Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173140 | XP_003589050.2 | 96.207 | 580 | 21 | 1 | 1 | 580 | 1 | 579 | 0.0 | 1125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173140 | sp|Q38931|FKB62_ARATH | 53.042 | 526 | 237 | 5 | 27 | 546 | 29 | 550 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003640 | Msa1173140 | 0.829673 | 4.514116e-55 | -8.615850e-47 |
| Msa0006040 | Msa1173140 | 0.855855 | 4.766550e-62 | -8.615850e-47 |
| Msa0007440 | Msa1173140 | 0.816755 | 4.694913e-52 | -8.615850e-47 |
| Msa0011170 | Msa1173140 | 0.808797 | 2.596028e-50 | -8.615850e-47 |
| Msa0011960 | Msa1173140 | 0.810943 | 8.964702e-51 | -8.615850e-47 |
| Msa0012040 | Msa1173140 | 0.818993 | 1.466297e-52 | -8.615850e-47 |
| Msa0015610 | Msa1173140 | 0.820573 | 6.387630e-53 | -8.615850e-47 |
| Msa0020300 | Msa1173140 | 0.827341 | 1.650644e-54 | -8.615850e-47 |
| Msa0025730 | Msa1173140 | 0.821579 | 3.745319e-53 | -8.615850e-47 |
| Msa0026710 | Msa1173140 | 0.812541 | 4.024934e-51 | -8.615850e-47 |
| Msa0028660 | Msa1173140 | 0.841273 | 5.251572e-58 | -8.615850e-47 |
| Msa0032090 | Msa1173140 | 0.800837 | 1.194789e-48 | -8.615850e-47 |
| Msa0032580 | Msa1173140 | 0.808068 | 3.714596e-50 | -8.615850e-47 |
| Msa0033980 | Msa1173140 | 0.825086 | 5.678392e-54 | -8.615850e-47 |
| Msa0052640 | Msa1173140 | 0.984637 | 3.828646e-161 | -8.615850e-47 |
| Msa0052770 | Msa1173140 | 0.998374 | 3.071970e-263 | -8.615850e-47 |
| Msa0054750 | Msa1173140 | 0.851042 | 1.148513e-60 | -8.615850e-47 |
| Msa0054780 | Msa1173140 | 0.800229 | 1.589770e-48 | -8.615850e-47 |
| Msa0058300 | Msa1173140 | 0.857257 | 1.845969e-62 | -8.615850e-47 |
| Msa0063530 | Msa1173140 | 0.804821 | 1.797334e-49 | -8.615850e-47 |
| Msa0076320 | Msa1173140 | 0.818389 | 2.010860e-52 | -8.615850e-47 |
| Msa0081930 | Msa1173140 | 0.835466 | 1.651128e-56 | -8.615850e-47 |
| Msa0084940 | Msa1173140 | 0.812917 | 3.330607e-51 | -8.615850e-47 |
| Msa0096030 | Msa1173140 | 0.800221 | 1.595408e-48 | -8.615850e-47 |
| Msa0097780 | Msa1173140 | 0.954507 | 2.532762e-112 | -8.615850e-47 |
| Msa0113750 | Msa1173140 | 0.824667 | 7.129564e-54 | -8.615850e-47 |
| Msa0115270 | Msa1173140 | 0.823297 | 1.494624e-53 | -8.615850e-47 |
| Msa0606860 | Msa1173140 | 0.808214 | 3.456473e-50 | -8.615850e-47 |
| Msa0610430 | Msa1173140 | 0.846543 | 2.033628e-59 | -8.615850e-47 |
| Msa0621490 | Msa1173140 | 0.827500 | 1.511997e-54 | -8.615850e-47 |
| Msa0631350 | Msa1173140 | 0.803919 | 2.770582e-49 | -8.615850e-47 |
| Msa0632870 | Msa1173140 | 0.818822 | 1.604011e-52 | -8.615850e-47 |
| Msa0636070 | Msa1173140 | 0.820796 | 5.675493e-53 | -8.615850e-47 |
| Msa0641670 | Msa1173140 | 0.822422 | 2.388966e-53 | -8.615850e-47 |
| Msa0643560 | Msa1173140 | 0.802728 | 4.887324e-49 | -8.615850e-47 |
| Msa0649350 | Msa1173140 | 0.814781 | 1.293502e-51 | -8.615850e-47 |
| Msa0660490 | Msa1173140 | 0.811087 | 8.344546e-51 | -8.615850e-47 |
| Msa0661190 | Msa1173140 | -0.819947 | 8.887752e-53 | -8.615850e-47 |
| Msa0661210 | Msa1173140 | 0.846846 | 1.680089e-59 | -8.615850e-47 |
| Msa0671740 | Msa1173140 | 0.800614 | 1.327017e-48 | -8.615850e-47 |
| Msa0675410 | Msa1173140 | 0.820099 | 8.203274e-53 | -8.615850e-47 |
| Msa0688960 | Msa1173140 | 0.834047 | 3.755929e-56 | -8.615850e-47 |
| Msa0691900 | Msa1173140 | 0.828249 | 9.984513e-55 | -8.615850e-47 |
| Msa0692830 | Msa1173140 | 0.848948 | 4.425069e-60 | -8.615850e-47 |
| Msa0692950 | Msa1173140 | 0.852719 | 3.839376e-61 | -8.615850e-47 |
| Msa0698540 | Msa1173140 | 0.812080 | 5.074659e-51 | -8.615850e-47 |
| Msa0701920 | Msa1173140 | 0.820877 | 5.437614e-53 | -8.615850e-47 |
| Msa0716840 | Msa1173140 | 0.849189 | 3.793081e-60 | -8.615850e-47 |
| Msa0717230 | Msa1173140 | -0.819519 | 1.113288e-52 | -8.615850e-47 |
| Msa0737600 | Msa1173140 | 0.820914 | 5.331920e-53 | -8.615850e-47 |
| Msa0743720 | Msa1173140 | 0.816106 | 6.559312e-52 | -8.615850e-47 |
| Msa0745790 | Msa1173140 | 0.814158 | 1.776254e-51 | -8.615850e-47 |
| Msa0771720 | Msa1173140 | 0.802674 | 5.016431e-49 | -8.615850e-47 |
| Msa0772480 | Msa1173140 | 0.800728 | 1.257525e-48 | -8.615850e-47 |
| Msa0784860 | Msa1173140 | 0.828716 | 7.700300e-55 | -8.615850e-47 |
| Msa0795920 | Msa1173140 | 0.817501 | 3.192102e-52 | -8.615850e-47 |
| Msa0798440 | Msa1173140 | 0.813665 | 2.281446e-51 | -8.615850e-47 |
| Msa0799680 | Msa1173140 | -0.806530 | 7.867202e-50 | -8.615850e-47 |
| Msa0804230 | Msa1173140 | 0.805454 | 1.324478e-49 | -8.615850e-47 |
| Msa0808080 | Msa1173140 | 0.805557 | 1.260193e-49 | -8.615850e-47 |
| Msa0808270 | Msa1173140 | 0.833515 | 5.101094e-56 | -8.615850e-47 |
| Msa0812570 | Msa1173140 | 0.811106 | 8.264268e-51 | -8.615850e-47 |
| Msa0813720 | Msa1173140 | 0.805210 | 1.489769e-49 | -8.615850e-47 |
| Msa0813740 | Msa1173140 | 0.801936 | 7.115099e-49 | -8.615850e-47 |
| Msa0831870 | Msa1173140 | 0.806556 | 7.766754e-50 | -8.615850e-47 |
| Msa0842210 | Msa1173140 | 0.802789 | 4.749037e-49 | -8.615850e-47 |
| Msa0128020 | Msa1173140 | 0.815063 | 1.119858e-51 | -8.615850e-47 |
| Msa0129190 | Msa1173140 | -0.801100 | 1.055750e-48 | -8.615850e-47 |
| Msa0138630 | Msa1173140 | 0.818615 | 1.787568e-52 | -8.615850e-47 |
| Msa0140650 | Msa1173140 | 0.803939 | 2.743364e-49 | -8.615850e-47 |
| Msa0145730 | Msa1173140 | 0.834969 | 2.204250e-56 | -8.615850e-47 |
| Msa0150820 | Msa1173140 | 0.812071 | 5.098568e-51 | -8.615850e-47 |
| Msa0159180 | Msa1173140 | 0.837019 | 6.651273e-57 | -8.615850e-47 |
| Msa0159220 | Msa1173140 | 0.821779 | 3.367754e-53 | -8.615850e-47 |
| Msa0160550 | Msa1173140 | 0.842621 | 2.311831e-58 | -8.615850e-47 |
| Msa0162130 | Msa1173140 | 0.808272 | 3.359989e-50 | -8.615850e-47 |
| Msa0165220 | Msa1173140 | 0.801866 | 7.355909e-49 | -8.615850e-47 |
| Msa0165660 | Msa1173140 | 0.809871 | 1.527040e-50 | -8.615850e-47 |
| Msa0172070 | Msa1173140 | 0.807589 | 4.695017e-50 | -8.615850e-47 |
| Msa0193120 | Msa1173140 | 0.800573 | 1.352520e-48 | -8.615850e-47 |
| Msa0217680 | Msa1173140 | 0.803782 | 2.958267e-49 | -8.615850e-47 |
| Msa0222890 | Msa1173140 | 0.800338 | 1.510096e-48 | -8.615850e-47 |
| Msa0366890 | Msa1173140 | 0.815724 | 7.984378e-52 | -8.615850e-47 |
| Msa0372340 | Msa1173140 | 0.807904 | 4.023987e-50 | -8.615850e-47 |
| Msa0374750 | Msa1173140 | 0.831505 | 1.607175e-55 | -8.615850e-47 |
| Msa0379160 | Msa1173140 | 0.816309 | 5.908602e-52 | -8.615850e-47 |
| Msa0383800 | Msa1173140 | 0.837596 | 4.734193e-57 | -8.615850e-47 |
| Msa0385580 | Msa1173140 | 0.806507 | 7.956676e-50 | -8.615850e-47 |
| Msa0388050 | Msa1173140 | 0.833036 | 6.716799e-56 | -8.615850e-47 |
| Msa0397540 | Msa1173140 | 0.835341 | 1.775838e-56 | -8.615850e-47 |
| Msa0398950 | Msa1173140 | 0.812092 | 5.044558e-51 | -8.615850e-47 |
| Msa0399340 | Msa1173140 | 0.807812 | 4.210846e-50 | -8.615850e-47 |
| Msa0402790 | Msa1173140 | 0.805290 | 1.433368e-49 | -8.615850e-47 |
| Msa0424040 | Msa1173140 | 0.818292 | 2.115454e-52 | -8.615850e-47 |
| Msa0431880 | Msa1173140 | 0.804623 | 1.976570e-49 | -8.615850e-47 |
| Msa0434180 | Msa1173140 | 0.810788 | 9.682744e-51 | -8.615850e-47 |
| Msa0442190 | Msa1173140 | 0.814215 | 1.725529e-51 | -8.615850e-47 |
| Msa0442200 | Msa1173140 | 0.821434 | 4.045721e-53 | -8.615850e-47 |
| Msa0477080 | Msa1173140 | 0.826823 | 2.195137e-54 | -8.615850e-47 |
| Msa0982430 | Msa1173140 | 0.831285 | 1.820840e-55 | -8.615850e-47 |
| Msa0987370 | Msa1173140 | 0.801895 | 7.255821e-49 | -8.615850e-47 |
| Msa0999970 | Msa1173140 | 0.806865 | 6.684196e-50 | -8.615850e-47 |
| Msa1009820 | Msa1173140 | 0.826841 | 2.173747e-54 | -8.615850e-47 |
| Msa1012830 | Msa1173140 | 0.846264 | 2.422318e-59 | -8.615850e-47 |
| Msa1021540 | Msa1173140 | 0.823465 | 1.365414e-53 | -8.615850e-47 |
| Msa1030620 | Msa1173140 | 0.801226 | 9.949334e-49 | -8.615850e-47 |
| Msa1037420 | Msa1173140 | 0.848798 | 4.870095e-60 | -8.615850e-47 |
| Msa1046020 | Msa1173140 | 0.814229 | 1.713638e-51 | -8.615850e-47 |
| Msa1046060 | Msa1173140 | 0.820176 | 7.876348e-53 | -8.615850e-47 |
| Msa1051200 | Msa1173140 | 0.854800 | 9.666958e-62 | -8.615850e-47 |
| Msa1087710 | Msa1173140 | 0.811355 | 7.296187e-51 | -8.615850e-47 |
| Msa1105530 | Msa1173140 | 0.808947 | 2.411325e-50 | -8.615850e-47 |
| Msa0241390 | Msa1173140 | 0.810490 | 1.123440e-50 | -8.615850e-47 |
| Msa0255080 | Msa1173140 | 0.835078 | 2.068490e-56 | -8.615850e-47 |
| Msa0259370 | Msa1173140 | 0.819226 | 1.298309e-52 | -8.615850e-47 |
| Msa0262310 | Msa1173140 | 0.822093 | 2.848855e-53 | -8.615850e-47 |
| Msa0267310 | Msa1173140 | 0.808725 | 2.689757e-50 | -8.615850e-47 |
| Msa0279220 | Msa1173140 | 0.823078 | 1.680982e-53 | -8.615850e-47 |
| Msa0279240 | Msa1173140 | 0.821215 | 4.546096e-53 | -8.615850e-47 |
| Msa0280090 | Msa1173140 | 0.800381 | 1.479914e-48 | -8.615850e-47 |
| Msa0289250 | Msa1173140 | 0.806299 | 8.801495e-50 | -8.615850e-47 |
| Msa0298700 | Msa1173140 | 0.817606 | 3.023015e-52 | -8.615850e-47 |
