AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0582190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0582190 MtrunA17_Chr4g0030551 98.352 546 8 1 1 545 1 546 0.0 1092
Msa0582190 MtrunA17_Chr2g0327711 78.664 539 109 4 12 545 7 544 0.0 833
Msa0582190 MtrunA17_Chr7g0263421 59.733 524 207 2 22 545 1 520 0.0 610
Msa0582190 MtrunA17_Chr7g0276681 57.089 529 215 7 17 545 30 546 0.0 566
Msa0582190 MtrunA17_Chr1g0212971 46.655 553 255 9 16 545 58 593 1.72e-154 454
Msa0582190 MtrunA17_Chr1g0161231 43.833 527 271 8 35 545 14 531 5.77e-146 430
Msa0582190 MtrunA17_Chr8g0391711 45.306 490 248 7 66 545 59 538 1.48e-139 414
Msa0582190 MtrunA17_Chr7g0263471 43.693 547 268 9 19 545 56 582 4.69e-129 389
Msa0582190 MtrunA17_Chr2g0331191 26.335 562 316 14 28 513 67 606 3.12e-41 157
Msa0582190 MtrunA17_Chr2g0331191 25.781 256 183 4 32 286 2 251 1.74e-17 85.9
Msa0582190 MtrunA17_Chr2g0331201 27.203 522 283 15 32 477 71 571 4.15e-33 134
Msa0582190 MtrunA17_Chr2g0331201 23.016 252 148 4 72 288 38 278 1.96e-18 89.0
Msa0582190 MtrunA17_Chr5g0439161 26.134 463 285 14 67 490 207 651 7.63e-19 90.5
Msa0582190 MtrunA17_Chr3g0122941 26.761 284 177 10 35 294 109 385 1.80e-16 82.8
Msa0582190 MtrunA17_Chr3g0122941 33.500 200 121 5 58 248 94 290 8.64e-16 80.5
Msa0582190 MtrunA17_Chr3g0122941 28.571 196 122 4 100 282 100 290 2.24e-13 72.8
Msa0582190 MtrunA17_Chr7g0233331 24.041 391 232 11 74 431 9 367 2.09e-16 81.3
Msa0582190 MtrunA17_Chr6g0458951 33.171 205 116 6 108 294 192 393 3.18e-16 82.0
Msa0582190 MtrunA17_Chr8g0369921 23.220 323 212 5 74 383 10 309 3.27e-16 81.3
Msa0582190 MtrunA17_Chr8g0376971 27.111 225 146 3 108 314 188 412 1.21e-15 80.1
Msa0582190 MtrunA17_Chr8g0376971 30.769 195 119 3 70 248 102 296 1.04e-14 77.0
Msa0582190 MtrunA17_Chr5g0439361 23.280 378 255 8 123 479 5 368 1.30e-15 79.0
Msa0582190 MtrunA17_Chr1g0211241 30.000 190 130 3 109 298 139 325 1.93e-15 79.3
Msa0582190 MtrunA17_Chr5g0418551 33.750 160 101 4 143 300 58 214 1.73e-14 73.6
Msa0582190 MtrunA17_Chr8g0367671 23.154 298 180 6 108 385 47 315 2.07e-14 75.5
Msa0582190 MtrunA17_Chr3g0136651 25.228 329 173 9 107 383 3 310 3.10e-14 75.1
Msa0582190 MtrunA17_Chr5g0439351 20.479 459 290 8 62 479 261 685 5.98e-14 74.7
Msa0582190 MtrunA17_Chr8g0364031 25.610 246 167 3 77 309 13 255 6.40e-14 73.9
Msa0582190 MtrunA17_Chr8g0370361 23.913 322 176 7 109 383 11 310 6.45e-14 73.9
Msa0582190 MtrunA17_Chr5g0439191 33.766 154 93 5 135 280 1 153 6.95e-14 70.1
Msa0582190 MtrunA17_Chr1g0178581 25.767 326 171 9 106 383 9 311 7.27e-14 73.9
Msa0582190 MtrunA17_Chr8g0361991 25.581 215 153 3 109 320 11 221 9.58e-14 73.6
Msa0582190 MtrunA17_Chr2g0328031 28.095 210 126 4 71 261 12 215 3.23e-13 72.0
Msa0582190 MtrunA17_Chr3g0083331 22.468 316 209 6 104 383 5 320 3.40e-13 71.6
Msa0582190 MtrunA17_Chr7g0262731 26.378 254 131 6 103 305 7 255 5.88e-13 71.6
Msa0582190 MtrunA17_Chr5g0409271 32.394 213 117 7 101 312 8 194 9.53e-13 68.6
Msa0582190 MtrunA17_Chr8g0353311 24.242 330 172 9 107 383 12 316 1.69e-12 69.7
Msa0582190 MtrunA17_Chr2g0293861 32.680 153 94 5 136 280 27 178 4.51e-12 65.5
Msa0582190 MtrunA17_Chr1g0196261 29.018 224 131 10 99 298 210 429 7.10e-12 67.8
Msa0582190 MtrunA17_Chr4g0064931 31.606 193 123 6 109 298 40 226 8.98e-12 67.8
Msa0582190 MtrunA17_Chr6g0461061 28.374 289 170 13 34 316 246 503 9.83e-12 67.4
Msa0582190 MtrunA17_Chr6g0461061 30.811 185 105 7 29 213 308 469 8.58e-11 64.7
Msa0582190 MtrunA17_Chr8g0366431 22.420 281 170 6 173 429 32 288 1.02e-11 66.6
Msa0582190 MtrunA17_Chr4g0063141 30.357 168 112 4 136 303 548 710 1.47e-11 67.4
Msa0582190 MtrunA17_Chr4g0031491 26.512 215 136 5 68 261 3 216 1.63e-11 66.6
Msa0582190 MtrunA17_Chr8g0354071 22.515 342 216 9 116 431 2 320 2.40e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0582190 AT1G07710.2 69.343 548 160 3 1 545 1 543 0.0 729
Msa0582190 AT1G07710.1 69.343 548 160 3 1 545 1 543 0.0 729
Msa0582190 AT5G60070.1 65.018 546 179 7 7 545 8 548 0.0 686
Msa0582190 AT5G02620.4 61.090 532 190 4 19 545 5 524 0.0 635
Msa0582190 AT5G02620.1 61.090 532 190 4 19 545 5 524 0.0 635
Msa0582190 AT5G02620.3 61.090 532 190 4 19 545 5 524 0.0 635
Msa0582190 AT5G02620.5 58.739 555 189 5 19 545 5 547 0.0 624
Msa0582190 AT5G02620.2 58.739 555 189 5 19 545 5 547 0.0 624
Msa0582190 AT2G31820.1 56.215 539 223 7 11 545 133 662 0.0 572
Msa0582190 AT1G05640.1 56.877 538 217 8 15 545 98 627 0.0 556
Msa0582190 AT3G12360.2 46.182 550 258 11 16 545 47 578 3.40e-147 436
Msa0582190 AT3G12360.1 46.182 550 258 11 16 545 59 590 3.78e-147 436
Msa0582190 AT3G09550.1 44.424 547 269 9 19 545 76 607 1.65e-136 409
Msa0582190 AT3G09550.3 44.424 547 269 9 19 545 76 607 1.65e-136 409
Msa0582190 AT3G09550.2 44.424 547 269 9 19 545 83 614 3.01e-136 409
Msa0582190 AT2G01680.1 44.444 486 248 4 35 506 14 491 1.90e-135 404
Msa0582190 AT2G24600.3 26.411 496 317 17 32 500 72 546 2.45e-38 149
Msa0582190 AT2G24600.4 26.411 496 317 17 32 500 72 546 2.45e-38 149
Msa0582190 AT1G34050.1 27.054 499 316 13 21 506 75 538 3.63e-38 148
Msa0582190 AT5G54710.2 25.743 505 336 12 32 522 148 627 4.74e-36 142
Msa0582190 AT5G54710.2 27.706 231 155 4 94 322 5 225 7.99e-13 71.6
Msa0582190 AT5G54710.2 23.958 288 177 5 32 290 19 293 1.20e-12 70.9
Msa0582190 AT5G54710.1 25.743 505 336 12 32 522 103 582 5.20e-36 142
Msa0582190 AT1G10340.1 24.178 517 295 13 72 500 39 546 4.29e-32 130
Msa0582190 AT1G10340.2 23.892 519 333 13 31 500 37 542 7.81e-32 130
Msa0582190 AT4G03500.1 24.417 557 333 16 1 485 59 599 5.26e-29 122
Msa0582190 AT4G03500.2 24.638 552 330 16 4 485 41 576 6.69e-29 121
Msa0582190 AT4G03500.3 24.638 552 330 16 4 485 41 576 6.69e-29 121
Msa0582190 AT4G03460.1 26.810 373 224 9 67 428 190 524 2.59e-27 116
Msa0582190 AT4G03460.1 33.824 136 79 2 134 258 75 210 5.30e-13 72.0
Msa0582190 AT4G03460.2 26.810 373 224 9 67 428 158 492 2.70e-27 116
Msa0582190 AT4G03470.1 24.848 495 318 15 27 490 149 620 3.25e-27 116
Msa0582190 AT4G03490.5 27.002 437 270 11 72 499 170 566 2.05e-26 114
Msa0582190 AT4G03490.4 27.002 437 270 11 72 499 180 576 2.15e-26 114
Msa0582190 AT4G03490.3 27.002 437 270 11 72 499 180 576 2.19e-26 114
Msa0582190 AT4G14390.1 26.179 424 273 10 33 427 168 580 1.23e-25 112
Msa0582190 AT4G14390.2 26.005 423 274 10 33 427 149 560 1.29e-25 111
Msa0582190 AT4G14390.4 26.005 423 274 10 33 427 168 579 1.38e-25 111
Msa0582190 AT2G24600.2 26.615 387 247 12 32 398 72 441 1.56e-23 104
Msa0582190 AT2G24600.1 26.615 387 247 12 32 398 72 441 1.56e-23 104
Msa0582190 AT4G03480.2 26.302 384 222 10 67 428 309 653 2.55e-23 104
Msa0582190 AT4G03480.2 24.542 273 186 7 34 286 194 466 1.59e-11 67.4
Msa0582190 AT4G03480.1 26.302 384 222 10 67 428 312 656 2.68e-23 104
Msa0582190 AT4G03480.1 24.638 276 185 6 34 286 194 469 2.75e-12 70.1
Msa0582190 AT5G50140.1 23.892 519 307 17 27 516 57 516 3.62e-23 103
Msa0582190 AT1G03670.1 21.864 558 333 15 4 471 33 577 5.03e-23 103
Msa0582190 AT5G54700.2 26.488 336 176 10 165 485 23 302 8.58e-23 100
Msa0582190 AT4G10720.2 25.672 335 206 8 109 426 41 349 3.86e-22 99.4
Msa0582190 AT4G05040.3 24.941 425 284 9 30 428 148 563 6.16e-22 100
Msa0582190 AT4G05040.3 28.161 174 110 3 140 298 82 255 8.36e-11 65.1
Msa0582190 AT4G05040.2 24.941 425 284 9 30 428 148 563 6.16e-22 100
Msa0582190 AT4G05040.2 28.161 174 110 3 140 298 82 255 8.36e-11 65.1
Msa0582190 AT4G05040.5 24.941 425 284 9 30 428 148 563 6.16e-22 100
Msa0582190 AT4G05040.5 28.161 174 110 3 140 298 82 255 8.36e-11 65.1
Msa0582190 AT4G05040.4 24.941 425 284 9 30 428 148 563 6.16e-22 100
Msa0582190 AT4G05040.4 28.161 174 110 3 140 298 82 255 8.36e-11 65.1
Msa0582190 AT4G05040.1 24.941 425 284 9 30 428 148 563 6.16e-22 100
Msa0582190 AT4G05040.1 28.161 174 110 3 140 298 82 255 8.36e-11 65.1
Msa0582190 AT4G05040.6 24.941 425 284 9 30 428 148 563 6.16e-22 100
Msa0582190 AT4G05040.6 28.161 174 110 3 140 298 82 255 8.36e-11 65.1
Msa0582190 AT4G05040.7 24.941 425 284 9 30 428 148 563 6.16e-22 100
Msa0582190 AT4G05040.7 28.161 174 110 3 140 298 82 255 8.36e-11 65.1
Msa0582190 AT4G10720.1 27.148 291 177 6 109 383 41 312 1.84e-21 97.8
Msa0582190 AT4G03490.2 23.333 480 301 15 62 499 64 518 5.74e-20 94.4
Msa0582190 AT4G03490.1 23.333 480 301 15 62 499 74 528 8.03e-20 93.6
Msa0582190 AT4G14400.2 24.336 452 253 11 33 428 71 489 1.14e-19 93.2
Msa0582190 AT4G14400.3 24.336 452 253 11 33 428 71 489 1.14e-19 93.2
Msa0582190 AT4G14400.1 24.336 452 253 11 33 428 137 555 1.48e-19 92.8
Msa0582190 AT5G51160.1 25.203 369 219 11 135 460 43 397 3.04e-19 90.9
Msa0582190 AT4G14390.3 25.661 378 248 9 33 382 149 521 4.13e-19 90.9
Msa0582190 AT5G54700.1 25.310 403 187 14 101 485 33 339 6.75e-19 90.1
