AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0813720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0813720 MtrunA17_Chr5g0431431 71.031 359 86 3 1 357 1 343 1.03e-175 494
Msa0813720 MtrunA17_Chr5g0431441 51.535 456 163 6 10 409 18 471 8.50e-167 476
Msa0813720 MtrunA17_Chr3g0106231 53.097 452 169 8 2 412 9 458 1.49e-155 447
Msa0813720 MtrunA17_Chr5g0431421 48.869 442 179 8 10 405 10 450 1.03e-140 409
Msa0813720 MtrunA17_Chr5g0431361 48.416 442 180 7 10 403 12 453 1.32e-140 409
Msa0813720 MtrunA17_Chr5g0431401 48.636 440 179 7 10 403 10 448 1.28e-139 406
Msa0813720 MtrunA17_Chr5g0432731 74.219 256 62 2 153 404 42 297 2.00e-139 400
Msa0813720 MtrunA17_Chr5g0431371 47.608 439 185 6 10 403 10 448 3.74e-138 402
Msa0813720 MtrunA17_Chr3g0106251 57.915 259 106 2 155 412 44 300 2.12e-102 306
Msa0813720 MtrunA17_Chr5g0432741 69.512 164 41 1 1 155 1 164 7.96e-74 228
Msa0813720 MtrunA17_Chr8g0380531 31.906 467 244 17 1 403 1 457 1.12e-56 193
Msa0813720 MtrunA17_Chr6g0464861 31.373 459 236 15 10 404 11 454 1.74e-54 187
Msa0813720 MtrunA17_Chr6g0464841 29.670 455 250 15 10 404 11 455 2.13e-53 184
Msa0813720 MtrunA17_Chr5g0414331 30.067 449 245 13 10 400 13 450 2.16e-52 181
Msa0813720 MtrunA17_Chr6g0464871 29.348 460 249 13 10 406 23 469 2.22e-51 179
Msa0813720 MtrunA17_Chr5g0414321 29.139 453 252 13 10 404 11 452 1.57e-49 174
Msa0813720 MtrunA17_Chr6g0464921 29.360 453 253 13 10 403 11 455 1.84e-49 174
Msa0813720 MtrunA17_Chr6g0464881 29.462 465 250 15 10 410 11 461 4.96e-48 170
Msa0813720 MtrunA17_Chr7g0249931 29.204 452 254 16 10 403 40 483 1.03e-47 169
Msa0813720 MtrunA17_Chr7g0250001 30.277 469 244 18 10 413 6 456 1.52e-47 168
Msa0813720 MtrunA17_Chr8g0377921 26.190 462 269 11 12 404 6 464 5.54e-47 167
Msa0813720 MtrunA17_Chr7g0249981 29.004 462 254 15 10 410 25 473 3.12e-46 166
Msa0813720 MtrunA17_Chr3g0106241 55.705 149 59 3 2 143 9 157 9.72e-46 156
Msa0813720 MtrunA17_Chr5g0426431 29.253 482 245 16 7 404 9 478 1.72e-45 163
Msa0813720 MtrunA17_Chr3g0118671 28.008 482 251 12 10 406 6 476 1.07e-44 161
Msa0813720 MtrunA17_Chr8g0377941 27.948 458 261 10 12 404 9 462 1.70e-44 160
Msa0813720 MtrunA17_Chr3g0121991 26.514 479 259 12 9 404 78 546 7.62e-44 160
Msa0813720 MtrunA17_Chr5g0448521 27.119 472 255 12 14 406 9 470 6.97e-43 156
Msa0813720 MtrunA17_Chr1g0207951 28.448 464 251 14 10 406 124 573 1.07e-42 160
Msa0813720 MtrunA17_Chr1g0207951 27.669 459 263 12 12 406 658 1111 1.01e-40 154
Msa0813720 MtrunA17_Chr6g0454191 27.515 487 246 14 10 404 10 481 1.23e-42 156
