AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0618010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0618010 MtrunA17_Chr8g0378941 94.034 352 11 2 1 342 1 352 0.0 673
Msa0618010 MtrunA17_Chr1g0212371 33.990 203 118 5 146 335 120 319 3.86e-30 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0618010 AT4G28590.1 55.728 323 109 5 25 334 22 323 1.40e-119 348
Msa0618010 AT2G31840.1 41.436 181 89 5 164 330 152 329 8.97e-33 125
Msa0618010 AT2G31840.2 41.436 181 89 5 164 330 152 329 8.97e-33 125

Find 94 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTAACTACTTACTATAAT+TGG 0.049381 4_2:-68726348 None:intergenic
GAGGACATTCTCGAACTTTC+AGG 0.153863 4_2:-68728316 None:intergenic
GTTTCTATCATCCTTATTAA+TGG 0.262268 4_2:-68726657 None:intergenic
ATTAACTACTTACTATAATT+GGG 0.280895 4_2:-68726347 None:intergenic
AAGGGGAGACTGAGGATAAC+TGG 0.300402 4_2:+68727077 Msa0618010:CDS
CGACCGCGCCTTGGCTTCCT+TGG 0.304224 4_2:-68726707 None:intergenic
CTATCATCATTGCTGCGTTT+TGG 0.305949 4_2:-68726875 None:intergenic
AAATGGTGTGACCATTAATA+AGG 0.318908 4_2:+68726646 Msa0618010:CDS
TCAATTTCTATTCAACAAAA+TGG 0.319152 4_2:+68726439 Msa0618010:exon
AAGAATCTCGAATGAGAAAA+AGG 0.321782 4_2:-68726500 None:intergenic
TGTAGGATTAGGTTCGGGTT+CGG 0.333557 4_2:-68726606 None:intergenic
GTAGGATTAGGTTCGGGTTC+GGG 0.335867 4_2:-68726605 None:intergenic
GGCTTCCTTGGAATTGTTGT+TGG 0.353522 4_2:-68726695 None:intergenic
TGAATAGAAATTGAAAACTA+TGG 0.357982 4_2:-68726430 None:intergenic
GCAACAAAATGCGGGTGCTT+TGG 0.363915 4_2:+68726799 Msa0618010:CDS
TCCACAGGGCAAATGATAAC+TGG 0.371102 4_2:+68727926 Msa0618010:intron
TTTGGATGTAGGATTAGGTT+CGG 0.375242 4_2:-68726612 None:intergenic
ATAGAACATGATATTGATAT+AGG 0.406058 4_2:-68726560 None:intergenic
GGTGCAGGAGATCAATTGTT+TGG 0.409092 4_2:+68727099 Msa0618010:CDS
AGAGCTGGAGAAAGCAATAA+AGG 0.432889 4_2:+68727960 Msa0618010:CDS
TGGAGAGAAGGCGGTGATTG+AGG 0.436030 4_2:+68726934 Msa0618010:CDS
TCTCCTACTACATTCTTAAT+CGG 0.436541 4_2:-68727031 None:intergenic
TTGGAGGCATAAGAGCTGTT+TGG 0.439142 4_2:-68726469 None:intergenic
GCCTGCATGGATTGATGATA+AGG 0.442007 4_2:+68728585 Msa0618010:CDS
TAGAAATTGAAAACTATGGT+TGG 0.446812 4_2:-68726426 None:intergenic
GGAAGATGGTGGTGGAGAGA+AGG 0.455976 4_2:+68726922 Msa0618010:CDS
CCTCGTAGAAACAAAATTTG+AGG 0.457143 4_2:-68728335 None:intergenic
AGGACATTCTCGAACTTTCA+GGG 0.462386 4_2:-68728315 None:intergenic
ATGATGGTGCTGAAATTGAT+TGG 0.468138 4_2:+68727053 Msa0618010:CDS
AGAAAGCAATAAAGGTGTAC+TGG 0.471230 4_2:+68727968 Msa0618010:CDS
AAGATGGTGTACAGGGAGAA+AGG 0.474258 4_2:+68728362 Msa0618010:CDS
TGAGGAGGAGGTGGAAGAAG+AGG 0.474972 4_2:+68726901 Msa0618010:CDS
AGAACACGTTTGCTGCAATT+CGG 0.476704 4_2:+68726777 Msa0618010:CDS
AGAAATTGAAAACTATGGTT+GGG 0.477543 4_2:-68726425 None:intergenic
AGAGAGTGAGAGCTGGCCAT+TGG 0.480727 4_2:+68726958 Msa0618010:CDS
CATCCGATTAAGAATGTAGT+AGG 0.483008 4_2:+68727028 Msa0618010:CDS
AATGTGATGAGTAGATAAAG+TGG 0.489173 4_2:-68726531 None:intergenic
CTAAAGATCGGTTACCTCCC+AGG 0.492013 4_2:+68727995 Msa0618010:CDS
TTGGATGTAGGATTAGGTTC+GGG 0.492104 4_2:-68726611 None:intergenic
GAGGGAATAAGATGGTGTAC+AGG 0.495962 4_2:+68728354 Msa0618010:CDS
CATTGGATACGGATGTCGGG+TGG 0.496433 4_2:+68726975 Msa0618010:CDS
ACTCAGAACTGCGGATGAGC+TGG 0.496745 4_2:+68728525 Msa0618010:CDS
GAAGAAGAGGAAGATGGTGG+TGG 0.502013 4_2:+68726914 Msa0618010:CDS
TGATGGTGCTGAAATTGATT+GGG 0.506693 4_2:+68727054 Msa0618010:CDS
GCAATTCGGCAACAAAATGC+GGG 0.507031 4_2:+68726791 Msa0618010:CDS
TGGCCATTGGATACGGATGT+CGG 0.507521 4_2:+68726971 Msa0618010:CDS
TGAGAGCTGGCCATTGGATA+CGG 0.507959 4_2:+68726964 Msa0618010:CDS
GGCCATTGGATACGGATGTC+GGG 0.512837 4_2:+68726972 Msa0618010:CDS
AAGAAGCTTCTGAGAAGAGA+AGG 0.518975 4_2:-68726304 None:intergenic
GACTGAGGATAACTGGGTGC+AGG 0.519180 4_2:+68727084 Msa0618010:CDS
TGATAGTGATGAGGAGGAGG+TGG 0.520072 4_2:+68726892 Msa0618010:CDS
ACAAGTACGATTAAAGGGCT+AGG 0.524252 4_2:-68727145 None:intergenic
GGAGATCAATTGTTTGGAGT+GGG 0.524391 4_2:+68727105 Msa0618010:CDS
TTAACTACTTACTATAATTG+GGG 0.524499 4_2:-68726346 None:intergenic
CATTAACATCGAGAAAGACT+TGG 0.524986 4_2:+68728286 Msa0618010:CDS
GTACGATTAAAGGGCTAGGA+TGG 0.528482 4_2:-68727141 None:intergenic
AAGAATGTAGTAGGAGATGA+TGG 0.528915 4_2:+68727037 Msa0618010:CDS
