCCTGAAAA+AGG 0.262944 8_3:-64686894 None:intergenic
AGGACGGGATCGTGCAAATT+TGG 0.273979 8_3:+64686374 Msa1302190:CDS
CGGTAAACCTTTCGATATCT+TGG 0.304126 8_3:-64689258 None:intergenic
TTCAGGCTGGAGCCCTTATC+AGG 0.307461 8_3:+64686899 Msa1302190:CDS
ACTCATGGAGGGTCTCAAAT+AGG 0.308129 8_3:+64688891 Msa1302190:three_prime_UTR
GGATGAAGCAGGCTCCTTGC+TGG 0.312902 8_3:-64688640 None:intergenic
CATTTGTCCAGGGCCCTTAT+GGG 0.325235 8_3:+64686844 Msa1302190:CDS
TACCGTGAAGAGAAGTTATC+AGG 0.333179 8_3:+64689276 Msa1302190:three_prime_UTR
GGCTGTACAGTTTGATAAAT+AGG 0.338710 8_3:-64686756 None:intergenic
AATGACTGTTGGACCTGAAC+TGG 0.339111 8_3:-64688932 None:intergenic
ACGGGCTGTCCAACTCGTTC+TGG 0.343305 8_3:-64686015 None:intergenic
GCTGGTCCTTATCAATCTTC+TGG 0.343679 8_3:+64687161 Msa1302190:CDS
ATTGGAGCTGCGAGGATTGC+CGG 0.347654 8_3:+64685985 Msa1302190:CDS
GCTGGTCCTTACCAATCTTC+TGG 0.357551 8_3:+64687131 Msa1302190:CDS
TCTAGGATGGTGATACTTGC+AGG 0.363592 8_3:-64686402 None:intergenic
GCAGGGTATGGTGGATTGGT+TGG 0.368471 8_3:+64685586 Msa1302190:intron
TTGGTTCGACGCAGCTTTAT+GGG 0.368819 8_3:+64687045 Msa1302190:CDS
TGCTGACATTCCTGCTGATC+AGG 0.370843 8_3:-64687239 None:intergenic
TCACCAACAACCGTCTATAC+TGG 0.371079 8_3:+64687083 Msa1302190:CDS
GACATTACCATTGGCCCATA+AGG 0.373452 8_3:-64686858 None:intergenic
CTGATTGTATCTATTATTTG+AGG 0.384105 8_3:+64685644 Msa1302190:CDS
CTGGATCCTGATGCAAGTTC+AGG 0.386934 8_3:-64688621 None:intergenic
AAAAGCAAGTTGCGACTGTA+TGG 0.387335 8_3:-64689049 None:intergenic
GCTCATTGATGATGACATTC+TGG 0.391929 8_3:-64688661 None:intergenic
CAACCATCTTCTCAGAGTTC+CGG 0.392756 8_3:+64688747 Msa1302190:CDS
TGTCAGCATTACATGAAAAC+AGG 0.398214 8_3:+64687254 Msa1302190:CDS
AGTAAAATGCTTGACTTGTT+GGG 0.398533 8_3:+64689363 Msa1302190:three_prime_UTR
AGAAACTGGTTCGGATTTCT+GGG 0.399991 8_3:-64685258 None:intergenic
AAAGTGAACCTTAGTCCTAT+TGG 0.411454 8_3:+64687335 Msa1302190:CDS
TGAATTAACCACCTGGCAAA+CGG 0.411779 8_3:-64686034 None:intergenic
GGTGCTACTTGTGGTGGCAC+TGG 0.412279 8_3:-64688784 None:intergenic
GGTCCCTCAACCGGTCCTTC+AGG 0.414102 8_3:+64687182 Msa1302190:CDS
TCTTGGGAACAATAGCAAAC+AGG 0.414608 8_3:-64689241 None:intergenic
CAATCCTCTGGTCCCTCAGC+TGG 0.414974 8_3:+64687113 Msa1302190:CDS
CAATCTTCTGGTCCCTCAGC+TGG 0.414974 8_3:+64687143 Msa1302190:CDS
TCTACATGGCTCATTTGTCC+AGG 0.415319 8_3:+64686833 Msa1302190:CDS
GCACCGACGGAAGTCCATTC+CGG 0.418324 8_3:-64685452 None:intergenic
AAGAAACTAGAGTGAGAAAC+TGG 0.419904 8_3:-64685272 None:intergenic
AAAACGGGACAATGCAAGTT+TGG 0.420191 8_3:+64686633 Msa1302190:CDS
CCCACAGGATAGGGTGCAAC+TGG 0.421391 8_3:-64688549 None:intergenic
AGAGGTGAAACTTGGGGAAC+TGG 0.421536 8_3:-64686714 None:intergenic
ACCTGAAAGGCCTGATCAGC+AGG 0.421548 8_3:+64687229 Msa1302190:CDS
GCATTGGCAGAGGTGAAACT+TGG 0.425784 8_3:-64686722 None:intergenic
CGATTGACTGTCTTTACTCA+TGG 0.427704 8_3:+64688876 Msa1302190:three_prime_UTR
AGTCCGGGACATACCTGATA+AGG 0.428673 8_3:-64686912 None:intergenic
ATAGGACTAAGGTTCACTTT+TGG 0.429387 8_3:-64687332 None:intergenic
GACTTTGTCAACGGTTGTAC+CGG 0.430550 8_3:+64688707 Msa1302190:CDS
TATCCTGTGGGTTCCGCCAT+TGG 0.430848 8_3:+64688561 Msa1302190:CDS
CAATCTTCTGGTCCCTCAAC+CGG 0.435809 8_3:+64687173 Msa1302190:CDS
AGTTGGACAGCCCGTTTGCC+AGG 0.438645 8_3:+64686023 Msa1302190:CDS
TCAAGCTTTCGTGTGAGATC+AGG 0.441319 8_3:+64689488 Msa1302190:three_prime_UTR
AAGCAGATGGACTGTAACTC+AGG 0.442386 8_3:-64688509 None:intergenic
GGGCGCAAAGGAAGGCCAAT+AGG 0.442531 8_3:-64687350 None:intergenic
GAATTAACCACCTGGCAAAC+GGG 0.443512 8_3:-64686033 None:intergenic
TTGGAGCTGCGAGGATTGCC+GGG 0.449469 8_3:+64685986 Msa1302190:CDS
TGTATCTATTATTTGAGGAC+AGG 0.449948 8_3:+64685649 Msa1302190:CDS
CCCTCAAAACAGAGAATGAA+TGG 0.451293 8_3:-64685318 None:intergenic
GTGTTCCTATTATGTGAAAA+CGG 0.451501 8_3:+64686617 Msa1302190:CDS
AAGTAAAATGCTTGACTTGT+TGG 0.455044 8_3:+64689362 Msa1302190:three_prime_UTR
TGGGCATCTGATTGAGAAAC+CGG 0.455710 8_3:-64688726 None:intergenic
GGGTATGGTGGATTGGTTGG+TGG 0.457920 8_3:+64685589 Msa1302190:intron
AGCACATCGACTGCTTCAGC+TGG 0.458965 8_3:+64688681 Msa1302190:CDS
CCCGTGTCGCTAAATTGTTA+TGG 0.459022 8_3:+64686446 Msa1302190:CDS
GGAAGTACAGGGCTTGCTGC+TGG 0.460193 8_3:-64687002 None:intergenic
CTCCTGATAACTTCTCTTCA+CGG 0.464631 8_3:-64689278 None:intergenic
GCGGTTATGGTTCTAGGTGT+CGG 0.465761 8_3:+64685677 Msa1302190:CDS
GTGGATGGGCATGTGCATAA+TGG 0.466074 8_3:-64689098 None:intergenic
TGTTGCAGGGTATGGTGGAT+TGG 0.467100 8_3:+64685582 Msa1302190:intron
TATGGTGGATTGGTTGGTGG+TGG 0.468504 8_3:+64685592 Msa1302190:CDS
CACCCGCAGGCTGTGGATGA+TGG 0.471640 8_3:-64686671 None:intergenic
ATTTGGCCACCCGCAGGCTG+TGG 0.472332 8_3:-64686678 None:intergenic
CGTACCTTTGTTCCATTGTA+CGG 0.473375 8_3:-64685385 None:intergenic
GGTAAACCTTTCGATATCTT+GGG 0.476022 8_3:-64689257 None:intergenic
CAGCTGAGGGACCAGAAGAT+TGG 0.481828 8_3:-64687142 None:intergenic
ACACTCAACGGAGTACTAGA+AGG 0.482108 8_3:-64687023 None:intergenic
GGTCCTTCACAACAACAATA+TGG 0.484846 8_3:+64686786 Msa1302190:CDS
AACTCGGATGATGAGGATGA+TGG 0.484942 8_3:-64688594 None:intergenic
TATTGGCCTTCCTTTGCGCC+CGG 0.486134 8_3:+64687352 Msa1302190:CDS
TGTTCCTATTATGTGAAAAC+GGG 0.487218 8_3:+64686618 Msa1302190:CDS
TTGAGGCCTGAACTTGCATC+AGG 0.491757 8_3:+64688615 Msa1302190:CDS
ACATTACCATTGGCCCATAA+GGG 0.494713 8_3:-64686857 None:intergenic
GTGAATGTTGCAGGGTATGG+TGG 0.494891 8_3:+64685577 Msa1302190:intron
ACTGGGAGTTGCTAAAGAAC+CGG 0.495795 8_3:-64688766 None:intergenic
AGCTGGCTTGACTTTGTCAA+CGG 0.496678 8_3:+64688698 Msa1302190:CDS
TGAACACAAAGACAATTGAT+TGG 0.497325 8_3:-64688958 None:intergenic
TAGATACAATCAGCTTCATC+AGG 0.499288 8_3:-64685634 None:intergenic
CCTTCGTTTCGTCCGTACAA+TGG 0.504041 8_3:+64685373 Msa1302190:exon
CTACCTGAAGGACCGGTTGA+GGG 0.505161 8_3:-64687185 None:intergenic
ATAGGTGAAGGTACCGGCAT+TGG 0.508949 8_3:-64686738 None:intergenic
GATAAAATGGAGTGATAATG+AGG 0.513137 8_3:-64688844 None:intergenic
CTGGTGATGGTGCTATCATT+TGG 0.515476 8_3:-64686695 None:intergenic