Msa0582190 AT4G03450.2 24.204 471 310 13 27 467 101 554 8.76e-19 90.5
Msa0582190 AT4G03450.2 24.176 273 184 6 35 290 40 306 2.60e-11 66.6
Msa0582190 AT4G03450.1 24.204 471 310 13 27 467 101 554 1.62e-18 89.7
Msa0582190 AT4G03450.1 24.176 273 184 6 35 290 40 306 3.48e-11 66.2
Msa0582190 AT4G03440.1 25.532 376 238 13 67 428 269 616 2.94e-17 85.9
Msa0582190 AT4G03440.2 25.532 376 238 13 67 428 262 609 3.63e-17 85.5
Msa0582190 AT4G03440.3 25.532 376 238 13 67 428 262 609 3.63e-17 85.5
Msa0582190 AT5G15500.2 24.267 375 210 9 108 428 5 359 5.15e-17 84.3
Msa0582190 AT2G03430.1 32.353 204 131 6 56 257 33 231 1.20e-15 77.0
Msa0582190 AT2G03430.1 34.759 187 109 7 64 245 8 186 3.46e-13 70.1
Msa0582190 AT2G03430.1 31.818 198 119 9 109 298 16 205 2.28e-11 64.7
Msa0582190 AT3G04140.1 27.465 284 164 10 35 280 106 385 6.90e-15 78.2
Msa0582190 AT3G04140.1 30.542 203 120 4 100 281 97 299 1.03e-13 74.3
Msa0582190 AT3G01750.2 27.823 248 138 7 35 248 109 349 7.67e-15 78.2
Msa0582190 AT3G01750.1 27.823 248 138 7 35 248 109 349 7.67e-15 78.2
Msa0582190 AT5G54620.1 26.724 232 154 5 109 325 41 271 1.04e-12 70.5
Msa0582190 AT5G54620.1 28.188 149 105 1 116 262 12 160 1.50e-11 67.0
Msa0582190 AT5G20350.1 30.542 203 132 6 99 298 25 221 1.07e-12 71.2
Msa0582190 AT1G14500.1 24.359 234 159 4 109 325 41 273 1.24e-12 70.5
Msa0582190 AT1G14500.1 27.922 154 107 3 112 262 8 160 1.79e-11 66.6
Msa0582190 AT5G57740.1 28.378 222 120 6 109 294 55 273 1.65e-12 70.5
Msa0582190 AT4G19150.1 35.833 120 75 2 109 228 20 137 2.40e-12 67.4
Msa0582190 AT2G28840.1 29.341 167 103 4 109 261 50 215 5.49e-12 68.6
Msa0582190 AT2G26650.1 34.395 157 97 5 104 260 550 700 6.90e-12 68.9
Msa0582190 AT2G26650.2 34.395 157 97 5 104 260 445 595 8.04e-12 68.6
Msa0582190 AT3G04710.3 28.571 287 185 9 10 294 227 495 2.84e-11 66.6
Msa0582190 AT3G04710.1 28.571 287 185 8 10 294 3 271 3.35e-11 65.9
Msa0582190 AT2G14255.1 30.201 149 101 3 109 256 95 241 3.61e-11 66.2
Msa0582190 AT2G25600.1 29.000 200 129 7 112 311 552 738 6.81e-11 65.9

Find 124 sgRNAs with CRISPR-Local

Find 636 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAATTGGGGTAACTATTAT+TGG 0.156648 4_2:-336150 Msa0582190:CDS
AATAAACATGGTTGATAATA+AGG 0.174079 4_2:-337741 Msa0582190:CDS
CATTGGGTACTATGAGTTAT+TGG 0.186716 4_2:-336107 Msa0582190:CDS
TTCTTCCTTTGAGCCCTTAC+TGG 0.196107 4_2:+338942 None:intergenic
CTATGAGTTATTGGGTTATT+AGG 0.231803 4_2:-336098 Msa0582190:CDS
TCAACCATGTTTATTGTTGA+TGG 0.242519 4_2:+337749 None:intergenic
TACCTGAGTTCTTCCCTTCC+TGG 0.243726 4_2:+337694 None:intergenic
GCTGCTAAACAAGGGGATTT+AGG 0.260704 4_2:-338648 Msa0582190:intron
ACAAAAGGAGTTCATTAGTT+TGG 0.269564 4_2:-339017 Msa0582190:five_prime_UTR
ACCCAATGTTGTAGCCATTA+TGG 0.293380 4_2:+336122 None:intergenic
AATTCTCTTGTTGCAGCTTT+CGG 0.309465 4_2:+336660 None:intergenic
CTTTATGTTGCTGCTGAGTA+TGG 0.312082 4_2:-338762 Msa0582190:CDS
TGTTACAAGGACTGATAAAA+AGG 0.312944 4_2:-337843 Msa0582190:CDS
CAATTGGGGTAACTATTATT+GGG 0.329062 4_2:-336149 Msa0582190:CDS
ATGGTTATGTTGATATGGTT+AGG 0.342881 4_2:-338743 Msa0582190:CDS
CTGCATTCGGCTGCAAGAAA+TGG 0.353753 4_2:-337911 Msa0582190:CDS
AAACAAAGGTGGCTTGCAAT+TGG 0.357257 4_2:-336165 Msa0582190:CDS
AACAAAGGTGGCTTGCAATT+GGG 0.360089 4_2:-336164 Msa0582190:CDS
ATTGGGTACTATGAGTTATT+GGG 0.363533 4_2:-336106 Msa0582190:CDS
CAGATTATCAAGTTGATACT+TGG 0.370218 4_2:-336822 Msa0582190:CDS
TGAGTATGGTTATGTTGATA+TGG 0.383585 4_2:-338748 Msa0582190:CDS
TGGGAACATGGCTTCTTTGA+AGG 0.392889 4_2:-338859 Msa0582190:CDS
CAAACACGAAGAAGCGTTCA+AGG 0.397506 4_2:-336579 Msa0582190:CDS
GTTTGGAGAATTGTATTCAA+TGG 0.398213 4_2:-339000 Msa0582190:exon
TATTATTGGGACTACCATAA+TGG 0.409865 4_2:-336136 Msa0582190:CDS
ACCATAATGGCTACAACATT+GGG 0.411626 4_2:-336123 Msa0582190:CDS
TTTCATCTCCCTCGCGGTTG+TGG 0.414269 4_2:-336325 Msa0582190:CDS
TACCATAATGGCTACAACAT+TGG 0.414943 4_2:-336124 Msa0582190:CDS
ATTCAGAATGAGCTTCCATT+AGG 0.417012 4_2:+338071 None:intergenic
GGCTGCAAGAAATGGACATT+TGG 0.423249 4_2:-337903 Msa0582190:CDS
TCTTTGAAGGATACAGTTGA+TGG 0.424259 4_2:-338846 Msa0582190:CDS
GCTGGAATTAAAGCAAGAAA+TGG 0.432637 4_2:-338690 Msa0582190:CDS
TTACATTCGGCAGCAAGAGC+TGG 0.434837 4_2:-338879 Msa0582190:CDS
AGCCTCAGGCTGCACCAGTA+AGG 0.434924 4_2:-338956 Msa0582190:CDS
TATTATGATCTTGCTGATGC+TGG 0.442983 4_2:-338708 Msa0582190:CDS
ATAAACATGGTTGATAATAA+GGG 0.448264 4_2:-337740 Msa0582190:CDS
GCAGCCATCTTCACCGTCCC+AGG 0.449913 4_2:-336459 Msa0582190:CDS
TTTAGTGGAACACACAAGTA+AGG 0.450272 4_2:-339395 Msa0582190:intron
CGATGATACGCCGTTACATT+CGG 0.459070 4_2:-338892 Msa0582190:CDS
TGGTTATGTTGATATGGTTA+GGG 0.459988 4_2:-338742 Msa0582190:CDS
GGCGCTTCACATGGCTGTGA+AGG 0.462145 4_2:-337813 Msa0582190:CDS
GGATCGTCAACGAATTGGCC+TGG 0.464981 4_2:+336441 None:intergenic
AGCTGAAACTGTGCAGCCTC+AGG 0.466637 4_2:-338970 Msa0582190:CDS
AGTATTCATCGTGTTTGATT+CGG 0.466809 4_2:-336355 Msa0582190:CDS
GATATACATCATGCACCAAC+AGG 0.476088 4_2:+345489 None:intergenic
TTAGACACAGCTGAGAAAAC+AGG 0.479957 4_2:-336750 Msa0582190:CDS
TGGTAAAACAGCTCTGCATT+CGG 0.480032 4_2:-337924 Msa0582190:CDS
AAAATGACGAAACAATTGAC+AGG 0.480397 4_2:-338921 Msa0582190:CDS
ACAAAGGTGGCTTGCAATTG+GGG 0.480789 4_2:-336163 Msa0582190:CDS
GAAAATCTTCAATGGGAAGT+AGG 0.483651 4_2:-336050 Msa0582190:CDS
AGGGAACTAATATATGATGT+TGG 0.483762 4_2:+339447 None:intergenic
GCCTCAGGCTGCACCAGTAA+GGG 0.485466 4_2:-338955 Msa0582190:CDS
GAGTATAAGAAAATCTTCAA+TGG 0.486162 4_2:-336058 Msa0582190:CDS
TAATAGATATTTCACTATCT+CGG 0.487002 4_2:+337985 None:intergenic
GCAACAATTGCTAGAAGTAA+TGG 0.488412 4_2:-337944 Msa0582190:CDS
ATTGTAGTAATAAGAACAAA+AGG 0.489282 4_2:-339032 Msa0582190:five_prime_UTR
TTGTGTTGCAGCTGTGTGTA+AGG 0.490259 4_2:+338015 None:intergenic
AGTATAAGAAAATCTTCAAT+GGG 0.497524 4_2:-336057 Msa0582190:CDS
AGCAAACATAGCTTCAGAAC+CGG 0.498856 4_2:-336385 Msa0582190:CDS
AGATATCGTAAAGATCCTAA+TGG 0.499307 4_2:-338086 Msa0582190:CDS
AAGCAAGTGTTGTGAAGTAG+TGG 0.505499 4_2:+345599 None:intergenic
TTAGGCATAGAATCAATTTG+AGG 0.507230 4_2:-336080 Msa0582190:CDS
AAGCTATGTTTGCTTCGCCA+AGG 0.508004 4_2:+336394 None:intergenic
GATCGTCAACGAATTGGCCT+GGG 0.508918 4_2:+336442 None:intergenic
CTTCATATTGCTGCTAAACA+AGG 0.509684 4_2:-338657 Msa0582190:CDS
TACATTCGGCAGCAAGAGCT+GGG 0.514491 4_2:-338878 Msa0582190:CDS
GTGAAATATCTATTAGAAGC+AGG 0.514806 4_2:-337977 Msa0582190:CDS
TGCAAGAAATGGACATTTGG+AGG 0.518560 4_2:-337900 Msa0582190:CDS
CATCTCCCTCGCGGTTGTGG+TGG 0.520207 4_2:-336322 Msa0582190:CDS
TTGGCCTGGGACGGTGAAGA+TGG 0.531539 4_2:+336455 None:intergenic
GCGATTCTTGAGAAGGAGCC+TGG 0.531890 4_2:-337869 Msa0582190:CDS
AGGAGCCTGGTGTTGTTACA+AGG 0.535008 4_2:-337856 Msa0582190:CDS
CGAAAGCAACCGTTGCTATG+AGG 0.535432 4_2:+336481 None:intergenic
CTTGGACAAAGTGAAACAAA+TGG 0.535956 4_2:-336804 Msa0582190:CDS
GCGCTTCACATGGCTGTGAA+GGG 0.537881 4_2:-337812 Msa0582190:CDS
CAAAGCAAAGAAGCAAATGA+TGG 0.544079 4_2:-336271 Msa0582190:CDS
TTTGACGAGTGTGTTCTAGT+TGG 0.546084 4_2:+336598 None:intergenic
ATGCACCAACAGGAAACAAA+AGG 0.546435 4_2:+345499 None:intergenic
GCCCTTACTGGTGCAGCCTG+AGG 0.548134 4_2:+338954 None:intergenic
TACAGTTGATGGTGCTGAAG+AGG 0.548363 4_2:-338835 Msa0582190:CDS
TGTAAGGCGGTGGTGTTGGA+TGG 0.549333 4_2:+338031 None:intergenic
AGCTATGTTTGCTTCGCCAA+GGG 0.552047 4_2:+336395 None:intergenic
GGCAGCAAGAGCTGGGAACA+TGG 0.556799 4_2:-338871 Msa0582190:CDS
CGCTTCACATGGCTGTGAAG+GGG 0.560548 4_2:-337811 Msa0582190:CDS
TGTGAAAGCGATTCTTGAGA+AGG 0.565310 4_2:-337876 Msa0582190:CDS
CTAATATATGATGTTGGTGT+AGG 0.567365 4_2:+339453 None:intergenic
GCAGAGTCTTGTGGTAGTAG+AGG 0.567525 4_2:-337789 Msa0582190:CDS
TGTGTGTAAGGCGGTGGTGT+TGG 0.569536 4_2:+338027 None:intergenic
ATTAGAAGCAGGTAGTAGCT+TGG 0.570550 4_2:-337966 Msa0582190:CDS
CTGCACCAGTAAGGGCTCAA+AGG 0.574302 4_2:-338947 Msa0582190:CDS
GAGGACCGCGACGACTGTTG+TGG 0.574532 4_2:+336500 None:intergenic
TTCATATTGCTGCTAAACAA+GGG 0.576566 4_2:-338656 Msa0582190:CDS
TGCAGCTGTGTGTAAGGCGG+TGG 0.578132 4_2:+338021 None:intergenic
ACAGTTGATGGTGCTGAAGA+GGG 0.580772 4_2:-338834 Msa0582190:CDS
ATATTTGCAAAGCAGAATCA+AGG 0.582207 4_2:-338798 Msa0582190:CDS
AACCAGGAAGGGAAGAACTC+AGG 0.589165 4_2:-337696 Msa0582190:intron
TCAGTCCTTGTAACAACACC+AGG 0.589412 4_2:+337851 None:intergenic
CTCAACAAAATGCACACAGA+AGG 0.589714 4_2:-336543 Msa0582190:CDS
GGCATGGCAGTAAACAAAAG+TGG 0.596158 4_2:-336783 Msa0582190:CDS
GCTCTTGCTGCCGAATGTAA+CGG 0.602344 4_2:+338882 None:intergenic
GGGACAGACGGCGCTTCACA+TGG 0.602708 4_2:-337822 Msa0582190:CDS
CTTCAATGGGAAGTAGGTCA+AGG 0.604224 4_2:-336044 Msa0582190:CDS
AATTGCACAATGGAAAAGAG+TGG 0.606592 4_2:+335912 None:intergenic
GAGTGTGTTCTAGTTGGTGA+TGG 0.607313 4_2:+336604 None:intergenic