| Msa0309770 | Msa1173140 | 0.848287 | 6.747401e-60 | -8.615850e-47 |
| Msa0318980 | Msa1173140 | 0.826929 | 2.071426e-54 | -8.615850e-47 |
| Msa0337240 | Msa1173140 | 0.805100 | 1.571419e-49 | -8.615850e-47 |
| Msa0345350 | Msa1173140 | 0.832876 | 7.359460e-56 | -8.615850e-47 |
| Msa0345390 | Msa1173140 | 0.824227 | 9.046056e-54 | -8.615850e-47 |
| Msa0358170 | Msa1173140 | 0.807532 | 4.827003e-50 | -8.615850e-47 |
| Msa1123810 | Msa1173140 | 0.827060 | 1.926894e-54 | -8.615850e-47 |
| Msa1137700 | Msa1173140 | 0.842145 | 3.091521e-58 | -8.615850e-47 |
| Msa1171870 | Msa1173140 | 0.815577 | 8.609885e-52 | -8.615850e-47 |
| Msa1173140 | Msa1174040 | 0.815741 | 7.912453e-52 | -8.615850e-47 |
| Msa1173140 | Msa1181250 | 0.805622 | 1.221596e-49 | -8.615850e-47 |
| Msa1173140 | Msa1188070 | 0.813389 | 2.623747e-51 | -8.615850e-47 |
| Msa1173140 | Msa1190930 | 0.802759 | 4.816382e-49 | -8.615850e-47 |
| Msa1173140 | Msa1201240 | 0.816040 | 6.786925e-52 | -8.615850e-47 |
| Msa1173140 | Msa1203250 | 0.811586 | 6.501552e-51 | -8.615850e-47 |
| Msa1173140 | Msa1204090 | 0.802887 | 4.531523e-49 | -8.615850e-47 |
| Msa1173140 | Msa1204250 | 0.802177 | 6.348005e-49 | -8.615850e-47 |
| Msa1173140 | Msa1206670 | 0.806277 | 8.895959e-50 | -8.615850e-47 |
| Msa1173140 | Msa1231840 | 0.807688 | 4.472166e-50 | -8.615850e-47 |
| Msa1173140 | Msa1244610 | 0.808068 | 3.714489e-50 | -8.615850e-47 |
| Msa1173140 | Msa1253020 | 0.806804 | 6.884904e-50 | -8.615850e-47 |
| Msa1173140 | Msa1280320 | 0.820220 | 7.696236e-53 | -8.615850e-47 |
| Msa1173140 | Msa1280340 | 0.806018 | 1.008318e-49 | -8.615850e-47 |
| Msa1173140 | Msa1306430 | 0.813297 | 2.748748e-51 | -8.615850e-47 |
| Msa1173140 | Msa1306860 | 0.800335 | 1.512686e-48 | -8.615850e-47 |
| Msa1173140 | Msa1312520 | 0.802051 | 6.738954e-49 | -8.615850e-47 |
| Msa1173140 | Msa1322490 | 0.816364 | 5.745255e-52 | -8.615850e-47 |
| Msa1173140 | Msa1333110 | 0.801052 | 1.079807e-48 | -8.615850e-47 |
| Msa1173140 | Msa1358610 | -0.803418 | 3.519974e-49 | -8.615850e-47 |
| Msa1173140 | Msa1359630 | 0.836127 | 1.122592e-56 | -8.615850e-47 |
| Msa1173140 | Msa1361520 | 0.827293 | 1.694463e-54 | -8.615850e-47 |
| Msa1173140 | Msa1385770 | 0.842308 | 2.798609e-58 | -8.615850e-47 |
| Msa1173140 | Msa1386780 | 0.813541 | 2.429299e-51 | -8.615850e-47 |
| Msa1173140 | Msa1390180 | 0.823980 | 1.034099e-53 | -8.615850e-47 |
| Msa1173140 | Msa1392200 | 0.810956 | 8.908311e-51 | -8.615850e-47 |
| Msa1173140 | Msa1394290 | 0.802844 | 4.626407e-49 | -8.615850e-47 |
| Msa1173140 | Msa1400190 | 0.806527 | 7.877434e-50 | -8.615850e-47 |
| Msa1173140 | Msa1403680 | 0.827593 | 1.436270e-54 | -8.615850e-47 |
| Msa1173140 | Msa1409240 | 0.841815 | 3.780226e-58 | -8.615850e-47 |
| Msa1173140 | Msa1410100 | 0.817366 | 3.423560e-52 | -8.615850e-47 |
| Msa1173140 | Msa1412890 | 0.815337 | 9.734493e-52 | -8.615850e-47 |
| Msa1173140 | Msa1426030 | 0.806502 | 7.973811e-50 | -8.615850e-47 |
| Msa1173140 | Msa1432400 | 0.814499 | 1.493491e-51 | -8.615850e-47 |
| Msa1173140 | Msa1434140 | 0.843688 | 1.201719e-58 | -8.615850e-47 |
| Msa1173140 | Msa1435370 | 0.841767 | 3.891184e-58 | -8.615850e-47 |
| Msa1173140 | Msa1440910 | 0.834642 | 2.662971e-56 | -8.615850e-47 |
| Msa1173140 | Msa1451550 | 0.800028 | 1.746048e-48 | -8.615850e-47 |
| Msa1173140 | Msa1453780 | -0.802377 | 5.773838e-49 | -8.615850e-47 |
| Msa1173140 | Msa1454480 | 0.821999 | 2.994686e-53 | -8.615850e-47 |
| Msa1173140 | Msa1455490 | 0.803360 | 3.619007e-49 | -8.615850e-47 |
| Msa1173140 | Msa1464830 | 0.807773 | 4.290448e-50 | -8.615850e-47 |
| Msa1173140 | Msa1465960 | 0.802557 | 5.301272e-49 | -8.615850e-47 |
| Msa1173140 | Msa1466300 | 0.805507 | 1.290859e-49 | -8.615850e-47 |
| Msa0487800 | Msa1173140 | 0.802980 | 4.335614e-49 | -8.615850e-47 |
| Msa0500360 | Msa1173140 | 0.802920 | 4.461231e-49 | -8.615850e-47 |
| Msa0502880 | Msa1173140 | 0.802770 | 4.790671e-49 | -8.615850e-47 |
| Msa0504020 | Msa1173140 | 0.807876 | 4.079254e-50 | -8.615850e-47 |
| Msa0510350 | Msa1173140 | 0.810500 | 1.117889e-50 | -8.615850e-47 |
| Msa0520750 | Msa1173140 | 0.823764 | 1.161973e-53 | -8.615850e-47 |
| Msa0534900 | Msa1173140 | 0.820027 | 8.519304e-53 | -8.615850e-47 |
| Msa0541360 | Msa1173140 | 0.831241 | 1.866248e-55 | -8.615850e-47 |
| Msa0541410 | Msa1173140 | 0.809903 | 1.502919e-50 | -8.615850e-47 |
| Msa0553220 | Msa1173140 | -0.804804 | 1.811544e-49 | -8.615850e-47 |
| Msa0555450 | Msa1173140 | 0.806887 | 6.611102e-50 | -8.615850e-47 |
| Msa0568910 | Msa1173140 | 0.800323 | 1.521234e-48 | -8.615850e-47 |
| Msa0584860 | Msa1173140 | 0.809853 | 1.540550e-50 | -8.615850e-47 |
| Msa0592440 | Msa1173140 | 0.800685 | 1.283170e-48 | -8.615850e-47 |
| Msa0593650 | Msa1173140 | 0.826536 | 2.570845e-54 | -8.615850e-47 |
| Msa0602390 | Msa1173140 | 0.842046 | 3.283092e-58 | -8.615850e-47 |
| Msa0847770 | Msa1173140 | 0.807032 | 6.162900e-50 | -8.615850e-47 |
| Msa0849030 | Msa1173140 | 0.816851 | 4.469269e-52 | -8.615850e-47 |
| Msa0858180 | Msa1173140 | 0.802856 | 4.599281e-49 | -8.615850e-47 |
| Msa0866550 | Msa1173140 | 0.818504 | 1.893407e-52 | -8.615850e-47 |
| Msa0909110 | Msa1173140 | 0.803118 | 4.060681e-49 | -8.615850e-47 |
| Msa0927260 | Msa1173140 | 0.809358 | 1.968688e-50 | -8.615850e-47 |
| Msa0938220 | Msa1173140 | 0.808750 | 2.656250e-50 | -8.615850e-47 |
| Msa0942070 | Msa1173140 | 0.805861 | 1.088030e-49 | -8.615850e-47 |
| Msa0944190 | Msa1173140 | 0.802341 | 5.873901e-49 | -8.615850e-47 |
| Msa0945970 | Msa1173140 | 0.807701 | 4.444515e-50 | -8.615850e-47 |
| Msa0969810 | Msa1173140 | 0.800158 | 1.642974e-48 | -8.615850e-47 |
| Msa0976670 | Msa1173140 | 0.800155 | 1.645727e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173140 | MtrunA17_Chr1g0152361 | 95.767 | 378 | 16 | 0 | 173 | 550 | 4 | 381 | 0.0 | 738 |
| Msa1173140 | MtrunA17_Chr1g0152361 | 32.093 | 215 | 121 | 7 | 61 | 258 | 3 | 209 | 4.10e-17 | 83.6 |
| Msa1173140 | MtrunA17_Chr7g0234801 | 53.333 | 525 | 235 | 6 | 24 | 542 | 20 | 540 | 0.0 | 533 |
| Msa1173140 | MtrunA17_Chr8g0377771 | 51.103 | 544 | 255 | 5 | 23 | 561 | 23 | 560 | 0.0 | 532 |
| Msa1173140 | MtrunA17_Chr8g0339141 | 53.396 | 530 | 237 | 5 | 24 | 546 | 26 | 552 | 7.32e-178 | 514 |
| Msa1173140 | MtrunA17_Chr7g0255551 | 41.406 | 512 | 287 | 6 | 37 | 542 | 19 | 523 | 1.14e-132 | 397 |
| Msa1173140 | MtrunA17_Chr7g0255551 | 31.667 | 240 | 141 | 5 | 32 | 258 | 130 | 359 | 4.44e-25 | 109 |
| Msa1173140 | MtrunA17_Chr1g0152351 | 95.930 | 172 | 7 | 0 | 1 | 172 | 25 | 196 | 1.68e-102 | 308 |
| Msa1173140 | MtrunA17_Chr8g0352971 | 47.181 | 337 | 162 | 7 | 54 | 380 | 14 | 344 | 1.88e-90 | 285 |
| Msa1173140 | MtrunA17_Chr8g0352971 | 35.683 | 227 | 129 | 5 | 42 | 258 | 123 | 342 | 2.30e-25 | 108 |
| Msa1173140 | MtrunA17_Chr8g0338001 | 43.109 | 341 | 186 | 4 | 130 | 466 | 41 | 377 | 1.46e-84 | 270 |
| Msa1173140 | MtrunA17_Chr8g0338001 | 28.956 | 297 | 176 | 10 | 28 | 299 | 50 | 336 | 4.59e-19 | 89.7 |
| Msa1173140 | MtrunA17_Chr4g0027201 | 29.779 | 544 | 347 | 10 | 24 | 544 | 20 | 551 | 8.67e-57 | 201 |
| Msa1173140 | MtrunA17_Chr8g0338221 | 37.818 | 275 | 108 | 5 | 137 | 370 | 31 | 283 | 1.18e-46 | 165 |
| Msa1173140 | MtrunA17_Chr8g0336421 | 46.821 | 173 | 90 | 1 | 210 | 380 | 3 | 175 | 5.12e-43 | 160 |
| Msa1173140 | MtrunA17_Chr8g0336421 | 35.632 | 174 | 95 | 5 | 100 | 258 | 2 | 173 | 5.88e-22 | 99.0 |
| Msa1173140 | MtrunA17_Chr8g0338181 | 50.331 | 151 | 72 | 1 | 274 | 421 | 2 | 152 | 1.00e-41 | 147 |
| Msa1173140 | MtrunA17_Chr8g0338631 | 43.939 | 132 | 73 | 1 | 335 | 466 | 1 | 131 | 5.33e-32 | 120 |
| Msa1173140 | MtrunA17_Chr4g0019501 | 31.579 | 304 | 189 | 9 | 254 | 544 | 37 | 334 | 6.09e-29 | 118 |
| Msa1173140 | MtrunA17_Chr8g0338661 | 47.727 | 88 | 46 | 0 | 334 | 421 | 2 | 89 | 2.83e-23 | 94.4 |
| Msa1173140 | MtrunA17_Chr8g0345571 | 36.813 | 182 | 77 | 6 | 171 | 321 | 10 | 184 | 3.29e-22 | 94.7 |
| Msa1173140 | MtrunA17_Chr8g0338061 | 45.455 | 88 | 48 | 0 | 334 | 421 | 2 | 89 | 1.40e-21 | 89.7 |
| Msa1173140 | MtrunA17_Chr8g0338191 | 37.086 | 151 | 59 | 2 | 144 | 259 | 40 | 189 | 8.08e-21 | 90.5 |
| Msa1173140 | MtrunA17_Chr8g0339161 | 29.319 | 191 | 100 | 6 | 261 | 422 | 58 | 242 | 1.52e-14 | 73.9 |
| Msa1173140 | MtrunA17_Chr7g0237741 | 36.752 | 117 | 66 | 1 | 396 | 512 | 95 | 203 | 1.44e-12 | 68.2 |
| Msa1173140 | MtrunA17_Chr8g0374621 | 31.579 | 171 | 93 | 6 | 381 | 541 | 203 | 359 | 2.50e-11 | 65.5 |
| Msa1173140 | MtrunA17_Chr2g0323971 | 32.653 | 147 | 88 | 2 | 396 | 542 | 98 | 233 | 2.81e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173140 | AT3G25230.1 | 53.042 | 526 | 237 | 5 | 27 | 546 | 29 | 550 | 0.0 | 545 |
| Msa1173140 | AT3G25230.2 | 53.257 | 522 | 234 | 5 | 27 | 542 | 29 | 546 | 0.0 | 543 |
| Msa1173140 | AT5G48570.1 | 51.698 | 530 | 245 | 7 | 21 | 542 | 30 | 556 | 0.0 | 531 |
| Msa1173140 | AT1G58450.1 | 60.256 | 156 | 61 | 1 | 387 | 542 | 1 | 155 | 2.16e-58 | 192 |