Msa0813720 MtrunA17_Chr3g0118771 28.601 486 243 15 10 406 21 491 1.39e-42 156
Msa0813720 MtrunA17_Chr3g0122001 28.243 478 251 16 9 403 5 473 1.87e-42 159
Msa0813720 MtrunA17_Chr3g0122001 27.406 478 254 15 9 403 485 952 3.45e-41 155
Msa0813720 MtrunA17_Chr4g0053501 27.273 462 258 14 12 404 13 465 4.63e-42 154
Msa0813720 MtrunA17_Chr2g0278711 26.834 477 257 13 10 404 11 477 7.84e-42 154
Msa0813720 MtrunA17_Chr6g0454151 27.651 481 250 13 10 404 10 478 9.37e-42 153
Msa0813720 MtrunA17_Chr1g0207931 28.054 442 234 10 10 403 92 497 1.05e-41 154
Msa0813720 MtrunA17_Chr1g0159551 28.062 449 257 16 15 404 19 460 1.66e-41 152
Msa0813720 MtrunA17_Chr3g0098111 27.564 468 258 10 10 403 9 469 3.34e-41 152
Msa0813720 MtrunA17_Chr6g0454181 27.329 483 251 13 10 404 10 480 4.18e-41 152
Msa0813720 MtrunA17_Chr6g0454131 29.461 482 241 14 10 404 10 479 6.31e-41 151
Msa0813720 MtrunA17_Chr6g0454121 27.801 482 249 12 10 404 10 479 7.12e-41 151
Msa0813720 MtrunA17_Chr8g0336331 26.033 484 255 16 9 404 9 477 9.45e-41 150
Msa0813720 MtrunA17_Chr1g0173121 28.105 459 253 17 12 404 16 463 9.49e-41 150
Msa0813720 MtrunA17_Chr6g0454331 26.789 489 258 14 10 409 7 484 1.11e-40 150
Msa0813720 MtrunA17_Chr6g0454341 26.294 483 254 15 10 404 10 478 1.33e-40 150
Msa0813720 MtrunA17_Chr3g0118691 27.572 486 248 15 10 406 15 485 2.16e-40 150
Msa0813720 MtrunA17_Chr1g0207981 26.096 479 252 16 10 404 13 473 2.53e-40 149
Msa0813720 MtrunA17_Chr1g0207831 27.312 465 264 12 12 408 10 468 2.66e-40 149
Msa0813720 MtrunA17_Chr3g0078841 25.413 484 257 14 10 404 10 478 2.67e-40 149
Msa0813720 MtrunA17_Chr4g0053321 28.228 457 246 15 19 404 35 480 3.70e-40 149
Msa0813720 MtrunA17_Chr6g0454141 27.273 484 250 15 10 404 10 480 3.77e-40 149
Msa0813720 MtrunA17_Chr1g0207971 27.826 460 258 15 10 406 8 456 4.50e-40 148
Msa0813720 MtrunA17_Chr6g0452771 27.386 482 252 13 10 404 10 480 4.67e-40 149
Msa0813720 MtrunA17_Chr1g0207861 27.273 484 253 12 10 410 8 475 4.94e-40 149
Msa0813720 MtrunA17_Chr3g0118701 27.479 484 247 15 10 404 15 483 5.27e-40 149
Msa0813720 MtrunA17_Chr3g0092641 28.184 479 248 16 10 404 12 478 5.80e-40 148
Msa0813720 MtrunA17_Chr8g0359821 26.337 486 260 12 10 409 10 483 1.56e-39 147
Msa0813720 MtrunA17_Chr8g0365811 27.479 484 250 12 12 410 497 964 2.12e-39 150
Msa0813720 MtrunA17_Chr8g0365811 27.364 497 238 13 12 410 11 482 1.60e-33 133
Msa0813720 MtrunA17_Chr7g0217881 26.483 472 251 13 10 404 10 462 2.40e-39 146
Msa0813720 MtrunA17_Chr3g0118711 26.465 495 259 14 1 404 1 481 2.71e-39 147