GGAGTACTAGAAGGAAGTAC+AGG 0.516255 8_3:-64687014 None:intergenic
ATATCATCATCCGCCGGACA+TGG 0.516601 8_3:+64687304 Msa1302190:CDS
GCCAGTTGCACCCTATCCTG+TGG 0.516851 8_3:+64688548 Msa1302190:CDS
GAACCGGAACTCTGAGAAGA+TGG 0.517115 8_3:-64688750 None:intergenic
TCTAGTACTCCGTTGAGTGT+TGG 0.517479 8_3:+64687026 Msa1302190:CDS
CGGAACTCTGAGAAGATGGT+TGG 0.517807 8_3:-64688746 None:intergenic
AACAGAGCAGAGAGAAGAGA+AGG 0.518824 8_3:+64685207 Msa1302190:five_prime_UTR
TTCCATCATCCACAGCCTGC+GGG 0.519032 8_3:+64686669 Msa1302190:CDS
GCTATCATTTGGCCACCCGC+AGG 0.521595 8_3:-64686684 None:intergenic
ACTCTGATCCGTCGCCGGAA+TGG 0.523998 8_3:+64685438 Msa1302190:CDS
CAGCTGAGGGACCAGAGGAT+TGG 0.524806 8_3:-64687112 None:intergenic
CCATTGGCCCATAAGGGCCC+TGG 0.526364 8_3:-64686851 None:intergenic
GAAGGTACCGGCATTGGCAG+AGG 0.526800 8_3:-64686732 None:intergenic
CTACATGGCTCATTTGTCCA+GGG 0.527744 8_3:+64686834 Msa1302190:CDS
CTGCAGTACTATGCGAGGAC+GGG 0.528562 8_3:+64686359 Msa1302190:intron
GTGCTACTTGTGGTGGCACT+GGG 0.532061 8_3:-64688783 None:intergenic
GGTCCAGTATAGACGGTTGT+TGG 0.532400 8_3:-64687086 None:intergenic
ACTCGGATGATGAGGATGAT+GGG 0.532572 8_3:-64688593 None:intergenic
CATTGGCAGAGGTGAAACTT+GGG 0.537765 8_3:-64686721 None:intergenic
CAAGTATCACCATCCTAGAC+AGG 0.538523 8_3:+64686406 Msa1302190:CDS
GTCCGGGACATACCTGATAA+GGG 0.540447 8_3:-64686911 None:intergenic
AATGGCGGAACCCACAGGAT+AGG 0.542826 8_3:-64688559 None:intergenic
TGCAACTGGCATATCAGAAA+GGG 0.543825 8_3:-64688535 None:intergenic
GGAACTCTGAGAAGATGGTT+GGG 0.544097 8_3:-64688745 None:intergenic
GCGAGGCCACCTCTTCTACA+TGG 0.546491 8_3:+64686819 Msa1302190:CDS
AACTCGTTCTGGATATTCCC+CGG 0.548050 8_3:-64686004 None:intergenic
ACTGGACCTTACCAATCCTC+TGG 0.549245 8_3:+64687101 Msa1302190:CDS
GTACCAATGGCGGAACCCAC+AGG 0.549531 8_3:-64688564 None:intergenic
GTTGCACTCTGATCCGTCGC+CGG 0.554636 8_3:+64685433 Msa1302190:CDS
CATTCACATTGCTTAGCTTG+AGG 0.554771 8_3:-64688817 None:intergenic
TGCAAGTTTGATCATCCTAC+GGG 0.556067 8_3:+64688483 Msa1302190:CDS
ATATTGTTGTTGTGAAGGAC+CGG 0.556322 8_3:-64686784 None:intergenic
CCAGTTGCACCCTATCCTGT+GGG 0.556861 8_3:+64688549 Msa1302190:CDS
GTGCAACTGGCATATCAGAA+AGG 0.557979 8_3:-64688536 None:intergenic
ACTACCTGAAGGACCGGTTG+AGG 0.558770 8_3:-64687186 None:intergenic
ACTAGAGTGAGAAACTGGTT+CGG 0.558999 8_3:-64685267 None:intergenic
AAGGAAGGCCAATAGGACTA+AGG 0.560421 8_3:-64687343 None:intergenic
GAAACTTGGGGAACTGGTGA+TGG 0.560745 8_3:-64686708 None:intergenic
TTGATTGGTGCAATGACTGT+TGG 0.560870 8_3:-64688943 None:intergenic
CTTGGGAACAATAGCAAACA+GGG 0.563429 8_3:-64689240 None:intergenic
ACGGAAGTCCATTCCGGCGA+CGG 0.563671 8_3:-64685446 None:intergenic
GTATAGACGGTTGTTGGTGA+AGG 0.565761 8_3:-64687080 None:intergenic
GAGGGACCAGAAGATTGATA+AGG 0.567065 8_3:-64687167 None:intergenic
AGTTTCACCTCTGCCAATGC+CGG 0.567846 8_3:+64686725 Msa1302190:CDS
ATTGTTCCCAAGATATCGAA+AGG 0.568206 8_3:+64689251 Msa1302190:three_prime_UTR
TTCCTGCCGCCTGTCTAGGA+TGG 0.568534 8_3:-64686415 None:intergenic
ACTTCCGTCGGTGCTGATGA+AGG 0.569648 8_3:+64685461 Msa1302190:CDS
TTGACTGTCTTTACTCATGG+AGG 0.571021 8_3:+64688879 Msa1302190:three_prime_UTR
GCTGCAGTACTATGCGAGGA+CGG 0.572531 8_3:+64686358 Msa1302190:intron
ATGACTGTTGGACCTGAACT+GGG 0.574035 8_3:-64688931 None:intergenic
AAAGCAAGTTGCGACTGTAT+GGG 0.574997 8_3:-64689048 None:intergenic
TTTATTCAAGATCAAAGAGA+TGG 0.575418 8_3:-64688997 None:intergenic
TGACTGTCTTTACTCATGGA+GGG 0.575436 8_3:+64688880 Msa1302190:three_prime_UTR
GTGCAAGTTTGATCATCCTA+CGG 0.575614 8_3:+64688482 Msa1302190:CDS
ACACCATATTGTTGTTGTGA+AGG 0.575855 8_3:-64686789 None:intergenic
CAAACTGTACAGCCTCCGTC+CGG 0.577193 8_3:+64686765 Msa1302190:CDS
CGCTGGGTATAATGAGTGCA+AGG 0.577555 8_3:-64688435 None:intergenic
CCAGGGCCCTTATGGGCCAA+TGG 0.578875 8_3:+64686851 Msa1302190:CDS
GAGACGACCCATCGTTAGCT+CGG 0.581397 8_3:-64685409 None:intergenic
ATAATCATTACCGGGCGCAA+AGG 0.584792 8_3:-64687362 None:intergenic
CCATTGTACGGACGAAACGA+AGG 0.589644 8_3:-64685373 None:intergenic
TATCATCATCCGCCGGACAT+GGG 0.589789 8_3:+64687305 Msa1302190:CDS
CTCGGATGATGAGGATGATG+GGG 0.590885 8_3:-64688592 None:intergenic
CTGACTACTACCTGAAGGAC+CGG 0.592024 8_3:-64687192 None:intergenic
AGGCCTCAACTCGGATGATG+AGG 0.592496 8_3:-64688601 None:intergenic
TTTACCGCGCCACGGTCACG+TGG 0.593039 8_3:-64685709 None:intergenic
TGCAAGTTCAGGCCTCAACT+CGG 0.595724 8_3:-64688610 None:intergenic
TCCTTCAGGTAGTAGTCAGA+AGG 0.595822 8_3:+64687196 Msa1302190:CDS
CTTTGATCTTGAATAAACCA+TGG 0.599624 8_3:+64689003 Msa1302190:three_prime_UTR
CCATAACAATTTAGCGACAC+GGG 0.599754 8_3:-64686446 None:intergenic
AGATTGATAAGGACCAGCTG+AGG 0.601283 8_3:-64687156 None:intergenic
TCAGAAAGGGAAGAAGCAGA+TGG 0.603283 8_3:-64688522 None:intergenic
CATCCTCATCATCCGAGTTG+AGG 0.603884 8_3:+64688598 Msa1302190:CDS
GATGACATTCTGGATGAAGC+AGG 0.604175 8_3:-64688651 None:intergenic
AGATTGGTAAGGACCAGCTG+AGG 0.604660 8_3:-64687126 None:intergenic
TGATGGGGCAAGAGTACCAA+TGG 0.604718 8_3:-64688577 None:intergenic
ATTCCATCATCCACAGCCTG+CGG 0.605023 8_3:+64686668 Msa1302190:CDS
GGGGAATATCCAGAACGAGT+TGG 0.606813 8_3:+64686006 Msa1302190:CDS
TTTGGTGCACCCATGTCCGG+CGG 0.607060 8_3:-64687314 None:intergenic
TGATAAATAGGTGAAGGTAC+CGG 0.608014 8_3:-64686744 None:intergenic
AAAGTACAAACCACTCGCAA+CGG 0.608625 8_3:-64686473 None:intergenic
AAACTTACAAAATCCACGCT+GGG 0.608759 8_3:-64688451 None:intergenic
TCAGCTTCATCAGGTCGTTG+TGG 0.608955 8_3:-64685625 None:intergenic
GAGGGACCAGAGGATTGGTA+AGG 0.609630 8_3:-64687107 None:intergenic
TGCGTCGAACCAACACTCAA+CGG 0.610522 8_3:-64687035 None:intergenic
AGGTACGGCCGAGCTAACGA+TGG 0.613122 8_3:+64685401 Msa1302190:CDS
ACAAATGAGCCATGTAGAAG+AGG 0.616318 8_3:-64686828 None:intergenic
TTGGTAAGGTCCAGTATAGA+CGG 0.617115 8_3:-64687093 None:intergenic
GGTACGGCCGAGCTAACGAT+GGG 0.619629 8_3:+64685402 Msa1302190:CDS
GAGGGACCAGAAGATTGGTA+AGG 0.620595 8_3:-64687137 None:intergenic
AGCAGATGGACTGTAACTCA+GGG 0.621538 8_3:-64688508 None:intergenic
CATCATCCACAGCCTGCGGG+TGG 0.623790 8_3:+64686672 Msa1302190:CDS