GTGCTGAAATTGATTGGGAA+GGG 0.532847 4_2:+68727059 Msa0618010:CDS
TGCTGAAATTGATTGGGAAG+GGG 0.540914 4_2:+68727060 Msa0618010:CDS
CAACAATTCCAAGGAAGCCA+AGG 0.541191 4_2:+68726699 Msa0618010:CDS
GAGGTGGAAGAAGAGGAAGA+TGG 0.541968 4_2:+68726908 Msa0618010:CDS
AGATGGTGGTGGAGAGAAGG+CGG 0.543685 4_2:+68726925 Msa0618010:CDS
ATTGGATACGGATGTCGGGT+GGG 0.544540 4_2:+68726976 Msa0618010:CDS
TGCAATTCGGCAACAAAATG+CGG 0.545718 4_2:+68726790 Msa0618010:CDS
TTGGATACGGATGTCGGGTG+GGG 0.546849 4_2:+68726977 Msa0618010:CDS
TGATTGGGAAGGGGAGACTG+AGG 0.550882 4_2:+68727069 Msa0618010:CDS
GTGGAAGAAGAGGAAGATGG+TGG 0.551552 4_2:+68726911 Msa0618010:CDS
TTAATGTCACATGGTCCTTG+TGG 0.558893 4_2:+68728636 Msa0618010:three_prime_UTR
GCCTTATCATCAATCCATGC+AGG 0.566180 4_2:-68728586 None:intergenic
GTTTCTACGAGGGAATAAGA+TGG 0.569954 4_2:+68728346 Msa0618010:CDS
GAATCATAAAGATATAATGA+AGG 0.574940 4_2:+68726823 Msa0618010:CDS
TGATGATAGTGATGAGGAGG+AGG 0.575455 4_2:+68726889 Msa0618010:CDS
AATTTCCAACAACAATTCCA+AGG 0.578397 4_2:+68726690 Msa0618010:CDS
TTGAGGAAGAGAGTGAGAGC+TGG 0.578485 4_2:+68726951 Msa0618010:CDS
AGGGGAGACTGAGGATAACT+GGG 0.579701 4_2:+68727078 Msa0618010:CDS
AGGAGATCAATTGTTTGGAG+TGG 0.582911 4_2:+68727104 Msa0618010:CDS
CAATTAATAACGTAAATACA+AGG 0.583174 4_2:-68728608 None:intergenic
CACCCGACATCCGTATCCAA+TGG 0.587765 4_2:-68726974 None:intergenic
GGTGCTGAAATTGATTGGGA+AGG 0.593647 4_2:+68727058 Msa0618010:CDS
ACAATGCAAAGAAGCCTGCA+TGG 0.600174 4_2:+68728572 Msa0618010:CDS
TAAAGATCGGTTACCTCCCA+GGG 0.600728 4_2:+68727996 Msa0618010:CDS
CAATGATGATAGTGATGAGG+AGG 0.605683 4_2:+68726886 Msa0618010:CDS
GATATAATGAAGGACAGTGT+CGG 0.611630 4_2:+68726833 Msa0618010:CDS
TGTACTGGAGTGCTAAAGAT+CGG 0.614574 4_2:+68727983 Msa0618010:CDS
AGGGAATAAGATGGTGTACA+GGG 0.616347 4_2:+68728355 Msa0618010:CDS
TATAGAATTGCAGTGCCACA+AGG 0.627861 4_2:-68728651 None:intergenic
CAGCAATGATGATAGTGATG+AGG 0.657518 4_2:+68726883 Msa0618010:CDS
ATTCCAAGGAAGCCAAGGCG+CGG 0.658601 4_2:+68726704 Msa0618010:CDS
CAGTTGGTGCTCAAAACACG+CGG 0.659680 4_2:-68726389 None:intergenic
TAAATTGACCATACCCTGGG+AGG 0.668151 4_2:-68728009 None:intergenic
AAGGCGCGGTCGTAAAAGTG+AGG 0.675835 4_2:+68726718 Msa0618010:CDS
TAAGGATGATAGAAACTCTG+AGG 0.680715 4_2:+68726664 Msa0618010:CDS
CTTTGCAGAACTCAGAACTG+CGG 0.713652 4_2:+68728516 Msa0618010:intron
AGTTGGTGCTCAAAACACGC+GGG 0.733885 4_2:-68726388 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAACTACTTACTATAATT+GGG - chr4_2:68726350-68726369 None:intergenic 15.0%
!! AATTAACTACTTACTATAAT+TGG - chr4_2:68726351-68726370 None:intergenic 15.0%
!! TACTAATTCATATTCTTATA+TGG + chr4_2:68727190-68727209 Msa0618010:intron 15.0%
!! TAGTTATATATACTTGAAAT+CGG + chr4_2:68727305-68727324 Msa0618010:intron 15.0%
!!! ATAAATTACAATCATCTTTT+GGG - chr4_2:68727508-68727527 None:intergenic 15.0%
!!! AATAAATTACAATCATCTTT+TGG - chr4_2:68727509-68727528 None:intergenic 15.0%
!!! ATCATTTTTTTTTTCATTTC+AGG - chr4_2:68728076-68728095 None:intergenic 15.0%
!! ATTAACTACTTACTATAATT+GGG - chr4_2:68726350-68726369 None:intergenic 15.0%
!! AATTAACTACTTACTATAAT+TGG - chr4_2:68726351-68726370 None:intergenic 15.0%
!! TACTAATTCATATTCTTATA+TGG + chr4_2:68727190-68727209 Msa0618010:intron 15.0%
!! TAGTTATATATACTTGAAAT+CGG + chr4_2:68727305-68727324 Msa0618010:intron 15.0%
!!! ATAAATTACAATCATCTTTT+GGG - chr4_2:68727508-68727527 None:intergenic 15.0%
!!! AATAAATTACAATCATCTTT+TGG - chr4_2:68727509-68727528 None:intergenic 15.0%
!!! ATCATTTTTTTTTTCATTTC+AGG - chr4_2:68728076-68728095 None:intergenic 15.0%
!! TTAACTACTTACTATAATTG+GGG - chr4_2:68726349-68726368 None:intergenic 20.0%
!! TGAATAGAAATTGAAAACTA+TGG - chr4_2:68726433-68726452 None:intergenic 20.0%
!! TCAATTTCTATTCAACAAAA+TGG + chr4_2:68726439-68726458 Msa0618010:exon 20.0%
!! ATAGAACATGATATTGATAT+AGG - chr4_2:68726563-68726582 None:intergenic 20.0%
!! GAATCATAAAGATATAATGA+AGG + chr4_2:68726823-68726842 Msa0618010:CDS 20.0%
!! AGTTATATATACTTGAAATC+GGG + chr4_2:68727306-68727325 Msa0618010:intron 20.0%
!!! TTTAAAGTAATACGTGATTA+TGG - chr4_2:68728239-68728258 None:intergenic 20.0%
!! TACTTTAAATTTCCTATTGT+AGG + chr4_2:68728250-68728269 Msa0618010:intron 20.0%