| Msa1173140 | AT3G54010.1 | 30.361 | 527 | 324 | 11 | 42 | 541 | 36 | 546 | 1.29e-54 | 196 |
| Msa1173140 | AT3G54010.1 | 29.583 | 240 | 151 | 6 | 149 | 380 | 32 | 261 | 2.70e-16 | 82.8 |
| Msa1173140 | AT3G54010.2 | 30.917 | 469 | 285 | 10 | 96 | 541 | 4 | 456 | 9.03e-50 | 181 |
| Msa1173140 | AT3G21640.1 | 31.690 | 284 | 186 | 6 | 267 | 544 | 48 | 329 | 1.38e-28 | 117 |
| Msa1173140 | AT4G30480.2 | 33.333 | 180 | 88 | 5 | 388 | 564 | 97 | 247 | 6.43e-14 | 72.8 |
| Msa1173140 | AT5G21990.1 | 34.677 | 124 | 75 | 1 | 392 | 515 | 99 | 216 | 1.43e-11 | 67.8 |
Find 161 sgRNAs with CRISPR-Local
Find 424 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGAAAGTCATTCAGTTTA+AGG | 0.149462 | 8_1:+3321054 | None:intergenic |
| ACACAACAAACATTTATTTA+TGG | 0.165180 | 8_1:-3319345 | Msa1173140:three_prime_UTR |
| ATTAATATTACCTTTGTCTT+AGG | 0.223221 | 8_1:+3319958 | None:intergenic |
| GTTAGCAGAGATGGATCTTT+AGG | 0.231303 | 8_1:-3321143 | Msa1173140:CDS |
| ATACATCCCGATTATGCTTT+TGG | 0.235249 | 8_1:-3322064 | Msa1173140:CDS |
| AACATTTCCAAAAGCATAAT+CGG | 0.256443 | 8_1:+3322057 | None:intergenic |
| TTTGCTTGATGGAACCAAAT+TGG | 0.257054 | 8_1:-3324651 | Msa1173140:CDS |
| AGAGGATGGGGTGGTGAAAA+TGG | 0.273488 | 8_1:-3319527 | Msa1173140:CDS |
| GTCATAGTCATGATCACTTT+TGG | 0.278066 | 8_1:+3323241 | None:intergenic |
| ATCGGGATGTATACTGATTA+TGG | 0.284749 | 8_1:+3322075 | None:intergenic |
| ATCCCTAGCAGAACCCAATT+TGG | 0.291995 | 8_1:+3324637 | None:intergenic |
| CGCAAAGATGGCAGTGTTAT+CGG | 0.294603 | 8_1:-3324959 | Msa1173140:exon |
| TGCCACCTCTCCTTTCTTCA+TGG | 0.300367 | 8_1:+3323847 | None:intergenic |
| TGGAATTATCAAGAAAATTA+TGG | 0.305364 | 8_1:-3323708 | Msa1173140:CDS |
| TTGAGGTGGAACTCGTTTCT+TGG | 0.318251 | 8_1:-3323760 | Msa1173140:CDS |
| TATGACAAACTCCTAATCTT+TGG | 0.329131 | 8_1:-3319319 | Msa1173140:three_prime_UTR |
| TCTGTAGAACAAGTGATTAC+TGG | 0.347109 | 8_1:-3322139 | Msa1173140:intron |
| TGCAACTATAGTGAAGTATC+AGG | 0.359533 | 8_1:-3323463 | Msa1173140:intron |
| TATGTTGGAACTTTGCTTGA+TGG | 0.362150 | 8_1:-3324662 | Msa1173140:CDS |
| AAGCCTGTCATAAATGTTAC+TGG | 0.362601 | 8_1:-3322945 | Msa1173140:CDS |
| TGGTGTATGTAGATGCCTTT+GGG | 0.374569 | 8_1:-3323052 | Msa1173140:intron |
| TTAGCAGAGATGGATCTTTA+GGG | 0.377376 | 8_1:-3321142 | Msa1173140:CDS |
| TTGCTTGATGGAACCAAATT+GGG | 0.378964 | 8_1:-3324650 | Msa1173140:CDS |
| ACATTACCTTCTGTTGTGTC+TGG | 0.381352 | 8_1:-3323818 | Msa1173140:CDS |
| CTTAAACTGAATGACTTTCC+TGG | 0.382468 | 8_1:-3321053 | Msa1173140:CDS |
| TAGAAGCATTTAAAGTATAC+AGG | 0.384628 | 8_1:+3319438 | None:intergenic |
| GATGGTAGCTGCATAAATTT+CGG | 0.391326 | 8_1:-3319387 | Msa1173140:three_prime_UTR |
| TTAAAGTATACAGGTTCAAC+AGG | 0.393822 | 8_1:+3319447 | None:intergenic |
| GGAGATAAAAGAAGATGAAC+TGG | 0.402641 | 8_1:-3324938 | Msa1173140:CDS |
| AAGAAGAAGCTTCTCAAAAT+CGG | 0.406416 | 8_1:-3324832 | Msa1173140:CDS |
| GTGGTGTATGTAGATGCCTT+TGG | 0.406796 | 8_1:-3323053 | Msa1173140:intron |
| CGTAACATTTGCACCCTCAT+TGG | 0.412458 | 8_1:+3322869 | None:intergenic |
| GGGGAGAAGGGGAGTGAAGC+TGG | 0.417002 | 8_1:-3323032 | Msa1173140:CDS |
| TGGGGTGGTGAAAATGGAAA+TGG | 0.423574 | 8_1:-3319521 | Msa1173140:CDS |
| TATATACAATATGTAATAGA+TGG | 0.423761 | 8_1:-3319405 | Msa1173140:three_prime_UTR |
| GTAACATGATCGTTGAAGTT+GGG | 0.436434 | 8_1:+3324793 | None:intergenic |
| CTTTAAATGCTTCTAACAAA+AGG | 0.438201 | 8_1:-3319430 | Msa1173140:three_prime_UTR |
| CAATGAGGGTGCAAATGTTA+CGG | 0.438397 | 8_1:-3322868 | Msa1173140:CDS |
| ATCAAGAAAATTATGGAGAA+GGG | 0.440426 | 8_1:-3323701 | Msa1173140:CDS |
| GCTCCATGTTAATATTGAAT+TGG | 0.441324 | 8_1:-3322976 | Msa1173140:CDS |
| AATGAGGGTGCAAATGTTAC+GGG | 0.443135 | 8_1:-3322867 | Msa1173140:intron |
| TCTCAAAATCGGACACGGTT+GGG | 0.446035 | 8_1:-3324821 | Msa1173140:CDS |
| ATGTTGTTCGTCCAAAGATT+AGG | 0.446225 | 8_1:+3319308 | None:intergenic |
| TGTTCTCAAGCAGAGATTGA+AGG | 0.449530 | 8_1:-3319560 | Msa1173140:intron |
| GGAAATTTATTATTTAAAAG+TGG | 0.450903 | 8_1:-3321309 | Msa1173140:CDS |
| CTCATCGGTTACAAATTTCA+AGG | 0.451255 | 8_1:+3322277 | None:intergenic |
| TTAAGAAGATTATTAAAGAA+GGG | 0.454632 | 8_1:-3322908 | Msa1173140:CDS |
| TCTTCATTGTTGCCACTGCT+CGG | 0.459281 | 8_1:+3322110 | None:intergenic |
| AACATTTATGACAGGCTTGA+AGG | 0.460983 | 8_1:+3322950 | None:intergenic |
| CAACTCGGTTGTGCAATTTG+AGG | 0.461614 | 8_1:-3323777 | Msa1173140:CDS |
| ATTAAGAAGATTATTAAAGA+AGG | 0.463062 | 8_1:-3322909 | Msa1173140:CDS |
| GTGGTGGATGTTTGCAAAGA+TGG | 0.463377 | 8_1:-3323731 | Msa1173140:CDS |
| CTCAAAAGCTCGGCGAAGAA+AGG | 0.465629 | 8_1:-3324879 | Msa1173140:CDS |
| GCGAAAACTCTATCTGTGTA+TGG | 0.468243 | 8_1:+3324979 | None:intergenic |
| TAGAATTCAACTCCTCCTTC+CGG | 0.473527 | 8_1:+3323405 | None:intergenic |
| GCTGATTCGATGACTTCGCC+TGG | 0.474604 | 8_1:+3324907 | None:intergenic |
| TTGAGAAGCTTCTTCTTGAT+CGG | 0.478508 | 8_1:+3324838 | None:intergenic |
| CTTCTTCTTGATCGGCGAGT+TGG | 0.483947 | 8_1:+3324846 | None:intergenic |
| TTGAAATTTGTAACCGATGA+GGG | 0.487322 | 8_1:-3322275 | Msa1173140:intron |
| AGGTTGAGAAAGAAGAGGAT+GGG | 0.490164 | 8_1:-3319540 | Msa1173140:CDS |
| CGTTTCTTGGATCACGGTGG+TGG | 0.490362 | 8_1:-3323747 | Msa1173140:CDS |
| TTGAGGTGGATCCACAAAAC+AGG | 0.492021 | 8_1:-3320159 | Msa1173140:intron |
| AAGGGGAGTGAAGCTGGCAG+CGG | 0.494246 | 8_1:-3323026 | Msa1173140:CDS |
| TGTAGATGCCTTTGGGGAGA+AGG | 0.495613 | 8_1:-3323045 | Msa1173140:intron |
| GTACATAGTTTGATTGCTCC+AGG | 0.496125 | 8_1:+3321035 | None:intergenic |
| TTAACATGGAGCATTGAGTC+TGG | 0.496455 | 8_1:+3322987 | None:intergenic |
| AAGGTTGAGAAAGAAGAGGA+TGG | 0.498928 | 8_1:-3319541 | Msa1173140:CDS |
| ACATTTCCAAAAGCATAATC+GGG | 0.500114 | 8_1:+3322058 | None:intergenic |
| AGTAACATGATCGTTGAAGT+TGG | 0.501257 | 8_1:+3324792 | None:intergenic |
| AGCAGTGGCAACAATGAAGA+AGG | 0.504681 | 8_1:-3322107 | Msa1173140:CDS |
| TCATTACTATTTAACTCCCA+TGG | 0.504757 | 8_1:+3321366 | None:intergenic |
| GGTTGAGAAAGAAGAGGATG+GGG | 0.505171 | 8_1:-3319539 | Msa1173140:CDS |
| ATGCATGCAGTTCATTATGT+TGG | 0.505277 | 8_1:-3324677 | Msa1173140:intron |
| GCAAAAGCATATATAGAGAC+AGG | 0.506388 | 8_1:-3320220 | Msa1173140:CDS |
| TTCTCAAAATCGGACACGGT+TGG | 0.506403 | 8_1:-3324822 | Msa1173140:CDS |
| TATCAAGAAAATTATGGAGA+AGG | 0.506761 | 8_1:-3323702 | Msa1173140:CDS |
| AGGGGAGTGAAGCTGGCAGC+GGG | 0.512660 | 8_1:-3323025 | Msa1173140:CDS |
| GGGGTGGTGAAAATGGAAAT+GGG | 0.512681 | 8_1:-3319520 | Msa1173140:CDS |
| TGGATCTTTAGGGGATGATG+AGG | 0.513068 | 8_1:-3321132 | Msa1173140:CDS |
| GAACCAAATTGGGTTCTGCT+AGG | 0.513359 | 8_1:-3324640 | Msa1173140:CDS |
| AGGTGAATTGTATGCTGGAT+TGG | 0.515445 | 8_1:-3323885 | Msa1173140:CDS |
| CTCAAATTGCACAACCGAGT+TGG | 0.515506 | 8_1:+3323778 | None:intergenic |
| GACAGCGCAGCTCCTTCTGA+TGG | 0.517117 | 8_1:-3319487 | Msa1173140:CDS |
| TAAGAAGATTATTAAAGAAG+GGG | 0.517723 | 8_1:-3322907 | Msa1173140:CDS |
| AAAATTATGGAGAAGGGGAA+AGG | 0.523585 | 8_1:-3323695 | Msa1173140:CDS |
| GCTGGGAGGAAGAAAGAAGA+AGG | 0.524602 | 8_1:-3321330 | Msa1173140:CDS |
| AACAATGAAGAAGGGTGAAA+GGG | 0.524996 | 8_1:-3322098 | Msa1173140:CDS |
| AGCAGCGAAGAAGTATGATA+AGG | 0.525722 | 8_1:-3321274 | Msa1173140:intron |
| TAACATGATCGTTGAAGTTG+GGG | 0.527154 | 8_1:+3324794 | None:intergenic |
| GTGATAGGTGAATTGTATGC+TGG | 0.527463 | 8_1:-3323890 | Msa1173140:intron |
| TTGTATGCTGGATTGGATGA+TGG | 0.531924 | 8_1:-3323878 | Msa1173140:CDS |
| GTAGATGCCTTTGGGGAGAA+GGG | 0.532024 | 8_1:-3323044 | Msa1173140:intron |
| GAAGATTATTAAAGAAGGGG+AGG | 0.532650 | 8_1:-3322904 | Msa1173140:CDS |
| GGAATCGTCACCATGAAGAA+AGG | 0.533318 | 8_1:-3323857 | Msa1173140:CDS |
| AACCAAATTGGGTTCTGCTA+GGG | 0.534151 | 8_1:-3324639 | Msa1173140:CDS |
| AGCGCAGCTCCTTCTGATGG+CGG | 0.535316 | 8_1:-3319484 | Msa1173140:CDS |
| AAAATTAAACCGCCATCAGA+AGG | 0.538652 | 8_1:+3319475 | None:intergenic |
| AGTAGTGTATGACATTGAAA+TGG | 0.540195 | 8_1:-3321993 | Msa1173140:CDS |
| CACTGTTGTTGCAGAAACTC+CGG | 0.541555 | 8_1:-3323424 | Msa1173140:CDS |
| TATCAGGTGGCACTTGAAGA+TGG | 0.545537 | 8_1:-3323447 | Msa1173140:CDS |
| TGAGAAAGAAGAGGATGGGG+TGG | 0.548915 | 8_1:-3319536 | Msa1173140:CDS |
| AAATTATGGAGAAGGGGAAA+GGG | 0.550984 | 8_1:-3323694 | Msa1173140:CDS |
| AAAATGGAAATGGGCAATGT+TGG | 0.553546 | 8_1:-3319511 | Msa1173140:CDS |
| CTCGGTTGTGCAATTTGAGG+TGG | 0.556739 | 8_1:-3323774 | Msa1173140:CDS |
| AATCGTTGAGAGTTTCATGC+TGG | 0.559876 | 8_1:-3321097 | Msa1173140:CDS |
| TTCACTCCCCTTCTCCCCAA+AGG | 0.560275 | 8_1:+3323037 | None:intergenic |
| TTTCGGATGAAAGTCTTACA+TGG | 0.563583 | 8_1:-3319370 | Msa1173140:three_prime_UTR |
| TACACAGCTATGCTAGAAGA+TGG | 0.564478 | 8_1:-3322338 | Msa1173140:CDS |
| AAGGACTTCATCAAGATCAC+CGG | 0.570891 | 8_1:+3323661 | None:intergenic |
| CAACAATGAAGAAGGGTGAA+AGG | 0.574124 | 8_1:-3322099 | Msa1173140:CDS |
| AAGATTATTAAAGAAGGGGA+GGG | 0.574208 | 8_1:-3322903 | Msa1173140:CDS |