TCCATAACAATTTAGCGACA+CGG 0.624173 8_3:-64686447 None:intergenic
CAAACTTACAAAATCCACGC+TGG 0.625616 8_3:-64688452 None:intergenic
AGTACCTTCATCAGCACCGA+CGG 0.628033 8_3:-64685465 None:intergenic
CCATCCACGTGACCGTGGCG+CGG 0.628156 8_3:+64685705 Msa1302190:CDS
AATGAGCCATGTAGAAGAGG+TGG 0.628441 8_3:-64686825 None:intergenic
TTATGGATATCCGTTGCGAG+TGG 0.629078 8_3:+64686463 Msa1302190:CDS
ACAGAGCAGAGAGAAGAGAA+GGG 0.629461 8_3:+64685208 Msa1302190:five_prime_UTR
AGGAACACTCATTACCTGAA+AGG 0.629964 8_3:+64687216 Msa1302190:CDS
TCCTTCTGACTACTACCTGA+AGG 0.631642 8_3:-64687197 None:intergenic
GATTGATAAGGACCAGCTGA+GGG 0.633302 8_3:-64687155 None:intergenic
ACAGTTTGATAAATAGGTGA+AGG 0.633435 8_3:-64686750 None:intergenic
CATTGTACGGACGAAACGAA+GGG 0.633887 8_3:-64685372 None:intergenic
GTGAGAGACGGTGCTACTTG+TGG 0.638791 8_3:-64688793 None:intergenic
TGGAGCTGCGAGGATTGCCG+GGG 0.640922 8_3:+64685987 Msa1302190:CDS
TTTAACCATCCACGTGACCG+TGG 0.642316 8_3:+64685700 Msa1302190:CDS
GAAACTGGTTCGGATTTCTG+GGG 0.642440 8_3:-64685257 None:intergenic
GTCAGCATTACATGAAAACA+GGG 0.642817 8_3:+64687255 Msa1302190:CDS
GATTGGTAAGGACCAGCTGA+GGG 0.643343 8_3:-64687125 None:intergenic
TTAGCTTGAGGTGTGAGAGA+CGG 0.646603 8_3:-64688805 None:intergenic
AGGACCAGCTGAGGGACCAG+AGG 0.646769 8_3:-64687117 None:intergenic
TGCACTCATTATACCCAGCG+TGG 0.650258 8_3:+64688438 Msa1302190:CDS
TGTTGTTGTGAAGGACCGGA+CGG 0.652804 8_3:-64686780 None:intergenic
ATGTAGATATCATCATCCGC+CGG 0.657903 8_3:+64687298 Msa1302190:CDS
AATATGGTGTACTTGTTGCG+AGG 0.663439 8_3:+64686802 Msa1302190:CDS
TCATGCTGCAGTACTATGCG+AGG 0.670087 8_3:+64686354 Msa1302190:intron
GAGTACTAGAAGGAAGTACA+GGG 0.672699 8_3:-64687013 None:intergenic
CGTACAATGGAACAAAGGTA+CGG 0.672974 8_3:+64685386 Msa1302190:exon
ATTGGCAGAGGTGAAACTTG+GGG 0.673579 8_3:-64686720 None:intergenic
ACTTGCATCAGGATCCAGCA+AGG 0.675326 8_3:+64688626 Msa1302190:CDS
TCGTCCGTACAATGGAACAA+AGG 0.678724 8_3:+64685381 Msa1302190:exon
CTGTAACTCAGGGATCCCGT+AGG 0.679795 8_3:-64688498 None:intergenic
GTATCACCATCCTAGACAGG+CGG 0.680328 8_3:+64686409 Msa1302190:CDS
TTTAGGTTATTGGAGCTGCG+AGG 0.685804 8_3:+64685977 Msa1302190:intron
AGAGACGGTGCTACTTGTGG+TGG 0.702854 8_3:-64688790 None:intergenic
TGTTGTGAAGGACCGGACGG+AGG 0.705461 8_3:-64686777 None:intergenic
TGGGGCAAGAGTACCAATGG+CGG 0.727761 8_3:-64688574 None:intergenic
GTTATCAGGAGACTACAATG+AGG 0.728131 8_3:+64689290 Msa1302190:three_prime_UTR
TCAGCATTACATGAAAACAG+GGG 0.793025 8_3:+64687256 Msa1302190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATTTTTTATTTTTTA+AGG + chr8_3:64685732-64685751 Msa1302190:intron 0.0%
!!! TTATAATGTTTTTTTACTAA+CGG + chr8_3:64685836-64685855 Msa1302190:intron 10.0%
!!! TTATTTTTATGTCATATATT+TGG + chr8_3:64687709-64687728 Msa1302190:intron 10.0%
!!! TTTCACATTTTTTTTTTTTT+CGG - chr8_3:64687858-64687877 None:intergenic 10.0%
!! GTTTAATCAAATTAAAATTT+GGG - chr8_3:64688128-64688147 None:intergenic 10.0%
!!! TTCACATTTTTTTTTTTTTC+GGG - chr8_3:64687857-64687876 None:intergenic 15.0%
!!! TGATGTTTTTTTTTTTTTTG+AGG + chr8_3:64687977-64687996 Msa1302190:intron 15.0%
!!! GATGTTTTTTTTTTTTTTGA+GGG + chr8_3:64687978-64687997 Msa1302190:intron 15.0%
!! CGTTTAATCAAATTAAAATT+TGG - chr8_3:64688129-64688148 None:intergenic 15.0%
!! CAAAAAAAAAAAAAGATTGA+AGG - chr8_3:64689149-64689168 None:intergenic 15.0%
!!! CTTCAATCTTTTTTTTTTTT+TGG + chr8_3:64689147-64689166 Msa1302190:three_prime_UTR 15.0%
!!! TTTTTAAGGTTTTTGTTTTG+AGG + chr8_3:64685746-64685765 Msa1302190:intron 20.0%
!! ATGAATAAAACAAAACACAA+AGG - chr8_3:64685862-64685881 None:intergenic 20.0%
!!! TTTTATTCATTGAATTCTGT+CGG + chr8_3:64685872-64685891 Msa1302190:intron 20.0%
!! GCAAATATAATCAATACAAA+AGG - chr8_3:64686329-64686348 None:intergenic 20.0%
!!! TTTTATGAAAAATCGTAACA+GGG + chr8_3:64686585-64686604 Msa1302190:intron 20.0%
!! GCTATTATTATTATCATCAA+AGG - chr8_3:64687482-64687501 None:intergenic 20.0%
!!! TCACATTTTTTTTTTTTTCG+GGG - chr8_3:64687856-64687875 None:intergenic 20.0%
!! ACTATTGCATTAAAATACAT+CGG - chr8_3:64688024-64688043 None:intergenic 20.0%
!!! TTAATTTGATTAAACGATTG+TGG + chr8_3:64688133-64688152 Msa1302190:intron 20.0%
!! AAAAGATCAATAAAGACAAA+TGG - chr8_3:64688216-64688235 None:intergenic 20.0%
!!! TTTGTCTTTATTGATCTTTT+TGG + chr8_3:64688216-64688235 Msa1302190:intron 20.0%
!!! TTGTTGTATGTTTTATAATC+AGG + chr8_3:64688404-64688423 Msa1302190:intron 20.0%
!!! TGTTGTATGTTTTATAATCA+GGG + chr8_3:64688405-64688424 Msa1302190:intron 20.0%
!! ATCGAAAAATTGAGATAAAA+TGG - chr8_3:64688860-64688879 None:intergenic 20.0%
!!! TTATTATTTTTGATACACCA+TGG + chr8_3:64689330-64689349 Msa1302190:three_prime_UTR 20.0%
! CTGATTGTATCTATTATTTG+AGG + chr8_3:64685644-64685663 Msa1302190:CDS 25.0%
!! AACATGGTGATTGAAATTTT+AGG + chr8_3:64685935-64685954 Msa1302190:intron 25.0%
!! ACATGGTGATTGAAATTTTA+GGG + chr8_3:64685936-64685955 Msa1302190:intron 25.0%
! ATTCAGTTTATGCTCAATTA+TGG + chr8_3:64686052-64686071 Msa1302190:intron 25.0%
! TTCAGTTTATGCTCAATTAT+GGG + chr8_3:64686053-64686072 Msa1302190:intron 25.0%
!! CTTTTATGAAAAATCGTAAC+AGG + chr8_3:64686584-64686603 Msa1302190:intron 25.0%
! ACAAAGTTAAGAAGTCAATT+TGG - chr8_3:64687529-64687548 None:intergenic 25.0%
!! AATTGACTTCTTAACTTTGT+TGG + chr8_3:64687529-64687548 Msa1302190:intron 25.0%
!!! ATTTTTAGTGAACTCTTTTC+TGG + chr8_3:64687676-64687695 Msa1302190:intron 25.0%
!!! TTTTTAGTGAACTCTTTTCT+GGG + chr8_3:64687677-64687696 Msa1302190:intron 25.0%
!!! ACATTTTTTTTTTTTTCGGG+GGG - chr8_3:64687854-64687873 None:intergenic 25.0%
!!! CACATTTTTTTTTTTTTCGG+GGG - chr8_3:64687855-64687874 None:intergenic 25.0%
!! ATCTGAACTTTTAAATCTCT+AGG + chr8_3:64687918-64687937 Msa1302190:intron 25.0%
! AATTACTTGAGCTTGAAAAA+TGG + chr8_3:64688075-64688094 Msa1302190:intron 25.0%
!! TCAAATTAAAATTTGGGACA+AGG - chr8_3:64688122-64688141 None:intergenic 25.0%
! CAAAATAATATGTGGTTTAG+TGG - chr8_3:64688187-64688206 None:intergenic 25.0%
! TTAATGCAATACTTTGTCTT+TGG + chr8_3:64688252-64688271 Msa1302190:intron 25.0%