!! CAATTAATAACGTAAATACA+AGG - chr4_2:68728611-68728630 None:intergenic 20.0%
!!! ATTGTTTTTTTAATGTCACA+TGG + chr4_2:68728627-68728646 Msa0618010:exon 20.0%
!! TTAACTACTTACTATAATTG+GGG - chr4_2:68726349-68726368 None:intergenic 20.0%
!! TGAATAGAAATTGAAAACTA+TGG - chr4_2:68726433-68726452 None:intergenic 20.0%
!! TCAATTTCTATTCAACAAAA+TGG + chr4_2:68726439-68726458 Msa0618010:exon 20.0%
!! ATAGAACATGATATTGATAT+AGG - chr4_2:68726563-68726582 None:intergenic 20.0%
!! GAATCATAAAGATATAATGA+AGG + chr4_2:68726823-68726842 Msa0618010:CDS 20.0%
!! AGTTATATATACTTGAAATC+GGG + chr4_2:68727306-68727325 Msa0618010:intron 20.0%
!!! TTTAAAGTAATACGTGATTA+TGG - chr4_2:68728239-68728258 None:intergenic 20.0%
!! TACTTTAAATTTCCTATTGT+AGG + chr4_2:68728250-68728269 Msa0618010:intron 20.0%
!! CAATTAATAACGTAAATACA+AGG - chr4_2:68728611-68728630 None:intergenic 20.0%
!!! ATTGTTTTTTTAATGTCACA+TGG + chr4_2:68728627-68728646 Msa0618010:exon 20.0%
! AGAAATTGAAAACTATGGTT+GGG - chr4_2:68726428-68726447 None:intergenic 25.0%
! TAGAAATTGAAAACTATGGT+TGG - chr4_2:68726429-68726448 None:intergenic 25.0%
! GTTTCTATCATCCTTATTAA+TGG - chr4_2:68726660-68726679 None:intergenic 25.0%
! CAAAAACAAGTACGATTAAA+GGG - chr4_2:68727153-68727172 None:intergenic 25.0%
! TCAAAAACAAGTACGATTAA+AGG - chr4_2:68727154-68727173 None:intergenic 25.0%
! AAAGACATCTTAAAAGCAAA+AGG - chr4_2:68727481-68727500 None:intergenic 25.0%
! GATGATTGTAATTTATTCGT+AGG + chr4_2:68727512-68727531 Msa0618010:intron 25.0%
! TTATAACGCAAAAAACCAAT+AGG + chr4_2:68727544-68727563 Msa0618010:intron 25.0%
!! GATTTAGCTATAAGTTTTTG+GGG - chr4_2:68727880-68727899 None:intergenic 25.0%
!! GGATTTAGCTATAAGTTTTT+GGG - chr4_2:68727881-68727900 None:intergenic 25.0%
!! TGGATTTAGCTATAAGTTTT+TGG - chr4_2:68727882-68727901 None:intergenic 25.0%
! ATAACAAAATCAAACACCAA+AGG - chr4_2:68727906-68727925 None:intergenic 25.0%
!!! TTTGATTTTGTTATTCCACA+GGG + chr4_2:68727912-68727931 Msa0618010:intron 25.0%
! CTGATAAATAACAGAAAAGA+TGG - chr4_2:68728158-68728177 None:intergenic 25.0%
!!! AAGCATAGTTTTGTTTGTTT+TGG + chr4_2:68728428-68728447 Msa0618010:intron 25.0%
! AGAAATTGAAAACTATGGTT+GGG - chr4_2:68726428-68726447 None:intergenic 25.0%
! TAGAAATTGAAAACTATGGT+TGG - chr4_2:68726429-68726448 None:intergenic 25.0%
! GTTTCTATCATCCTTATTAA+TGG - chr4_2:68726660-68726679 None:intergenic 25.0%
! CAAAAACAAGTACGATTAAA+GGG - chr4_2:68727153-68727172 None:intergenic 25.0%
! TCAAAAACAAGTACGATTAA+AGG - chr4_2:68727154-68727173 None:intergenic 25.0%
! AAAGACATCTTAAAAGCAAA+AGG - chr4_2:68727481-68727500 None:intergenic 25.0%
! GATGATTGTAATTTATTCGT+AGG + chr4_2:68727512-68727531 Msa0618010:intron 25.0%
! TTATAACGCAAAAAACCAAT+AGG + chr4_2:68727544-68727563 Msa0618010:intron 25.0%
!! GATTTAGCTATAAGTTTTTG+GGG - chr4_2:68727880-68727899 None:intergenic 25.0%
!! GGATTTAGCTATAAGTTTTT+GGG - chr4_2:68727881-68727900 None:intergenic 25.0%
!! TGGATTTAGCTATAAGTTTT+TGG - chr4_2:68727882-68727901 None:intergenic 25.0%
! ATAACAAAATCAAACACCAA+AGG - chr4_2:68727906-68727925 None:intergenic 25.0%
!!! TTTGATTTTGTTATTCCACA+GGG + chr4_2:68727912-68727931 Msa0618010:intron 25.0%
! CTGATAAATAACAGAAAAGA+TGG - chr4_2:68728158-68728177 None:intergenic 25.0%
!!! AAGCATAGTTTTGTTTGTTT+TGG + chr4_2:68728428-68728447 Msa0618010:intron 25.0%
!! GGGTAATTTTAACAAACAGT+TGG - chr4_2:68726408-68726427 None:intergenic 30.0%
AAGAATCTCGAATGAGAAAA+AGG - chr4_2:68726503-68726522 None:intergenic 30.0%
AATGTGATGAGTAGATAAAG+TGG - chr4_2:68726534-68726553 None:intergenic 30.0%
!! TTTTGTTTGGATGTAGGATT+AGG - chr4_2:68726620-68726639 None:intergenic 30.0%
TCCAAACAAAAACCGAAAAA+TGG + chr4_2:68726629-68726648 Msa0618010:CDS 30.0%
!! ACCATTTTTCGGTTTTTGTT+TGG - chr4_2:68726633-68726652 None:intergenic 30.0%
!! TTAATGGTCACACCATTTTT+CGG - chr4_2:68726644-68726663 None:intergenic 30.0%
AAATGGTGTGACCATTAATA+AGG + chr4_2:68726646-68726665 Msa0618010:CDS 30.0%
AATTTCCAACAACAATTCCA+AGG + chr4_2:68726690-68726709 Msa0618010:CDS 30.0%
TCTCCTACTACATTCTTAAT+CGG - chr4_2:68727034-68727053 None:intergenic 30.0%
!!! TTGTTTTTGAACGCTATAAC+AGG + chr4_2:68727164-68727183 Msa0618010:CDS 30.0%
CTTCTATGCTAAGTGTTTAA+TGG + chr4_2:68727268-68727287 Msa0618010:intron 30.0%
AACTCTAGACTCAGATTAAT+CGG + chr4_2:68727355-68727374 Msa0618010:intron 30.0%