| GGTGATCTTGATGAAGTCCT+TGG | 0.574730 | 8_1:-3323659 | Msa1173140:intron |
| GGAACTCGTTTCTTGGATCA+CGG | 0.577330 | 8_1:-3323753 | Msa1173140:CDS |
| GATGAACTGGATGAAGAACC+AGG | 0.578061 | 8_1:-3324925 | Msa1173140:CDS |
| TATGTTTGCACCTAAGACAA+AGG | 0.578769 | 8_1:-3319968 | Msa1173140:intron |
| ATTGAAGGTTGAGAAAGAAG+AGG | 0.580336 | 8_1:-3319545 | Msa1173140:CDS |
| AAGAATATACTCACCCTCAT+CGG | 0.581459 | 8_1:+3322262 | None:intergenic |
| TGTCCAAGAGAAAATGTGAC+AGG | 0.582221 | 8_1:+3324605 | None:intergenic |
| TCATCGGTTACAAATTTCAA+GGG | 0.583118 | 8_1:+3322278 | None:intergenic |
| AATAATCTTCTTAATCACCA+TGG | 0.585362 | 8_1:+3322917 | None:intergenic |
| TCACCAGTAACATTTATGAC+AGG | 0.588648 | 8_1:+3322942 | None:intergenic |
| TTCATAGGAGAAAGCACCAT+GGG | 0.589750 | 8_1:-3321382 | Msa1173140:intron |
| TCAAGAAAATTATGGAGAAG+GGG | 0.591587 | 8_1:-3323700 | Msa1173140:CDS |
| GTTGAATTCTATGTGAATGA+TGG | 0.593431 | 8_1:-3323393 | Msa1173140:intron |
| AGTGTATGACATTGAAATGG+TGG | 0.597567 | 8_1:-3321990 | Msa1173140:CDS |
| AGCAATCAAACTATGTACTC+AGG | 0.602316 | 8_1:-3321030 | Msa1173140:intron |
| AAATGTTACTGGTGACTCCA+TGG | 0.602785 | 8_1:-3322934 | Msa1173140:CDS |
| AGAGTTTCATGCTGGTTGAA+CGG | 0.605134 | 8_1:-3321089 | Msa1173140:CDS |
| GGTGCTTTCACAGCCAATGA+GGG | 0.605431 | 8_1:-3322882 | Msa1173140:CDS |
| TAGATGCCTTTGGGGAGAAG+GGG | 0.606372 | 8_1:-3323043 | Msa1173140:CDS |
| AGACATCAAGAAAGCTCTTG+AGG | 0.606805 | 8_1:-3320176 | Msa1173140:CDS |
| ACATGGAGCATTGAGTCTGG+TGG | 0.608526 | 8_1:+3322990 | None:intergenic |
| GTGGATGTTTGCAAAGATGG+TGG | 0.611915 | 8_1:-3323728 | Msa1173140:CDS |
| AGTGATCATGACTATGACAA+GGG | 0.614434 | 8_1:-3323236 | Msa1173140:CDS |
| TTGAGTCTGGTGGAATTGAA+CGG | 0.618484 | 8_1:+3323000 | None:intergenic |
| ACAACCGAGTTGGAGTCTTG+TGG | 0.620681 | 8_1:+3323788 | None:intergenic |
| TCAGCACCACCTCAAAAGCT+CGG | 0.625877 | 8_1:-3324889 | Msa1173140:CDS |
| TAGCAGAGATGGATCTTTAG+GGG | 0.626024 | 8_1:-3321141 | Msa1173140:CDS |
| CACCATGAAGAAAGGAGAGG+TGG | 0.628946 | 8_1:-3323849 | Msa1173140:CDS |
| CATCAAGAAAGCTCTTGAGG+TGG | 0.629058 | 8_1:-3320173 | Msa1173140:CDS |
| GGGTGCTTTCACAGCCAATG+AGG | 0.631209 | 8_1:-3322883 | Msa1173140:CDS |
| GCAGTGGCAACAATGAAGAA+GGG | 0.633974 | 8_1:-3322106 | Msa1173140:CDS |
| GATCTTGCTATTGTGCCACC+AGG | 0.635625 | 8_1:-3322022 | Msa1173140:CDS |
| TACTGGTTTAGACCGAGCAG+TGG | 0.636057 | 8_1:-3322122 | Msa1173140:CDS |
| GTTGCAGAAACTCCGGAAGG+AGG | 0.643747 | 8_1:-3323417 | Msa1173140:CDS |
| AGGACTTCATCAAGATCACC+GGG | 0.647810 | 8_1:+3323662 | None:intergenic |
| CTTGAAATTTGTAACCGATG+AGG | 0.660754 | 8_1:-3322276 | Msa1173140:CDS |
| AAGTGATCATGACTATGACA+AGG | 0.663430 | 8_1:-3323237 | Msa1173140:CDS |
| AAGCTTCTCAAAATCGGACA+CGG | 0.665668 | 8_1:-3324826 | Msa1173140:CDS |
| GGGAAAGGGAATGATCGACC+CGG | 0.668601 | 8_1:-3323680 | Msa1173140:CDS |
| AACTATAGTGAAGTATCAGG+TGG | 0.675873 | 8_1:-3323460 | Msa1173140:intron |
| ACACCAATTCAATATTAACA+TGG | 0.676472 | 8_1:+3322973 | None:intergenic |
| ATGCTTCCAGACACAACAGA+AGG | 0.678081 | 8_1:+3323812 | None:intergenic |
| GTGATCATGACTATGACAAG+GGG | 0.688661 | 8_1:-3323235 | Msa1173140:CDS |
| CGTCACCATGAAGAAAGGAG+AGG | 0.691765 | 8_1:-3323852 | Msa1173140:CDS |
| CATTCCACAAGACTCCAACT+CGG | 0.693089 | 8_1:-3323792 | Msa1173140:CDS |
| ATTCATAGGAGAAAGCACCA+TGG | 0.695132 | 8_1:-3321383 | Msa1173140:intron |
| AACATGATCGTTGAAGTTGG+GGG | 0.695655 | 8_1:+3324795 | None:intergenic |
| GTTGTTGCAGAAACTCCGGA+AGG | 0.715531 | 8_1:-3323420 | Msa1173140:CDS |
| GGTGTATGTAGATGCCTTTG+GGG | 0.736707 | 8_1:-3323051 | Msa1173140:intron |
| ACTCGTTTCTTGGATCACGG+TGG | 0.738230 | 8_1:-3323750 | Msa1173140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTACTAAAAGATTAT+TGG | - | chr8_1:3321541-3321560 | Msa1173140:intron | 10.0% |
| !!! | ATTGATATTCTTTAATTTAA+AGG | - | chr8_1:3322655-3322674 | Msa1173140:intron | 10.0% |
| !! | AATAATAAATGTAATATGAT+TGG | + | chr8_1:3323944-3323963 | None:intergenic | 10.0% |
| !!! | TATTTAGTATAGATTTTATG+TGG | - | chr8_1:3319765-3319784 | Msa1173140:intron | 15.0% |
| !!! | ATTTAGTATAGATTTTATGT+GGG | - | chr8_1:3319766-3319785 | Msa1173140:intron | 15.0% |
| !! | TAAATTCATAATGTTAATGT+GGG | - | chr8_1:3320364-3320383 | Msa1173140:intron | 15.0% |
| !! | TAAAATAAAGATATGATACT+GGG | + | chr8_1:3321126-3321145 | None:intergenic | 15.0% |
| !! | ATAAAATAAAGATATGATAC+TGG | + | chr8_1:3321127-3321146 | None:intergenic | 15.0% |
| !!! | ATATCTTTATTTTATGTTTC+TGG | - | chr8_1:3321132-3321151 | Msa1173140:CDS | 15.0% |
| !! | ATTAAGAAGATTATTAAAGA+AGG | - | chr8_1:3321369-3321388 | Msa1173140:CDS | 15.0% |
| !! | TTAAGAAGATTATTAAAGAA+GGG | - | chr8_1:3321370-3321389 | Msa1173140:CDS | 15.0% |
| !! | TTGATATTTCATAAATTTGA+GGG | + | chr8_1:3322455-3322474 | None:intergenic | 15.0% |
| !! | ATTGATATTTCATAAATTTG+AGG | + | chr8_1:3322456-3322475 | None:intergenic | 15.0% |
| !! | ACTTAAAAAAATTGTAATTG+AGG | + | chr8_1:3322533-3322552 | None:intergenic | 15.0% |
| !! | TTTATTTGATTCAAATTCAT+AGG | - | chr8_1:3322881-3322900 | Msa1173140:CDS | 15.0% |
| !! | AAATAGTAATGAAAAAATTG+AGG | - | chr8_1:3322923-3322942 | Msa1173140:CDS | 15.0% |
| !! | GGAAATTTATTATTTAAAAG+TGG | - | chr8_1:3322969-3322988 | Msa1173140:CDS | 15.0% |
| !! | TATATACAATATGTAATAGA+TGG | - | chr8_1:3324873-3324892 | Msa1173140:CDS | 15.0% |
| !!! | TACTATAATTTGAAATCCAA+AGG | + | chr8_1:3319795-3319814 | None:intergenic | 20.0% |
| !!! | TTATAGTATTGAAGTTGTAT+CGG | - | chr8_1:3319807-3319826 | Msa1173140:intron | 20.0% |
| !! | GTGACTATAAATAACAATAT+CGG | - | chr8_1:3319906-3319925 | Msa1173140:intron | 20.0% |
| !! | TGACTATAAATAACAATATC+GGG | - | chr8_1:3319907-3319926 | Msa1173140:intron | 20.0% |
| !!! | TGTAATTTTTGCCAAAATTA+CGG | - | chr8_1:3320266-3320285 | Msa1173140:CDS | 20.0% |
| !! | GTAAATTCATAATGTTAATG+TGG | - | chr8_1:3320363-3320382 | Msa1173140:intron | 20.0% |
| !! | TGGAATTATCAAGAAAATTA+TGG | - | chr8_1:3320570-3320589 | Msa1173140:intron | 20.0% |
| !!! | AGACTAATTATTTGAGATAT+TGG | + | chr8_1:3321191-3321210 | None:intergenic | 20.0% |
| !! | TAAGAAGATTATTAAAGAAG+GGG | - | chr8_1:3321371-3321390 | Msa1173140:CDS | 20.0% |
| !! | TATGCTAAAATGAACATTAA+GGG | + | chr8_1:3321624-3321643 | None:intergenic | 20.0% |
| !! | ATAGTTATTATAGAAGTCAA+CGG | - | chr8_1:3321728-3321747 | Msa1173140:intron | 20.0% |
| !! | TCATAAACAGTTGATTATAT+GGG | + | chr8_1:3322080-3322099 | None:intergenic | 20.0% |
| !!! | TTTTTTTATATAGACTGTGA+TGG | - | chr8_1:3322375-3322394 | Msa1173140:intron | 20.0% |
| !! | AAATTGAACATTCGATTTAA+GGG | + | chr8_1:3322484-3322503 | None:intergenic | 20.0% |
| !! | TAAATTGAACATTCGATTTA+AGG | + | chr8_1:3322485-3322504 | None:intergenic | 20.0% |
| !!! | ATTTTTTTAATTCACGACTT+TGG | - | chr8_1:3323073-3323092 | Msa1173140:intron | 20.0% |
| !!! | ATTTATAATTACCTGTTTTG+TGG | + | chr8_1:3324133-3324152 | None:intergenic | 20.0% |
| !! | ACAAAACAGGTAATTATAAA+TGG | - | chr8_1:3324132-3324151 | Msa1173140:intron | 20.0% |
| !! | ATTAATATTACCTTTGTCTT+AGG | + | chr8_1:3324323-3324342 | None:intergenic | 20.0% |
| !! | ACACAACAAACATTTATTTA+TGG | - | chr8_1:3324933-3324952 | Msa1173140:CDS | 20.0% |
| !!! | TCAACAAAGAAAGCATTAAA+GGG | + | chr8_1:3319580-3319599 | None:intergenic | 25.0% |
| !!! | TTCAACAAAGAAAGCATTAA+AGG | + | chr8_1:3319581-3319600 | None:intergenic | 25.0% |
| ! | ATTTAACATGACATTAGAGT+CGG | - | chr8_1:3320034-3320053 | Msa1173140:CDS | 25.0% |
| ! | TTTGAGCTTCAACAAAATTA+CGG | + | chr8_1:3320244-3320263 | None:intergenic | 25.0% |
| ! | TATCAAGAAAATTATGGAGA+AGG | - | chr8_1:3320576-3320595 | Msa1173140:intron | 25.0% |
| ! | ATCAAGAAAATTATGGAGAA+GGG | - | chr8_1:3320577-3320596 | Msa1173140:intron | 25.0% |
| ! | AACAGAAAACATCGTTAAAA+TGG | + | chr8_1:3320719-3320738 | None:intergenic | 25.0% |
| ! | CCTTCAACAAGTAAAATAAT+TGG | + | chr8_1:3320998-3321017 | None:intergenic | 25.0% |
| !!! | CCAATTATTTTACTTGTTGA+AGG | - | chr8_1:3320995-3321014 | Msa1173140:intron | 25.0% |
| !! | GATTCATGAAGTCTTTTATT+TGG | + | chr8_1:3321161-3321180 | None:intergenic | 25.0% |
| ! | ACACCAATTCAATATTAACA+TGG | + | chr8_1:3321308-3321327 | None:intergenic | 25.0% |
| ! | AATAATCTTCTTAATCACCA+TGG | + | chr8_1:3321364-3321383 | None:intergenic | 25.0% |
| ! | AATGACTCACATTTCATTAT+TGG | - | chr8_1:3321440-3321459 | Msa1173140:intron | 25.0% |
| ! | GTATGCTAAAATGAACATTA+AGG | + | chr8_1:3321625-3321644 | None:intergenic | 25.0% |
| ! | CATAAACAGTTGATTATATG+GGG | + | chr8_1:3322079-3322098 | None:intergenic | 25.0% |
| ! | GTCATAAACAGTTGATTATA+TGG | + | chr8_1:3322081-3322100 | None:intergenic | 25.0% |
| !! | AACATTTCCAAAAGCATAAT+CGG | + | chr8_1:3322224-3322243 | None:intergenic | 25.0% |
| !!! | TGAAATGGTGGATTTTATTA+AGG | - | chr8_1:3322300-3322319 | Msa1173140:CDS | 25.0% |
| !! | GTGGATTTTATTAAGGTAAA+AGG | - | chr8_1:3322307-3322326 | Msa1173140:CDS | 25.0% |
| !! | AGGTCTTTCATTAATTTTCA+TGG | - | chr8_1:3322592-3322611 | Msa1173140:intron | 25.0% |