!! GTGTTCATATAATCTTTTTG+TGG + chr8_3:64688974-64688993 Msa1302190:three_prime_UTR 25.0%
! TTTATTCAAGATCAAAGAGA+TGG - chr8_3:64689000-64689019 None:intergenic 25.0%
!! GTTGCTAAAATTTTCAAAGT+TGG - chr8_3:64689029-64689048 None:intergenic 25.0%
! TTATTCCCAAATGCAAAAAA+GGG - chr8_3:64689198-64689217 None:intergenic 25.0%
! ATTATTCCCAAATGCAAAAA+AGG - chr8_3:64689199-64689218 None:intergenic 25.0%
! GACAAGTAAACTGATAAAAA+GGG - chr8_3:64689470-64689489 None:intergenic 25.0%
! TGACAAGTAAACTGATAAAA+AGG - chr8_3:64689471-64689490 None:intergenic 25.0%
TGGAACAATCTGAAAAAGTT+TGG - chr8_3:64685346-64685365 None:intergenic 30.0%
! TTTCTTCGATTTGAGTGTAA+TGG + chr8_3:64685544-64685563 Msa1302190:intron 30.0%
TGTATCTATTATTTGAGGAC+AGG + chr8_3:64685649-64685668 Msa1302190:CDS 30.0%
!! TTTGTGTTTGTGATTGGTTT+AGG + chr8_3:64685960-64685979 Msa1302190:intron 30.0%
!! TTGTGATTGGTTTAGGTTAT+TGG + chr8_3:64685967-64685986 Msa1302190:intron 30.0%
!! CTGTTTTAAACCACTCAAAT+TGG + chr8_3:64686190-64686209 Msa1302190:intron 30.0%
! ATTTGTTCCATGAGATTTTG+TGG + chr8_3:64686508-64686527 Msa1302190:intron 30.0%
GTGTTCCTATTATGTGAAAA+CGG + chr8_3:64686617-64686636 Msa1302190:CDS 30.0%
TGTTCCTATTATGTGAAAAC+GGG + chr8_3:64686618-64686637 Msa1302190:CDS 30.0%
ACAGTTTGATAAATAGGTGA+AGG - chr8_3:64686753-64686772 None:intergenic 30.0%
AAGCAATCAAAACAAAAGTC+CGG - chr8_3:64686931-64686950 None:intergenic 30.0%
AGTTGAGAGATAATCATTAC+CGG - chr8_3:64687374-64687393 None:intergenic 30.0%
CCAAAAAATATAGTACCAGA+GGG - chr8_3:64687456-64687475 None:intergenic 30.0%
TCCAAAAAATATAGTACCAG+AGG - chr8_3:64687457-64687476 None:intergenic 30.0%
ATTTATTATTCCTCGTATGC+AGG + chr8_3:64687559-64687578 Msa1302190:intron 30.0%
AAGAACCAACTGACAAAAAA+AGG - chr8_3:64687656-64687675 None:intergenic 30.0%
!!! ATTTTTTTTTTTTTCGGGGG+GGG - chr8_3:64687852-64687871 None:intergenic 30.0%
!!! CATTTTTTTTTTTTTCGGGG+GGG - chr8_3:64687853-64687872 None:intergenic 30.0%
AGTACTGCAAAAATCTTCAA+CGG - chr8_3:64687944-64687963 None:intergenic 30.0%
!!! AACCACATATTATTTTGACG+TGG + chr8_3:64688190-64688209 Msa1302190:intron 30.0%
TTGGACTTCAGGTAAATAAT+AGG + chr8_3:64688271-64688290 Msa1302190:intron 30.0%
! GATAAAATGGAGTGATAATG+AGG - chr8_3:64688847-64688866 None:intergenic 30.0%
TGAACACAAAGACAATTGAT+TGG - chr8_3:64688961-64688980 None:intergenic 30.0%
CTTTGATCTTGAATAAACCA+TGG + chr8_3:64689003-64689022 Msa1302190:three_prime_UTR 30.0%
! AAAATTTTCAAAGTTGGCCA+TGG - chr8_3:64689023-64689042 None:intergenic 30.0%
CAAAAAATAGACATGTGGAT+GGG - chr8_3:64689115-64689134 None:intergenic 30.0%
ACAAAAAATAGACATGTGGA+TGG - chr8_3:64689116-64689135 None:intergenic 30.0%
AAGCACAAAAAATAGACATG+TGG - chr8_3:64689120-64689139 None:intergenic 30.0%
!!! CAAAACCCTTTTTTGCATTT+GGG + chr8_3:64689190-64689209 Msa1302190:three_prime_UTR 30.0%
!! AAGTAAAATGCTTGACTTGT+TGG + chr8_3:64689362-64689381 Msa1302190:three_prime_UTR 30.0%
!! AGTAAAATGCTTGACTTGTT+GGG + chr8_3:64689363-64689382 Msa1302190:three_prime_UTR 30.0%
AAGAAACTAGAGTGAGAAAC+TGG - chr8_3:64685275-64685294 None:intergenic 35.0%
! TTCATTCACACGCTTTTCAT+CGG + chr8_3:64685293-64685312 Msa1302190:five_prime_UTR 35.0%
! ACCATTCATTCTCTGTTTTG+AGG + chr8_3:64685317-64685336 Msa1302190:five_prime_UTR 35.0%
!! CCATTCATTCTCTGTTTTGA+GGG + chr8_3:64685318-64685337 Msa1302190:five_prime_UTR 35.0%
! AGTGATTTTGTGAATGTTGC+AGG + chr8_3:64685568-64685587 Msa1302190:intron 35.0%
! GTGATTTTGTGAATGTTGCA+GGG + chr8_3:64685569-64685588 Msa1302190:intron 35.0%
TAGATACAATCAGCTTCATC+AGG - chr8_3:64685637-64685656 None:intergenic 35.0%
! TATTTGAGGACAGGTTTTTG+CGG + chr8_3:64685658-64685677 Msa1302190:CDS 35.0%
AATAAAAATTTACCGCGCCA+CGG - chr8_3:64685720-64685739 None:intergenic 35.0%
! GTTTTTGATGTGATTGTCTC+TGG + chr8_3:64685773-64685792 Msa1302190:intron 35.0%
CACTTAATTGTGTGTGATTG+AGG + chr8_3:64685902-64685921 Msa1302190:intron 35.0%
TTGAGGATGTGCATTAAACA+TGG + chr8_3:64685919-64685938 Msa1302190:intron 35.0%
TAGGGATTTGTGTTTGTGAT+TGG + chr8_3:64685954-64685973 Msa1302190:intron 35.0%
CATAAACTGAATTAACCACC+TGG - chr8_3:64686044-64686063 None:intergenic 35.0%
GACGAATAACAGTGTCAATT+GGG - chr8_3:64686109-64686128 None:intergenic 35.0%
AGACGAATAACAGTGTCAAT+TGG - chr8_3:64686110-64686129 None:intergenic 35.0%
! ACTGTTATTCGTCTTTTGTG+TGG + chr8_3:64686116-64686135 Msa1302190:intron 35.0%
TCCATAACAATTTAGCGACA+CGG - chr8_3:64686450-64686469 None:intergenic 35.0%
GCATAAACCACAAAATCTCA+TGG - chr8_3:64686518-64686537 None:intergenic 35.0%
! TTGTCCCGTTTTCACATAAT+AGG - chr8_3:64686625-64686644 None:intergenic 35.0%
! TGATAAATAGGTGAAGGTAC+CGG - chr8_3:64686747-64686766 None:intergenic 35.0%
GGCTGTACAGTTTGATAAAT+AGG - chr8_3:64686759-64686778 None:intergenic 35.0%
! ATATTGTTGTTGTGAAGGAC+CGG - chr8_3:64686787-64686806 None:intergenic 35.0%
! ACACCATATTGTTGTTGTGA+AGG - chr8_3:64686792-64686811 None:intergenic 35.0%
AGCAATCAAAACAAAAGTCC+GGG - chr8_3:64686930-64686949 None:intergenic 35.0%
TGTCAGCATTACATGAAAAC+AGG + chr8_3:64687254-64687273 Msa1302190:CDS 35.0%
GTCAGCATTACATGAAAACA+GGG + chr8_3:64687255-64687274 Msa1302190:CDS 35.0%
TCAGCATTACATGAAAACAG+GGG + chr8_3:64687256-64687275 Msa1302190:CDS 35.0%
AAAACAGGGGACTGTAAATT+TGG + chr8_3:64687269-64687288 Msa1302190:CDS 35.0%
! ATAGGACTAAGGTTCACTTT+TGG - chr8_3:64687335-64687354 None:intergenic 35.0%
AAAGTGAACCTTAGTCCTAT+TGG + chr8_3:64687335-64687354 Msa1302190:CDS 35.0%
GTTGAGAGATAATCATTACC+GGG - chr8_3:64687373-64687392 None:intergenic 35.0%
!! ATCCACTTTGGTTCTTGAAT+TGG + chr8_3:64687397-64687416 Msa1302190:intron 35.0%
AACCAATTCAAGAACCAAAG+TGG - chr8_3:64687402-64687421 None:intergenic 35.0%
AATATTCTCTGATTTCCCTC+TGG + chr8_3:64687438-64687457 Msa1302190:intron 35.0%
!!! CCCTCTGGTACTATATTTTT+TGG + chr8_3:64687453-64687472 Msa1302190:intron 35.0%
CATTGAAAACAATTCACAGC+TGG + chr8_3:64687628-64687647 Msa1302190:intron 35.0%
!!! TGGAACCTTTTTTTGTCAGT+TGG + chr8_3:64687648-64687667 Msa1302190:intron 35.0%