TCATATTGCTGCTAAACAAG+GGG 0.612141 4_2:-338655 Msa0582190:CDS
TTGCATATAGCAACCAGGAA+GGG 0.612446 4_2:-337707 Msa0582190:CDS
CAGCGTTGCATATAGCAACC+AGG 0.616173 4_2:-337712 Msa0582190:CDS
TGTGAAGGGGCAGAGTCTTG+TGG 0.617503 4_2:-337798 Msa0582190:CDS
TTCTGAATTGTCAATGACTG+TGG 0.617789 4_2:-338056 Msa0582190:CDS
TTACACACAGCTGCAACACA+AGG 0.627719 4_2:-338013 Msa0582190:CDS
GTTGCATATAGCAACCAGGA+AGG 0.628632 4_2:-337708 Msa0582190:CDS
GTCAACGAATTGGCCTGGGA+CGG 0.629644 4_2:+336446 None:intergenic
ACAAAGTGAAACAAATGGCA+TGG 0.631554 4_2:-336799 Msa0582190:CDS
CTATTATTAACAAACTAATG+TGG 0.644964 4_2:-336248 Msa0582190:CDS
AAAAGCATTCTTACAGAACA+CGG 0.650500 4_2:-336714 Msa0582190:CDS
CGTCGCGGTCCTCATAGCAA+CGG 0.655824 4_2:-336490 Msa0582190:CDS
AGATCCATCAACAATAAACA+TGG 0.658313 4_2:-337753 Msa0582190:CDS
TTGAACCACCACAACCGCGA+GGG 0.673202 4_2:+336317 None:intergenic
AAATGACGAAACAATTGACA+GGG 0.680740 4_2:-338920 Msa0582190:CDS
TTTGCAAAGCAGAATCAAGG+TGG 0.681219 4_2:-338795 Msa0582190:CDS
AAACTCCACAACAGTCGTCG+CGG 0.698686 4_2:-336505 Msa0582190:CDS
ACGATGAATACTAGAAACGC+CGG 0.701308 4_2:+336366 None:intergenic
TGTTGCAGCTGTGTGTAAGG+CGG 0.703933 4_2:+338018 None:intergenic
TTTGAACCACCACAACCGCG+AGG 0.726688 4_2:+336316 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAATAAAATAAAAAA+TGG + chr4_2:342249-342268 None:intergenic 0.0%
!!! TCTAAATATTTTTACTATAT+TGG - chr4_2:336212-336231 Msa0582190:CDS 10.0%
!! ATTGTTTAATTATATAACTT+TGG - chr4_2:340106-340125 Msa0582190:intron 10.0%
!! ATATATATATATATATTCCA+TGG - chr4_2:344461-344480 Msa0582190:intron 10.0%
!! AGTAAAAATATTTAGAAGAA+AGG + chr4_2:336208-336227 None:intergenic 15.0%
!!! TAATACCATATTAATTTGAA+CGG + chr4_2:336580-336599 None:intergenic 15.0%
!!! TATTATTTTAATTAGAATGG+TGG + chr4_2:336647-336666 None:intergenic 15.0%
!! AAAAAAATTGAAGTAATTCT+TGG + chr4_2:338699-338718 None:intergenic 15.0%
!!! CTTCAATTTTTTTTTTGTTT+AGG - chr4_2:338706-338725 Msa0582190:CDS 15.0%
!! AAGTTAGATAATTATTTGAA+TGG + chr4_2:338931-338950 None:intergenic 15.0%
!! TTTAAAAATTAAGAACTAGT+GGG + chr4_2:339523-339542 None:intergenic 15.0%
!!! ACTAGTTCTTAATTTTTAAA+GGG - chr4_2:339523-339542 Msa0582190:intron 15.0%
!! TCATATAAATTAGAATTTAG+AGG + chr4_2:340050-340069 None:intergenic 15.0%
!!! GTTATTGATTATAACTATAT+TGG + chr4_2:340376-340395 None:intergenic 15.0%
!! ATTTATCCTTAATGTATTTA+GGG - chr4_2:340851-340870 Msa0582190:intron 15.0%
!!! TAATACCATATTAATTTGAA+CGG + chr4_2:336580-336599 None:intergenic 15.0%
!!! TATTATTTTAATTAGAATGG+TGG + chr4_2:336647-336666 None:intergenic 15.0%
!! TATATTAACATATACTATGT+TGG + chr4_2:342003-342022 None:intergenic 15.0%
!!! TTTTGTATTTTTGTTTTTGT+TGG - chr4_2:342421-342440 Msa0582190:intron 15.0%
!!! ATTTTCTATTATTCAAGTTT+AGG + chr4_2:343302-343321 None:intergenic 15.0%
!! GAAATTCAAATTTAACAGTT+TGG + chr4_2:336298-336317 None:intergenic 20.0%
!! GTATTATTACCATTCTAATA+TGG - chr4_2:336594-336613 Msa0582190:CDS 20.0%
!! TTCGATAATATATGATTCTT+CGG + chr4_2:336723-336742 None:intergenic 20.0%
!! AAGAATCATATATTATCGAA+GGG - chr4_2:336723-336742 Msa0582190:CDS 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG + chr4_2:337229-337248 None:intergenic 20.0%
!! AACTAGTAAGTGTTTATATA+TGG + chr4_2:337230-337249 None:intergenic 20.0%
!! ATATATAAACACTTACTAGT+TGG - chr4_2:337229-337248 Msa0582190:intron 20.0%
!! TATATAAACACTTACTAGTT+GGG - chr4_2:337230-337249 Msa0582190:intron 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG + chr4_2:337324-337343 None:intergenic 20.0%
!! TTGTATATTAGCAAATCTTA+TGG + chr4_2:337410-337429 None:intergenic 20.0%
!!! TAAGATTTGCTAATATACAA+AGG - chr4_2:337410-337429 Msa0582190:intron 20.0%
!!! TTTAGAATACACTTATGAAA+AGG + chr4_2:337539-337558 None:intergenic 20.0%
!! ATTAAGAATCGTTATTACAA+TGG + chr4_2:338065-338084 None:intergenic 20.0%
!! AGTAACATATTGTACTTAAA+TGG + chr4_2:338346-338365 None:intergenic 20.0%
!!! TATATTTGGATTTTGGAAAA+AGG + chr4_2:339226-339245 None:intergenic 20.0%
!! TTAAAAATTAAGAACTAGTG+GGG + chr4_2:339522-339541 None:intergenic 20.0%
!!! CTTTAAAAATTAAGAACTAG+TGG + chr4_2:339524-339543 None:intergenic 20.0%
!!! CACTAGTTCTTAATTTTTAA+AGG - chr4_2:339522-339541 Msa0582190:intron 20.0%
!!! ATTTTAAAACTTGAGTAACT+TGG + chr4_2:340140-340159 None:intergenic 20.0%
!!! AATTTTGAACATTTCATCAA+AGG - chr4_2:340233-340252 Msa0582190:intron 20.0%
!! GATTTATCCTTAATGTATTT+AGG - chr4_2:340850-340869 Msa0582190:intron 20.0%
!! GAAATTCAAATTTAACAGTT+TGG + chr4_2:336298-336317 None:intergenic 20.0%
!! GTATTATTACCATTCTAATA+TGG - chr4_2:336594-336613 Msa0582190:CDS 20.0%
!! TTCGATAATATATGATTCTT+CGG + chr4_2:336723-336742 None:intergenic 20.0%
!! AAGAATCATATATTATCGAA+GGG - chr4_2:336723-336742 Msa0582190:CDS 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG + chr4_2:337229-337248 None:intergenic 20.0%
!! AACTAGTAAGTGTTTATATA+TGG + chr4_2:337230-337249 None:intergenic 20.0%
!! ATATATAAACACTTACTAGT+TGG - chr4_2:337229-337248 Msa0582190:intron 20.0%
!! TATATAAACACTTACTAGTT+GGG - chr4_2:337230-337249 Msa0582190:intron 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG + chr4_2:337324-337343 None:intergenic 20.0%
!!! AAAAAAAGCATTGAGATTTA+AGG + chr4_2:342100-342119 None:intergenic 20.0%
!! CAGTGAAAAAAATAAATAAG+AGG + chr4_2:342160-342179 None:intergenic 20.0%
!! TTATTATGATGAATGCTTAA+AGG - chr4_2:342182-342201 Msa0582190:intron 20.0%
!! ATTGTAGTAATAAGAACAAA+AGG - chr4_2:342480-342499 Msa0582190:intron 20.0%
!!! AATTTCAGTTCTGTTTTTAT+TGG - chr4_2:343186-343205 Msa0582190:intron 20.0%
!! AATAATAGAAAATTGTTGCA+AGG - chr4_2:343309-343328 Msa0582190:intron 20.0%
!!! TATCTATTTTATTTTGAACC+AGG - chr4_2:343374-343393 Msa0582190:intron 20.0%
!!! ATCTATTTTATTTTGAACCA+GGG - chr4_2:343375-343394 Msa0582190:intron 20.0%
!! TAATAGATATTTCACTATCT+CGG + chr4_2:343530-343549 None:intergenic 20.0%
!!! AATAAACATGGTTGATAATA+AGG - chr4_2:343771-343790 Msa0582190:intron 20.0%
!!! ATAAACATGGTTGATAATAA+GGG - chr4_2:343772-343791 Msa0582190:intron 20.0%
!! ATTGTCATCACTTAAAATTT+CGG - chr4_2:343961-343980 Msa0582190:intron 20.0%
!! CTTTGAATAAAGATAAAGAA+GGG + chr4_2:344036-344055 None:intergenic 20.0%
!! ACTTTGAATAAAGATAAAGA+AGG + chr4_2:344037-344056 None:intergenic 20.0%
!! TTAACTCAATCCTAAAAAAT+CGG - chr4_2:344172-344191 Msa0582190:intron 20.0%
!!! ATTTTGAACAGAGTTTATAA+AGG + chr4_2:344217-344236 None:intergenic 20.0%
!! ATACAATTCAATTATGCATA+AGG + chr4_2:344595-344614 None:intergenic 20.0%
!! CTATTATTAACAAACTAATG+TGG - chr4_2:345264-345283 Msa0582190:intron 20.0%
!! AGTATAAGAAAATCTTCAAT+GGG - chr4_2:345455-345474 Msa0582190:five_prime_UTR 20.0%
! AAGAAGAAAAAGAACAAAAG+AGG + chr4_2:336177-336196 None:intergenic 25.0%
!!! ACCATATAGTATGTTGTTTT+TGG - chr4_2:336268-336287 Msa0582190:CDS 25.0%
! TCCAAAAACAACATACTATA+TGG + chr4_2:336272-336291 None:intergenic 25.0%
! GAAGAATCATATATTATCGA+AGG - chr4_2:336722-336741 Msa0582190:CDS 25.0%
!!! GAAACTTGTTAAAAACAAGT+CGG - chr4_2:336825-336844 Msa0582190:intron 25.0%
! GTTTCTTAATTGGATATATC+CGG - chr4_2:337003-337022 Msa0582190:intron 25.0%
! ATATAAACACTTACTAGTTG+GGG - chr4_2:337231-337250 Msa0582190:intron 25.0%
!! AATCGGTTATATTTGGATTT+TGG + chr4_2:339233-339252 None:intergenic 25.0%
! AAAATCCAAATATAACCGAT+TGG - chr4_2:339232-339251 Msa0582190:five_prime_UTR 25.0%
! TAAAGAAGTTATATCCTCAT+TGG + chr4_2:339353-339372 None:intergenic 25.0%
! ATGAGGATATAACTTCTTTA+AGG - chr4_2:339353-339372 Msa0582190:intron 25.0%
! TATGAACTTGGTTTATACAT+TGG + chr4_2:339395-339414 None:intergenic 25.0%
! TAAAAATTAAGAACTAGTGG+GGG + chr4_2:339521-339540 None:intergenic 25.0%
! CTATGATCACTTTAACATTT+AGG - chr4_2:339660-339679 Msa0582190:intron 25.0%
! CGATAAATAACGAAACATAT+AGG + chr4_2:339694-339713 None:intergenic 25.0%
!!! TTGTCTTATTTTTCGAACTT+GGG + chr4_2:339801-339820 None:intergenic 25.0%
!! AGAATTTTTGTTCTTAGACT+TGG - chr4_2:339855-339874 Msa0582190:intron 25.0%
!! GAATTTTTGTTCTTAGACTT+GGG - chr4_2:339856-339875 Msa0582190:intron 25.0%
! ATTCTCCTTCTATATAAGTT+GGG + chr4_2:340211-340230 None:intergenic 25.0%
! AATTCTCCTTCTATATAAGT+TGG + chr4_2:340212-340231 None:intergenic 25.0%
!!! ATTTTGATCCTATAAGAACA+AGG + chr4_2:340302-340321 None:intergenic 25.0%
!! TTCTTGCTTTAATTTACCAA+AGG - chr4_2:340407-340426 Msa0582190:intron 25.0%
!! TTAATTTACCAAAGGTGTAT+TGG - chr4_2:340415-340434 Msa0582190:intron 25.0%
! AACAAATGAAAAGGACAATA+CGG + chr4_2:340529-340548 None:intergenic 25.0%
!!! AGTATTGGAGATTTTTTGTA+CGG + chr4_2:340558-340577 None:intergenic 25.0%
! TAAAATCAGTTGTCAAGTAT+TGG + chr4_2:340573-340592 None:intergenic 25.0%
!!! TTTGTCTTTTTCAATTGTCA+AGG - chr4_2:340625-340644 Msa0582190:intron 25.0%
! ATCTCAATAAGTAACTTCTT+CGG - chr4_2:340882-340901 Msa0582190:intron 25.0%