Msa0813720 MtrunA17_Chr3g0112771 26.432 454 272 7 14 413 16 461 2.79e-39 146
Msa0813720 MtrunA17_Chr6g0453961 28.507 442 215 13 10 361 19 449 7.31e-39 145
Msa0813720 MtrunA17_Chr3g0079731 36.364 253 121 7 184 406 243 485 8.79e-39 145
Msa0813720 MtrunA17_Chr6g0454291 26.708 483 254 12 10 404 7 477 1.03e-38 145
Msa0813720 MtrunA17_Chr6g0454261 26.477 491 255 14 10 409 10 485 1.35e-38 145
Msa0813720 MtrunA17_Chr6g0454361 26.708 483 254 14 10 404 11 481 1.53e-38 144
Msa0813720 MtrunA17_Chr6g0453951 27.066 484 251 15 10 404 57 527 1.65e-38 145
Msa0813720 MtrunA17_Chr7g0243681 26.681 476 260 16 10 403 11 479 1.74e-38 144
Msa0813720 MtrunA17_Chr5g0401721 33.840 263 148 7 161 404 216 471 3.92e-38 143
Msa0813720 MtrunA17_Chr6g0454401 26.186 485 255 13 10 404 10 481 4.63e-38 143
Msa0813720 MtrunA17_Chr6g0454301 25.673 483 257 15 10 404 263 731 1.53e-37 144
Msa0813720 MtrunA17_Chr6g0454301 31.760 233 133 7 187 402 5 228 2.10e-24 105
Msa0813720 MtrunA17_Chr5g0423981 29.103 457 241 17 10 404 10 445 2.85e-37 140
Msa0813720 MtrunA17_Chr7g0265051 26.775 493 247 15 10 404 9 485 3.58e-37 141
Msa0813720 MtrunA17_Chr3g0118751 27.311 476 233 15 10 406 6 447 5.75e-37 140
Msa0813720 MtrunA17_Chr2g0302991 27.033 418 234 14 51 403 51 462 5.79e-37 140
Msa0813720 MtrunA17_Chr3g0118661 26.915 483 255 12 10 407 13 482 7.32e-37 140
Msa0813720 MtrunA17_Chr5g0429711 27.332 461 250 17 14 403 15 461 8.03e-37 139
Msa0813720 MtrunA17_Chr7g0218811 28.348 448 248 13 10 400 15 446 9.05e-37 139
Msa0813720 MtrunA17_Chr7g0275511 26.201 458 257 13 14 397 19 469 9.82e-37 139
Msa0813720 MtrunA17_Chr6g0454321 25.373 469 252 12 10 392 10 466 2.50e-36 140
Msa0813720 MtrunA17_Chr5g0442561 25.053 475 262 14 14 406 9 471 3.52e-36 138
Msa0813720 MtrunA17_Chr3g0118721 32.967 273 143 8 159 406 35 292 4.62e-36 134
Msa0813720 MtrunA17_Chr7g0243631 25.051 495 270 18 1 403 1 486 1.00e-35 137
Msa0813720 MtrunA17_Chr4g0014061 26.407 462 260 16 14 400 13 469 1.13e-35 137
Msa0813720 MtrunA17_Chr2g0302961 28.824 340 187 10 113 403 132 465 1.29e-35 136
Msa0813720 MtrunA17_Chr6g0454201 26.804 485 251 14 10 404 11 481 1.85e-35 136
Msa0813720 MtrunA17_Chr1g0179901 25.407 492 275 13 1 404 7 494 2.16e-35 136
Msa0813720 MtrunA17_Chr3g0112761 25.328 458 262 11 12 405 10 451 2.31e-35 135
Msa0813720 MtrunA17_Chr6g0454351 25.678 479 247 16 10 404 12 465 3.04e-35 135
Msa0813720 MtrunA17_Chr8g0373301 27.254 477 251 16 2 399 3 462 5.81e-35 134