AATTCCAACATAGGTAACTT+GGG - chr4_2:68727714-68727733 None:intergenic 30.0%
TAATTCCAACATAGGTAACT+TGG - chr4_2:68727715-68727734 None:intergenic 30.0%
!!! TCGCATTTTAATTCCAACAT+AGG - chr4_2:68727723-68727742 None:intergenic 30.0%
TGAATAGTCTCACATTAGTT+AGG + chr4_2:68727744-68727763 Msa0618010:intron 30.0%
!!! GTTTGATTTTGTTATTCCAC+AGG + chr4_2:68727911-68727930 Msa0618010:intron 30.0%
AAATAAATTGACCATACCCT+GGG - chr4_2:68728015-68728034 None:intergenic 30.0%
AAAATAAATTGACCATACCC+TGG - chr4_2:68728016-68728035 None:intergenic 30.0%
!!! CTCAAATTTTGTTTCTACGA+GGG + chr4_2:68728336-68728355 Msa0618010:CDS 30.0%
!!! TTTTGTTTGTTTTGGCAACA+AGG + chr4_2:68728436-68728455 Msa0618010:intron 30.0%
!! GGGTAATTTTAACAAACAGT+TGG - chr4_2:68726408-68726427 None:intergenic 30.0%
AAGAATCTCGAATGAGAAAA+AGG - chr4_2:68726503-68726522 None:intergenic 30.0%
AATGTGATGAGTAGATAAAG+TGG - chr4_2:68726534-68726553 None:intergenic 30.0%
!! TTTTGTTTGGATGTAGGATT+AGG - chr4_2:68726620-68726639 None:intergenic 30.0%
TCCAAACAAAAACCGAAAAA+TGG + chr4_2:68726629-68726648 Msa0618010:CDS 30.0%
!! ACCATTTTTCGGTTTTTGTT+TGG - chr4_2:68726633-68726652 None:intergenic 30.0%
!! TTAATGGTCACACCATTTTT+CGG - chr4_2:68726644-68726663 None:intergenic 30.0%
AAATGGTGTGACCATTAATA+AGG + chr4_2:68726646-68726665 Msa0618010:CDS 30.0%
AATTTCCAACAACAATTCCA+AGG + chr4_2:68726690-68726709 Msa0618010:CDS 30.0%
TCTCCTACTACATTCTTAAT+CGG - chr4_2:68727034-68727053 None:intergenic 30.0%
!!! TTGTTTTTGAACGCTATAAC+AGG + chr4_2:68727164-68727183 Msa0618010:CDS 30.0%
CTTCTATGCTAAGTGTTTAA+TGG + chr4_2:68727268-68727287 Msa0618010:intron 30.0%
AACTCTAGACTCAGATTAAT+CGG + chr4_2:68727355-68727374 Msa0618010:intron 30.0%
AATTCCAACATAGGTAACTT+GGG - chr4_2:68727714-68727733 None:intergenic 30.0%
TAATTCCAACATAGGTAACT+TGG - chr4_2:68727715-68727734 None:intergenic 30.0%
!!! TCGCATTTTAATTCCAACAT+AGG - chr4_2:68727723-68727742 None:intergenic 30.0%
TGAATAGTCTCACATTAGTT+AGG + chr4_2:68727744-68727763 Msa0618010:intron 30.0%
!!! GTTTGATTTTGTTATTCCAC+AGG + chr4_2:68727911-68727930 Msa0618010:intron 30.0%
AAATAAATTGACCATACCCT+GGG - chr4_2:68728015-68728034 None:intergenic 30.0%
AAAATAAATTGACCATACCC+TGG - chr4_2:68728016-68728035 None:intergenic 30.0%
!!! CTCAAATTTTGTTTCTACGA+GGG + chr4_2:68728336-68728355 Msa0618010:CDS 30.0%
!!! TTTTGTTTGTTTTGGCAACA+AGG + chr4_2:68728436-68728455 Msa0618010:intron 30.0%
TTTGGATGTAGGATTAGGTT+CGG - chr4_2:68726615-68726634 None:intergenic 35.0%
!! TTCGGTTTTTGTTTGGATGT+AGG - chr4_2:68726626-68726645 None:intergenic 35.0%
TAAGGATGATAGAAACTCTG+AGG + chr4_2:68726664-68726683 Msa0618010:CDS 35.0%
GATATAATGAAGGACAGTGT+CGG + chr4_2:68726833-68726852 Msa0618010:CDS 35.0%
CATCCGATTAAGAATGTAGT+AGG + chr4_2:68727028-68727047 Msa0618010:CDS 35.0%
AAGAATGTAGTAGGAGATGA+TGG + chr4_2:68727037-68727056 Msa0618010:CDS 35.0%
! ATGATGGTGCTGAAATTGAT+TGG + chr4_2:68727053-68727072 Msa0618010:CDS 35.0%
! TGATGGTGCTGAAATTGATT+GGG + chr4_2:68727054-68727073 Msa0618010:CDS 35.0%
AAAACCAATAGGTCGAATGT+AGG + chr4_2:68727555-68727574 Msa0618010:intron 35.0%
TATTCCTACATTCGACCTAT+TGG - chr4_2:68727562-68727581 None:intergenic 35.0%
AATTCCCAAGTTACCTATGT+TGG + chr4_2:68727707-68727726 Msa0618010:intron 35.0%
AGTCTCACATTAGTTAGGAT+TGG + chr4_2:68727749-68727768 Msa0618010:intron 35.0%
GTCTCACATTAGTTAGGATT+GGG + chr4_2:68727750-68727769 Msa0618010:intron 35.0%
TTATAGCTAAATCCAGCCTT+TGG + chr4_2:68727887-68727906 Msa0618010:intron 35.0%
CTGGAAAAATTTGAAAGAGC+TGG + chr4_2:68727945-68727964 Msa0618010:CDS 35.0%
! AGAAAGCAATAAAGGTGTAC+TGG + chr4_2:68727968-68727987 Msa0618010:CDS 35.0%
TAGTGAGTGATCATGAAGTA+AGG - chr4_2:68728121-68728140 None:intergenic 35.0%
CAATCTTAATCGCCTACAAT+AGG - chr4_2:68728265-68728284 None:intergenic 35.0%
CATTAACATCGAGAAAGACT+TGG + chr4_2:68728286-68728305 Msa0618010:CDS 35.0%
CCTCGTAGAAACAAAATTTG+AGG - chr4_2:68728338-68728357 None:intergenic 35.0%
!!! CCTCAAATTTTGTTTCTACG+AGG + chr4_2:68728335-68728354 Msa0618010:CDS 35.0%
GCTTATTGTACACACATTGA+AGG - chr4_2:68728412-68728431 None:intergenic 35.0%
TTTGGATGTAGGATTAGGTT+CGG - chr4_2:68726615-68726634 None:intergenic 35.0%
!! TTCGGTTTTTGTTTGGATGT+AGG - chr4_2:68726626-68726645 None:intergenic 35.0%