| !!! | TTTGCTACTTTGTAAATTTG+AGG | - | chr8_1:3322683-3322702 | Msa1173140:intron | 25.0% |
| !!! | TTGCTACTTTGTAAATTTGA+GGG | - | chr8_1:3322684-3322703 | Msa1173140:intron | 25.0% |
| ! | ACTTATATCATTTACTAGCA+TGG | - | chr8_1:3322760-3322779 | Msa1173140:intron | 25.0% |
| ! | TAGTAATGAAAAAATTGAGG+TGG | - | chr8_1:3322926-3322945 | Msa1173140:CDS | 25.0% |
| ! | TCAAAGTTGTTGCAAATAAA+GGG | + | chr8_1:3323034-3323053 | None:intergenic | 25.0% |
| ! | TGTATGGGTTTATAACATAA+TGG | - | chr8_1:3323431-3323450 | Msa1173140:CDS | 25.0% |
| ! | ACTATTATTTCAAGCATGTT+TGG | + | chr8_1:3323466-3323485 | None:intergenic | 25.0% |
| ! | AAACATGCTTGAAATAATAG+TGG | - | chr8_1:3323465-3323484 | Msa1173140:intron | 25.0% |
| ! | TTTAAAGATAGGTTCATGTT+GGG | + | chr8_1:3323601-3323620 | None:intergenic | 25.0% |
| !!! | TGAAATGATGGATTTTTTCA+GGG | + | chr8_1:3323685-3323704 | None:intergenic | 25.0% |
| !!! | TTGAAATGATGGATTTTTTC+AGG | + | chr8_1:3323686-3323705 | None:intergenic | 25.0% |
| ! | TATAATATTGCAGGACAAAA+AGG | + | chr8_1:3323833-3323852 | None:intergenic | 25.0% |
| ! | TCAAAAGAATAAGTGTGATA+TGG | + | chr8_1:3323989-3324008 | None:intergenic | 25.0% |
| ! | AATCCAACAATTAATTTCTC+AGG | + | chr8_1:3324171-3324190 | None:intergenic | 25.0% |
| !! | TTGTGTTACTCTTAGAATTT+AGG | - | chr8_1:3324378-3324397 | Msa1173140:intron | 25.0% |
| !! | TTACTCTTAGAATTTAGGTT+GGG | - | chr8_1:3324383-3324402 | Msa1173140:intron | 25.0% |
| ! | AACAAAAAACATGTGACATA+AGG | + | chr8_1:3324619-3324638 | None:intergenic | 25.0% |
| !!! | TGTTGATTGTAAGTTTTCAT+TGG | - | chr8_1:3324648-3324667 | Msa1173140:CDS | 25.0% |
| !!! | TAGAAGCATTTAAAGTATAC+AGG | + | chr8_1:3324843-3324862 | None:intergenic | 25.0% |
| ! | CTTTAAATGCTTCTAACAAA+AGG | - | chr8_1:3324848-3324867 | Msa1173140:CDS | 25.0% |
| AAGAAGAAGCTTCTCAAAAT+CGG | - | chr8_1:3319446-3319465 | Msa1173140:exon | 30.0% | |
| GCATAAAGATGAAGATGATT+AGG | + | chr8_1:3319520-3319539 | None:intergenic | 30.0% | |
| AATGTCATGTTAAATGAGCT+TGG | + | chr8_1:3320029-3320048 | None:intergenic | 30.0% | |
| TTTAACATGACATTAGAGTC+GGG | - | chr8_1:3320035-3320054 | Msa1173140:CDS | 30.0% | |
| TCATGTACGAATTGTCAAAT+GGG | + | chr8_1:3320102-3320121 | None:intergenic | 30.0% | |
| TTCATGTACGAATTGTCAAA+TGG | + | chr8_1:3320103-3320122 | None:intergenic | 30.0% | |
| TTTGACAATTCGTACATGAA+AGG | - | chr8_1:3320103-3320122 | Msa1173140:intron | 30.0% | |
| AAGGCAGATCATATATACAT+TGG | - | chr8_1:3320122-3320141 | Msa1173140:intron | 30.0% | |
| TCAAGAAAATTATGGAGAAG+GGG | - | chr8_1:3320578-3320597 | Msa1173140:intron | 30.0% | |
| !!! | TGCTGTATTTCTCTTTTTTC+TGG | - | chr8_1:3320738-3320757 | Msa1173140:intron | 30.0% |
| !!! | TGTCAGCTTATTAGTCTTTT+TGG | - | chr8_1:3320785-3320804 | Msa1173140:intron | 30.0% |
| GTTGAATTCTATGTGAATGA+TGG | - | chr8_1:3320885-3320904 | Msa1173140:intron | 30.0% | |
| TATGTGAATGATGGTAATAC+CGG | - | chr8_1:3320894-3320913 | Msa1173140:intron | 30.0% | |
| !! | TCCTATTTTATTTCACCGAA+CGG | - | chr8_1:3320936-3320955 | Msa1173140:intron | 30.0% |
| AATAATTGGTCACAAAGACT+GGG | + | chr8_1:3320984-3321003 | None:intergenic | 30.0% | |
| AAATAATTGGTCACAAAGAC+TGG | + | chr8_1:3320985-3321004 | None:intergenic | 30.0% | |
| AAAAGACTTCATGAATCCTA+CGG | - | chr8_1:3321164-3321183 | Msa1173140:intron | 30.0% | |
| ! | AGTCTTGAATTGTTTTCATG+TGG | - | chr8_1:3321206-3321225 | Msa1173140:intron | 30.0% |
| GCTCCATGTTAATATTGAAT+TGG | - | chr8_1:3321302-3321321 | Msa1173140:CDS | 30.0% | |
| AAGATTATTAAAGAAGGGGA+GGG | - | chr8_1:3321375-3321394 | Msa1173140:CDS | 30.0% | |
| ! | TCAGTTGATTCAAATCAGAA+TGG | - | chr8_1:3321464-3321483 | Msa1173140:intron | 30.0% |
| ! | AGAATGGATTCAGAACTATA+AGG | - | chr8_1:3321480-3321499 | Msa1173140:intron | 30.0% |
| !! | TTCATTTTAGCATACCTAGT+GGG | - | chr8_1:3321630-3321649 | Msa1173140:intron | 30.0% |
| !!! | CTAGTACTTTTTCCTACAAT+AGG | + | chr8_1:3321820-3321839 | None:intergenic | 30.0% |
| !! | AGGAAAAAGTACTAGAAGTA+TGG | - | chr8_1:3321825-3321844 | Msa1173140:intron | 30.0% |
| ATTGCACAAGAAAGTAAAAG+AGG | - | chr8_1:3321856-3321875 | Msa1173140:intron | 30.0% | |
| TTGCACAAGAAAGTAAAAGA+GGG | - | chr8_1:3321857-3321876 | Msa1173140:intron | 30.0% | |
| ! | TCATCGGTTACAAATTTCAA+GGG | + | chr8_1:3322003-3322022 | None:intergenic | 30.0% |
| TTGAAATTTGTAACCGATGA+GGG | - | chr8_1:3322003-3322022 | Msa1173140:CDS | 30.0% | |
| ATCAACTGTTTATGACTTCT+AGG | - | chr8_1:3322085-3322104 | Msa1173140:CDS | 30.0% | |
| ! | ACATTTCCAAAAGCATAATC+GGG | + | chr8_1:3322223-3322242 | None:intergenic | 30.0% |
| AGTAGTGTATGACATTGAAA+TGG | - | chr8_1:3322285-3322304 | Msa1173140:CDS | 30.0% | |
| ATTTCATAAATTTGAGGGAC+TGG | + | chr8_1:3322450-3322469 | None:intergenic | 30.0% | |
| GACTATTTAAGTCAATATGC+AGG | - | chr8_1:3322572-3322591 | Msa1173140:intron | 30.0% | |
| TCATTACTATTTAACTCCCA+TGG | + | chr8_1:3322915-3322934 | None:intergenic | 30.0% | |
| GTCAAAGTTGTTGCAAATAA+AGG | + | chr8_1:3323035-3323054 | None:intergenic | 30.0% | |
| ATTATTTCAAGCATGTTTGG+AGG | + | chr8_1:3323463-3323482 | None:intergenic | 30.0% | |
| ! | CTTTAAAGATAGGTTCATGT+TGG | + | chr8_1:3323602-3323621 | None:intergenic | 30.0% |
| CAACATGAACCTATCTTTAA+AGG | - | chr8_1:3323600-3323619 | Msa1173140:intron | 30.0% | |
| ! | AACTCAACTCCTTTAAAGAT+AGG | + | chr8_1:3323612-3323631 | None:intergenic | 30.0% |
| TCAATGCAAACTTGAAATGA+TGG | + | chr8_1:3323697-3323716 | None:intergenic | 30.0% | |
| ! | TCATCATTCAGCTTTTAACA+TGG | - | chr8_1:3323895-3323914 | Msa1173140:intron | 30.0% |
| ! | TCACACTTATTCTTTTGATC+AGG | - | chr8_1:3323991-3324010 | Msa1173140:intron | 30.0% |
| TCTCCTGAGAAATTAATTGT+TGG | - | chr8_1:3324165-3324184 | Msa1173140:intron | 30.0% | |
| AGCTTATCATTATGAGAACA+TGG | - | chr8_1:3324194-3324213 | Msa1173140:intron | 30.0% | |
| ! | AACATGGTTTTTCATTTTCC+AGG | - | chr8_1:3324210-3324229 | Msa1173140:intron | 30.0% |
| ! | ACATGGTTTTTCATTTTCCA+GGG | - | chr8_1:3324211-3324230 | Msa1173140:intron | 30.0% |
| GTTACTCTTAGAATTTAGGT+TGG | - | chr8_1:3324382-3324401 | Msa1173140:intron | 30.0% | |
| ATGTGGTGTTTATAAAGCTT+GGG | + | chr8_1:3324451-3324470 | None:intergenic | 30.0% | |
| ! | AAGCTTTATAAACACCACAT+GGG | - | chr8_1:3324451-3324470 | Msa1173140:intron | 30.0% |
| TTCATTGTGTTGGATGTTAA+GGG | + | chr8_1:3324507-3324526 | None:intergenic | 30.0% | |
| TTAAAGTATACAGGTTCAAC+AGG | + | chr8_1:3324834-3324853 | None:intergenic | 30.0% | |
| TATGACAAACTCCTAATCTT+TGG | - | chr8_1:3324959-3324978 | Msa1173140:exon | 30.0% | |
| ! | AGATAGAGTTTTCGCAAAGA+TGG | - | chr8_1:3319307-3319326 | Msa1173140:three_prime_UTR | 35.0% |
| GGAGATAAAAGAAGATGAAC+TGG | - | chr8_1:3319340-3319359 | Msa1173140:three_prime_UTR | 35.0% | |
| TTGAGAAGCTTCTTCTTGAT+CGG | + | chr8_1:3319443-3319462 | None:intergenic | 35.0% | |
| TAACATGATCGTTGAAGTTG+GGG | + | chr8_1:3319487-3319506 | None:intergenic | 35.0% | |
| GTAACATGATCGTTGAAGTT+GGG | + | chr8_1:3319488-3319507 | None:intergenic | 35.0% | |
| AGTAACATGATCGTTGAAGT+TGG | + | chr8_1:3319489-3319508 | None:intergenic | 35.0% | |
| ATGCATGCAGTTCATTATGT+TGG | - | chr8_1:3319601-3319620 | Msa1173140:intron | 35.0% | |
| TATGTTGGAACTTTGCTTGA+TGG | - | chr8_1:3319616-3319635 | Msa1173140:intron | 35.0% | |
| TTTGCTTGATGGAACCAAAT+TGG | - | chr8_1:3319627-3319646 | Msa1173140:intron | 35.0% | |
| TTGCTTGATGGAACCAAATT+GGG | - | chr8_1:3319628-3319647 | Msa1173140:intron | 35.0% | |
| ATTCAACAACAAGAGAACCT+TGG | + | chr8_1:3319845-3319864 | None:intergenic | 35.0% | |
| AAATTACCCAATCCTAACAC+AGG | - | chr8_1:3319877-3319896 | Msa1173140:intron | 35.0% | |
| AATTACCCAATCCTAACACA+GGG | - | chr8_1:3319878-3319897 | Msa1173140:intron | 35.0% | |
| AAAACTAGCTCAAAGGATGA+GGG | + | chr8_1:3319994-3320013 | None:intergenic | 35.0% | |
| AAAAACTAGCTCAAAGGATG+AGG | + | chr8_1:3319995-3320014 | None:intergenic | 35.0% | |
| !!! | TCATCCTTTGAGCTAGTTTT+TGG | - | chr8_1:3319994-3320013 | Msa1173140:CDS | 35.0% |
| !!! | CATCCTTTGAGCTAGTTTTT+GGG | - | chr8_1:3319995-3320014 | Msa1173140:CDS | 35.0% |
| !! | AACCGTGATTTGTTCATCAT+CGG | - | chr8_1:3320151-3320170 | Msa1173140:intron | 35.0% |
| AACCGATGATGAACAAATCA+CGG | + | chr8_1:3320156-3320175 | None:intergenic | 35.0% | |
| AATCAAAACACACGCTTAGA+GGG | + | chr8_1:3320191-3320210 | None:intergenic | 35.0% | |
| !!! | GTTTTGATTGATAGTGAGCT+TGG | - | chr8_1:3320202-3320221 | Msa1173140:CDS | 35.0% |
| ATTCACCTTAGTGCAATGTA+TGG | + | chr8_1:3320327-3320346 | None:intergenic | 35.0% | |
| AATGTTAATGTGGGTGTGAT+AGG | - | chr8_1:3320373-3320392 | Msa1173140:intron | 35.0% | |
| AAAATTATGGAGAAGGGGAA+AGG | - | chr8_1:3320583-3320602 | Msa1173140:intron | 35.0% | |
| AAATTATGGAGAAGGGGAAA+GGG | - | chr8_1:3320584-3320603 | Msa1173140:intron | 35.0% | |
| ! | TAATTCTTTTGCTTCCCACA+TGG | - | chr8_1:3320664-3320683 | Msa1173140:intron | 35.0% |
| ! | TGCAACTATAGTGAAGTATC+AGG | - | chr8_1:3320815-3320834 | Msa1173140:intron | 35.0% |