Msa0813720 MtrunA17_Chr7g0218791 28.665 457 240 17 10 400 5 441 6.00e-35 134
Msa0813720 MtrunA17_Chr5g0442601 25.103 486 260 14 14 408 408 880 1.47e-34 136
Msa0813720 MtrunA17_Chr5g0442601 24.382 283 157 6 99 336 63 333 3.82e-20 93.2
Msa0813720 MtrunA17_Chr5g0442541 25.212 472 258 12 14 404 9 466 1.75e-34 133
Msa0813720 MtrunA17_Chr4g0042891 35.878 262 138 11 149 384 196 453 2.13e-34 133
Msa0813720 MtrunA17_Chr5g0431391 44.654 159 45 4 1 149 32 157 2.60e-34 127
Msa0813720 MtrunA17_Chr7g0218831 27.740 447 251 14 10 400 6 436 3.29e-34 132
Msa0813720 MtrunA17_Chr6g0462551 27.527 465 249 18 16 402 8 462 3.52e-34 132
Msa0813720 MtrunA17_Chr8g0361411 25.862 464 272 15 1 403 1 453 3.64e-34 132
Msa0813720 MtrunA17_Chr7g0265151 24.845 483 278 12 10 409 9 489 4.62e-34 132
Msa0813720 MtrunA17_Chr5g0419771 25.558 493 272 11 1 404 27 513 5.24e-34 132
Msa0813720 MtrunA17_Chr1g0161351 25.720 486 262 12 1 403 28 497 6.13e-34 132
Msa0813720 MtrunA17_Chr5g0419761 25.767 489 266 14 10 408 9 490 7.65e-34 132
Msa0813720 MtrunA17_Chr7g0232411 26.452 465 254 14 10 397 6 459 8.29e-34 131
Msa0813720 MtrunA17_Chr7g0243771 26.371 474 265 15 10 403 6 475 8.57e-34 131
Msa0813720 MtrunA17_Chr7g0275681 24.583 480 271 13 10 406 12 483 1.29e-33 131
Msa0813720 MtrunA17_Chr4g0011051 25.956 497 249 15 10 404 9 488 1.49e-33 131
Msa0813720 MtrunA17_Chr6g0462541 28.090 356 190 9 101 402 118 461 1.95e-33 130
Msa0813720 MtrunA17_Chr7g0265101 25.709 494 253 15 10 404 9 487 2.06e-33 130
Msa0813720 MtrunA17_Chr7g0243951 23.663 486 266 14 10 403 11 483 2.54e-33 130
Msa0813720 MtrunA17_Chr7g0265141 26.186 485 265 13 6 402 5 484 2.76e-33 130
Msa0813720 MtrunA17_Chr6g0454171 29.129 333 170 12 111 404 5 310 2.92e-33 127
Msa0813720 MtrunA17_Chr8g0366391 25.355 493 245 16 10 403 9 477 3.84e-33 130
Msa0813720 MtrunA17_Chr7g0232391 26.022 465 256 13 10 397 6 459 5.14e-33 129
Msa0813720 MtrunA17_Chr7g0243931 24.174 484 267 14 10 403 17 490 5.61e-33 129
Msa0813720 MtrunA17_Chr7g0235051 25.282 443 268 13 10 396 11 446 5.91e-33 129
Msa0813720 MtrunA17_Chr8g0370941 24.948 481 264 12 9 397 7 482 1.43e-32 128
Msa0813720 MtrunA17_Chr6g0462571 27.731 357 191 10 101 402 115 459 1.61e-32 128
Msa0813720 MtrunA17_Chr8g0347281 26.316 456 249 15 15 396 23 465 1.69e-32 128
Msa0813720 MtrunA17_Chr4g0050341 25.726 482 254 16 10 400 19 487 1.87e-32 128
Msa0813720 MtrunA17_Chr6g0462531 25.216 464 256 14 16 399 8 460 1.92e-32 127
Msa0813720 MtrunA17_Chr5g0429681 26.419 458 233 16 14 385 48 487 2.01e-32 128