!!! TTTTTTTTTTTTTCGGGGGG+GGG - chr8_3:64687851-64687870 None:intergenic 35.0%
TCAAGCTCAAGTAATTATGC+AGG - chr8_3:64688071-64688090 None:intergenic 35.0%
GATTAAACGATTGTGGAAGT+AGG + chr8_3:64688140-64688159 Msa1302190:intron 35.0%
ATACTTTGTCTTTGGACTTC+AGG + chr8_3:64688260-64688279 Msa1302190:intron 35.0%
AAACTTACAAAATCCACGCT+GGG - chr8_3:64688454-64688473 None:intergenic 35.0%
!!! CTTTTAAGTTATCCCAGTTC+AGG + chr8_3:64688919-64688938 Msa1302190:three_prime_UTR 35.0%
! CCAAATGCAAAAAAGGGTTT+TGG - chr8_3:64689192-64689211 None:intergenic 35.0%
!!! CCAAAACCCTTTTTTGCATT+TGG + chr8_3:64689189-64689208 Msa1302190:three_prime_UTR 35.0%
ATTGTTCCCAAGATATCGAA+AGG + chr8_3:64689251-64689270 Msa1302190:three_prime_UTR 35.0%
GGTAAACCTTTCGATATCTT+GGG - chr8_3:64689260-64689279 None:intergenic 35.0%
! TTTTACTTGTCACAACACCA+TGG - chr8_3:64689350-64689369 None:intergenic 35.0%
!! AGAAACTGGTTCGGATTTCT+GGG - chr8_3:64685261-64685280 None:intergenic 40.0%
ACTAGAGTGAGAAACTGGTT+CGG - chr8_3:64685270-64685289 None:intergenic 40.0%
CCCTCAAAACAGAGAATGAA+TGG - chr8_3:64685321-64685340 None:intergenic 40.0%
GACGAAACGAAGGGTAAAAA+TGG - chr8_3:64685366-64685385 None:intergenic 40.0%
CGTACCTTTGTTCCATTGTA+CGG - chr8_3:64685388-64685407 None:intergenic 40.0%
CGTACAATGGAACAAAGGTA+CGG + chr8_3:64685386-64685405 Msa1302190:exon 40.0%
TTTGTGAATGTTGCAGGGTA+TGG + chr8_3:64685574-64685593 Msa1302190:intron 40.0%
! GTTTTTGCGGTTATGGTTCT+AGG + chr8_3:64685671-64685690 Msa1302190:CDS 40.0%
TGAATTAACCACCTGGCAAA+CGG - chr8_3:64686037-64686056 None:intergenic 40.0%
CAGTTTCGTTCCAATTTGAG+TGG - chr8_3:64686203-64686222 None:intergenic 40.0%
CCATAACAATTTAGCGACAC+GGG - chr8_3:64686449-64686468 None:intergenic 40.0%
AAAGTACAAACCACTCGCAA+CGG - chr8_3:64686476-64686495 None:intergenic 40.0%
AAAACGGGACAATGCAAGTT+TGG + chr8_3:64686633-64686652 Msa1302190:CDS 40.0%
GGTCCTTCACAACAACAATA+TGG + chr8_3:64686786-64686805 Msa1302190:CDS 40.0%
! AATATGGTGTACTTGTTGCG+AGG + chr8_3:64686802-64686821 Msa1302190:CDS 40.0%
ACAAATGAGCCATGTAGAAG+AGG - chr8_3:64686831-64686850 None:intergenic 40.0%
ACATTACCATTGGCCCATAA+GGG - chr8_3:64686860-64686879 None:intergenic 40.0%
!!! AGCTTTTGAGTTCTAGATGC+AGG + chr8_3:64686977-64686996 Msa1302190:intron 40.0%
! GAGTACTAGAAGGAAGTACA+GGG - chr8_3:64687016-64687035 None:intergenic 40.0%
TTGGTAAGGTCCAGTATAGA+CGG - chr8_3:64687096-64687115 None:intergenic 40.0%
AGGAACACTCATTACCTGAA+AGG + chr8_3:64687216-64687235 Msa1302190:CDS 40.0%
ATGTAGATATCATCATCCGC+CGG + chr8_3:64687298-64687317 Msa1302190:CDS 40.0%
CTCTCAACTCATATCCACTT+TGG + chr8_3:64687385-64687404 Msa1302190:intron 40.0%
GAAATTGAATCCTGCATACG+AGG - chr8_3:64687572-64687591 None:intergenic 40.0%
!! TAGTGAACTCTTTTCTGGGA+TGG + chr8_3:64687681-64687700 Msa1302190:intron 40.0%
AGGAATATGCAAGAGTAGTG+AGG + chr8_3:64687789-64687808 Msa1302190:intron 40.0%
AGAGTAGTGAGGAGTTTGTA+TGG + chr8_3:64687800-64687819 Msa1302190:intron 40.0%
GAGTAGTGAGGAGTTTGTAT+GGG + chr8_3:64687801-64687820 Msa1302190:intron 40.0%
!!! TTTTTTTTTTTTCGGGGGGG+GGG - chr8_3:64687850-64687869 None:intergenic 40.0%
TGACGTGTTGAGTAGTATGT+TGG + chr8_3:64687878-64687897 Msa1302190:intron 40.0%
! ATTTGGGACAAGGTGCAATA+AGG - chr8_3:64688112-64688131 None:intergenic 40.0%
GGCCACGTCAAAATAATATG+TGG - chr8_3:64688195-64688214 None:intergenic 40.0%
CAAACTTACAAAATCCACGC+TGG - chr8_3:64688455-64688474 None:intergenic 40.0%
! CAGCGTGGATTTTGTAAGTT+TGG + chr8_3:64688453-64688472 Msa1302190:CDS 40.0%
GTGCAAGTTTGATCATCCTA+CGG + chr8_3:64688482-64688501 Msa1302190:CDS 40.0%
TGCAAGTTTGATCATCCTAC+GGG + chr8_3:64688483-64688502 Msa1302190:CDS 40.0%
TGCAACTGGCATATCAGAAA+GGG - chr8_3:64688538-64688557 None:intergenic 40.0%
!! GCTCATTGATGATGACATTC+TGG - chr8_3:64688664-64688683 None:intergenic 40.0%
! CATTCACATTGCTTAGCTTG+AGG - chr8_3:64688820-64688839 None:intergenic 40.0%
CGATTGACTGTCTTTACTCA+TGG + chr8_3:64688876-64688895 Msa1302190:three_prime_UTR 40.0%
TTGACTGTCTTTACTCATGG+AGG + chr8_3:64688879-64688898 Msa1302190:three_prime_UTR 40.0%
TGACTGTCTTTACTCATGGA+GGG + chr8_3:64688880-64688899 Msa1302190:three_prime_UTR 40.0%
TTGATTGGTGCAATGACTGT+TGG - chr8_3:64688946-64688965 None:intergenic 40.0%
AAAGCAAGTTGCGACTGTAT+GGG - chr8_3:64689051-64689070 None:intergenic 40.0%
AAAAGCAAGTTGCGACTGTA+TGG - chr8_3:64689052-64689071 None:intergenic 40.0%
CTTGGGAACAATAGCAAACA+GGG - chr8_3:64689243-64689262 None:intergenic 40.0%
TCTTGGGAACAATAGCAAAC+AGG - chr8_3:64689244-64689263 None:intergenic 40.0%
CGGTAAACCTTTCGATATCT+TGG - chr8_3:64689261-64689280 None:intergenic 40.0%
TACCGTGAAGAGAAGTTATC+AGG + chr8_3:64689276-64689295 Msa1302190:three_prime_UTR 40.0%
CTCCTGATAACTTCTCTTCA+CGG - chr8_3:64689281-64689300 None:intergenic 40.0%
GTTATCAGGAGACTACAATG+AGG + chr8_3:64689290-64689309 Msa1302190:three_prime_UTR 40.0%
! TGTGAGATCAGGTGATTTTC+TGG + chr8_3:64689499-64689518 Msa1302190:three_prime_UTR 40.0%
AACAGAGCAGAGAGAAGAGA+AGG + chr8_3:64685207-64685226 Msa1302190:five_prime_UTR 45.0%
ACAGAGCAGAGAGAAGAGAA+GGG + chr8_3:64685208-64685227 Msa1302190:five_prime_UTR 45.0%
!! GAAACTGGTTCGGATTTCTG+GGG - chr8_3:64685260-64685279 None:intergenic 45.0%
!! GAGAAACTGGTTCGGATTTC+TGG - chr8_3:64685262-64685281 None:intergenic 45.0%
CATTGTACGGACGAAACGAA+GGG - chr8_3:64685375-64685394 None:intergenic 45.0%
TCGTCCGTACAATGGAACAA+AGG + chr8_3:64685381-64685400 Msa1302190:exon 45.0%
! AGGACAGGTTTTTGCGGTTA+TGG + chr8_3:64685664-64685683 Msa1302190:CDS 45.0%
! TTTAGGTTATTGGAGCTGCG+AGG + chr8_3:64685977-64685996 Msa1302190:intron 45.0%
! AACTCGTTCTGGATATTCCC+CGG - chr8_3:64686007-64686026 None:intergenic 45.0%
GAATTAACCACCTGGCAAAC+GGG - chr8_3:64686036-64686055 None:intergenic 45.0%
! TCTAGGATGGTGATACTTGC+AGG - chr8_3:64686405-64686424 None:intergenic 45.0%
CAAGTATCACCATCCTAGAC+AGG + chr8_3:64686406-64686425 Msa1302190:CDS 45.0%
! CCCGTGTCGCTAAATTGTTA+TGG + chr8_3:64686446-64686465 Msa1302190:CDS 45.0%
TTATGGATATCCGTTGCGAG+TGG + chr8_3:64686463-64686482 Msa1302190:CDS 45.0%