TAAGGATGATAGAAACTCTG+AGG + chr4_2:68726664-68726683 Msa0618010:CDS 35.0%
GATATAATGAAGGACAGTGT+CGG + chr4_2:68726833-68726852 Msa0618010:CDS 35.0%
CATCCGATTAAGAATGTAGT+AGG + chr4_2:68727028-68727047 Msa0618010:CDS 35.0%
AAGAATGTAGTAGGAGATGA+TGG + chr4_2:68727037-68727056 Msa0618010:CDS 35.0%
! ATGATGGTGCTGAAATTGAT+TGG + chr4_2:68727053-68727072 Msa0618010:CDS 35.0%
! TGATGGTGCTGAAATTGATT+GGG + chr4_2:68727054-68727073 Msa0618010:CDS 35.0%
AAAACCAATAGGTCGAATGT+AGG + chr4_2:68727555-68727574 Msa0618010:intron 35.0%
TATTCCTACATTCGACCTAT+TGG - chr4_2:68727562-68727581 None:intergenic 35.0%
AATTCCCAAGTTACCTATGT+TGG + chr4_2:68727707-68727726 Msa0618010:intron 35.0%
AGTCTCACATTAGTTAGGAT+TGG + chr4_2:68727749-68727768 Msa0618010:intron 35.0%
GTCTCACATTAGTTAGGATT+GGG + chr4_2:68727750-68727769 Msa0618010:intron 35.0%
TTATAGCTAAATCCAGCCTT+TGG + chr4_2:68727887-68727906 Msa0618010:intron 35.0%
CTGGAAAAATTTGAAAGAGC+TGG + chr4_2:68727945-68727964 Msa0618010:CDS 35.0%
! AGAAAGCAATAAAGGTGTAC+TGG + chr4_2:68727968-68727987 Msa0618010:CDS 35.0%
TAGTGAGTGATCATGAAGTA+AGG - chr4_2:68728121-68728140 None:intergenic 35.0%
CAATCTTAATCGCCTACAAT+AGG - chr4_2:68728265-68728284 None:intergenic 35.0%
CATTAACATCGAGAAAGACT+TGG + chr4_2:68728286-68728305 Msa0618010:CDS 35.0%
CCTCGTAGAAACAAAATTTG+AGG - chr4_2:68728338-68728357 None:intergenic 35.0%
!!! CCTCAAATTTTGTTTCTACG+AGG + chr4_2:68728335-68728354 Msa0618010:CDS 35.0%
GCTTATTGTACACACATTGA+AGG - chr4_2:68728412-68728431 None:intergenic 35.0%
TGAGAAAAAGGTGAGAACGT+TGG - chr4_2:68726491-68726510 None:intergenic 40.0%
TTGGATGTAGGATTAGGTTC+GGG - chr4_2:68726614-68726633 None:intergenic 40.0%
! AGAACACGTTTGCTGCAATT+CGG + chr4_2:68726777-68726796 Msa0618010:CDS 40.0%
TGCAATTCGGCAACAAAATG+CGG + chr4_2:68726790-68726809 Msa0618010:CDS 40.0%
! CTATCATCATTGCTGCGTTT+TGG - chr4_2:68726878-68726897 None:intergenic 40.0%
! CAGCAATGATGATAGTGATG+AGG + chr4_2:68726883-68726902 Msa0618010:CDS 40.0%
! CAATGATGATAGTGATGAGG+AGG + chr4_2:68726886-68726905 Msa0618010:CDS 40.0%
GTGCTGAAATTGATTGGGAA+GGG + chr4_2:68727059-68727078 Msa0618010:CDS 40.0%
TGCTGAAATTGATTGGGAAG+GGG + chr4_2:68727060-68727079 Msa0618010:CDS 40.0%
AGGAGATCAATTGTTTGGAG+TGG + chr4_2:68727104-68727123 Msa0618010:CDS 40.0%
! GGAGATCAATTGTTTGGAGT+GGG + chr4_2:68727105-68727124 Msa0618010:CDS 40.0%
ACAAGTACGATTAAAGGGCT+AGG - chr4_2:68727148-68727167 None:intergenic 40.0%
CAAAATCAAACACCAAAGGC+TGG - chr4_2:68727902-68727921 None:intergenic 40.0%
AGAGCTGGAGAAAGCAATAA+AGG + chr4_2:68727960-68727979 Msa0618010:CDS 40.0%
! TGTACTGGAGTGCTAAAGAT+CGG + chr4_2:68727983-68728002 Msa0618010:CDS 40.0%
CAGTACACAAGTGTTACAAG+CGG + chr4_2:68728175-68728194 Msa0618010:intron 40.0%
! AAGAGACTCCAGGTGTTATA+TGG - chr4_2:68728209-68728228 None:intergenic 40.0%
AGGACATTCTCGAACTTTCA+GGG - chr4_2:68728318-68728337 None:intergenic 40.0%
GTTTCTACGAGGGAATAAGA+TGG + chr4_2:68728346-68728365 Msa0618010:CDS 40.0%
AGGGAATAAGATGGTGTACA+GGG + chr4_2:68728355-68728374 Msa0618010:CDS 40.0%
AGCAACAGTGCATCATTATG+AGG - chr4_2:68728491-68728510 None:intergenic 40.0%
TTAATGTCACATGGTCCTTG+TGG + chr4_2:68728636-68728655 Msa0618010:three_prime_UTR 40.0%
TATAGAATTGCAGTGCCACA+AGG - chr4_2:68728654-68728673 None:intergenic 40.0%
! AGAAGCTTCTGAGAAGAGAA+GGG - chr4_2:68726306-68726325 None:intergenic 40.0%
! AAGAAGCTTCTGAGAAGAGA+AGG - chr4_2:68726307-68726326 None:intergenic 40.0%
TGAGAAAAAGGTGAGAACGT+TGG - chr4_2:68726491-68726510 None:intergenic 40.0%
TTGGATGTAGGATTAGGTTC+GGG - chr4_2:68726614-68726633 None:intergenic 40.0%
! AGAACACGTTTGCTGCAATT+CGG + chr4_2:68726777-68726796 Msa0618010:CDS 40.0%
TGCAATTCGGCAACAAAATG+CGG + chr4_2:68726790-68726809 Msa0618010:CDS 40.0%
! CTATCATCATTGCTGCGTTT+TGG - chr4_2:68726878-68726897 None:intergenic 40.0%
! CAGCAATGATGATAGTGATG+AGG + chr4_2:68726883-68726902 Msa0618010:CDS 40.0%
! CAATGATGATAGTGATGAGG+AGG + chr4_2:68726886-68726905 Msa0618010:CDS 40.0%
GTGCTGAAATTGATTGGGAA+GGG + chr4_2:68727059-68727078 Msa0618010:CDS 40.0%
TGCTGAAATTGATTGGGAAG+GGG + chr4_2:68727060-68727079 Msa0618010:CDS 40.0%
AGGAGATCAATTGTTTGGAG+TGG + chr4_2:68727104-68727123 Msa0618010:CDS 40.0%
! GGAGATCAATTGTTTGGAGT+GGG + chr4_2:68727105-68727124 Msa0618010:CDS 40.0%