!!! CGTCTTAAAATTGTTGTTTT+TGG - chr4_2:340924-340943 Msa0582190:intron 25.0%
! GAAGAATCATATATTATCGA+AGG - chr4_2:336722-336741 Msa0582190:CDS 25.0%
!!! GAAACTTGTTAAAAACAAGT+CGG - chr4_2:336825-336844 Msa0582190:intron 25.0%
! GTTTCTTAATTGGATATATC+CGG - chr4_2:337003-337022 Msa0582190:intron 25.0%
! ATATAAACACTTACTAGTTG+GGG - chr4_2:337231-337250 Msa0582190:intron 25.0%
!!! AAGGTCTTTTTTTTTGTTAC+AGG - chr4_2:342032-342051 Msa0582190:intron 25.0%
!!! AGGTCTTTTTTTTTGTTACA+GGG - chr4_2:342033-342052 Msa0582190:intron 25.0%
!! AGATTTAAGGATAGCTTTTA+GGG + chr4_2:342087-342106 None:intergenic 25.0%
!!! AATCTCAATGCTTTTTTTAG+TGG - chr4_2:342102-342121 Msa0582190:intron 25.0%
!! TTTTATCAGAGCAATGATTT+TGG - chr4_2:342263-342282 Msa0582190:intron 25.0%
!!! ATCTTCTTTGATTTGTTTCA+AGG - chr4_2:342360-342379 Msa0582190:intron 25.0%
! AGTAAATGTTAGCAGAATTA+TGG + chr4_2:343860-343879 None:intergenic 25.0%
! GACAATTTAATCAACAAAGA+TGG + chr4_2:343947-343966 None:intergenic 25.0%
!!! ACATTCTAAACCGATTTTTT+AGG + chr4_2:344185-344204 None:intergenic 25.0%
! TATGAAGTACAAATGGAATT+AGG + chr4_2:344435-344454 None:intergenic 25.0%
! ATAAGATCTGTGATAATTCT+TGG - chr4_2:344511-344530 Msa0582190:intron 25.0%
! TAAGATCTGTGATAATTCTT+GGG - chr4_2:344512-344531 Msa0582190:intron 25.0%
! TTGAATTGTATCTACCTATT+TGG - chr4_2:344604-344623 Msa0582190:intron 25.0%
!! AATTAACCTCTTTCAACTTT+TGG - chr4_2:344662-344681 Msa0582190:intron 25.0%
!!! TGTAAGAATGCTTTTTACTT+CGG + chr4_2:344793-344812 None:intergenic 25.0%
!!! TTTCCTTTAGGAACTTTTTT+TGG + chr4_2:345095-345114 None:intergenic 25.0%
! GAGTATAAGAAAATCTTCAA+TGG - chr4_2:345454-345473 Msa0582190:five_prime_UTR 25.0%
AGAATTACACCCTCAAAATA+TGG - chr4_2:336500-336519 Msa0582190:CDS 30.0%
CGAAACCGTTCAAATTAATA+TGG - chr4_2:336572-336591 Msa0582190:CDS 30.0%
! TTTCGGTGTAAAGAATCAAA+TGG - chr4_2:336891-336910 Msa0582190:intron 30.0%
! TTCGGTGTAAAGAATCAAAT+GGG - chr4_2:336892-336911 Msa0582190:intron 30.0%
TTACAAACTCTCCCTATAAA+AGG + chr4_2:336927-336946 None:intergenic 30.0%
TAACAAAAAACGAGTGACTT+GGG - chr4_2:336944-336963 Msa0582190:intron 30.0%
!!! AACGCGTTTTGTTTCTTAAT+TGG - chr4_2:336993-337012 Msa0582190:intron 30.0%
TAAAAATGTCCCACATTGAA+GGG + chr4_2:337260-337279 None:intergenic 30.0%
TTAAAAATGTCCCACATTGA+AGG + chr4_2:337261-337280 None:intergenic 30.0%
CTATGAAAAAACTAGTGTGT+GGG + chr4_2:337290-337309 None:intergenic 30.0%
ACTATGAAAAAACTAGTGTG+TGG + chr4_2:337291-337310 None:intergenic 30.0%
!!! AAACCATTTTGAAGTCAAGT+GGG + chr4_2:337365-337384 None:intergenic 30.0%
ATCTATACTCTATGTTGAGT+GGG + chr4_2:337704-337723 None:intergenic 30.0%
! TTAGAGAGTGTATCTCTAAA+TGG + chr4_2:338007-338026 None:intergenic 30.0%
AATATGCGATTGCAAGTTTA+CGG - chr4_2:338590-338609 Msa0582190:intron 30.0%
TAAAATAAACTCCTGAGGAA+TGG + chr4_2:338906-338925 None:intergenic 30.0%
!! CTTCTAGTTCACCATAAAAA+AGG - chr4_2:339013-339032 Msa0582190:five_prime_UTR 30.0%
!!! TGTGAAAGTTGCCTTTTTTA+TGG + chr4_2:339027-339046 None:intergenic 30.0%
! ATGGATATGATTTTCGTGAT+TGG - chr4_2:339101-339120 Msa0582190:intron 30.0%
AAAAAGGAACTAAAACCTGA+TGG + chr4_2:339210-339229 None:intergenic 30.0%
CAAAACCAATCGGTTATATT+TGG + chr4_2:339240-339259 None:intergenic 30.0%
! ATTGCTAAAGAGTATGAACT+TGG + chr4_2:339407-339426 None:intergenic 30.0%
CTTTAACTAAAGAATAGTGG+GGG + chr4_2:339602-339621 None:intergenic 30.0%
CCTTTAACTAAAGAATAGTG+GGG + chr4_2:339603-339622 None:intergenic 30.0%
CCCTTTAACTAAAGAATAGT+GGG + chr4_2:339604-339623 None:intergenic 30.0%
CCCACTATTCTTTAGTTAAA+GGG - chr4_2:339601-339620 Msa0582190:intron 30.0%
CCACTATTCTTTAGTTAAAG+GGG - chr4_2:339602-339621 Msa0582190:intron 30.0%
TCTGGACTATATTAAGATCA+TGG + chr4_2:339774-339793 None:intergenic 30.0%
!!! CTTGTCTTATTTTTCGAACT+TGG + chr4_2:339802-339821 None:intergenic 30.0%
GTTCGAAAAATAAGACAAGT+TGG - chr4_2:339803-339822 Msa0582190:intron 30.0%
! TTATTGATGACTGTGAACTT+TGG + chr4_2:339946-339965 None:intergenic 30.0%
AATCACCCAACTTATATAGA+AGG - chr4_2:340203-340222 Msa0582190:intron 30.0%
AGACAAATATTTAGCGTAAC+AGG + chr4_2:340612-340631 None:intergenic 30.0%
AAGGATCAAGTGGAAAATTA+AGG - chr4_2:340644-340663 Msa0582190:intron 30.0%
TGAAATTCACATATGTGACT+TGG + chr4_2:340766-340785 None:intergenic 30.0%
AGTTGTCCCTAAATACATTA+AGG + chr4_2:340860-340879 None:intergenic 30.0%
AGAATTACACCCTCAAAATA+TGG - chr4_2:336500-336519 Msa0582190:CDS 30.0%
CGAAACCGTTCAAATTAATA+TGG - chr4_2:336572-336591 Msa0582190:CDS 30.0%
! TTTCGGTGTAAAGAATCAAA+TGG - chr4_2:336891-336910 Msa0582190:intron 30.0%
! TTCGGTGTAAAGAATCAAAT+GGG - chr4_2:336892-336911 Msa0582190:intron 30.0%
TTACAAACTCTCCCTATAAA+AGG + chr4_2:336927-336946 None:intergenic 30.0%
TAACAAAAAACGAGTGACTT+GGG - chr4_2:336944-336963 Msa0582190:intron 30.0%
!!! AACGCGTTTTGTTTCTTAAT+TGG - chr4_2:336993-337012 Msa0582190:intron 30.0%
TAAAAATGTCCCACATTGAA+GGG + chr4_2:337260-337279 None:intergenic 30.0%
TTAAAAATGTCCCACATTGA+AGG + chr4_2:337261-337280 None:intergenic 30.0%
CTATGAAAAAACTAGTGTGT+GGG + chr4_2:337290-337309 None:intergenic 30.0%
ACTATGAAAAAACTAGTGTG+TGG + chr4_2:337291-337310 None:intergenic 30.0%
CTAATATATGATGTTGGTGT+AGG + chr4_2:342062-342081 None:intergenic 30.0%
AGGGAACTAATATATGATGT+TGG + chr4_2:342068-342087 None:intergenic 30.0%
! GAGATTTAAGGATAGCTTTT+AGG + chr4_2:342088-342107 None:intergenic 30.0%
ACAAAAGGAGTTCATTAGTT+TGG - chr4_2:342495-342514 Msa0582190:intron 30.0%
GTTTGGAGAATTGTATTCAA+TGG - chr4_2:342512-342531 Msa0582190:intron 30.0%
AAAATGACGAAACAATTGAC+AGG - chr4_2:342591-342610 Msa0582190:intron 30.0%
AAATGACGAAACAATTGACA+GGG - chr4_2:342592-342611 Msa0582190:intron 30.0%
ATATTTGCAAAGCAGAATCA+AGG - chr4_2:342714-342733 Msa0582190:intron 30.0%
TGAGTATGGTTATGTTGATA+TGG - chr4_2:342764-342783 Msa0582190:intron 30.0%
ATGGTTATGTTGATATGGTT+AGG - chr4_2:342769-342788 Msa0582190:intron 30.0%
TGGTTATGTTGATATGGTTA+GGG - chr4_2:342770-342789 Msa0582190:intron 30.0%
TTCATATTGCTGCTAAACAA+GGG - chr4_2:342856-342875 Msa0582190:intron 30.0%
! TGTTCTTTGTGTTTTGTGAA+AGG - chr4_2:342919-342938 Msa0582190:intron 30.0%
AAAAGTCTATGACTGCAATT+TGG + chr4_2:343086-343105 None:intergenic 30.0%
GTGTCATAAAAATCTACTCA+AGG + chr4_2:343119-343138 None:intergenic 30.0%
GAAAATAACACACATCACAA+AGG + chr4_2:343160-343179 None:intergenic 30.0%
CAACTCGTGTTTAATTACTA+CGG + chr4_2:343268-343287 None:intergenic 30.0%
AACAAGATTTGATCAGAGTT+CGG + chr4_2:343344-343363 None:intergenic 30.0%
AGATATCGTAAAGATCCTAA+TGG - chr4_2:343426-343445 Msa0582190:intron 30.0%
GTGAAATATCTATTAGAAGC+AGG - chr4_2:343535-343554 Msa0582190:intron 30.0%
TGTTACAAGGACTGATAAAA+AGG - chr4_2:343669-343688 Msa0582190:intron 30.0%
GTTACAAGGACTGATAAAAA+GGG - chr4_2:343670-343689 Msa0582190:intron 30.0%
AGATCCATCAACAATAAACA+TGG - chr4_2:343759-343778 Msa0582190:intron 30.0%
TCAACCATGTTTATTGTTGA+TGG + chr4_2:343766-343785 None:intergenic 30.0%
AACTCAGGTAAATTTGACTA+TGG - chr4_2:343831-343850 Msa0582190:intron 30.0%
AAGATAGTGTTTACAAGAAG+TGG - chr4_2:343900-343919 Msa0582190:intron 30.0%
TCTTTATTCAAAGTGTGACT+TGG - chr4_2:344043-344062 Msa0582190:intron 30.0%
CTTTATTCAAAGTGTGACTT+GGG - chr4_2:344044-344063 Msa0582190:intron 30.0%
TAGTAGCTATGAAGTACAAA+TGG + chr4_2:344442-344461 None:intergenic 30.0%
AAGATCTGTGATAATTCTTG+GGG - chr4_2:344513-344532 Msa0582190:intron 30.0%
GAATATCATATCATGCTCTA+TGG + chr4_2:344573-344592 None:intergenic 30.0%
!! CAGATTATCAAGTTGATACT+TGG - chr4_2:344690-344709 Msa0582190:intron 30.0%
!! AAAAGCATTCTTACAGAACA+CGG - chr4_2:344798-344817 Msa0582190:intron 30.0%
GATCCAAAAAAAGTTCCTAA+AGG - chr4_2:345089-345108 Msa0582190:intron 30.0%
AGTATTCATCGTGTTTGATT+CGG - chr4_2:345157-345176 Msa0582190:intron 30.0%
!!! GCTTATATCTGTGTCATTTT+TGG - chr4_2:345298-345317 Msa0582190:intron 30.0%
!!! GCTTTGTCTTTTTTAGTTGT+GGG - chr4_2:345320-345339 Msa0582190:intron 30.0%
!!! CTTTGTCTTTTTTAGTTGTG+GGG - chr4_2:345321-345340 Msa0582190:intron 30.0%
CAATTGGGGTAACTATTATT+GGG - chr4_2:345363-345382 Msa0582190:intron 30.0%
TATTATTGGGACTACCATAA+TGG - chr4_2:345376-345395 Msa0582190:intron 30.0%
ATTGGGTACTATGAGTTATT+GGG - chr4_2:345406-345425 Msa0582190:five_prime_UTR 30.0%
CTATGAGTTATTGGGTTATT+AGG - chr4_2:345414-345433 Msa0582190:five_prime_UTR 30.0%
TTAGGCATAGAATCAATTTG+AGG - chr4_2:345432-345451 Msa0582190:five_prime_UTR 30.0%
CTTCGGTAGATGATAGAATT+TGG + chr4_2:336320-336339 None:intergenic 35.0%
ACTCAACCTAGTAACAACTT+CGG + chr4_2:336337-336356 None:intergenic 35.0%
! AGTCTACCTTGCACAATTTT+GGG + chr4_2:336400-336419 None:intergenic 35.0%
! TAGTCTACCTTGCACAATTT+TGG + chr4_2:336401-336420 None:intergenic 35.0%
TTAATCGAACAGTTGTAGCT+GGG + chr4_2:336454-336473 None:intergenic 35.0%
!! ACGATTGAGCCATATTTTGA+GGG + chr4_2:336512-336531 None:intergenic 35.0%