!! CTGGTGATGGTGCTATCATT+TGG - chr8_3:64686698-64686717 None:intergenic 45.0%
ATTGGCAGAGGTGAAACTTG+GGG - chr8_3:64686723-64686742 None:intergenic 45.0%
CATTGGCAGAGGTGAAACTT+GGG - chr8_3:64686724-64686743 None:intergenic 45.0%
AATGAGCCATGTAGAAGAGG+TGG - chr8_3:64686828-64686847 None:intergenic 45.0%
TCTACATGGCTCATTTGTCC+AGG + chr8_3:64686833-64686852 Msa1302190:CDS 45.0%
CTACATGGCTCATTTGTCCA+GGG + chr8_3:64686834-64686853 Msa1302190:CDS 45.0%
GACATTACCATTGGCCCATA+AGG - chr8_3:64686861-64686880 None:intergenic 45.0%
! GGAGTACTAGAAGGAAGTAC+AGG - chr8_3:64687017-64687036 None:intergenic 45.0%
! ACACTCAACGGAGTACTAGA+AGG - chr8_3:64687026-64687045 None:intergenic 45.0%
TCTAGTACTCCGTTGAGTGT+TGG + chr8_3:64687026-64687045 Msa1302190:CDS 45.0%
! TTGGTTCGACGCAGCTTTAT+GGG + chr8_3:64687045-64687064 Msa1302190:CDS 45.0%
! GTATAGACGGTTGTTGGTGA+AGG - chr8_3:64687083-64687102 None:intergenic 45.0%
TCACCAACAACCGTCTATAC+TGG + chr8_3:64687083-64687102 Msa1302190:CDS 45.0%
GATTGATAAGGACCAGCTGA+GGG - chr8_3:64687158-64687177 None:intergenic 45.0%
AGATTGATAAGGACCAGCTG+AGG - chr8_3:64687159-64687178 None:intergenic 45.0%
GCTGGTCCTTATCAATCTTC+TGG + chr8_3:64687161-64687180 Msa1302190:CDS 45.0%
GAGGGACCAGAAGATTGATA+AGG - chr8_3:64687170-64687189 None:intergenic 45.0%
TCCTTCAGGTAGTAGTCAGA+AGG + chr8_3:64687196-64687215 Msa1302190:CDS 45.0%
TCCTTCTGACTACTACCTGA+AGG - chr8_3:64687200-64687219 None:intergenic 45.0%
AAGGAAGGCCAATAGGACTA+AGG - chr8_3:64687346-64687365 None:intergenic 45.0%
ATAATCATTACCGGGCGCAA+AGG - chr8_3:64687365-64687384 None:intergenic 45.0%
TAGCTAGCTAGCTAGCTGTA+AGG + chr8_3:64687498-64687517 Msa1302190:intron 45.0%
CTAGGACTCAGTTGAATGAG+TGG + chr8_3:64687753-64687772 Msa1302190:intron 45.0%
TGAGTGGTGTGTGCTTTACT+AGG + chr8_3:64687769-64687788 Msa1302190:intron 45.0%
!!! TTTTTTTTTTTCGGGGGGGG+GGG - chr8_3:64687849-64687868 None:intergenic 45.0%
CGTGTTGAGTAGTATGTTGG+AGG + chr8_3:64687881-64687900 Msa1302190:intron 45.0%
!! AGCAGATGGACTGTAACTCA+GGG - chr8_3:64688511-64688530 None:intergenic 45.0%
!! AAGCAGATGGACTGTAACTC+AGG - chr8_3:64688512-64688531 None:intergenic 45.0%
TCAGAAAGGGAAGAAGCAGA+TGG - chr8_3:64688525-64688544 None:intergenic 45.0%
GTGCAACTGGCATATCAGAA+AGG - chr8_3:64688539-64688558 None:intergenic 45.0%
ACTCGGATGATGAGGATGAT+GGG - chr8_3:64688596-64688615 None:intergenic 45.0%
AACTCGGATGATGAGGATGA+TGG - chr8_3:64688597-64688616 None:intergenic 45.0%
GATGACATTCTGGATGAAGC+AGG - chr8_3:64688654-64688673 None:intergenic 45.0%
!! AGCTGGCTTGACTTTGTCAA+CGG + chr8_3:64688698-64688717 Msa1302190:CDS 45.0%
GACTTTGTCAACGGTTGTAC+CGG + chr8_3:64688707-64688726 Msa1302190:CDS 45.0%
TGGGCATCTGATTGAGAAAC+CGG - chr8_3:64688729-64688748 None:intergenic 45.0%
! GGAACTCTGAGAAGATGGTT+GGG - chr8_3:64688748-64688767 None:intergenic 45.0%
CAACCATCTTCTCAGAGTTC+CGG + chr8_3:64688747-64688766 Msa1302190:CDS 45.0%
ACTGGGAGTTGCTAAAGAAC+CGG - chr8_3:64688769-64688788 None:intergenic 45.0%
! TTAGCTTGAGGTGTGAGAGA+CGG - chr8_3:64688808-64688827 None:intergenic 45.0%
ACTCATGGAGGGTCTCAAAT+AGG + chr8_3:64688891-64688910 Msa1302190:three_prime_UTR 45.0%
ATGACTGTTGGACCTGAACT+GGG - chr8_3:64688934-64688953 None:intergenic 45.0%
AATGACTGTTGGACCTGAAC+TGG - chr8_3:64688935-64688954 None:intergenic 45.0%
TCAAGCTTTCGTGTGAGATC+AGG + chr8_3:64689488-64689507 Msa1302190:three_prime_UTR 45.0%
CCATTGTACGGACGAAACGA+AGG - chr8_3:64685376-64685395 None:intergenic 50.0%
CCTTCGTTTCGTCCGTACAA+TGG + chr8_3:64685373-64685392 Msa1302190:exon 50.0%
! AGTACCTTCATCAGCACCGA+CGG - chr8_3:64685468-64685487 None:intergenic 50.0%
GTGAATGTTGCAGGGTATGG+TGG + chr8_3:64685577-64685596 Msa1302190:intron 50.0%
!! TGTTGCAGGGTATGGTGGAT+TGG + chr8_3:64685582-64685601 Msa1302190:intron 50.0%
!! TATGGTGGATTGGTTGGTGG+TGG + chr8_3:64685592-64685611 Msa1302190:CDS 50.0%
TCAGCTTCATCAGGTCGTTG+TGG - chr8_3:64685628-64685647 None:intergenic 50.0%
!! GCGGTTATGGTTCTAGGTGT+CGG + chr8_3:64685677-64685696 Msa1302190:CDS 50.0%
TTTAACCATCCACGTGACCG+TGG + chr8_3:64685700-64685719 Msa1302190:CDS 50.0%
GGGGAATATCCAGAACGAGT+TGG + chr8_3:64686006-64686025 Msa1302190:CDS 50.0%
TCTTGCATGCATGTCAGTGC+AGG + chr8_3:64686252-64686271 Msa1302190:intron 50.0%
TCATGCTGCAGTACTATGCG+AGG + chr8_3:64686354-64686373 Msa1302190:intron 50.0%
AGGACGGGATCGTGCAAATT+TGG + chr8_3:64686374-64686393 Msa1302190:CDS 50.0%
GTATCACCATCCTAGACAGG+CGG + chr8_3:64686409-64686428 Msa1302190:CDS 50.0%
ATTCCATCATCCACAGCCTG+CGG + chr8_3:64686668-64686687 Msa1302190:CDS 50.0%
GAAACTTGGGGAACTGGTGA+TGG - chr8_3:64686711-64686730 None:intergenic 50.0%
AGAGGTGAAACTTGGGGAAC+TGG - chr8_3:64686717-64686736 None:intergenic 50.0%
! GCATTGGCAGAGGTGAAACT+TGG - chr8_3:64686725-64686744 None:intergenic 50.0%
AGTTTCACCTCTGCCAATGC+CGG + chr8_3:64686725-64686744 Msa1302190:CDS 50.0%
!! ATAGGTGAAGGTACCGGCAT+TGG - chr8_3:64686741-64686760 None:intergenic 50.0%
TGTTGTTGTGAAGGACCGGA+CGG - chr8_3:64686783-64686802 None:intergenic 50.0%
TCATTTGTCCAGGGCCCTTA+TGG + chr8_3:64686843-64686862 Msa1302190:CDS 50.0%
CATTTGTCCAGGGCCCTTAT+GGG + chr8_3:64686844-64686863 Msa1302190:CDS 50.0%
! ATGGTGGGGGACATTACCAT+TGG - chr8_3:64686870-64686889 None:intergenic 50.0%
! AATGGTAATGTCCCCCACCA+TGG + chr8_3:64686869-64686888 Msa1302190:CDS 50.0%
TGAAAAAGGGACCATGGTGG+GGG - chr8_3:64686883-64686902 None:intergenic 50.0%
CTGAAAAAGGGACCATGGTG+GGG - chr8_3:64686884-64686903 None:intergenic 50.0%
CCTGAAAAAGGGACCATGGT+GGG - chr8_3:64686885-64686904 None:intergenic 50.0%
AAGGGCTCCAGCCTGAAAAA+GGG - chr8_3:64686896-64686915 None:intergenic 50.0%
TAAGGGCTCCAGCCTGAAAA+AGG - chr8_3:64686897-64686916 None:intergenic 50.0%
AGCCCTTATCAGGTATGTCC+CGG + chr8_3:64686909-64686928 Msa1302190:intron 50.0%
GTCCGGGACATACCTGATAA+GGG - chr8_3:64686914-64686933 None:intergenic 50.0%
AGTCCGGGACATACCTGATA+AGG - chr8_3:64686915-64686934 None:intergenic 50.0%
TGCGTCGAACCAACACTCAA+CGG - chr8_3:64687038-64687057 None:intergenic 50.0%
!! GTTGGTTCGACGCAGCTTTA+TGG + chr8_3:64687044-64687063 Msa1302190:CDS 50.0%