ACAAGTACGATTAAAGGGCT+AGG - chr4_2:68727148-68727167 None:intergenic 40.0%
CAAAATCAAACACCAAAGGC+TGG - chr4_2:68727902-68727921 None:intergenic 40.0%
AGAGCTGGAGAAAGCAATAA+AGG + chr4_2:68727960-68727979 Msa0618010:CDS 40.0%
! TGTACTGGAGTGCTAAAGAT+CGG + chr4_2:68727983-68728002 Msa0618010:CDS 40.0%
CAGTACACAAGTGTTACAAG+CGG + chr4_2:68728175-68728194 Msa0618010:intron 40.0%
! AAGAGACTCCAGGTGTTATA+TGG - chr4_2:68728209-68728228 None:intergenic 40.0%
AGGACATTCTCGAACTTTCA+GGG - chr4_2:68728318-68728337 None:intergenic 40.0%
GTTTCTACGAGGGAATAAGA+TGG + chr4_2:68728346-68728365 Msa0618010:CDS 40.0%
AGGGAATAAGATGGTGTACA+GGG + chr4_2:68728355-68728374 Msa0618010:CDS 40.0%
AGCAACAGTGCATCATTATG+AGG - chr4_2:68728491-68728510 None:intergenic 40.0%
TTAATGTCACATGGTCCTTG+TGG + chr4_2:68728636-68728655 Msa0618010:three_prime_UTR 40.0%
TATAGAATTGCAGTGCCACA+AGG - chr4_2:68728654-68728673 None:intergenic 40.0%
! TTGGAGGCATAAGAGCTGTT+TGG - chr4_2:68726472-68726491 None:intergenic 45.0%
GAAAAAGGTGAGAACGTTGG+AGG - chr4_2:68726488-68726507 None:intergenic 45.0%
! TGTAGGATTAGGTTCGGGTT+CGG - chr4_2:68726609-68726628 None:intergenic 45.0%
GGCTTCCTTGGAATTGTTGT+TGG - chr4_2:68726698-68726717 None:intergenic 45.0%
CAACAATTCCAAGGAAGCCA+AGG + chr4_2:68726699-68726718 Msa0618010:CDS 45.0%
! AGATTTTGTACGCGACAGAC+TGG + chr4_2:68726754-68726773 Msa0618010:CDS 45.0%
GCAATTCGGCAACAAAATGC+GGG + chr4_2:68726791-68726810 Msa0618010:CDS 45.0%
! TGATGATAGTGATGAGGAGG+AGG + chr4_2:68726889-68726908 Msa0618010:CDS 45.0%
! GGTGCTGAAATTGATTGGGA+AGG + chr4_2:68727058-68727077 Msa0618010:CDS 45.0%
GGTGCAGGAGATCAATTGTT+TGG + chr4_2:68727099-68727118 Msa0618010:CDS 45.0%
GTACGATTAAAGGGCTAGGA+TGG - chr4_2:68727144-68727163 None:intergenic 45.0%
TTGGGGAGTCTAGAAACATC+AGG - chr4_2:68727863-68727882 None:intergenic 45.0%
TCCACAGGGCAAATGATAAC+TGG + chr4_2:68727926-68727945 Msa0618010:intron 45.0%
TCCAGTTATCATTTGCCCTG+TGG - chr4_2:68727930-68727949 None:intergenic 45.0%
TAAAGATCGGTTACCTCCCA+GGG + chr4_2:68727996-68728015 Msa0618010:CDS 45.0%
TAAATTGACCATACCCTGGG+AGG - chr4_2:68728012-68728031 None:intergenic 45.0%
TAACCTCGCCATATAACACC+TGG + chr4_2:68728198-68728217 Msa0618010:intron 45.0%
TGGAAAACGTAAGAGACTCC+AGG - chr4_2:68728219-68728238 None:intergenic 45.0%
GAGGACATTCTCGAACTTTC+AGG - chr4_2:68728319-68728338 None:intergenic 45.0%
GAGGGAATAAGATGGTGTAC+AGG + chr4_2:68728354-68728373 Msa0618010:CDS 45.0%
AAGATGGTGTACAGGGAGAA+AGG + chr4_2:68728362-68728381 Msa0618010:CDS 45.0%
CTTTGCAGAACTCAGAACTG+CGG + chr4_2:68728516-68728535 Msa0618010:intron 45.0%
ACAATGCAAAGAAGCCTGCA+TGG + chr4_2:68728572-68728591 Msa0618010:CDS 45.0%
! GCCTGCATGGATTGATGATA+AGG + chr4_2:68728585-68728604 Msa0618010:CDS 45.0%
GCCTTATCATCAATCCATGC+AGG - chr4_2:68728589-68728608 None:intergenic 45.0%
! TTGGAGGCATAAGAGCTGTT+TGG - chr4_2:68726472-68726491 None:intergenic 45.0%
GAAAAAGGTGAGAACGTTGG+AGG - chr4_2:68726488-68726507 None:intergenic 45.0%
! TGTAGGATTAGGTTCGGGTT+CGG - chr4_2:68726609-68726628 None:intergenic 45.0%
GGCTTCCTTGGAATTGTTGT+TGG - chr4_2:68726698-68726717 None:intergenic 45.0%
CAACAATTCCAAGGAAGCCA+AGG + chr4_2:68726699-68726718 Msa0618010:CDS 45.0%
! AGATTTTGTACGCGACAGAC+TGG + chr4_2:68726754-68726773 Msa0618010:CDS 45.0%
GCAATTCGGCAACAAAATGC+GGG + chr4_2:68726791-68726810 Msa0618010:CDS 45.0%
! TGATGATAGTGATGAGGAGG+AGG + chr4_2:68726889-68726908 Msa0618010:CDS 45.0%
! GGTGCTGAAATTGATTGGGA+AGG + chr4_2:68727058-68727077 Msa0618010:CDS 45.0%
GGTGCAGGAGATCAATTGTT+TGG + chr4_2:68727099-68727118 Msa0618010:CDS 45.0%
GTACGATTAAAGGGCTAGGA+TGG - chr4_2:68727144-68727163 None:intergenic 45.0%
TTGGGGAGTCTAGAAACATC+AGG - chr4_2:68727863-68727882 None:intergenic 45.0%
TCCACAGGGCAAATGATAAC+TGG + chr4_2:68727926-68727945 Msa0618010:intron 45.0%
TCCAGTTATCATTTGCCCTG+TGG - chr4_2:68727930-68727949 None:intergenic 45.0%
TAAAGATCGGTTACCTCCCA+GGG + chr4_2:68727996-68728015 Msa0618010:CDS 45.0%
TAAATTGACCATACCCTGGG+AGG - chr4_2:68728012-68728031 None:intergenic 45.0%
TAACCTCGCCATATAACACC+TGG + chr4_2:68728198-68728217 Msa0618010:intron 45.0%
TGGAAAACGTAAGAGACTCC+AGG - chr4_2:68728219-68728238 None:intergenic 45.0%