! AACGATTGAGCCATATTTTG+AGG + chr4_2:336513-336532 None:intergenic 35.0%
GACTATGAACTTAAGACCAA+GGG - chr4_2:336745-336764 Msa0582190:CDS 35.0%
AAGAACACTCTTAATACCGA+AGG - chr4_2:336779-336798 Msa0582190:CDS 35.0%
AGAACACTCTTAATACCGAA+GGG - chr4_2:336780-336799 Msa0582190:CDS 35.0%
! ACTTGTTAAAAACAAGTCGG+AGG - chr4_2:336828-336847 Msa0582190:intron 35.0%
CTTGTTAAAAACAAGTCGGA+GGG - chr4_2:336829-336848 Msa0582190:intron 35.0%
!!! AAGCATCGACTGTGAATTTT+CGG - chr4_2:336874-336893 Msa0582190:intron 35.0%
TCGGTGTAAAGAATCAAATG+GGG - chr4_2:336893-336912 Msa0582190:intron 35.0%
GTAACAAAAAACGAGTGACT+TGG - chr4_2:336943-336962 Msa0582190:intron 35.0%
AACAAAAAACGAGTGACTTG+GGG - chr4_2:336945-336964 Msa0582190:intron 35.0%
AAACAAAACGCGTTTGCTTA+AGG + chr4_2:336987-337006 None:intergenic 35.0%
AAAGCATATCCAGAAACTTC+CGG + chr4_2:337025-337044 None:intergenic 35.0%
!! GAAGTTTCTGGATATGCTTT+TGG - chr4_2:337025-337044 Msa0582190:intron 35.0%
! TTCTGGATATGCTTTTGGAT+CGG - chr4_2:337030-337049 Msa0582190:intron 35.0%
!!! AACCATTTTGAAGTCAAGTG+GGG + chr4_2:337364-337383 None:intergenic 35.0%
!!! GAAACCATTTTGAAGTCAAG+TGG + chr4_2:337366-337385 None:intergenic 35.0%
!! TATGCTAAGGTTCAAGTTGT+TGG + chr4_2:337441-337460 None:intergenic 35.0%
GAATATCTTCCACTATGCTA+AGG + chr4_2:337454-337473 None:intergenic 35.0%
CTTATGAAAAGGTTTGTGTG+TGG + chr4_2:337528-337547 None:intergenic 35.0%
! CTAGAGCATTCATTAAAACC+GGG + chr4_2:337594-337613 None:intergenic 35.0%
! CCTAGAGCATTCATTAAAAC+CGG + chr4_2:337595-337614 None:intergenic 35.0%
TCTATACTCTATGTTGAGTG+GGG + chr4_2:337703-337722 None:intergenic 35.0%
GATCTATACTCTATGTTGAG+TGG + chr4_2:337705-337724 None:intergenic 35.0%
GGTAAAAACAAGTCATGAAG+TGG + chr4_2:337809-337828 None:intergenic 35.0%
! TACCCATTGAACCTATTTCT+TGG - chr4_2:337825-337844 Msa0582190:CDS 35.0%
! ACCCATTGAACCTATTTCTT+GGG - chr4_2:337826-337845 Msa0582190:CDS 35.0%
TCCCAAGAAATAGGTTCAAT+GGG + chr4_2:337830-337849 None:intergenic 35.0%
ATCCCAAGAAATAGGTTCAA+TGG + chr4_2:337831-337850 None:intergenic 35.0%
CTATTAAGTCCTTTCGTCAA+AGG - chr4_2:337935-337954 Msa0582190:CDS 35.0%
ATCTCAGATTCATTCCATAG+TGG - chr4_2:338212-338231 Msa0582190:intron 35.0%
!! GACTCTAAGATTACTTCACT+AGG + chr4_2:338369-338388 None:intergenic 35.0%
ATGCTATAGAATGAGTCATG+AGG + chr4_2:338409-338428 None:intergenic 35.0%
TCATGACTCATTCTATAGCA+TGG - chr4_2:338408-338427 Msa0582190:intron 35.0%
AAGTTTACTAGTAGACGGAT+GGG + chr4_2:338442-338461 None:intergenic 35.0%
TGTGCAAGTTTACTAGTAGA+CGG + chr4_2:338447-338466 None:intergenic 35.0%
ACAGAATATACGAGCATCAT+TGG + chr4_2:338530-338549 None:intergenic 35.0%
AAGTGTAAGAACACTTGAGA+TGG + chr4_2:338563-338582 None:intergenic 35.0%
ATCTCAAGTGTTCTTACACT+TGG - chr4_2:338562-338581 Msa0582190:intron 35.0%
! AATTTTTCATGCCATTCCTC+AGG - chr4_2:338892-338911 Msa0582190:CDS 35.0%
! TGGTCTAAAATAAACTCCTG+AGG + chr4_2:338911-338930 None:intergenic 35.0%
TAACTCGATAGTACTCCAAA+TGG + chr4_2:339051-339070 None:intergenic 35.0%
GAGTACTATCGAGTTATGAA+CGG - chr4_2:339055-339074 Msa0582190:five_prime_UTR 35.0%
! TAAAGGGACTAGTACTCTTA+TGG - chr4_2:339082-339101 Msa0582190:intron 35.0%
! GTCTAAAACCTTTGACTACA+AGG - chr4_2:339160-339179 Msa0582190:intron 35.0%
CTCATAGTTGCAAAACCAAT+CGG + chr4_2:339250-339269 None:intergenic 35.0%
GTCTAACAAAACATGACACT+TGG + chr4_2:339282-339301 None:intergenic 35.0%
CAAGATGTTATAGAACCTCA+AGG + chr4_2:339446-339465 None:intergenic 35.0%
CCCCACTATTCTTTAGTTAA+AGG - chr4_2:339600-339619 Msa0582190:intron 35.0%
CCCCTTTAACTAAAGAATAG+TGG + chr4_2:339605-339624 None:intergenic 35.0%
CCTATGAATGTGTATTCATC+GGG + chr4_2:339721-339740 None:intergenic 35.0%
GCCTATGAATGTGTATTCAT+CGG + chr4_2:339722-339741 None:intergenic 35.0%
! TCTTTTCCCACAAAAAAGCA+TGG - chr4_2:340261-340280 Msa0582190:intron 35.0%
!!! TGTACACCATGCTTTTTTGT+GGG + chr4_2:340270-340289 None:intergenic 35.0%
!!! TTGTACACCATGCTTTTTTG+TGG + chr4_2:340271-340290 None:intergenic 35.0%
! CTCGGGTACTCAATTATTTT+AGG + chr4_2:340325-340344 None:intergenic 35.0%
TGATATCCGTCTACCAAAAT+TGG - chr4_2:340346-340365 Msa0582190:intron 35.0%
!! CTATATTGGAGCACCAATTT+TGG + chr4_2:340362-340381 None:intergenic 35.0%
CCCAAAAAATTGCTTCAGTA+CGG + chr4_2:340453-340472 None:intergenic 35.0%
!!! CCGTACTGAAGCAATTTTTT+GGG - chr4_2:340450-340469 Msa0582190:intron 35.0%
!!! AAGCAATTTTTTGGGAGAGT+AGG - chr4_2:340458-340477 Msa0582190:intron 35.0%
TTCAATTGTCAAGGATCAAG+TGG - chr4_2:340634-340653 Msa0582190:intron 35.0%
CTTCGGTAGATGATAGAATT+TGG + chr4_2:336320-336339 None:intergenic 35.0%
ACTCAACCTAGTAACAACTT+CGG + chr4_2:336337-336356 None:intergenic 35.0%
! AGTCTACCTTGCACAATTTT+GGG + chr4_2:336400-336419 None:intergenic 35.0%
! TAGTCTACCTTGCACAATTT+TGG + chr4_2:336401-336420 None:intergenic 35.0%
!! ACGATTGAGCCATATTTTGA+GGG + chr4_2:336512-336531 None:intergenic 35.0%
! AACGATTGAGCCATATTTTG+AGG + chr4_2:336513-336532 None:intergenic 35.0%
GACTATGAACTTAAGACCAA+GGG - chr4_2:336745-336764 Msa0582190:CDS 35.0%
AAGAACACTCTTAATACCGA+AGG - chr4_2:336779-336798 Msa0582190:CDS 35.0%
AGAACACTCTTAATACCGAA+GGG - chr4_2:336780-336799 Msa0582190:CDS 35.0%
! ACTTGTTAAAAACAAGTCGG+AGG - chr4_2:336828-336847 Msa0582190:intron 35.0%
CTTGTTAAAAACAAGTCGGA+GGG - chr4_2:336829-336848 Msa0582190:intron 35.0%
!!! AAGCATCGACTGTGAATTTT+CGG - chr4_2:336874-336893 Msa0582190:intron 35.0%
TCGGTGTAAAGAATCAAATG+GGG - chr4_2:336893-336912 Msa0582190:intron 35.0%
GTAACAAAAAACGAGTGACT+TGG - chr4_2:336943-336962 Msa0582190:intron 35.0%
AACAAAAAACGAGTGACTTG+GGG - chr4_2:336945-336964 Msa0582190:intron 35.0%
AAACAAAACGCGTTTGCTTA+AGG + chr4_2:336987-337006 None:intergenic 35.0%
AAAGCATATCCAGAAACTTC+CGG + chr4_2:337025-337044 None:intergenic 35.0%
!! GAAGTTTCTGGATATGCTTT+TGG - chr4_2:337025-337044 Msa0582190:intron 35.0%
! TTCTGGATATGCTTTTGGAT+CGG - chr4_2:337030-337049 Msa0582190:intron 35.0%
TTTAGTGGAACACACAAGTA+AGG - chr4_2:342117-342136 Msa0582190:intron 35.0%
!! AGAGCAATGATTTTGGAGAA+AGG - chr4_2:342270-342289 Msa0582190:intron 35.0%
! TCTTTGAAGGATACAGTTGA+TGG - chr4_2:342666-342685 Msa0582190:intron 35.0%
TATTATGATCTTGCTGATGC+TGG - chr4_2:342804-342823 Msa0582190:intron 35.0%
GCTGGAATTAAAGCAAGAAA+TGG - chr4_2:342822-342841 Msa0582190:intron 35.0%
CTTCATATTGCTGCTAAACA+AGG - chr4_2:342855-342874 Msa0582190:intron 35.0%
TCATATTGCTGCTAAACAAG+GGG - chr4_2:342857-342876 Msa0582190:intron 35.0%
ACAAGGGGATTTAGGTATTA+TGG - chr4_2:342872-342891 Msa0582190:intron 35.0%
TTTGTGAAAGGAGTAATGAG+TGG - chr4_2:342931-342950 Msa0582190:intron 35.0%
TGTCTTCGCAATCATAATTG+AGG + chr4_2:343041-343060 None:intergenic 35.0%
TGATTTACTGACAAGTAGAC+AGG - chr4_2:343219-343238 Msa0582190:intron 35.0%
TTACTACGGTTCAGTTTACA+AGG + chr4_2:343254-343273 None:intergenic 35.0%
ATTCAGAATGAGCTTCCATT+AGG + chr4_2:343444-343463 None:intergenic 35.0%
TTCTGAATTGTCAATGACTG+TGG - chr4_2:343456-343475 Msa0582190:intron 35.0%
GCAACAATTGCTAGAAGTAA+TGG - chr4_2:343568-343587 Msa0582190:intron 35.0%
TTAACTCAATCCTACAAACC+CGG - chr4_2:343990-344009 Msa0582190:intron 35.0%
GTATGTTTACGGGGTATAAA+GGG + chr4_2:344071-344090 None:intergenic 35.0%
CCAAAATTGGTATGTTTACG+GGG + chr4_2:344080-344099 None:intergenic 35.0%
CCCAAAATTGGTATGTTTAC+GGG + chr4_2:344081-344100 None:intergenic 35.0%
! CCCGTAAACATACCAATTTT+GGG - chr4_2:344078-344097 Msa0582190:intron 35.0%
CCCCAAAATTGGTATGTTTA+CGG + chr4_2:344082-344101 None:intergenic 35.0%
! CCGTAAACATACCAATTTTG+GGG - chr4_2:344079-344098 Msa0582190:intron 35.0%
!!! AAACATACCAATTTTGGGGT+TGG - chr4_2:344083-344102 Msa0582190:intron 35.0%
TACGTGGATATTCTGTTAGA+TGG - chr4_2:344106-344125 Msa0582190:intron 35.0%
ATAGTACCAAGTCTATCCAT+CGG + chr4_2:344133-344152 None:intergenic 35.0%
! CTCTTTTCAATGCAAAGACT+TGG - chr4_2:344242-344261 Msa0582190:intron 35.0%
TACCTATTTGGATTAAGTGC+TGG - chr4_2:344616-344635 Msa0582190:intron 35.0%
ATCCAGCACTTAATCCAAAT+AGG + chr4_2:344621-344640 None:intergenic 35.0%
!! GATTAAGTGCTGGATTATTC+AGG - chr4_2:344626-344645 Msa0582190:intron 35.0%
GCATTTCCAAAAGTTGAAAG+AGG + chr4_2:344671-344690 None:intergenic 35.0%
CTTGGACAAAGTGAAACAAA+TGG - chr4_2:344708-344727 Msa0582190:intron 35.0%
ACAAAGTGAAACAAATGGCA+TGG - chr4_2:344713-344732 Msa0582190:intron 35.0%
! AGCTTTCGGTTGAGATTTTA+TGG + chr4_2:344841-344860 None:intergenic 35.0%
AATTCTCTTGTTGCAGCTTT+CGG + chr4_2:344855-344874 None:intergenic 35.0%
! TTTTTGGATCGTCAACGAAT+TGG + chr4_2:345079-345098 None:intergenic 35.0%
CAAAGCAAAGAAGCAAATGA+TGG - chr4_2:345241-345260 Msa0582190:intron 35.0%
!!! GGCTTTGTCTTTTTTAGTTG+TGG - chr4_2:345319-345338 Msa0582190:intron 35.0%
TAGTTGTGGGGAAAAAACAA+AGG - chr4_2:345333-345352 Msa0582190:intron 35.0%