GGTCCAGTATAGACGGTTGT+TGG - chr8_3:64687089-64687108 None:intergenic 50.0%
ACTGGACCTTACCAATCCTC+TGG + chr8_3:64687101-64687120 Msa1302190:CDS 50.0%
GATTGGTAAGGACCAGCTGA+GGG - chr8_3:64687128-64687147 None:intergenic 50.0%
AGATTGGTAAGGACCAGCTG+AGG - chr8_3:64687129-64687148 None:intergenic 50.0%
GCTGGTCCTTACCAATCTTC+TGG + chr8_3:64687131-64687150 Msa1302190:CDS 50.0%
GAGGGACCAGAAGATTGGTA+AGG - chr8_3:64687140-64687159 None:intergenic 50.0%
CAATCTTCTGGTCCCTCAAC+CGG + chr8_3:64687173-64687192 Msa1302190:CDS 50.0%
CTGACTACTACCTGAAGGAC+CGG - chr8_3:64687195-64687214 None:intergenic 50.0%
TGCTGACATTCCTGCTGATC+AGG - chr8_3:64687242-64687261 None:intergenic 50.0%
ATATCATCATCCGCCGGACA+TGG + chr8_3:64687304-64687323 Msa1302190:CDS 50.0%
TATCATCATCCGCCGGACAT+GGG + chr8_3:64687305-64687324 Msa1302190:CDS 50.0%
!! ACTTTTGGTGCACCCATGTC+CGG - chr8_3:64687320-64687339 None:intergenic 50.0%
CACACGTCTGTCTGATCTCT+AGG + chr8_3:64687735-64687754 Msa1302190:intron 50.0%
!!! TTTTTTTTTTCGGGGGGGGG+GGG - chr8_3:64687848-64687867 None:intergenic 50.0%
CGCTGGGTATAATGAGTGCA+AGG - chr8_3:64688438-64688457 None:intergenic 50.0%
TGCACTCATTATACCCAGCG+TGG + chr8_3:64688438-64688457 Msa1302190:CDS 50.0%
!! TGATGGGGCAAGAGTACCAA+TGG - chr8_3:64688580-64688599 None:intergenic 50.0%
CTCGGATGATGAGGATGATG+GGG - chr8_3:64688595-64688614 None:intergenic 50.0%
CATCCTCATCATCCGAGTTG+AGG + chr8_3:64688598-64688617 Msa1302190:CDS 50.0%
TGCAAGTTCAGGCCTCAACT+CGG - chr8_3:64688613-64688632 None:intergenic 50.0%
TTGAGGCCTGAACTTGCATC+AGG + chr8_3:64688615-64688634 Msa1302190:CDS 50.0%
CTGGATCCTGATGCAAGTTC+AGG - chr8_3:64688624-64688643 None:intergenic 50.0%
ACTTGCATCAGGATCCAGCA+AGG + chr8_3:64688626-64688645 Msa1302190:CDS 50.0%
! CGGAACTCTGAGAAGATGGT+TGG - chr8_3:64688749-64688768 None:intergenic 50.0%
! GAACCGGAACTCTGAGAAGA+TGG - chr8_3:64688753-64688772 None:intergenic 50.0%
GTGGATGGGCATGTGCATAA+TGG - chr8_3:64689101-64689120 None:intergenic 50.0%
GAGACGACCCATCGTTAGCT+CGG - chr8_3:64685412-64685431 None:intergenic 55.0%
!! ACTTCCGTCGGTGCTGATGA+AGG + chr8_3:64685461-64685480 Msa1302190:CDS 55.0%
!! GCAGGGTATGGTGGATTGGT+TGG + chr8_3:64685586-64685605 Msa1302190:intron 55.0%
!! GGGTATGGTGGATTGGTTGG+TGG + chr8_3:64685589-64685608 Msa1302190:intron 55.0%
ATTGGAGCTGCGAGGATTGC+CGG + chr8_3:64685985-64686004 Msa1302190:CDS 55.0%
GCTGCAGTACTATGCGAGGA+CGG + chr8_3:64686358-64686377 Msa1302190:intron 55.0%
CTGCAGTACTATGCGAGGAC+GGG + chr8_3:64686359-64686378 Msa1302190:intron 55.0%
TTCCATCATCCACAGCCTGC+GGG + chr8_3:64686669-64686688 Msa1302190:CDS 55.0%
CAAACTGTACAGCCTCCGTC+CGG + chr8_3:64686765-64686784 Msa1302190:CDS 55.0%
! CCCACCATGGTCCCTTTTTC+AGG + chr8_3:64686882-64686901 Msa1302190:CDS 55.0%
GCCTGAAAAAGGGACCATGG+TGG - chr8_3:64686886-64686905 None:intergenic 55.0%
CCAGCCTGAAAAAGGGACCA+TGG - chr8_3:64686889-64686908 None:intergenic 55.0%
!!! CCATGGTCCCTTTTTCAGGC+TGG + chr8_3:64686886-64686905 Msa1302190:CDS 55.0%
TTCAGGCTGGAGCCCTTATC+AGG + chr8_3:64686899-64686918 Msa1302190:CDS 55.0%
! GAGGGACCAGAGGATTGGTA+AGG - chr8_3:64687110-64687129 None:intergenic 55.0%
CAGCTGAGGGACCAGAAGAT+TGG - chr8_3:64687145-64687164 None:intergenic 55.0%
CAATCTTCTGGTCCCTCAGC+TGG + chr8_3:64687143-64687162 Msa1302190:CDS 55.0%
CTACCTGAAGGACCGGTTGA+GGG - chr8_3:64687188-64687207 None:intergenic 55.0%
ACTACCTGAAGGACCGGTTG+AGG - chr8_3:64687189-64687208 None:intergenic 55.0%
ACCTGAAAGGCCTGATCAGC+AGG + chr8_3:64687229-64687248 Msa1302190:CDS 55.0%
TCCTGCTGATCAGGCCTTTC+AGG - chr8_3:64687233-64687252 None:intergenic 55.0%
!! TATTGGCCTTCCTTTGCGCC+CGG + chr8_3:64687352-64687371 Msa1302190:CDS 55.0%
TCATTACCGGGCGCAAAGGA+AGG - chr8_3:64687361-64687380 None:intergenic 55.0%
!!! TTTTTTTTTCGGGGGGGGGG+GGG - chr8_3:64687847-64687866 None:intergenic 55.0%
CTGTAACTCAGGGATCCCGT+AGG - chr8_3:64688501-64688520 None:intergenic 55.0%
CCAGTTGCACCCTATCCTGT+GGG + chr8_3:64688549-64688568 Msa1302190:CDS 55.0%
! ATGGCGGAACCCACAGGATA+GGG - chr8_3:64688561-64688580 None:intergenic 55.0%
! AATGGCGGAACCCACAGGAT+AGG - chr8_3:64688562-64688581 None:intergenic 55.0%
TATCCTGTGGGTTCCGCCAT+TGG + chr8_3:64688561-64688580 Msa1302190:CDS 55.0%
!! TGGGGCAAGAGTACCAATGG+CGG - chr8_3:64688577-64688596 None:intergenic 55.0%
AGGCCTCAACTCGGATGATG+AGG - chr8_3:64688604-64688623 None:intergenic 55.0%
! AGCACATCGACTGCTTCAGC+TGG + chr8_3:64688681-64688700 Msa1302190:CDS 55.0%
!! GTGCTACTTGTGGTGGCACT+GGG - chr8_3:64688786-64688805 None:intergenic 55.0%
!! AGAGACGGTGCTACTTGTGG+TGG - chr8_3:64688793-64688812 None:intergenic 55.0%
!! GTGAGAGACGGTGCTACTTG+TGG - chr8_3:64688796-64688815 None:intergenic 55.0%
AGGTACGGCCGAGCTAACGA+TGG + chr8_3:64685401-64685420 Msa1302190:CDS 60.0%
GGTACGGCCGAGCTAACGAT+GGG + chr8_3:64685402-64685421 Msa1302190:CDS 60.0%
GTTGCACTCTGATCCGTCGC+CGG + chr8_3:64685433-64685452 Msa1302190:CDS 60.0%
ACTCTGATCCGTCGCCGGAA+TGG + chr8_3:64685438-64685457 Msa1302190:CDS 60.0%
ACGGAAGTCCATTCCGGCGA+CGG - chr8_3:64685449-64685468 None:intergenic 60.0%
! TCGCCGGAATGGACTTCCGT+CGG + chr8_3:64685449-64685468 Msa1302190:CDS 60.0%
! GCACCGACGGAAGTCCATTC+CGG - chr8_3:64685455-64685474 None:intergenic 60.0%
TTGGAGCTGCGAGGATTGCC+GGG + chr8_3:64685986-64686005 Msa1302190:CDS 60.0%
! ACGGGCTGTCCAACTCGTTC+TGG - chr8_3:64686018-64686037 None:intergenic 60.0%
AGTTGGACAGCCCGTTTGCC+AGG + chr8_3:64686023-64686042 Msa1302190:CDS 60.0%
TTCCTGCCGCCTGTCTAGGA+TGG - chr8_3:64686418-64686437 None:intergenic 60.0%
GTAGTTCCTGCCGCCTGTCT+AGG - chr8_3:64686422-64686441 None:intergenic 60.0%
GCTATCATTTGGCCACCCGC+AGG - chr8_3:64686687-64686706 None:intergenic 60.0%
!! GAAGGTACCGGCATTGGCAG+AGG - chr8_3:64686735-64686754 None:intergenic 60.0%
TGTTGTGAAGGACCGGACGG+AGG - chr8_3:64686780-64686799 None:intergenic 60.0%
GCGAGGCCACCTCTTCTACA+TGG + chr8_3:64686819-64686838 Msa1302190:CDS 60.0%
!! GGAAGTACAGGGCTTGCTGC+TGG - chr8_3:64687005-64687024 None:intergenic 60.0%
CAGCTGAGGGACCAGAGGAT+TGG - chr8_3:64687115-64687134 None:intergenic 60.0%