GAGGACATTCTCGAACTTTC+AGG - chr4_2:68728319-68728338 None:intergenic 45.0%
GAGGGAATAAGATGGTGTAC+AGG + chr4_2:68728354-68728373 Msa0618010:CDS 45.0%
AAGATGGTGTACAGGGAGAA+AGG + chr4_2:68728362-68728381 Msa0618010:CDS 45.0%
CTTTGCAGAACTCAGAACTG+CGG + chr4_2:68728516-68728535 Msa0618010:intron 45.0%
ACAATGCAAAGAAGCCTGCA+TGG + chr4_2:68728572-68728591 Msa0618010:CDS 45.0%
! GCCTGCATGGATTGATGATA+AGG + chr4_2:68728585-68728604 Msa0618010:CDS 45.0%
GCCTTATCATCAATCCATGC+AGG - chr4_2:68728589-68728608 None:intergenic 45.0%
!! TAAATAAATGATATATAAAA+AGG + chr4_2:68727774-68727793 Msa0618010:intron 5.0%
!! TAAATAAATGATATATAAAA+AGG + chr4_2:68727774-68727793 Msa0618010:intron 5.0%
! AGTTGGTGCTCAAAACACGC+GGG - chr4_2:68726391-68726410 None:intergenic 50.0%
! CAGTTGGTGCTCAAAACACG+CGG - chr4_2:68726392-68726411 None:intergenic 50.0%
! GTAGGATTAGGTTCGGGTTC+GGG - chr4_2:68726608-68726627 None:intergenic 50.0%
GCAACAAAATGCGGGTGCTT+TGG + chr4_2:68726799-68726818 Msa0618010:CDS 50.0%
! TGATAGTGATGAGGAGGAGG+TGG + chr4_2:68726892-68726911 Msa0618010:CDS 50.0%
GAGGTGGAAGAAGAGGAAGA+TGG + chr4_2:68726908-68726927 Msa0618010:CDS 50.0%
GTGGAAGAAGAGGAAGATGG+TGG + chr4_2:68726911-68726930 Msa0618010:CDS 50.0%
! GAAGAAGAGGAAGATGGTGG+TGG + chr4_2:68726914-68726933 Msa0618010:CDS 50.0%
TTGAGGAAGAGAGTGAGAGC+TGG + chr4_2:68726951-68726970 Msa0618010:CDS 50.0%
TGAGAGCTGGCCATTGGATA+CGG + chr4_2:68726964-68726983 Msa0618010:CDS 50.0%
TGGCCATTGGATACGGATGT+CGG + chr4_2:68726971-68726990 Msa0618010:CDS 50.0%
ATTGGATACGGATGTCGGGT+GGG + chr4_2:68726976-68726995 Msa0618010:CDS 50.0%
AAGGGGAGACTGAGGATAAC+TGG + chr4_2:68727077-68727096 Msa0618010:CDS 50.0%
AGGGGAGACTGAGGATAACT+GGG + chr4_2:68727078-68727097 Msa0618010:CDS 50.0%
CTAAAGATCGGTTACCTCCC+AGG + chr4_2:68727995-68728014 Msa0618010:CDS 50.0%
! ACTCCAGGTGTTATATGGCG+AGG - chr4_2:68728204-68728223 None:intergenic 50.0%
! AGTTGGTGCTCAAAACACGC+GGG - chr4_2:68726391-68726410 None:intergenic 50.0%
! CAGTTGGTGCTCAAAACACG+CGG - chr4_2:68726392-68726411 None:intergenic 50.0%
! GTAGGATTAGGTTCGGGTTC+GGG - chr4_2:68726608-68726627 None:intergenic 50.0%
GCAACAAAATGCGGGTGCTT+TGG + chr4_2:68726799-68726818 Msa0618010:CDS 50.0%
! TGATAGTGATGAGGAGGAGG+TGG + chr4_2:68726892-68726911 Msa0618010:CDS 50.0%
GAGGTGGAAGAAGAGGAAGA+TGG + chr4_2:68726908-68726927 Msa0618010:CDS 50.0%
GTGGAAGAAGAGGAAGATGG+TGG + chr4_2:68726911-68726930 Msa0618010:CDS 50.0%
! GAAGAAGAGGAAGATGGTGG+TGG + chr4_2:68726914-68726933 Msa0618010:CDS 50.0%
TTGAGGAAGAGAGTGAGAGC+TGG + chr4_2:68726951-68726970 Msa0618010:CDS 50.0%
TGAGAGCTGGCCATTGGATA+CGG + chr4_2:68726964-68726983 Msa0618010:CDS 50.0%
TGGCCATTGGATACGGATGT+CGG + chr4_2:68726971-68726990 Msa0618010:CDS 50.0%
ATTGGATACGGATGTCGGGT+GGG + chr4_2:68726976-68726995 Msa0618010:CDS 50.0%
AAGGGGAGACTGAGGATAAC+TGG + chr4_2:68727077-68727096 Msa0618010:CDS 50.0%
AGGGGAGACTGAGGATAACT+GGG + chr4_2:68727078-68727097 Msa0618010:CDS 50.0%
CTAAAGATCGGTTACCTCCC+AGG + chr4_2:68727995-68728014 Msa0618010:CDS 50.0%
! ACTCCAGGTGTTATATGGCG+AGG - chr4_2:68728204-68728223 None:intergenic 50.0%
ATTCCAAGGAAGCCAAGGCG+CGG + chr4_2:68726704-68726723 Msa0618010:CDS 55.0%
!! TCACTTTTACGACCGCGCCT+TGG - chr4_2:68726719-68726738 None:intergenic 55.0%
AAGGCGCGGTCGTAAAAGTG+AGG + chr4_2:68726718-68726737 Msa0618010:CDS 55.0%
TGAGGAGGAGGTGGAAGAAG+AGG + chr4_2:68726901-68726920 Msa0618010:CDS 55.0%
!! GGAAGATGGTGGTGGAGAGA+AGG + chr4_2:68726922-68726941 Msa0618010:CDS 55.0%
!! AGATGGTGGTGGAGAGAAGG+CGG + chr4_2:68726925-68726944 Msa0618010:CDS 55.0%
TGGAGAGAAGGCGGTGATTG+AGG + chr4_2:68726934-68726953 Msa0618010:CDS 55.0%
AGAGAGTGAGAGCTGGCCAT+TGG + chr4_2:68726958-68726977 Msa0618010:CDS 55.0%
GGCCATTGGATACGGATGTC+GGG + chr4_2:68726972-68726991 Msa0618010:CDS 55.0%
CACCCGACATCCGTATCCAA+TGG - chr4_2:68726977-68726996 None:intergenic 55.0%
CATTGGATACGGATGTCGGG+TGG + chr4_2:68726975-68726994 Msa0618010:CDS 55.0%
TTGGATACGGATGTCGGGTG+GGG + chr4_2:68726977-68726996 Msa0618010:CDS 55.0%
TGATTGGGAAGGGGAGACTG+AGG + chr4_2:68727069-68727088 Msa0618010:CDS 55.0%
GACTGAGGATAACTGGGTGC+AGG + chr4_2:68727084-68727103 Msa0618010:CDS 55.0%
! CTGAGTCTAGAGTTGCACGC+AGG - chr4_2:68727349-68727368 None:intergenic 55.0%