GCAATTGGGGTAACTATTAT+TGG - chr4_2:345362-345381 Msa0582190:intron 35.0%
TACCATAATGGCTACAACAT+TGG - chr4_2:345388-345407 Msa0582190:intron 35.0%
ACCATAATGGCTACAACATT+GGG - chr4_2:345389-345408 Msa0582190:intron 35.0%
CATTGGGTACTATGAGTTAT+TGG - chr4_2:345405-345424 Msa0582190:five_prime_UTR 35.0%
GAAAATCTTCAATGGGAAGT+AGG - chr4_2:345462-345481 Msa0582190:five_prime_UTR 35.0%
!! CACTACCTTTTGTTTCCTGT+TGG - chr4_2:336008-336027 Msa0582190:CDS 40.0%
ATGCACCAACAGGAAACAAA+AGG + chr4_2:336016-336035 None:intergenic 40.0%
GATATACATCATGCACCAAC+AGG + chr4_2:336026-336045 None:intergenic 40.0%
CATCTACCGAAGTTGTTACT+AGG - chr4_2:336328-336347 Msa0582190:CDS 40.0%
GTTAATCGAACAGTTGTAGC+TGG + chr4_2:336455-336474 None:intergenic 40.0%
TTGAACGGTTTCGAATAGAG+CGG + chr4_2:336565-336584 None:intergenic 40.0%
GTCTCAGCACCATATTAGAA+TGG + chr4_2:336606-336625 None:intergenic 40.0%
GTGGTAACACCATATTTGAG+TGG + chr4_2:336628-336647 None:intergenic 40.0%
GGACTATGAACTTAAGACCA+AGG - chr4_2:336744-336763 Msa0582190:CDS 40.0%
AACTTAAGACCAAGGGACTA+TGG - chr4_2:336752-336771 Msa0582190:CDS 40.0%
TTCTTAAGACCATAGTCCCT+TGG + chr4_2:336764-336783 None:intergenic 40.0%
TTAATACCGAAGGGACAGAA+AGG - chr4_2:336789-336808 Msa0582190:CDS 40.0%
GAGAAGAGAGGAAAAAACAC+AGG - chr4_2:336851-336870 Msa0582190:intron 40.0%
TGGATATATCCGGAAGTTTC+TGG - chr4_2:337013-337032 Msa0582190:intron 40.0%
! TCTGGATATGCTTTTGGATC+GGG - chr4_2:337031-337050 Msa0582190:intron 40.0%
GTTCACCCGTTCACAAAATT+GGG - chr4_2:337170-337189 Msa0582190:intron 40.0%
!!! ACCATTTTGAAGTCAAGTGG+GGG + chr4_2:337363-337382 None:intergenic 40.0%
CAACTTGAACCTTAGCATAG+TGG - chr4_2:337442-337461 Msa0582190:intron 40.0%
!! CCGGTTTTAATGAATGCTCT+AGG - chr4_2:337592-337611 Msa0582190:intron 40.0%
ATTCTGCCTCGAAATTCCAT+AGG - chr4_2:337616-337635 Msa0582190:intron 40.0%
CCTATACGAATGTGGAACTT+AGG + chr4_2:337647-337666 None:intergenic 40.0%
CCTAAGTTCCACATTCGTAT+AGG - chr4_2:337644-337663 Msa0582190:intron 40.0%
TAGACTCACCTATACGAATG+TGG + chr4_2:337655-337674 None:intergenic 40.0%
TCGTATAGGTGAGTCTATCA+AGG - chr4_2:337658-337677 Msa0582190:intron 40.0%
CGTATAGGTGAGTCTATCAA+GGG - chr4_2:337659-337678 Msa0582190:intron 40.0%
TACCATCACTTGTGGGATAT+AGG - chr4_2:337872-337891 Msa0582190:CDS 40.0%
CAAGAAACATCCAGTAGGAT+GGG + chr4_2:337905-337924 None:intergenic 40.0%
AAGTCCAAGAAACATCCAGT+AGG + chr4_2:337910-337929 None:intergenic 40.0%
TTAGCTGATCCTTTGACGAA+AGG + chr4_2:337947-337966 None:intergenic 40.0%
GAGTGTATCTCTAAATGGAG+CGG + chr4_2:338002-338021 None:intergenic 40.0%
ATGGTAAGAGACGACAGATA+AGG + chr4_2:338046-338065 None:intergenic 40.0%
CTTAATCTTTGCAATAGCCG+CGG - chr4_2:338079-338098 Msa0582190:CDS 40.0%
AATTCATTGCGATAGTACCG+CGG + chr4_2:338099-338118 None:intergenic 40.0%
TCGCAATGAATTAACACAGC+TGG - chr4_2:338107-338126 Msa0582190:intron 40.0%
TGAATTAACACAGCTGGCAA+CGG - chr4_2:338113-338132 Msa0582190:intron 40.0%
GCAACGGTTTATCCCATAAA+GGG - chr4_2:338129-338148 Msa0582190:intron 40.0%
GCTAGCTGAAATCCCTTTAT+GGG + chr4_2:338144-338163 None:intergenic 40.0%
TGCTAGCTGAAATCCCTTTA+TGG + chr4_2:338145-338164 None:intergenic 40.0%
!! GATATTGACTCAGTCCACTA+TGG + chr4_2:338229-338248 None:intergenic 40.0%
CAAGTTTACTAGTAGACGGA+TGG + chr4_2:338443-338462 None:intergenic 40.0%
TTTCACGACATCGACAATGT+CGG - chr4_2:338471-338490 Msa0582190:intron 40.0%
GTCGGATCTAATACATTCAG+TGG - chr4_2:338489-338508 Msa0582190:intron 40.0%
! CCTGAAAGTTTTGCGATTCA+TGG + chr4_2:338973-338992 None:intergenic 40.0%
CCATGAATCGCAAAACTTTC+AGG - chr4_2:338970-338989 Msa0582190:CDS 40.0%
AGGCAACTTTCACATCCATT+TGG - chr4_2:339033-339052 Msa0582190:five_prime_UTR 40.0%
TACTATCGAGTTATGAACGG+CGG - chr4_2:339058-339077 Msa0582190:five_prime_UTR 40.0%
!! TGGAACGGTTGATGAATACA+AGG + chr4_2:339190-339209 None:intergenic 40.0%
TATTCATCAACCGTTCCATC+AGG - chr4_2:339192-339211 Msa0582190:intron 40.0%
GGAACTAAAACCTGATGGAA+CGG + chr4_2:339205-339224 None:intergenic 40.0%
CCTCATTGGATGCTGAATTA+TGG + chr4_2:339339-339358 None:intergenic 40.0%
CCATAATTCAGCATCCAATG+AGG - chr4_2:339336-339355 Msa0582190:intron 40.0%
! TTAGCTTTCTTACCTCCTTG+AGG - chr4_2:339428-339447 Msa0582190:five_prime_UTR 40.0%
GATGTTATAGAACCTCAAGG+AGG + chr4_2:339443-339462 None:intergenic 40.0%
CCCGATGAATACACATTCAT+AGG - chr4_2:339718-339737 Msa0582190:intron 40.0%
ACTAGTGAGTTCAACTCTCT+TGG - chr4_2:339745-339764 Msa0582190:intron 40.0%
CTAGTGAGTTCAACTCTCTT+GGG - chr4_2:339746-339765 Msa0582190:intron 40.0%
TAGTGAGTTCAACTCTCTTG+GGG - chr4_2:339747-339766 Msa0582190:intron 40.0%
! TTTTCGAACTTGGGATTGTC+TGG + chr4_2:339792-339811 None:intergenic 40.0%
TTGGTAGACGGATATCAACT+CGG + chr4_2:340343-340362 None:intergenic 40.0%
TGAGCTAACCAATACACCTT+TGG + chr4_2:340426-340445 None:intergenic 40.0%
!!! GCCGTACTGAAGCAATTTTT+TGG - chr4_2:340449-340468 Msa0582190:intron 40.0%
CGGTGCAGTAACAAATGAAA+AGG + chr4_2:340538-340557 None:intergenic 40.0%
TATTTAGCGTAACAGGCATC+TGG + chr4_2:340605-340624 None:intergenic 40.0%
CATCTACCGAAGTTGTTACT+AGG - chr4_2:336328-336347 Msa0582190:CDS 40.0%
TTGAACGGTTTCGAATAGAG+CGG + chr4_2:336565-336584 None:intergenic 40.0%
GTCTCAGCACCATATTAGAA+TGG + chr4_2:336606-336625 None:intergenic 40.0%
GTGGTAACACCATATTTGAG+TGG + chr4_2:336628-336647 None:intergenic 40.0%
GGACTATGAACTTAAGACCA+AGG - chr4_2:336744-336763 Msa0582190:CDS 40.0%
AACTTAAGACCAAGGGACTA+TGG - chr4_2:336752-336771 Msa0582190:CDS 40.0%
TTCTTAAGACCATAGTCCCT+TGG + chr4_2:336764-336783 None:intergenic 40.0%
TTAATACCGAAGGGACAGAA+AGG - chr4_2:336789-336808 Msa0582190:CDS 40.0%
GAGAAGAGAGGAAAAAACAC+AGG - chr4_2:336851-336870 Msa0582190:intron 40.0%
TGGATATATCCGGAAGTTTC+TGG - chr4_2:337013-337032 Msa0582190:intron 40.0%
! TCTGGATATGCTTTTGGATC+GGG - chr4_2:337031-337050 Msa0582190:intron 40.0%
GTTCACCCGTTCACAAAATT+GGG - chr4_2:337170-337189 Msa0582190:intron 40.0%
TTTGCAAAGCAGAATCAAGG+TGG - chr4_2:342717-342736 Msa0582190:intron 40.0%
CTTTATGTTGCTGCTGAGTA+TGG - chr4_2:342750-342769 Msa0582190:intron 40.0%
AAGGCACAAAATGAGCAACT+AGG + chr4_2:343141-343160 None:intergenic 40.0%
ATTAGAAGCAGGTAGTAGCT+TGG - chr4_2:343546-343565 Msa0582190:intron 40.0%
TGGTAAAACAGCTCTGCATT+CGG - chr4_2:343588-343607 Msa0582190:intron 40.0%
TGCAAGAAATGGACATTTGG+AGG - chr4_2:343612-343631 Msa0582190:intron 40.0%
TGTGAAAGCGATTCTTGAGA+AGG - chr4_2:343636-343655 Msa0582190:intron 40.0%
GACTGATAAAAAGGGACAGA+CGG - chr4_2:343678-343697 Msa0582190:intron 40.0%
TTGCATATAGCAACCAGGAA+GGG - chr4_2:343805-343824 Msa0582190:intron 40.0%
AACTCTCACATCTCACAAAC+CGG + chr4_2:344012-344031 None:intergenic 40.0%
GGTATGTTTACGGGGTATAA+AGG + chr4_2:344072-344091 None:intergenic 40.0%
! CCCCGTAAACATACCAATTT+TGG - chr4_2:344077-344096 Msa0582190:intron 40.0%
TATTCTGTTAGATGGTCCGA+TGG - chr4_2:344114-344133 Msa0582190:intron 40.0%
AATGCAAAACATGCACACCA+TGG + chr4_2:344481-344500 None:intergenic 40.0%
TGCTGGATTATTCAGGATAG+AGG - chr4_2:344633-344652 Msa0582190:intron 40.0%
TTAGACACAGCTGAGAAAAC+AGG - chr4_2:344762-344781 Msa0582190:intron 40.0%
TTTGACGAGTGTGTTCTAGT+TGG + chr4_2:344917-344936 None:intergenic 40.0%
CTCAACAAAATGCACACAGA+AGG - chr4_2:344969-344988 Msa0582190:intron 40.0%
GTTCCTAAAGGAAAAACCCT+TGG - chr4_2:345101-345120 Msa0582190:intron 40.0%
AGCAAACATAGCTTCAGAAC+CGG - chr4_2:345127-345146 Msa0582190:intron 40.0%
ACGATGAATACTAGAAACGC+CGG + chr4_2:345149-345168 None:intergenic 40.0%
TTGTGGGGAAAAAACAAAGG+TGG - chr4_2:345336-345355 Msa0582190:intron 40.0%
! AAACAAAGGTGGCTTGCAAT+TGG - chr4_2:345347-345366 Msa0582190:intron 40.0%
! AACAAAGGTGGCTTGCAATT+GGG - chr4_2:345348-345367 Msa0582190:intron 40.0%
ACCCAATGTTGTAGCCATTA+TGG + chr4_2:345393-345412 None:intergenic 40.0%
!! GCTCTCTTTAAGACGTTTCG+TGG - chr4_2:336369-336388 Msa0582190:CDS 45.0%
GCACTACCCAAAATTGTGCA+AGG - chr4_2:336391-336410 Msa0582190:CDS 45.0%
!!! TAGCTGGGCTTGTTTTATCC+TGG + chr4_2:336439-336458 None:intergenic 45.0%
TTGATCGAAGCCACTCGATA+CGG - chr4_2:336532-336551 Msa0582190:CDS 45.0%
GTGCTGAGACCACTCAAATA+TGG - chr4_2:336616-336635 Msa0582190:CDS 45.0%
TCTACTCCTTTCTGTCCCTT+CGG + chr4_2:336798-336817 None:intergenic 45.0%
! GATATGCTTTTGGATCGGGT+CGG - chr4_2:337035-337054 Msa0582190:intron 45.0%
! ATATGCTTTTGGATCGGGTC+GGG - chr4_2:337036-337055 Msa0582190:intron 45.0%
TTTGTTACGCGTAGCGCTTA+CGG - chr4_2:337073-337092 Msa0582190:intron 45.0%
CGTTCACCCGTTCACAAAAT+TGG - chr4_2:337169-337188 Msa0582190:intron 45.0%
! GGGTACCCAATTTTGTGAAC+GGG + chr4_2:337178-337197 None:intergenic 45.0%
!! GGGGTACCCAATTTTGTGAA+CGG + chr4_2:337179-337198 None:intergenic 45.0%
TCACAAAATTGGGTACCCCA+AGG - chr4_2:337180-337199 Msa0582190:intron 45.0%
CACAAAATTGGGTACCCCAA+GGG - chr4_2:337181-337200 Msa0582190:intron 45.0%