CAATCCTCTGGTCCCTCAGC+TGG + chr8_3:64687113-64687132 Msa1302190:CDS 60.0%
! TTTGGTGCACCCATGTCCGG+CGG - chr8_3:64687317-64687336 None:intergenic 60.0%
GGGCGCAAAGGAAGGCCAAT+AGG - chr8_3:64687353-64687372 None:intergenic 60.0%
!!! TTTTTTTTCGGGGGGGGGGG+GGG - chr8_3:64687846-64687865 None:intergenic 60.0%
GCCAGTTGCACCCTATCCTG+TGG + chr8_3:64688548-64688567 Msa1302190:CDS 60.0%
CCCACAGGATAGGGTGCAAC+TGG - chr8_3:64688552-64688571 None:intergenic 60.0%
! GTACCAATGGCGGAACCCAC+AGG - chr8_3:64688567-64688586 None:intergenic 60.0%
GGATGAAGCAGGCTCCTTGC+TGG - chr8_3:64688643-64688662 None:intergenic 60.0%
!! GGTGCTACTTGTGGTGGCAC+TGG - chr8_3:64688787-64688806 None:intergenic 60.0%
TTTACCGCGCCACGGTCACG+TGG - chr8_3:64685712-64685731 None:intergenic 65.0%
TGGAGCTGCGAGGATTGCCG+GGG + chr8_3:64685987-64686006 Msa1302190:CDS 65.0%
TGGACAGCCCGTTTGCCAGG+TGG + chr8_3:64686026-64686045 Msa1302190:intron 65.0%
CACCATCCTAGACAGGCGGC+AGG + chr8_3:64686413-64686432 Msa1302190:CDS 65.0%
CACCCGCAGGCTGTGGATGA+TGG - chr8_3:64686674-64686693 None:intergenic 65.0%
CATCATCCACAGCCTGCGGG+TGG + chr8_3:64686672-64686691 Msa1302190:CDS 65.0%
ATTTGGCCACCCGCAGGCTG+TGG - chr8_3:64686681-64686700 None:intergenic 65.0%
CCATTGGCCCATAAGGGCCC+TGG - chr8_3:64686854-64686873 None:intergenic 65.0%
CCAGGGCCCTTATGGGCCAA+TGG + chr8_3:64686851-64686870 Msa1302190:CDS 65.0%
AGGACCAGCTGAGGGACCAG+AGG - chr8_3:64687120-64687139 None:intergenic 65.0%
GGTCCCTCAACCGGTCCTTC+AGG + chr8_3:64687182-64687201 Msa1302190:CDS 65.0%
!!! TTTTTTTCGGGGGGGGGGGG+GGG - chr8_3:64687845-64687864 None:intergenic 65.0%
CCATCCACGTGACCGTGGCG+CGG + chr8_3:64685705-64685724 Msa1302190:CDS 70.0%
!!! TTTTTTCGGGGGGGGGGGGG+GGG - chr8_3:64687844-64687863 None:intergenic 70.0%
CCGCGCCACGGTCACGTGGA+TGG - chr8_3:64685708-64685727 None:intergenic 75.0%
!!! TTTTTCGGGGGGGGGGGGGG+GGG - chr8_3:64687843-64687862 None:intergenic 75.0%
! TCGGGGGGGGGGGGGGGGGA+GGG - chr8_3:64687839-64687858 None:intergenic 90.0%
! TTCGGGGGGGGGGGGGGGGG+AGG - chr8_3:64687840-64687859 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 64685145 64689558 64685145 ID=Msa1302190;Name=Msa1302190
chr8_3 mRNA 64685145 64689558 64685145 ID=Msa1302190-mRNA-1;Parent=Msa1302190;Name=Msa1302190-mRNA-1;_AED=0.05;_eAED=0.05;_QI=247|1|1|1|1|1|7|731|500
chr8_3 exon 64685145 64685482 64685145 ID=Msa1302190-mRNA-1:exon:19495;Parent=Msa1302190-mRNA-1
chr8_3 exon 64685590 64685726 64685590 ID=Msa1302190-mRNA-1:exon:19496;Parent=Msa1302190-mRNA-1
chr8_3 exon 64685982 64686044 64685982 ID=Msa1302190-mRNA-1:exon:19497;Parent=Msa1302190-mRNA-1
chr8_3 exon 64686365 64686484 64686365 ID=Msa1302190-mRNA-1:exon:19498;Parent=Msa1302190-mRNA-1
chr8_3 exon 64686606 64686920 64686606 ID=Msa1302190-mRNA-1:exon:19499;Parent=Msa1302190-mRNA-1
chr8_3 exon 64686999 64687373 64686999 ID=Msa1302190-mRNA-1:exon:19500;Parent=Msa1302190-mRNA-1
chr8_3 exon 64688426 64689558 64688426 ID=Msa1302190-mRNA-1:exon:19501;Parent=Msa1302190-mRNA-1
chr8_3 five_prime_UTR 64685145 64685391 64685145 ID=Msa1302190-mRNA-1:five_prime_utr;Parent=Msa1302190-mRNA-1
chr8_3 CDS 64685392 64685482 64685392 ID=Msa1302190-mRNA-1:cds;Parent=Msa1302190-mRNA-1
chr8_3 CDS 64685590 64685726 64685590 ID=Msa1302190-mRNA-1:cds;Parent=Msa1302190-mRNA-1
chr8_3 CDS 64685982 64686044 64685982 ID=Msa1302190-mRNA-1:cds;Parent=Msa1302190-mRNA-1
chr8_3 CDS 64686365 64686484 64686365 ID=Msa1302190-mRNA-1:cds;Parent=Msa1302190-mRNA-1
chr8_3 CDS 64686606 64686920 64686606 ID=Msa1302190-mRNA-1:cds;Parent=Msa1302190-mRNA-1
chr8_3 CDS 64686999 64687373 64686999 ID=Msa1302190-mRNA-1:cds;Parent=Msa1302190-mRNA-1
chr8_3 CDS 64688426 64688827 64688426 ID=Msa1302190-mRNA-1:cds;Parent=Msa1302190-mRNA-1
chr8_3 three_prime_UTR 64688828 64689558 64688828 ID=Msa1302190-mRNA-1:three_prime_utr;Parent=Msa1302190-mRNA-1
Gene Sequence

>Msa1302190

ATGGAACAAAGGTACGGCCGAGCTAACGATGGGTCGTCTCAGTTGCACTCTGATCCGTCGCCGGAATGGACTTCCGTCGGTGCTGATGAAGGGTATGGTGGATTGGTTGGTGGTGGTGAATCGTATCCACAACGACCTGATGAAGCTGATTGTATCTATTATTTGAGGACAGGTTTTTGCGGTTATGGTTCTAGGTGTCGGTTTAACCATCCACGTGACCGTGGCGCGGTTATTGGAGCTGCGAGGATTGCCGGGGAATATCCAGAACGAGTTGGACAGCCCGTTTGCCAGTACTATGCGAGGACGGGATCGTGCAAATTTGGCGCTTCCTGCAAGTATCACCATCCTAGACAGGCGGCAGGAACTACTGCTCCCGTGTCGCTAAATTGTTATGGATATCCGTTGCGAGTGGGTGAGAAAGAGTGTTCCTATTATGTGAAAACGGGACAATGCAAGTTTGGTGCAACATGTAAATTCCATCATCCACAGCCTGCGGGTGGCCAAATGATAGCACCATCACCAGTTCCCCAAGTTTCACCTCTGCCAATGCCGGTACCTTCACCTATTTATCAAACTGTACAGCCTCCGTCCGGTCCTTCACAACAACAATATGGTGTACTTGTTGCGAGGCCACCTCTTCTACATGGCTCATTTGTCCAGGGCCCTTATGGGCCAATGGTAATGTCCCCCACCATGGTCCCTTTTTCAGGCTGGAGCCCTTATCAGGCTCCAGCAGCAAGCCCTGTACTTCCTTCTAGTACTCCGTTGAGTGTTGGTTCGACGCAGCTTTATGGGATAACTCAGCTACCTTCACCAACAACCGTCTATACTGGACCTTACCAATCCTCTGGTCCCTCAGCTGGTCCTTACCAATCTTCTGGTCCCTCAGCTGGTCCTTATCAATCTTCTGGTCCCTCAACCGGTCCTTCAGGTAGTAGTCAGAAGGAACACTCATTACCTGAAAGGCCTGATCAGCAGGAATGTCAGCATTACATGAAAACAGGGGACTGTAAATTTGGTTCTACATGTAGATATCATCATCCGCCGGACATGGGTGCACCAAAAGTGAACCTTAGTCCTATTGGCCTTCCTTTGCGCCCGGGAGCACAACCTTGCACTCATTATACCCAGCGTGGATTTTGTAAGTTTGGATCTGCGTGCAAGTTTGATCATCCTACGGGATCCCTGAGTTACAGTCCATCTGCTTCTTCCCTTTCTGATATGCCAGTTGCACCCTATCCTGTGGGTTCCGCCATTGGTACTCTTGCCCCATCATCCTCATCATCCGAGTTGAGGCCTGAACTTGCATCAGGATCCAGCAAGGAGCCTGCTTCATCCAGAATGTCATCATCAATGAGCACATCGACTGCTTCAGCTGGCTTGACTTTGTCAACGGTTGTACCGGTTTCTCAATCAGATGCCCAACCATCTTCTCAGAGTTCCGGTTCTTTAGCAACTCCCAGTGCCACCACAAGTAGCACCGTCTCTCACACCTCAAGCTAA
Protein sequence

>Msa1302190

MEQRYGRANDGSSQLHSDPSPEWTSVGADEGYGGLVGGGESYPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGAVIGAARIAGEYPERVGQPVCQYYARTGSCKFGASCKYHHPRQAAGTTAPVSLNCYGYPLRVGEKECSYYVKTGQCKFGATCKFHHPQPAGGQMIAPSPVPQVSPLPMPVPSPIYQTVQPPSGPSQQQYGVLVARPPLLHGSFVQGPYGPMVMSPTMVPFSGWSPYQAPAASPVLPSSTPLSVGSTQLYGITQLPSPTTVYTGPYQSSGPSAGPYQSSGPSAGPYQSSGPSTGPSGSSQKEHSLPERPDQQECQHYMKTGDCKFGSTCRYHHPPDMGAPKVNLSPIGLPLRPGAQPCTHYTQRGFCKFGSACKFDHPTGSLSYSPSASSLSDMPVAPYPVGSAIGTLAPSSSSSELRPELASGSSKEPASSRMSSSMSTSTASAGLTLSTVVPVSQSDAQPSSQSSGSLATPSATTSSTVSHTSS*