ATCGGTTACCTCCCAGGGTA+TGG + chr4_2:68728001-68728020 Msa0618010:intron 55.0%
ACTCAGAACTGCGGATGAGC+TGG + chr4_2:68728525-68728544 Msa0618010:CDS 55.0%
ATTCCAAGGAAGCCAAGGCG+CGG + chr4_2:68726704-68726723 Msa0618010:CDS 55.0%
!! TCACTTTTACGACCGCGCCT+TGG - chr4_2:68726719-68726738 None:intergenic 55.0%
AAGGCGCGGTCGTAAAAGTG+AGG + chr4_2:68726718-68726737 Msa0618010:CDS 55.0%
TGAGGAGGAGGTGGAAGAAG+AGG + chr4_2:68726901-68726920 Msa0618010:CDS 55.0%
!! GGAAGATGGTGGTGGAGAGA+AGG + chr4_2:68726922-68726941 Msa0618010:CDS 55.0%
!! AGATGGTGGTGGAGAGAAGG+CGG + chr4_2:68726925-68726944 Msa0618010:CDS 55.0%
TGGAGAGAAGGCGGTGATTG+AGG + chr4_2:68726934-68726953 Msa0618010:CDS 55.0%
AGAGAGTGAGAGCTGGCCAT+TGG + chr4_2:68726958-68726977 Msa0618010:CDS 55.0%
GGCCATTGGATACGGATGTC+GGG + chr4_2:68726972-68726991 Msa0618010:CDS 55.0%
CACCCGACATCCGTATCCAA+TGG - chr4_2:68726977-68726996 None:intergenic 55.0%
CATTGGATACGGATGTCGGG+TGG + chr4_2:68726975-68726994 Msa0618010:CDS 55.0%
TTGGATACGGATGTCGGGTG+GGG + chr4_2:68726977-68726996 Msa0618010:CDS 55.0%
TGATTGGGAAGGGGAGACTG+AGG + chr4_2:68727069-68727088 Msa0618010:CDS 55.0%
GACTGAGGATAACTGGGTGC+AGG + chr4_2:68727084-68727103 Msa0618010:CDS 55.0%
! CTGAGTCTAGAGTTGCACGC+AGG - chr4_2:68727349-68727368 None:intergenic 55.0%
ATCGGTTACCTCCCAGGGTA+TGG + chr4_2:68728001-68728020 Msa0618010:intron 55.0%
ACTCAGAACTGCGGATGAGC+TGG + chr4_2:68728525-68728544 Msa0618010:CDS 55.0%
CGACCGCGCCTTGGCTTCCT+TGG - chr4_2:68726710-68726729 None:intergenic 70.0%
CGACCGCGCCTTGGCTTCCT+TGG - chr4_2:68726710-68726729 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 68726305 68728744 68726305 ID=Msa0618010;Name=Msa0618010
chr4_2 mRNA 68726305 68728744 68726305 ID=Msa0618010-mRNA-1;Parent=Msa0618010;Name=Msa0618010-mRNA-1;_AED=0.03;_eAED=0.03;_QI=153|1|1|1|1|1|4|117|342
chr4_2 exon 68726305 68727185 68726305 ID=Msa0618010-mRNA-1:exon:19776;Parent=Msa0618010-mRNA-1
chr4_2 exon 68727933 68728017 68727933 ID=Msa0618010-mRNA-1:exon:19777;Parent=Msa0618010-mRNA-1
chr4_2 exon 68728272 68728383 68728272 ID=Msa0618010-mRNA-1:exon:19778;Parent=Msa0618010-mRNA-1
chr4_2 exon 68728524 68728744 68728524 ID=Msa0618010-mRNA-1:exon:19779;Parent=Msa0618010-mRNA-1
chr4_2 five_prime_UTR 68726305 68726457 68726305 ID=Msa0618010-mRNA-1:five_prime_utr;Parent=Msa0618010-mRNA-1
chr4_2 CDS 68726458 68727185 68726458 ID=Msa0618010-mRNA-1:cds;Parent=Msa0618010-mRNA-1
chr4_2 CDS 68727933 68728017 68727933 ID=Msa0618010-mRNA-1:cds;Parent=Msa0618010-mRNA-1
chr4_2 CDS 68728272 68728383 68728272 ID=Msa0618010-mRNA-1:cds;Parent=Msa0618010-mRNA-1
chr4_2 CDS 68728524 68728627 68728524 ID=Msa0618010-mRNA-1:cds;Parent=Msa0618010-mRNA-1
chr4_2 three_prime_UTR 68728628 68728744 68728628 ID=Msa0618010-mRNA-1:three_prime_utr;Parent=Msa0618010-mRNA-1
Gene Sequence

>Msa0618010

ATGGTCATTCTCCAAACAGCTCTTATGCCTCCAACGTTCTCACCTTTTTCTCATTCGAGATTCTTATCTTATTCCACTTTATCTACTCATCACATTGTAAAGCCTATATCAATATCATGTTCTATTTCAACTAACTCTAGTTCAAAACCCGAACCCGAACCTAATCCTACATCCAAACAAAAACCGAAAAATGGTGTGACCATTAATAAGGATGATAGAAACTCTGAGGATGAATTTCCAACAACAATTCCAAGGAAGCCAAGGCGCGGTCGTAAAAGTGAGGCTATGAAAGTTGAAGATTTTGTACGCGACAGACTGGAGAACACGTTTGCTGCAATTCGGCAACAAAATGCGGGTGCTTTGGAGAATCATAAAGATATAATGAAGGACAGTGTCGGTGATGATTCTGAATCAAAACCAAAACGCAGCAATGATGATAGTGATGAGGAGGAGGTGGAAGAAGAGGAAGATGGTGGTGGAGAGAAGGCGGTGATTGAGGAAGAGAGTGAGAGCTGGCCATTGGATACGGATGTCGGGTGGGGAATAAGAGCTTCTGAGTATTTTGAGAAGCATCCGATTAAGAATGTAGTAGGAGATGATGGTGCTGAAATTGATTGGGAAGGGGAGACTGAGGATAACTGGGTGCAGGAGATCAATTGTTTGGAGTGGGAGAGTTTTGCTTTCCATCCTAGCCCTTTAATCGTACTTGTTTTTGAACGCTATAACAGGGCAAATGATAACTGGAAAAATTTGAAAGAGCTGGAGAAAGCAATAAAGGTGTACTGGAGTGCTAAAGATCGGTTACCTCCCAGGGCGATTAAGATTGACATTAACATCGAGAAAGACTTGGCTTATGCCCTGAAAGTTCGAGAATGTCCTCAAATTTTGTTTCTACGAGGGAATAAGATGGTGTACAGGGAGAAAGAACTCAGAACTGCGGATGAGCTGGTTCAGATGATTGCATTTTTTTATTACAATGCAAAGAAGCCTGCATGGATTGATGATAAGGCCTTGTATTTACGTTATTAA

Protein sequence

>Msa0618010

MVILQTALMPPTFSPFSHSRFLSYSTLSTHHIVKPISISCSISTNSSSKPEPEPNPTSKQKPKNGVTINKDDRNSEDEFPTTIPRKPRRGRKSEAMKVEDFVRDRLENTFAAIRQQNAGALENHKDIMKDSVGDDSESKPKRSNDDSDEEEVEEEEDGGGEKAVIEEESESWPLDTDVGWGIRASEYFEKHPIKNVVGDDGAEIDWEGETEDNWVQEINCLEWESFAFHPSPLIVLVFERYNRANDNWKNLKELEKAIKVYWSAKDRLPPRAIKIDINIEKDLAYALKVRECPQILFLRGNKMVYREKELRTADELVQMIAFFYYNAKKPAWIDDKALYLRY*