ATGGGAAAAGTGACCTCCAA+GGG + chr4_2:337211-337230 None:intergenic 45.0%
TATGGGAAAAGTGACCTCCA+AGG + chr4_2:337212-337231 None:intergenic 45.0%
TCCCCCACTTGACTTCAAAA+TGG - chr4_2:337359-337378 Msa0582190:intron 45.0%
! CTAAAAGCCCGTGCGTTTTA+AGG - chr4_2:337554-337573 Msa0582190:intron 45.0%
GACTGGAGATCCCAAGAAAT+AGG + chr4_2:337839-337858 None:intergenic 45.0%
TGCCTATATCCCACAAGTGA+TGG + chr4_2:337877-337896 None:intergenic 45.0%
CCAAGAAACATCCAGTAGGA+TGG + chr4_2:337906-337925 None:intergenic 45.0%
CCATCCTACTGGATGTTTCT+TGG - chr4_2:337903-337922 Msa0582190:CDS 45.0%
GGCAACGGTTTATCCCATAA+AGG - chr4_2:338128-338147 Msa0582190:intron 45.0%
TGCACATTGAGCATCACTAG+AGG + chr4_2:338272-338291 None:intergenic 45.0%
AGTTATGAACGGCGGCTAAA+GGG - chr4_2:339066-339085 Msa0582190:intron 45.0%
AAGGCTCTCCTTGTAGTCAA+AGG + chr4_2:339171-339190 None:intergenic 45.0%
! AATGGGAGCACGACATTAGT+GGG + chr4_2:339563-339582 None:intergenic 45.0%
! TAATGGGAGCACGACATTAG+TGG + chr4_2:339564-339583 None:intergenic 45.0%
TCCTATAAGAACAAGGCGAG+TGG + chr4_2:340295-340314 None:intergenic 45.0%
TGGTAGACGGATATCAACTC+GGG + chr4_2:340342-340361 None:intergenic 45.0%
!! GGAGCACCAATTTTGGTAGA+CGG + chr4_2:340355-340374 None:intergenic 45.0%
GACGATGCAACAACTCTTGT+CGG - chr4_2:340666-340685 Msa0582190:intron 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG - chr4_2:336369-336388 Msa0582190:CDS 45.0%
GCACTACCCAAAATTGTGCA+AGG - chr4_2:336391-336410 Msa0582190:CDS 45.0%
!!! TAGCTGGGCTTGTTTTATCC+TGG + chr4_2:336439-336458 None:intergenic 45.0%
TTGATCGAAGCCACTCGATA+CGG - chr4_2:336532-336551 Msa0582190:CDS 45.0%
GTGCTGAGACCACTCAAATA+TGG - chr4_2:336616-336635 Msa0582190:CDS 45.0%
TCTACTCCTTTCTGTCCCTT+CGG + chr4_2:336798-336817 None:intergenic 45.0%
! GATATGCTTTTGGATCGGGT+CGG - chr4_2:337035-337054 Msa0582190:intron 45.0%
! ATATGCTTTTGGATCGGGTC+GGG - chr4_2:337036-337055 Msa0582190:intron 45.0%
TTTGTTACGCGTAGCGCTTA+CGG - chr4_2:337073-337092 Msa0582190:intron 45.0%
CGTTCACCCGTTCACAAAAT+TGG - chr4_2:337169-337188 Msa0582190:intron 45.0%
! GGGTACCCAATTTTGTGAAC+GGG + chr4_2:337178-337197 None:intergenic 45.0%
!! GGGGTACCCAATTTTGTGAA+CGG + chr4_2:337179-337198 None:intergenic 45.0%
TCACAAAATTGGGTACCCCA+AGG - chr4_2:337180-337199 Msa0582190:intron 45.0%
CACAAAATTGGGTACCCCAA+GGG - chr4_2:337181-337200 Msa0582190:intron 45.0%
ATGGGAAAAGTGACCTCCAA+GGG + chr4_2:337211-337230 None:intergenic 45.0%
TATGGGAAAAGTGACCTCCA+AGG + chr4_2:337212-337231 None:intergenic 45.0%
TTCTTCCTTTGAGCCCTTAC+TGG + chr4_2:342573-342592 None:intergenic 45.0%
CGATGATACGCCGTTACATT+CGG - chr4_2:342620-342639 Msa0582190:intron 45.0%
TGGGAACATGGCTTCTTTGA+AGG - chr4_2:342653-342672 Msa0582190:intron 45.0%
!! TACAGTTGATGGTGCTGAAG+AGG - chr4_2:342677-342696 Msa0582190:intron 45.0%
!! ACAGTTGATGGTGCTGAAGA+GGG - chr4_2:342678-342697 Msa0582190:intron 45.0%
GCTGCTAAACAAGGGGATTT+AGG - chr4_2:342864-342883 Msa0582190:intron 45.0%
TTGCCGTTGAAGTCATGTTG+CGG - chr4_2:342971-342990 Msa0582190:intron 45.0%
AGACCGCAACATGACTTCAA+CGG + chr4_2:342977-342996 None:intergenic 45.0%
TACGGTTCAGTTTACAAGGC+GGG + chr4_2:343250-343269 None:intergenic 45.0%
CTACGGTTCAGTTTACAAGG+CGG + chr4_2:343251-343270 None:intergenic 45.0%
TTGTGTTGCAGCTGTGTGTA+AGG + chr4_2:343500-343519 None:intergenic 45.0%
TTACACACAGCTGCAACACA+AGG - chr4_2:343499-343518 Msa0582190:intron 45.0%
GGCTGCAAGAAATGGACATT+TGG - chr4_2:343609-343628 Msa0582190:intron 45.0%
TCAGTCCTTGTAACAACACC+AGG + chr4_2:343664-343683 None:intergenic 45.0%
GTTGCATATAGCAACCAGGA+AGG - chr4_2:343804-343823 Msa0582190:intron 45.0%
ATCTCACAAACCGGGTTTGT+AGG + chr4_2:344003-344022 None:intergenic 45.0%
ACTCTCACATCTCACAAACC+GGG + chr4_2:344011-344030 None:intergenic 45.0%
! GGCTTTGTAGGATAATAGCG+GGG + chr4_2:344273-344292 None:intergenic 45.0%
! GGGCTTTGTAGGATAATAGC+GGG + chr4_2:344274-344293 None:intergenic 45.0%
! GGGGCTTTGTAGGATAATAG+CGG + chr4_2:344275-344294 None:intergenic 45.0%
GTCGTATCAGGTGTTTGTGT+CGG + chr4_2:344302-344321 None:intergenic 45.0%
!! CATAAGACACCAGCACTGAT+AGG - chr4_2:344365-344384 Msa0582190:intron 45.0%
CGTATGATACCTATCAGTGC+TGG + chr4_2:344377-344396 None:intergenic 45.0%
GGCATGGCAGTAAACAAAAG+TGG - chr4_2:344729-344748 Msa0582190:intron 45.0%
!! GAGTGTGTTCTAGTTGGTGA+TGG + chr4_2:344911-344930 None:intergenic 45.0%
!! CAAACACGAAGAAGCGTTCA+AGG - chr4_2:344933-344952 Msa0582190:intron 45.0%
! TCGCCAAGGGTTTTTCCTTT+AGG + chr4_2:345107-345126 None:intergenic 45.0%
AGCTATGTTTGCTTCGCCAA+GGG + chr4_2:345120-345139 None:intergenic 45.0%
AAGCTATGTTTGCTTCGCCA+AGG + chr4_2:345121-345140 None:intergenic 45.0%
! ACAAAGGTGGCTTGCAATTG+GGG - chr4_2:345349-345368 Msa0582190:intron 45.0%
CTTCAATGGGAAGTAGGTCA+AGG - chr4_2:345468-345487 Msa0582190:five_prime_UTR 45.0%
!!! TTATATTATTTTAATTAGAA+TGG + chr4_2:336650-336669 None:intergenic 5.0%
!!! TTATATTATTTTAATTAGAA+TGG + chr4_2:336650-336669 None:intergenic 5.0%
!! TGTTAATATATTAATATTAA+AGG - chr4_2:342013-342032 Msa0582190:intron 5.0%
! TACTAGGTTGAGTCACGACC+AGG - chr4_2:336344-336363 Msa0582190:CDS 50.0%
ACGTCTTAAAGAGAGCGACC+TGG + chr4_2:336365-336384 None:intergenic 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG + chr4_2:336433-336452 None:intergenic 50.0%
!!! CTGGGCTTGTTTTATCCTGG+AGG + chr4_2:336436-336455 None:intergenic 50.0%
! GGGCGAGCTCTCCTTTTATA+GGG - chr4_2:336913-336932 Msa0582190:intron 50.0%
TTGGGGTGACCCTTCAATGT+GGG - chr4_2:337248-337267 Msa0582190:intron 50.0%
GAAGTCAAGTGGGGGATTGT+TGG + chr4_2:337355-337374 None:intergenic 50.0%
AAAACCGGGATACACGTGCA+GGG + chr4_2:337580-337599 None:intergenic 50.0%
TAAAACCGGGATACACGTGC+AGG + chr4_2:337581-337600 None:intergenic 50.0%
GCCTCGAAATTCCATAGGAC+TGG - chr4_2:337621-337640 Msa0582190:intron 50.0%
GCCAGTCCTATGGAATTTCG+AGG + chr4_2:337625-337644 None:intergenic 50.0%
TGGAACTTAGGCCAGTCCTA+TGG + chr4_2:337635-337654 None:intergenic 50.0%
CATGATCCTGCAGCGAAAGA+AGG + chr4_2:337753-337772 None:intergenic 50.0%
CTTGGGATCTCCAGTCATGT+AGG - chr4_2:337843-337862 Msa0582190:CDS 50.0%
GGATCTCCAGTCATGTAGGT+CGG - chr4_2:337847-337866 Msa0582190:CDS 50.0%
GATCTCCAGTCATGTAGGTC+GGG - chr4_2:337848-337867 Msa0582190:CDS 50.0%
GTCGGGTTACCATCACTTGT+GGG - chr4_2:337865-337884 Msa0582190:CDS 50.0%
AGGCATTAGTCCCATCCTAC+TGG - chr4_2:337892-337911 Msa0582190:CDS 50.0%
GAGCATCATTGGCAGCACTT+AGG + chr4_2:338519-338538 None:intergenic 50.0%
GAGTTATGAACGGCGGCTAA+AGG - chr4_2:339065-339084 Msa0582190:intron 50.0%
! ATGGGAGCACGACATTAGTG+GGG + chr4_2:339562-339581 None:intergenic 50.0%
!! AGAATAGTGGGGGCACTAGT+GGG + chr4_2:339592-339611 None:intergenic 50.0%
!! AAGAATAGTGGGGGCACTAG+TGG + chr4_2:339593-339612 None:intergenic 50.0%
! GCCACTCGCCTTGTTCTTAT+AGG - chr4_2:340291-340310 Msa0582190:intron 50.0%
GGCACACGATGCTTCTAACA+TGG - chr4_2:340479-340498 Msa0582190:intron 50.0%
TAGCGTAACAGGCATCTGGT+CGG + chr4_2:340601-340620 None:intergenic 50.0%
! TACTAGGTTGAGTCACGACC+AGG - chr4_2:336344-336363 Msa0582190:CDS 50.0%
ACGTCTTAAAGAGAGCGACC+TGG + chr4_2:336365-336384 None:intergenic 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG + chr4_2:336433-336452 None:intergenic 50.0%
!!! CTGGGCTTGTTTTATCCTGG+AGG + chr4_2:336436-336455 None:intergenic 50.0%
! GGGCGAGCTCTCCTTTTATA+GGG - chr4_2:336913-336932 Msa0582190:intron 50.0%
TTGGGGTGACCCTTCAATGT+GGG - chr4_2:337248-337267 Msa0582190:intron 50.0%
GCTCTTGCTGCCGAATGTAA+CGG + chr4_2:342633-342652 None:intergenic 50.0%
TTACATTCGGCAGCAAGAGC+TGG - chr4_2:342633-342652 Msa0582190:intron 50.0%
TACATTCGGCAGCAAGAGCT+GGG - chr4_2:342634-342653 Msa0582190:intron 50.0%
ACTGTCAGAACAGCAAACCC+TGG + chr4_2:343395-343414 None:intergenic 50.0%
TGTTGCAGCTGTGTGTAAGG+CGG + chr4_2:343497-343516 None:intergenic 50.0%
CTGCATTCGGCTGCAAGAAA+TGG - chr4_2:343601-343620 Msa0582190:intron 50.0%
!! AGGAGCCTGGTGTTGTTACA+AGG - chr4_2:343656-343675 Msa0582190:intron 50.0%
! GCAGAGTCTTGTGGTAGTAG+AGG - chr4_2:343723-343742 Msa0582190:intron 50.0%
CAGCGTTGCATATAGCAACC+AGG - chr4_2:343800-343819 Msa0582190:intron 50.0%
AACCAGGAAGGGAAGAACTC+AGG - chr4_2:343816-343835 Msa0582190:intron 50.0%
TACCTGAGTTCTTCCCTTCC+TGG + chr4_2:343821-343840 None:intergenic 50.0%
CCACGTACCAACCCCAAAAT+TGG + chr4_2:344093-344112 None:intergenic 50.0%
!!! CCAATTTTGGGGTTGGTACG+TGG - chr4_2:344090-344109 Msa0582190:intron 50.0%
GATGGTCCGATGGATAGACT+TGG - chr4_2:344124-344143 Msa0582190:intron 50.0%
TCAGGTGTTTGTGTCGGAGT+CGG + chr4_2:344296-344315 None:intergenic 50.0%
GTCTGTGTCAACGTCGTATC+AGG + chr4_2:344314-344333 None:intergenic 50.0%
AAACTCCACAACAGTCGTCG+CGG - chr4_2:345007-345026 Msa0582190:intron 50.0%
CGAAAGCAACCGTTGCTATG+AGG + chr4_2:345034-345053 None:intergenic 50.0%