| ! | AACTATAGTGAAGTATCAGG+TGG | - | chr8_1:3320818-3320837 | Msa1173140:intron | 35.0% |
| !! | CCTATTTTATTTCACCGAAC+GGG | - | chr8_1:3320937-3320956 | Msa1173140:intron | 35.0% |
| !! | CTATTTTATTTCACCGAACG+GGG | - | chr8_1:3320938-3320957 | Msa1173140:intron | 35.0% |
| ATGAAATCATATTCCCCGTT+CGG | + | chr8_1:3320954-3320973 | None:intergenic | 35.0% | |
| !! | ATGATCACTTTTGGCAATCT+AGG | + | chr8_1:3321031-3321050 | None:intergenic | 35.0% |
| ! | GTCATAGTCATGATCACTTT+TGG | + | chr8_1:3321040-3321059 | None:intergenic | 35.0% |
| AAGTGATCATGACTATGACA+AGG | - | chr8_1:3321041-3321060 | Msa1173140:CDS | 35.0% | |
| AGTGATCATGACTATGACAA+GGG | - | chr8_1:3321042-3321061 | Msa1173140:CDS | 35.0% | |
| ! | TATTTGAGATATTGGACCGT+AGG | + | chr8_1:3321183-3321202 | None:intergenic | 35.0% |
| AACATTTATGACAGGCTTGA+AGG | + | chr8_1:3321331-3321350 | None:intergenic | 35.0% | |
| AAGCCTGTCATAAATGTTAC+TGG | - | chr8_1:3321333-3321352 | Msa1173140:CDS | 35.0% | |
| TCACCAGTAACATTTATGAC+AGG | + | chr8_1:3321339-3321358 | None:intergenic | 35.0% | |
| GAAGATTATTAAAGAAGGGG+AGG | - | chr8_1:3321374-3321393 | Msa1173140:CDS | 35.0% | |
| AATTACCGTCACGTTATCAA+GGG | + | chr8_1:3321578-3321597 | None:intergenic | 35.0% | |
| AAATTACCGTCACGTTATCA+AGG | + | chr8_1:3321579-3321598 | None:intergenic | 35.0% | |
| !! | GTTCATTTTAGCATACCTAG+TGG | - | chr8_1:3321629-3321648 | Msa1173140:intron | 35.0% |
| CTACGAAAAAGTCCTATTGT+AGG | - | chr8_1:3321805-3321824 | Msa1173140:intron | 35.0% | |
| CAAGAAAGTAAAAGAGGGAA+AGG | - | chr8_1:3321862-3321881 | Msa1173140:intron | 35.0% | |
| CAAAACCAATCAGTAAACAG+TGG | + | chr8_1:3321897-3321916 | None:intergenic | 35.0% | |
| ! | CTCATCGGTTACAAATTTCA+AGG | + | chr8_1:3322004-3322023 | None:intergenic | 35.0% |
| CTTGAAATTTGTAACCGATG+AGG | - | chr8_1:3322002-3322021 | Msa1173140:CDS | 35.0% | |
| AAGAATATACTCACCCTCAT+CGG | + | chr8_1:3322019-3322038 | None:intergenic | 35.0% | |
| ! | AAAAAGCATGCAAAGGATAG+TGG | + | chr8_1:3322054-3322073 | None:intergenic | 35.0% |
| TCTGTAGAACAAGTGATTAC+TGG | - | chr8_1:3322139-3322158 | Msa1173140:intron | 35.0% | |
| AACAATGAAGAAGGGTGAAA+GGG | - | chr8_1:3322180-3322199 | Msa1173140:intron | 35.0% | |
| ! | ATCGGGATGTATACTGATTA+TGG | + | chr8_1:3322206-3322225 | None:intergenic | 35.0% |
| ! | ATACATCCCGATTATGCTTT+TGG | - | chr8_1:3322214-3322233 | Msa1173140:intron | 35.0% |
| AGTGTATGACATTGAAATGG+TGG | - | chr8_1:3322288-3322307 | Msa1173140:CDS | 35.0% | |
| AGGAAATATATCCTCTTCCT+TGG | - | chr8_1:3322327-3322346 | Msa1173140:CDS | 35.0% | |
| ! | TTTTCAATGGCGAAAATGCT+CGG | + | chr8_1:3322409-3322428 | None:intergenic | 35.0% |
| TTTCGCCATTGAAAATTGCA+AGG | - | chr8_1:3322414-3322433 | Msa1173140:intron | 35.0% | |
| TTCGCCATTGAAAATTGCAA+GGG | - | chr8_1:3322415-3322434 | Msa1173140:intron | 35.0% | |
| TGTCGACAATTACAATTTCG+AGG | - | chr8_1:3322715-3322734 | Msa1173140:intron | 35.0% | |
| GATGTGTCTATCTACATTAG+TGG | - | chr8_1:3322841-3322860 | Msa1173140:intron | 35.0% | |
| AATGAAAAAATTGAGGTGGC+TGG | - | chr8_1:3322930-3322949 | Msa1173140:CDS | 35.0% | |
| ATGAAAAAATTGAGGTGGCT+GGG | - | chr8_1:3322931-3322950 | Msa1173140:CDS | 35.0% | |
| TTAGCAGAGATGGATCTTTA+GGG | - | chr8_1:3323136-3323155 | Msa1173140:intron | 35.0% | |
| CAGGAAAGTCATTCAGTTTA+AGG | + | chr8_1:3323227-3323246 | None:intergenic | 35.0% | |
| CTTAAACTGAATGACTTTCC+TGG | - | chr8_1:3323225-3323244 | Msa1173140:CDS | 35.0% | |
| AGCAATCAAACTATGTACTC+AGG | - | chr8_1:3323248-3323267 | Msa1173140:CDS | 35.0% | |
| ATTAACTCGACTTTGATGCT+TGG | + | chr8_1:3323333-3323352 | None:intergenic | 35.0% | |
| !! | CAGATCGGCTTTTCAAATTT+GGG | + | chr8_1:3323510-3323529 | None:intergenic | 35.0% |
| !! | ACAGATCGGCTTTTCAAATT+TGG | + | chr8_1:3323511-3323530 | None:intergenic | 35.0% |
| ATTTGAAAAGCCGATCTGTA+AGG | - | chr8_1:3323512-3323531 | Msa1173140:intron | 35.0% | |
| AGTCCAGTATAAACGAATTC+AGG | - | chr8_1:3323647-3323666 | Msa1173140:intron | 35.0% | |
| GTCCAGTATAAACGAATTCA+GGG | - | chr8_1:3323648-3323667 | Msa1173140:intron | 35.0% | |
| ATCCCTGAATTCGTTTATAC+TGG | + | chr8_1:3323653-3323672 | None:intergenic | 35.0% | |
| ATTGACCTAACAAACTGAAG+AGG | - | chr8_1:3323712-3323731 | Msa1173140:CDS | 35.0% | |
| ! | AATCACCTCTTCAGTTTGTT+AGG | + | chr8_1:3323720-3323739 | None:intergenic | 35.0% |
| TGGCTACACTTATATAACTC+AGG | + | chr8_1:3323924-3323943 | None:intergenic | 35.0% | |
| ! | GCAAAAGCATATATAGAGAC+AGG | - | chr8_1:3324058-3324077 | Msa1173140:intron | 35.0% |
| TATGTTTGCACCTAAGACAA+AGG | - | chr8_1:3324310-3324329 | Msa1173140:intron | 35.0% | |
| CATGTGGTGTTTATAAAGCT+TGG | + | chr8_1:3324452-3324471 | None:intergenic | 35.0% | |
| ! | CAAGCTTTATAAACACCACA+TGG | - | chr8_1:3324450-3324469 | Msa1173140:intron | 35.0% |
| TCATTGTGTTGGATGTTAAG+GGG | + | chr8_1:3324506-3324525 | None:intergenic | 35.0% | |
| CTTCATTGTGTTGGATGTTA+AGG | + | chr8_1:3324508-3324527 | None:intergenic | 35.0% | |
| CTTAACATCCAACACAATGA+AGG | - | chr8_1:3324506-3324525 | Msa1173140:intron | 35.0% | |
| GAAACCCAAATACCACAATT+AGG | - | chr8_1:3324549-3324568 | Msa1173140:intron | 35.0% | |
| ATGTGACATAAGGTAACTGT+TGG | + | chr8_1:3324609-3324628 | None:intergenic | 35.0% | |
| ATTGAAGGTTGAGAAAGAAG+AGG | - | chr8_1:3324733-3324752 | Msa1173140:intron | 35.0% | |
| AAAATGGAAATGGGCAATGT+TGG | - | chr8_1:3324767-3324786 | Msa1173140:intron | 35.0% | |
| AAAATTAAACCGCCATCAGA+AGG | + | chr8_1:3324806-3324825 | None:intergenic | 35.0% | |
| GATGGTAGCTGCATAAATTT+CGG | - | chr8_1:3324891-3324910 | Msa1173140:CDS | 35.0% | |
| TTTCGGATGAAAGTCTTACA+TGG | - | chr8_1:3324908-3324927 | Msa1173140:CDS | 35.0% | |
| ATGTTGTTCGTCCAAAGATT+AGG | + | chr8_1:3324973-3324992 | None:intergenic | 35.0% | |
| AAGCTTCTCAAAATCGGACA+CGG | - | chr8_1:3319452-3319471 | Msa1173140:exon | 40.0% | |
| AACATGATCGTTGAAGTTGG+GGG | + | chr8_1:3319486-3319505 | None:intergenic | 40.0% | |
| AACCAAATTGGGTTCTGCTA+GGG | - | chr8_1:3319639-3319658 | Msa1173140:intron | 40.0% | |
| ! | TCTCCTGTCACATTTTCTCT+TGG | - | chr8_1:3319670-3319689 | Msa1173140:intron | 40.0% |
| TGTCCAAGAGAAAATGTGAC+AGG | + | chr8_1:3319676-3319695 | None:intergenic | 40.0% | |
| ! | GTCACATTTTCTCTTGGACA+AGG | - | chr8_1:3319676-3319695 | Msa1173140:intron | 40.0% |
| ! | GATTTTATGTGGGTGTCCTT+TGG | - | chr8_1:3319776-3319795 | Msa1173140:intron | 40.0% |
| TAACAATATCGGGCTCATTG+AGG | - | chr8_1:3319917-3319936 | Msa1173140:intron | 40.0% | |
| TCACCCAAAAACTAGCTCAA+AGG | + | chr8_1:3320001-3320020 | None:intergenic | 40.0% | |
| ATGACATTAGAGTCGGGTTA+AGG | - | chr8_1:3320041-3320060 | Msa1173140:CDS | 40.0% | |
| ! | ACGAATTGTCAAATGGGCTT+TGG | + | chr8_1:3320096-3320115 | None:intergenic | 40.0% |
| CAATCAAAACACACGCTTAG+AGG | + | chr8_1:3320192-3320211 | None:intergenic | 40.0% | |
| TAGTGCAATGTATGGATTCG+CGG | + | chr8_1:3320319-3320338 | None:intergenic | 40.0% | |
| CGAATCCATACATTGCACTA+AGG | - | chr8_1:3320319-3320338 | Msa1173140:intron | 40.0% | |
| GCACTAAGGTGAATTGTTTG+TGG | - | chr8_1:3320333-3320352 | Msa1173140:intron | 40.0% | |
| AGGTGAATTGTTTGTGGTTC+AGG | - | chr8_1:3320339-3320358 | Msa1173140:intron | 40.0% | |
| GTGATAGGTGAATTGTATGC+TGG | - | chr8_1:3320388-3320407 | Msa1173140:intron | 40.0% | |
| AGGTGAATTGTATGCTGGAT+TGG | - | chr8_1:3320393-3320412 | Msa1173140:intron | 40.0% | |
| ! | TTGTATGCTGGATTGGATGA+TGG | - | chr8_1:3320400-3320419 | Msa1173140:intron | 40.0% |
| ACATTACCTTCTGTTGTGTC+TGG | - | chr8_1:3320460-3320479 | Msa1173140:intron | 40.0% | |
| AAGGACTTCATCAAGATCAC+CGG | + | chr8_1:3320620-3320639 | None:intergenic | 40.0% | |
| !! | ATCTCAACTTGTTGCCATGT+GGG | + | chr8_1:3320681-3320700 | None:intergenic | 40.0% |
| !! | AATCTCAACTTGTTGCCATG+TGG | + | chr8_1:3320682-3320701 | None:intergenic | 40.0% |
| TAGAATTCAACTCCTCCTTC+CGG | + | chr8_1:3320876-3320895 | None:intergenic | 40.0% | |
| GTGCAACTTAACAGTGTAAC+CGG | + | chr8_1:3320916-3320935 | None:intergenic | 40.0% | |
| ! | CCCGTTCGGTGAAATAAAAT+AGG | + | chr8_1:3320940-3320959 | None:intergenic | 40.0% |
| GTGATCATGACTATGACAAG+GGG | - | chr8_1:3321043-3321062 | Msa1173140:CDS | 40.0% | |
| TGGTGTATGTAGATGCCTTT+GGG | - | chr8_1:3321226-3321245 | Msa1173140:intron | 40.0% | |
| TTGAGTCTGGTGGAATTGAA+CGG | + | chr8_1:3321281-3321300 | None:intergenic | 40.0% | |
| !! | TTAACATGGAGCATTGAGTC+TGG | + | chr8_1:3321294-3321313 | None:intergenic | 40.0% |
| AAATGTTACTGGTGACTCCA+TGG | - | chr8_1:3321344-3321363 | Msa1173140:CDS | 40.0% | |
| ! | CAATGAGGGTGCAAATGTTA+CGG | - | chr8_1:3321410-3321429 | Msa1173140:intron | 40.0% |
| ! | AATGAGGGTGCAAATGTTAC+GGG | - | chr8_1:3321411-3321430 | Msa1173140:intron | 40.0% |
| !! | TCAAACCCTTGATAACGTGA+CGG | - | chr8_1:3321570-3321589 | Msa1173140:intron | 40.0% |
| ! | ACAACAAGTCTTTTCCCACT+AGG | + | chr8_1:3321647-3321666 | None:intergenic | 40.0% |
| !!! | TGTTGCTGCTTTTGTCGAAA+AGG | - | chr8_1:3321664-3321683 | Msa1173140:intron | 40.0% |
| GTAAAAGAGGGAAAGGAAGA+AGG | - | chr8_1:3321869-3321888 | Msa1173140:intron | 40.0% | |
| TACACAGCTATGCTAGAAGA+TGG | - | chr8_1:3321940-3321959 | Msa1173140:intron | 40.0% | |
| GGCACTGTATTCGAAAAAAG+AGG | - | chr8_1:3321961-3321980 | Msa1173140:intron | 40.0% | |
| ! | TGGGGTAAAAAAGCATGCAA+AGG | + | chr8_1:3322061-3322080 | None:intergenic | 40.0% |
| CAACAATGAAGAAGGGTGAA+AGG | - | chr8_1:3322179-3322198 | Msa1173140:intron | 40.0% | |
| !! | TCATACACTACTTTTGAGCC+TGG | + | chr8_1:3322277-3322296 | None:intergenic | 40.0% |
| ! | CTTTGAGGAATTGGAGATCT+AGG | - | chr8_1:3322352-3322371 | Msa1173140:intron | 40.0% |
| CCATTGAAAATTGCAAGGGT+GGG | - | chr8_1:3322419-3322438 | Msa1173140:intron | 40.0% | |
| !! | ATTCATAGGAGAAAGCACCA+TGG | - | chr8_1:3322895-3322914 | Msa1173140:CDS | 40.0% |
| !! | TTCATAGGAGAAAGCACCAT+GGG | - | chr8_1:3322896-3322915 | Msa1173140:CDS | 40.0% |
| ! | AGCAGCGAAGAAGTATGATA+AGG | - | chr8_1:3323004-3323023 | Msa1173140:CDS | 40.0% |
| ! | AGCGAAGAAGTATGATAAGG+TGG | - | chr8_1:3323007-3323026 | Msa1173140:CDS | 40.0% |
| TTCCATGATACCCATTTCTC+AGG | - | chr8_1:3323101-3323120 | Msa1173140:intron | 40.0% | |
| AAATCAGCAGCCTGAGAAAT+GGG | + | chr8_1:3323114-3323133 | None:intergenic | 40.0% | |
| AAAATCAGCAGCCTGAGAAA+TGG | + | chr8_1:3323115-3323134 | None:intergenic | 40.0% | |
| !! | GCTGATTTTGTTAGCAGAGA+TGG | - | chr8_1:3323126-3323145 | Msa1173140:intron | 40.0% |
| GTTAGCAGAGATGGATCTTT+AGG | - | chr8_1:3323135-3323154 | Msa1173140:intron | 40.0% | |
| TAGCAGAGATGGATCTTTAG+GGG | - | chr8_1:3323137-3323156 | Msa1173140:intron | 40.0% | |
| AATCGTTGAGAGTTTCATGC+TGG | - | chr8_1:3323181-3323200 | Msa1173140:intron | 40.0% | |
| ! | AGAGTTTCATGCTGGTTGAA+CGG | - | chr8_1:3323189-3323208 | Msa1173140:intron | 40.0% |
| GTACATAGTTTGATTGCTCC+AGG | + | chr8_1:3323246-3323265 | None:intergenic | 40.0% | |
| ! | AAACAGCCAATCGACTCATT+TGG | - | chr8_1:3323272-3323291 | Msa1173140:intron | 40.0% |
| ACTATGCCAAATGAGTCGAT+TGG | + | chr8_1:3323281-3323300 | None:intergenic | 40.0% | |
| AAACCCATACAATCGTCTTC+AGG | + | chr8_1:3323422-3323441 | None:intergenic | 40.0% | |
| CGCTACTAAACCTTACAGAT+CGG | + | chr8_1:3323525-3323544 | None:intergenic | 40.0% | |
| ! | GTTTATACTGGACTCTGAGA+TGG | + | chr8_1:3323641-3323660 | None:intergenic | 40.0% |
| CCAGTGGCTTATAATATTGC+AGG | + | chr8_1:3323842-3323861 | None:intergenic | 40.0% | |
| CCTGCAATATTATAAGCCAC+TGG | - | chr8_1:3323839-3323858 | Msa1173140:CDS | 40.0% | |
| ! | CATTTACTCTTTTGCACCAG+TGG | + | chr8_1:3323858-3323877 | None:intergenic | 40.0% |
| CACTGGTGCAAAAGAGTAAA+TGG | - | chr8_1:3323856-3323875 | Msa1173140:CDS | 40.0% | |
| AGACATCAAGAAAGCTCTTG+AGG | - | chr8_1:3324102-3324121 | Msa1173140:intron | 40.0% | |
| ! | TGGTTTTTCATTTTCCAGGG+AGG | - | chr8_1:3324214-3324233 | Msa1173140:intron | 40.0% |
| ! | TTCATTTTCCAGGGAGGTAA+AGG | - | chr8_1:3324220-3324239 | Msa1173140:intron | 40.0% |
| CGAACTCAACCTTACAAAAC+CGG | - | chr8_1:3324407-3324426 | Msa1173140:intron | 40.0% | |
| ATTGCTTGATATGACCCATG+TGG | + | chr8_1:3324468-3324487 | None:intergenic | 40.0% | |
| ATGGGTCATATCAAGCAATG+AGG | - | chr8_1:3324469-3324488 | Msa1173140:intron | 40.0% | |
| TGGGTCATATCAAGCAATGA+GGG | - | chr8_1:3324470-3324489 | Msa1173140:intron | 40.0% | |
| ! | ATCCAACACAATGAAGGTGT+TGG | - | chr8_1:3324512-3324531 | Msa1173140:intron | 40.0% |
| ACCCAAATACCACAATTAGG+CGG | - | chr8_1:3324552-3324571 | Msa1173140:intron | 40.0% | |
| TGTTCTCAAGCAGAGATTGA+AGG | - | chr8_1:3324718-3324737 | Msa1173140:intron | 40.0% | |
| AAGGTTGAGAAAGAAGAGGA+TGG | - | chr8_1:3324737-3324756 | Msa1173140:intron | 40.0% | |
| AGGTTGAGAAAGAAGAGGAT+GGG | - | chr8_1:3324738-3324757 | Msa1173140:intron | 40.0% | |
| CGCAAAGATGGCAGTGTTAT+CGG | - | chr8_1:3319319-3319338 | Msa1173140:three_prime_UTR | 45.0% | |
| GATGAACTGGATGAAGAACC+AGG | - | chr8_1:3319353-3319372 | Msa1173140:three_prime_UTR | 45.0% | |
| TTCTCAAAATCGGACACGGT+TGG | - | chr8_1:3319456-3319475 | Msa1173140:exon | 45.0% | |
| TCTCAAAATCGGACACGGTT+GGG | - | chr8_1:3319457-3319476 | Msa1173140:exon | 45.0% | |
| GAACCAAATTGGGTTCTGCT+AGG | - | chr8_1:3319638-3319657 | Msa1173140:intron | 45.0% | |
| ATCCCTAGCAGAACCCAATT+TGG | + | chr8_1:3319644-3319663 | None:intergenic | 45.0% | |
| CAAGAGAACCTTGGCAATGT+GGG | + | chr8_1:3319836-3319855 | None:intergenic | 45.0% | |
| ACAAGAGAACCTTGGCAATG+TGG | + | chr8_1:3319837-3319856 | None:intergenic | 45.0% | |
| TACCTCCCTGTGTTAGGATT+GGG | + | chr8_1:3319886-3319905 | None:intergenic | 45.0% | |
| CATTAGAGTCGGGTTAAGGA+TGG | - | chr8_1:3320045-3320064 | Msa1173140:CDS | 45.0% | |
| ! | GCTTTGGATCTCACTCTCAA+AGG | + | chr8_1:3320080-3320099 | None:intergenic | 45.0% |
| ! | ACGGTGTGTCTCCGTAATTT+TGG | + | chr8_1:3320280-3320299 | None:intergenic | 45.0% |
| GGAATCGTCACCATGAAGAA+AGG | - | chr8_1:3320421-3320440 | Msa1173140:intron | 45.0% | |
| ATGCTTCCAGACACAACAGA+AGG | + | chr8_1:3320469-3320488 | None:intergenic | 45.0% | |
| CATTCCACAAGACTCCAACT+CGG | - | chr8_1:3320486-3320505 | Msa1173140:intron | 45.0% | |
| CTCAAATTGCACAACCGAGT+TGG | + | chr8_1:3320503-3320522 | None:intergenic | 45.0% | |
| CAACTCGGTTGTGCAATTTG+AGG | - | chr8_1:3320501-3320520 | Msa1173140:intron | 45.0% | |
| TTGAGGTGGAACTCGTTTCT+TGG | - | chr8_1:3320518-3320537 | Msa1173140:intron | 45.0% | |
| GGAACTCGTTTCTTGGATCA+CGG | - | chr8_1:3320525-3320544 | Msa1173140:intron | 45.0% | |
| !! | GTGGTGGATGTTTGCAAAGA+TGG | - | chr8_1:3320547-3320566 | Msa1173140:intron | 45.0% |
| GTGGATGTTTGCAAAGATGG+TGG | - | chr8_1:3320550-3320569 | Msa1173140:intron | 45.0% | |
| AGGACTTCATCAAGATCACC+GGG | + | chr8_1:3320619-3320638 | None:intergenic | 45.0% | |
| GGTGATCTTGATGAAGTCCT+TGG | - | chr8_1:3320619-3320638 | Msa1173140:intron | 45.0% | |
| AAGCAGCTGATAGACTACCA+AGG | + | chr8_1:3320639-3320658 | None:intergenic | 45.0% | |
| TATCAGGTGGCACTTGAAGA+TGG | - | chr8_1:3320831-3320850 | Msa1173140:intron | 45.0% | |
| CACTGTTGTTGCAGAAACTC+CGG | - | chr8_1:3320854-3320873 | Msa1173140:intron | 45.0% | |
| GGGTTAAGTAGAAGAACGAG+AGG | + | chr8_1:3321106-3321125 | None:intergenic | 45.0% | |
| GTGGTGTATGTAGATGCCTT+TGG | - | chr8_1:3321225-3321244 | Msa1173140:intron | 45.0% | |
| GGTGTATGTAGATGCCTTTG+GGG | - | chr8_1:3321227-3321246 | Msa1173140:intron | 45.0% | |
| CGTAACATTTGCACCCTCAT+TGG | + | chr8_1:3321412-3321431 | None:intergenic | 45.0% | |
| AGGAGCCACTGTTTACTGAT+TGG | - | chr8_1:3321889-3321908 | Msa1173140:intron | 45.0% | |
| AGCATAGCTGTGTATCTGAC+TGG | + | chr8_1:3321934-3321953 | None:intergenic | 45.0% | |
| TCTTCATTGTTGCCACTGCT+CGG | + | chr8_1:3322171-3322190 | None:intergenic | 45.0% | |
| AGCAGTGGCAACAATGAAGA+AGG | - | chr8_1:3322171-3322190 | Msa1173140:intron | 45.0% | |
| GCAGTGGCAACAATGAAGAA+GGG | - | chr8_1:3322172-3322191 | Msa1173140:intron | 45.0% | |
| !! | TACACTACTTTTGAGCCTGG+TGG | + | chr8_1:3322274-3322293 | None:intergenic | 45.0% |
| !! | TCCTTGGTGCTTTGAGGAAT+TGG | - | chr8_1:3322343-3322362 | Msa1173140:CDS | 45.0% |
| ! | TCCAATTCCTCAAAGCACCA+AGG | + | chr8_1:3322347-3322366 | None:intergenic | 45.0% |
| GCCATTGAAAATTGCAAGGG+TGG | - | chr8_1:3322418-3322437 | Msa1173140:intron | 45.0% | |
| ! | CCCACCCTTGCAATTTTCAA+TGG | + | chr8_1:3322422-3322441 | None:intergenic | 45.0% |
| AAAAAATTGAGGTGGCTGGG+AGG | - | chr8_1:3322934-3322953 | Msa1173140:CDS | 45.0% | |
| AGCCTGAGAAATGGGTATCA+TGG | + | chr8_1:3323106-3323125 | None:intergenic | 45.0% | |
| ! | TGGATCTTTAGGGGATGATG+AGG | - | chr8_1:3323146-3323165 | Msa1173140:intron | 45.0% |
| GAGCCTGAAGACGATTGTAT+GGG | - | chr8_1:3323416-3323435 | Msa1173140:CDS | 45.0% | |
| TGGGATCTTAGATGCATCAG+TGG | + | chr8_1:3323582-3323601 | None:intergenic | 45.0% | |
| GTGATTGAACCGAAGTCTTC+TGG | - | chr8_1:3323734-3323753 | Msa1173140:CDS | 45.0% | |
| CATACCAGACCAGAAGACTT+CGG | + | chr8_1:3323746-3323765 | None:intergenic | 45.0% | |
| CATCAAGAAAGCTCTTGAGG+TGG | - | chr8_1:3324105-3324124 | Msa1173140:intron | 45.0% | |
| TTGAGGTGGATCCACAAAAC+AGG | - | chr8_1:3324119-3324138 | Msa1173140:intron | 45.0% | |
| CTTTAGTACCTTTACCTCCC+TGG | + | chr8_1:3324231-3324250 | None:intergenic | 45.0% | |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr8_1:3324419-3324438 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr8_1:3324416-3324435 | Msa1173140:intron | 45.0% |
| !! | AAAACCGGCTTGTAAGGTGA+GGG | - | chr8_1:3324422-3324441 | Msa1173140:intron | 45.0% |
| TTGTGTTGGATGTTAAGGGG+TGG | + | chr8_1:3324503-3324522 | None:intergenic | 45.0% | |
| CTCCAACACCTTCATTGTGT+TGG | + | chr8_1:3324517-3324536 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | - | chr8_1:3324515-3324534 | Msa1173140:intron | 45.0% |
| GCCGCCTAATTGTGGTATTT+GGG | + | chr8_1:3324556-3324575 | None:intergenic | 45.0% | |
| AGCCGCCTAATTGTGGTATT+TGG | + | chr8_1:3324557-3324576 | None:intergenic | 45.0% | |
| AATACCACAATTAGGCGGCT+AGG | - | chr8_1:3324557-3324576 | Msa1173140:intron | 45.0% | |