! GATCGTCAACGAATTGGCCT+GGG + chr4_2:345073-345092 None:intergenic 50.0%
CGGTTACGTACCGTATCGAG+TGG + chr4_2:336545-336564 None:intergenic 55.0%
ACAAGTCGGAGGGAGAAGAG+AGG - chr4_2:336839-336858 Msa0582190:intron 55.0%
! GGGGCGAGCTCTCCTTTTAT+AGG - chr4_2:336912-336931 Msa0582190:intron 55.0%
GTTGGGGTGACCCTTCAATG+TGG - chr4_2:337247-337266 Msa0582190:intron 55.0%
TGCAGGGCCTTAAAACGCAC+GGG + chr4_2:337564-337583 None:intergenic 55.0%
GTGCAGGGCCTTAAAACGCA+CGG + chr4_2:337565-337584 None:intergenic 55.0%
TGAGTGGGGTACACAGCTAC+AGG + chr4_2:337689-337708 None:intergenic 55.0%
CCTGCAGCGAAAGAAGGATG+AGG + chr4_2:337747-337766 None:intergenic 55.0%
CCTCATCCTTCTTTCGCTGC+AGG - chr4_2:337744-337763 Msa0582190:CDS 55.0%
GGTAACCCGACCTACATGAC+TGG + chr4_2:337856-337875 None:intergenic 55.0%
GGTCGGGTTACCATCACTTG+TGG - chr4_2:337864-337883 Msa0582190:CDS 55.0%
! TGGGAGCACGACATTAGTGG+GGG + chr4_2:339561-339580 None:intergenic 55.0%
! GCACTAGTGGGGGCTCTAAT+GGG + chr4_2:339580-339599 None:intergenic 55.0%
!! AATAGTGGGGGCACTAGTGG+GGG + chr4_2:339590-339609 None:intergenic 55.0%
!! GAATAGTGGGGGCACTAGTG+GGG + chr4_2:339591-339610 None:intergenic 55.0%
GTAACAGGCATCTGGTCGGT+AGG + chr4_2:340597-340616 None:intergenic 55.0%
CGGTTACGTACCGTATCGAG+TGG + chr4_2:336545-336564 None:intergenic 55.0%
ACAAGTCGGAGGGAGAAGAG+AGG - chr4_2:336839-336858 Msa0582190:intron 55.0%
! GGGGCGAGCTCTCCTTTTAT+AGG - chr4_2:336912-336931 Msa0582190:intron 55.0%
GTTGGGGTGACCCTTCAATG+TGG - chr4_2:337247-337266 Msa0582190:intron 55.0%
AGCTGAAACTGTGCAGCCTC+AGG - chr4_2:342542-342561 Msa0582190:intron 55.0%
CTGCACCAGTAAGGGCTCAA+AGG - chr4_2:342565-342584 Msa0582190:intron 55.0%
! TGTAAGGCGGTGGTGTTGGA+TGG + chr4_2:343484-343503 None:intergenic 55.0%
TGTGTGTAAGGCGGTGGTGT+TGG + chr4_2:343488-343507 None:intergenic 55.0%
GCGATTCTTGAGAAGGAGCC+TGG - chr4_2:343643-343662 Msa0582190:intron 55.0%
GCGCTTCACATGGCTGTGAA+GGG - chr4_2:343700-343719 Msa0582190:intron 55.0%
CGCTTCACATGGCTGTGAAG+GGG - chr4_2:343701-343720 Msa0582190:intron 55.0%
TGTGAAGGGGCAGAGTCTTG+TGG - chr4_2:343714-343733 Msa0582190:intron 55.0%
AGGTGTTTGTGTCGGAGTCG+GGG + chr4_2:344294-344313 None:intergenic 55.0%
CAGGTGTTTGTGTCGGAGTC+GGG + chr4_2:344295-344314 None:intergenic 55.0%
! GTCAACGAATTGGCCTGGGA+CGG + chr4_2:345069-345088 None:intergenic 55.0%
GGATCGTCAACGAATTGGCC+TGG + chr4_2:345074-345093 None:intergenic 55.0%
TTTCATCTCCCTCGCGGTTG+TGG - chr4_2:345187-345206 Msa0582190:intron 55.0%
TTGAACCACCACAACCGCGA+GGG + chr4_2:345198-345217 None:intergenic 55.0%
TTTGAACCACCACAACCGCG+AGG + chr4_2:345199-345218 None:intergenic 55.0%
! GTTTTATCCTGGAGGCGGCG+TGG + chr4_2:336428-336447 None:intergenic 60.0%
! ACCTCCAAGGGTGTGCCCTT+GGG + chr4_2:337199-337218 None:intergenic 60.0%
AAGGCCCTGCACGTGTATCC+CGG - chr4_2:337573-337592 Msa0582190:intron 60.0%
! GGCACTAGTGGGGGCTCTAA+TGG + chr4_2:339581-339600 None:intergenic 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG + chr4_2:336428-336447 None:intergenic 60.0%
! ACCTCCAAGGGTGTGCCCTT+GGG + chr4_2:337199-337218 None:intergenic 60.0%
AGCCTCAGGCTGCACCAGTA+AGG - chr4_2:342556-342575 Msa0582190:intron 60.0%
GCCTCAGGCTGCACCAGTAA+GGG - chr4_2:342557-342576 Msa0582190:intron 60.0%
GGCAGCAAGAGCTGGGAACA+TGG - chr4_2:342641-342660 Msa0582190:intron 60.0%
TGCAGCTGTGTGTAAGGCGG+TGG + chr4_2:343494-343513 None:intergenic 60.0%
GGCGCTTCACATGGCTGTGA+AGG - chr4_2:343699-343718 Msa0582190:intron 60.0%
! TGTCGGAGTCGGGGCTTTGT+AGG + chr4_2:344285-344304 None:intergenic 60.0%
CGTCGCGGTCCTCATAGCAA+CGG - chr4_2:345022-345041 Msa0582190:intron 60.0%
TTGGCCTGGGACGGTGAAGA+TGG + chr4_2:345060-345079 None:intergenic 60.0%
! CGCGCTTTTCATCTCCCTCG+CGG - chr4_2:345181-345200 Msa0582190:intron 60.0%
CTATCAACCACGCCGCCTCC+AGG - chr4_2:336418-336437 Msa0582190:CDS 65.0%
! GTACCCCAAGGGCACACCCT+TGG - chr4_2:337192-337211 Msa0582190:intron 65.0%
! CCTCCAAGGGTGTGCCCTTG+GGG + chr4_2:337198-337217 None:intergenic 65.0%
! GACCTCCAAGGGTGTGCCCT+TGG + chr4_2:337200-337219 None:intergenic 65.0%
CTATCAACCACGCCGCCTCC+AGG - chr4_2:336418-336437 Msa0582190:CDS 65.0%
! GTACCCCAAGGGCACACCCT+TGG - chr4_2:337192-337211 Msa0582190:intron 65.0%
! CCTCCAAGGGTGTGCCCTTG+GGG + chr4_2:337198-337217 None:intergenic 65.0%
! GACCTCCAAGGGTGTGCCCT+TGG + chr4_2:337200-337219 None:intergenic 65.0%
GCCCTTACTGGTGCAGCCTG+AGG + chr4_2:342561-342580 None:intergenic 65.0%
GGGACAGACGGCGCTTCACA+TGG - chr4_2:343690-343709 Msa0582190:intron 65.0%
GAGGACCGCGACGACTGTTG+TGG + chr4_2:345015-345034 None:intergenic 65.0%
GCAGCCATCTTCACCGTCCC+AGG - chr4_2:345053-345072 Msa0582190:intron 65.0%
CATCTCCCTCGCGGTTGTGG+TGG - chr4_2:345190-345209 Msa0582190:intron 65.0%
! CCCCAAGGGCACACCCTTGG+AGG - chr4_2:337195-337214 Msa0582190:intron 70.0%
! CCCCAAGGGCACACCCTTGG+AGG - chr4_2:337195-337214 Msa0582190:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 335916 345618 335916 ID=Msa0582190;Name=Msa0582190
chr4_2 mRNA 335916 345618 335916 ID=Msa0582190-mRNA-1;Parent=Msa0582190;Name=Msa0582190-mRNA-1;_AED=0.12;_eAED=0.12;_QI=439|1|1|1|0.4|0.33|6|53|545
chr4_2 exon 335916 336841 335916 ID=Msa0582190-mRNA-1:exon:92;Parent=Msa0582190-mRNA-1
chr4_2 exon 337697 338106 337697 ID=Msa0582190-mRNA-1:exon:91;Parent=Msa0582190-mRNA-1
chr4_2 exon 338649 339083 338649 ID=Msa0582190-mRNA-1:exon:90;Parent=Msa0582190-mRNA-1
chr4_2 exon 339215 339262 339215 ID=Msa0582190-mRNA-1:exon:89;Parent=Msa0582190-mRNA-1
chr4_2 exon 339396 339480 339396 ID=Msa0582190-mRNA-1:exon:88;Parent=Msa0582190-mRNA-1
chr4_2 exon 345393 345618 345393 ID=Msa0582190-mRNA-1:exon:87;Parent=Msa0582190-mRNA-1
chr4_2 five_prime_UTR 345393 345618 345393 ID=Msa0582190-mRNA-1:five_prime_utr;Parent=Msa0582190-mRNA-1
chr4_2 five_prime_UTR 339396 339480 339396 ID=Msa0582190-mRNA-1:five_prime_utr;Parent=Msa0582190-mRNA-1
chr4_2 five_prime_UTR 339215 339262 339215 ID=Msa0582190-mRNA-1:five_prime_utr;Parent=Msa0582190-mRNA-1
chr4_2 five_prime_UTR 339004 339083 339004 ID=Msa0582190-mRNA-1:five_prime_utr;Parent=Msa0582190-mRNA-1
chr4_2 CDS 338649 339003 338649 ID=Msa0582190-mRNA-1:cds;Parent=Msa0582190-mRNA-1
chr4_2 CDS 337697 338106 337697 ID=Msa0582190-mRNA-1:cds;Parent=Msa0582190-mRNA-1
chr4_2 CDS 335969 336841 335969 ID=Msa0582190-mRNA-1:cds;Parent=Msa0582190-mRNA-1
chr4_2 three_prime_UTR 335916 335968 335916 ID=Msa0582190-mRNA-1:three_prime_utr;Parent=Msa0582190-mRNA-1
Gene Sequence

>Msa0582190

ATGGACAAAGAAGCTGAAACTGTGCAGCCTCAGGCTGCACCAGTAAGGGCTCAAAGGAAGAAAATGACGAAACAATTGACAGGGAAGCGCGATGATACGCCGTTACATTCGGCAGCAAGAGCTGGGAACATGGCTTCTTTGAAGGATACAGTTGATGGTGCTGAAGAGGGTAAACTGCGCGAAATATTTGCAAAGCAGAATCAAGGTGGAGAAACAGCACTTTATGTTGCTGCTGAGTATGGTTATGTTGATATGGTTAGGGAGATGATTCAGTATTATGATCTTGCTGATGCTGGAATTAAAGCAAGAAATGGTTTTGATGCACTTCATATTGCTGCTAAACAAGGGGATTTAGATATCGTAAAGATCCTAATGGAAGCTCATTCTGAATTGTCAATGACTGTGGATCCATCCAACACCACCGCCTTACACACAGCTGCAACACAAGGACATACCGAGATAGTGAAATATCTATTAGAAGCAGGTAGTAGCTTGGCAACAATTGCTAGAAGTAATGGTAAAACAGCTCTGCATTCGGCTGCAAGAAATGGACATTTGGAGGTTGTGAAAGCGATTCTTGAGAAGGAGCCTGGTGTTGTTACAAGGACTGATAAAAAGGGACAGACGGCGCTTCACATGGCTGTGAAGGGGCAGAGTCTTGTGGTAGTAGAGGAGTTGATAAAAGCAGATCCATCAACAATAAACATGGTTGATAATAAGGGTAATACAGCGTTGCATATAGCAACCAGGAAGGGAAGAACTCAGATTATCAAGTTGATACTTGGACAAAGTGAAACAAATGGCATGGCAGTAAACAAAAGTGGCGAAACAGCATTAGACACAGCTGAGAAAACAGGAAATTCCGAAGTAAAAAGCATTCTTACAGAACACGGTGTTCAAAGCAGCAAATCCATAAAATCTCAACCGAAAGCTGCAACAAGAGAATTAAAACAAACAGTCAGTGACATAAAGCATGAAGTCCATCACCAACTAGAACACACTCGTCAAACACGAAGAAGCGTTCAAGGAATAGCAAAACGTCTCAACAAAATGCACACAGAAGGACTCAACAATGCGATAAACTCCACAACAGTCGTCGCGGTCCTCATAGCAACGGTTGCTTTCGCAGCCATCTTCACCGTCCCAGGCCAATTCGTTGACGATCCAAAAAAAGTTCCTAAAGGAAAAACCCTTGGCGAAGCAAACATAGCTTCAGAACCGGCGTTTCTAGTATTCATCGTGTTTGATTCGGTCGCGCTTTTCATCTCCCTCGCGGTTGTGGTGGTTCAAACATCAATAGTTGTTGTTGAAAGCAAAGCAAAGAAGCAAATGATGGCTATTATTAACAAACTAATGTGGTTAGCTTGTGTGCTTATATCTGTGTCATTTTTGGCTTTGTCTTTTTTAGTTGTGGGGAAAAAACAAAGGTGGCTTGCAATTGGGGTAACTATTATTGGGACTACCATAATGGCTACAACATTGGGTACTATGAGTTATTGGGTTATTAGGCATAGAATCAATTTGAGGAGTATAAGAAAATCTTCAATGGGAAGTAGGTCAAGGTCTTTTTCAGTTTCAGTTGTTATGTCTGATTCTGAGATATTAAACAATGAGCGTAATAAAATGTATGCTATTTAG
Protein sequence

>Msa0582190

MDKEAETVQPQAAPVRAQRKKMTKQLTGKRDDTPLHSAARAGNMASLKDTVDGAEEGKLREIFAKQNQGGETALYVAAEYGYVDMVREMIQYYDLADAGIKARNGFDALHIAAKQGDLDIVKILMEAHSELSMTVDPSNTTALHTAATQGHTEIVKYLLEAGSSLATIARSNGKTALHSAARNGHLEVVKAILEKEPGVVTRTDKKGQTALHMAVKGQSLVVVEELIKADPSTINMVDNKGNTALHIATRKGRTQIIKLILGQSETNGMAVNKSGETALDTAEKTGNSEVKSILTEHGVQSSKSIKSQPKAATRELKQTVSDIKHEVHHQLEHTRQTRRSVQGIAKRLNKMHTEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFVDDPKKVPKGKTLGEANIASEPAFLVFIVFDSVALFISLAVVVVQTSIVVVESKAKKQMMAIINKLMWLACVLISVSFLALSFLVVGKKQRWLAIGVTIIGTTIMATTLGTMSYWVIRHRINLRSIRKSSMGSRSRSFSVSVVMSDSEILNNERNKMYAI*