| ATACCACAATTAGGCGGCTA+GGG | - | chr8_1:3324558-3324577 | Msa1173140:intron | 45.0% | |
| GGTTGAGAAAGAAGAGGATG+GGG | - | chr8_1:3324739-3324758 | Msa1173140:intron | 45.0% | |
| TGGGGTGGTGAAAATGGAAA+TGG | - | chr8_1:3324757-3324776 | Msa1173140:intron | 45.0% | |
| GGGGTGGTGAAAATGGAAAT+GGG | - | chr8_1:3324758-3324777 | Msa1173140:intron | 45.0% | |
| !!! | ATTACATTTATTATTATTTT+AGG | - | chr8_1:3323949-3323968 | Msa1173140:intron | 5.0% |
| TCAGCACCACCTCAAAAGCT+CGG | - | chr8_1:3319389-3319408 | Msa1173140:three_prime_UTR | 50.0% | |
| ! | CTTTCTTCGCCGAGCTTTTG+AGG | + | chr8_1:3319401-3319420 | None:intergenic | 50.0% |
| CTCAAAAGCTCGGCGAAGAA+AGG | - | chr8_1:3319399-3319418 | Msa1173140:three_prime_UTR | 50.0% | |
| CTTCTTCTTGATCGGCGAGT+TGG | + | chr8_1:3319435-3319454 | None:intergenic | 50.0% | |
| TACCCAATCCTAACACAGGG+AGG | - | chr8_1:3319881-3319900 | Msa1173140:intron | 50.0% | |
| CTACCTCCCTGTGTTAGGAT+TGG | + | chr8_1:3319887-3319906 | None:intergenic | 50.0% | |
| AGTCACTACCTCCCTGTGTT+AGG | + | chr8_1:3319892-3319911 | None:intergenic | 50.0% | |
| TCGGGCTCATTGAGGCTAAT+TGG | - | chr8_1:3319925-3319944 | Msa1173140:intron | 50.0% | |
| TCCCTTAACGAGTGTGTGCT+TGG | - | chr8_1:3319965-3319984 | Msa1173140:intron | 50.0% | |
| CCCAAGCACACACTCGTTAA+GGG | + | chr8_1:3319969-3319988 | None:intergenic | 50.0% | |
| CCCTTAACGAGTGTGTGCTT+GGG | - | chr8_1:3319966-3319985 | Msa1173140:intron | 50.0% | |
| CGTCACCATGAAGAAAGGAG+AGG | - | chr8_1:3320426-3320445 | Msa1173140:intron | 50.0% | |
| CACCATGAAGAAAGGAGAGG+TGG | - | chr8_1:3320429-3320448 | Msa1173140:intron | 50.0% | |
| TGCCACCTCTCCTTTCTTCA+TGG | + | chr8_1:3320434-3320453 | None:intergenic | 50.0% | |
| ! | ACAACCGAGTTGGAGTCTTG+TGG | + | chr8_1:3320493-3320512 | None:intergenic | 50.0% |
| CTCGGTTGTGCAATTTGAGG+TGG | - | chr8_1:3320504-3320523 | Msa1173140:intron | 50.0% | |
| ACTCGTTTCTTGGATCACGG+TGG | - | chr8_1:3320528-3320547 | Msa1173140:intron | 50.0% | |
| GTTGTTGCAGAAACTCCGGA+AGG | - | chr8_1:3320858-3320877 | Msa1173140:intron | 50.0% | |
| ! | TGTAGATGCCTTTGGGGAGA+AGG | - | chr8_1:3321233-3321252 | Msa1173140:intron | 50.0% |
| ! | GTAGATGCCTTTGGGGAGAA+GGG | - | chr8_1:3321234-3321253 | Msa1173140:intron | 50.0% |
| ! | TAGATGCCTTTGGGGAGAAG+GGG | - | chr8_1:3321235-3321254 | Msa1173140:intron | 50.0% |
| !! | ACATGGAGCATTGAGTCTGG+TGG | + | chr8_1:3321291-3321310 | None:intergenic | 50.0% |
| GGTGCTTTCACAGCCAATGA+GGG | - | chr8_1:3321396-3321415 | Msa1173140:intron | 50.0% | |
| AGCTGTGTATCTGACTGGCA+TGG | + | chr8_1:3321929-3321948 | None:intergenic | 50.0% | |
| !! | TACTGGTTTAGACCGAGCAG+TGG | - | chr8_1:3322156-3322175 | Msa1173140:intron | 50.0% |
| !! | GATCTTGCTATTGTGCCACC+AGG | - | chr8_1:3322256-3322275 | Msa1173140:intron | 50.0% |
| !! | TCCTCTTCCTTGGTGCTTTG+AGG | - | chr8_1:3322337-3322356 | Msa1173140:CDS | 50.0% |
| ! | TCCTCAAAGCACCAAGGAAG+AGG | + | chr8_1:3322341-3322360 | None:intergenic | 50.0% |
| GCTGGGAGGAAGAAAGAAGA+AGG | - | chr8_1:3322948-3322967 | Msa1173140:CDS | 50.0% | |
| CGAGCCTGAAGACGATTGTA+TGG | - | chr8_1:3323415-3323434 | Msa1173140:CDS | 50.0% | |
| TGAACCGAAGTCTTCTGGTC+TGG | - | chr8_1:3323739-3323758 | Msa1173140:CDS | 50.0% | |
| CGAAGTCTTCTGGTCTGGTA+TGG | - | chr8_1:3323744-3323763 | Msa1173140:CDS | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr8_1:3324421-3324440 | Msa1173140:intron | 50.0% |
| ! | GGTGTTGGAGGTTGCAATGA+AGG | - | chr8_1:3324527-3324546 | Msa1173140:intron | 50.0% |
| TGGCAATTCCGCCTTCATTG+CGG | + | chr8_1:3324589-3324608 | None:intergenic | 50.0% | |
| TGAGAAAGAAGAGGATGGGG+TGG | - | chr8_1:3324742-3324761 | Msa1173140:intron | 50.0% | |
| AGAGGATGGGGTGGTGAAAA+TGG | - | chr8_1:3324751-3324770 | Msa1173140:intron | 50.0% | |
| !! | GCTGATTCGATGACTTCGCC+TGG | + | chr8_1:3319374-3319393 | None:intergenic | 55.0% |
| !! | TCTTCGCCGAGCTTTTGAGG+TGG | + | chr8_1:3319398-3319417 | None:intergenic | 55.0% |
| ATCGGAGTCCCACATTGCCA+AGG | - | chr8_1:3319825-3319844 | Msa1173140:intron | 55.0% | |
| GCCCAAGCACACACTCGTTA+AGG | + | chr8_1:3319970-3319989 | None:intergenic | 55.0% | |
| GTATGGATTCGCGGTGAGCT+CGG | + | chr8_1:3320310-3320329 | None:intergenic | 55.0% | |
| CGTTTCTTGGATCACGGTGG+TGG | - | chr8_1:3320531-3320550 | Msa1173140:intron | 55.0% | |
| GGGAAAGGGAATGATCGACC+CGG | - | chr8_1:3320598-3320617 | Msa1173140:intron | 55.0% | |
| GTTGCAGAAACTCCGGAAGG+AGG | - | chr8_1:3320861-3320880 | Msa1173140:intron | 55.0% | |
| ! | AGAACGAGAGGCGTACACTG+AGG | + | chr8_1:3321094-3321113 | None:intergenic | 55.0% |
| TTCACTCCCCTTCTCCCCAA+AGG | + | chr8_1:3321244-3321263 | None:intergenic | 55.0% | |
| GGGTGCTTTCACAGCCAATG+AGG | - | chr8_1:3321395-3321414 | Msa1173140:intron | 55.0% | |
| GCAACCCTCACCTTACAAGC+CGG | + | chr8_1:3324429-3324448 | None:intergenic | 55.0% | |
| CACAATTAGGCGGCTAGGGA+CGG | - | chr8_1:3324562-3324581 | Msa1173140:intron | 55.0% | |
| CGGTGAGCTCGGCAGATTCA+CGG | + | chr8_1:3320299-3320318 | None:intergenic | 60.0% | |
| AAGGGGAGTGAAGCTGGCAG+CGG | - | chr8_1:3321252-3321271 | Msa1173140:intron | 60.0% | |
| CGTCCCTAGCCGCCTAATTG+TGG | + | chr8_1:3324564-3324583 | None:intergenic | 60.0% | |
| CTAGGGACGGACCGCAATGA+AGG | - | chr8_1:3324575-3324594 | Msa1173140:intron | 60.0% | |
| GACAGCGCAGCTCCTTCTGA+TGG | - | chr8_1:3324791-3324810 | Msa1173140:CDS | 60.0% | |
| AGCGCAGCTCCTTCTGATGG+CGG | - | chr8_1:3324794-3324813 | Msa1173140:CDS | 60.0% | |
| GGGGAGAAGGGGAGTGAAGC+TGG | - | chr8_1:3321246-3321265 | Msa1173140:intron | 65.0% | |
| AGGGGAGTGAAGCTGGCAGC+GGG | - | chr8_1:3321253-3321272 | Msa1173140:intron | 65.0% | |
| GGGACGGACCGCAATGAAGG+CGG | - | chr8_1:3324578-3324597 | Msa1173140:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 3319300 | 3325000 | 3319300 | ID=Msa1173140;Name=Msa1173140 |
| chr8_1 | mRNA | 3319300 | 3325000 | 3319300 | ID=Msa1173140-mRNA-1;Parent=Msa1173140;Name=Msa1173140-mRNA-1;_AED=0.06;_eAED=0.06;_QI=26|1|1|1|1|1|13|162|581 |
| chr8_1 | exon | 3319300 | 3319569 | 3319300 | ID=Msa1173140-mRNA-1:exon:1233;Parent=Msa1173140-mRNA-1 |
| chr8_1 | exon | 3319969 | 3320068 | 3319969 | ID=Msa1173140-mRNA-1:exon:1232;Parent=Msa1173140-mRNA-1 |
| chr8_1 | exon | 3320160 | 3320287 | 3320160 | ID=Msa1173140-mRNA-1:exon:1231;Parent=Msa1173140-mRNA-1 |
| chr8_1 | exon | 3321031 | 3321177 | 3321031 | ID=Msa1173140-mRNA-1:exon:1230;Parent=Msa1173140-mRNA-1 |
| chr8_1 | exon | 3321275 | 3321397 | 3321275 | ID=Msa1173140-mRNA-1:exon:1229;Parent=Msa1173140-mRNA-1 |
| chr8_1 | exon | 3321979 | 3322154 | 3321979 | ID=Msa1173140-mRNA-1:exon:1228;Parent=Msa1173140-mRNA-1 |
| chr8_1 | exon | 3322276 | 3322365 | 3322276 | ID=Msa1173140-mRNA-1:exon:1227;Parent=Msa1173140-mRNA-1 |
| chr8_1 | exon | 3322868 | 3323062 | 3322868 | ID=Msa1173140-mRNA-1:exon:1226;Parent=Msa1173140-mRNA-1 |
| chr8_1 | exon | 3323203 | 3323283 | 3323203 | ID=Msa1173140-mRNA-1:exon:1225;Parent=Msa1173140-mRNA-1 |
| chr8_1 | exon | 3323394 | 3323474 | 3323394 | ID=Msa1173140-mRNA-1:exon:1224;Parent=Msa1173140-mRNA-1 |
| chr8_1 | exon | 3323660 | 3323905 | 3323660 | ID=Msa1173140-mRNA-1:exon:1223;Parent=Msa1173140-mRNA-1 |
| chr8_1 | exon | 3324603 | 3324689 | 3324603 | ID=Msa1173140-mRNA-1:exon:1222;Parent=Msa1173140-mRNA-1 |
| chr8_1 | exon | 3324791 | 3325000 | 3324791 | ID=Msa1173140-mRNA-1:exon:1221;Parent=Msa1173140-mRNA-1 |
| chr8_1 | five_prime_UTR | 3324975 | 3325000 | 3324975 | ID=Msa1173140-mRNA-1:five_prime_utr;Parent=Msa1173140-mRNA-1 |
| chr8_1 | CDS | 3324791 | 3324974 | 3324791 | ID=Msa1173140-mRNA-1:cds;Parent=Msa1173140-mRNA-1 |
| chr8_1 | CDS | 3324603 | 3324689 | 3324603 | ID=Msa1173140-mRNA-1:cds;Parent=Msa1173140-mRNA-1 |
| chr8_1 | CDS | 3323660 | 3323905 | 3323660 | ID=Msa1173140-mRNA-1:cds;Parent=Msa1173140-mRNA-1 |
| chr8_1 | CDS | 3323394 | 3323474 | 3323394 | ID=Msa1173140-mRNA-1:cds;Parent=Msa1173140-mRNA-1 |
| chr8_1 | CDS | 3323203 | 3323283 | 3323203 | ID=Msa1173140-mRNA-1:cds;Parent=Msa1173140-mRNA-1 |
| chr8_1 | CDS | 3322868 | 3323062 | 3322868 | ID=Msa1173140-mRNA-1:cds;Parent=Msa1173140-mRNA-1 |
| chr8_1 | CDS | 3322276 | 3322365 | 3322276 | ID=Msa1173140-mRNA-1:cds;Parent=Msa1173140-mRNA-1 |
| chr8_1 | CDS | 3321979 | 3322154 | 3321979 | ID=Msa1173140-mRNA-1:cds;Parent=Msa1173140-mRNA-1 |
| chr8_1 | CDS | 3321275 | 3321397 | 3321275 | ID=Msa1173140-mRNA-1:cds;Parent=Msa1173140-mRNA-1 |
| chr8_1 | CDS | 3321031 | 3321177 | 3321031 | ID=Msa1173140-mRNA-1:cds;Parent=Msa1173140-mRNA-1 |
| chr8_1 | CDS | 3320160 | 3320287 | 3320160 | ID=Msa1173140-mRNA-1:cds;Parent=Msa1173140-mRNA-1 |
| chr8_1 | CDS | 3319969 | 3320068 | 3319969 | ID=Msa1173140-mRNA-1:cds;Parent=Msa1173140-mRNA-1 |
| chr8_1 | CDS | 3319462 | 3319569 | 3319462 | ID=Msa1173140-mRNA-1:cds;Parent=Msa1173140-mRNA-1 |
| chr8_1 | three_prime_UTR | 3319300 | 3319461 | 3319300 | ID=Msa1173140-mRNA-1:three_prime_utr;Parent=Msa1173140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