Msa0813720 MtrunA17_Chr8g0339461 32.500 280 143 8 160 404 207 475 2.07e-32 127
Msa0813720 MtrunA17_Chr8g0382021 33.613 238 132 4 188 404 257 489 2.24e-32 127
Msa0813720 MtrunA17_Chr8g0339441 26.351 444 251 12 9 399 5 425 4.02e-32 126
Msa0813720 MtrunA17_Chr7g0243871 31.955 266 155 8 159 403 212 472 4.07e-32 127
Msa0813720 MtrunA17_Chr7g0249961 33.772 228 133 6 190 404 38 260 9.85e-32 121
Msa0813720 MtrunA17_Chr8g0336691 32.222 270 141 8 160 399 1118 1375 1.04e-31 128
Msa0813720 MtrunA17_Chr8g0336691 26.115 471 253 15 10 399 13 469 1.12e-29 122
Msa0813720 MtrunA17_Chr8g0336691 32.099 243 151 6 157 397 676 906 2.56e-29 120
Msa0813720 MtrunA17_Chr8g0335161 31.298 262 144 6 163 399 212 462 1.21e-31 125
Msa0813720 MtrunA17_Chr5g0393591 26.087 460 235 14 9 403 16 435 1.41e-31 125
Msa0813720 MtrunA17_Chr5g0442491 24.017 483 263 14 14 406 9 477 1.69e-31 125
Msa0813720 MtrunA17_Chr6g0454211 25.462 487 265 13 10 409 297 772 2.02e-31 127
Msa0813720 MtrunA17_Chr6g0454211 34.682 173 77 7 159 321 98 244 9.57e-20 91.7
Msa0813720 MtrunA17_Chr7g0218821 26.247 461 252 13 10 400 5 447 2.02e-31 124
Msa0813720 MtrunA17_Chr8g0335141 31.008 258 150 6 163 399 214 464 2.66e-31 124
Msa0813720 MtrunA17_Chr4g0066221 26.115 471 262 17 14 403 15 480 3.46e-31 124
Msa0813720 MtrunA17_Chr7g0218841 26.622 447 257 16 10 400 6 437 3.95e-31 123
Msa0813720 MtrunA17_Chr8g0347271 31.939 263 141 7 160 396 216 466 4.80e-31 124
Msa0813720 MtrunA17_Chr7g0232341 26.398 447 241 14 9 377 5 441 5.15e-31 124
Msa0813720 MtrunA17_Chr7g0232331 25.397 441 253 12 9 377 5 441 5.36e-31 123
Msa0813720 MtrunA17_Chr7g0265041 23.045 486 284 12 10 408 11 493 5.99e-31 124
Msa0813720 MtrunA17_Chr8g0336731 31.801 261 148 6 163 400 234 487 9.11e-31 123
Msa0813720 MtrunA17_Chr4g0044501 23.896 498 269 14 1 407 1 479 1.09e-30 123
Msa0813720 MtrunA17_Chr6g0454221 32.627 236 128 7 187 402 5 229 1.39e-30 119
Msa0813720 MtrunA17_Chr6g0462521 26.889 450 248 15 16 397 8 444 1.49e-30 122
Msa0813720 MtrunA17_Chr2g0307961 23.871 465 276 12 10 404 13 469 1.53e-30 122
Msa0813720 MtrunA17_Chr7g0232311 32.509 283 149 11 151 401 189 461 1.64e-30 122
Msa0813720 MtrunA17_Chr5g0442521 23.395 483 267 14 14 406 9 478 2.02e-30 122
Msa0813720 MtrunA17_Chr1g0153451 26.809 470 248 16 10 399 6 459 2.30e-30 122
Msa0813720 MtrunA17_Chr5g0412111 32.468 231 131 5 159 365 212 441 3.17e-30 121
Msa0813720 MtrunA17_Chr8g0339451 29.126 309 173 7 117 399 171 459 3.34e-30 121
Msa0813720 MtrunA17_Chr4g0066171 24.945 457 271 14 14 403 25 476 3.37e-30 121
Msa0813720 MtrunA17_Chr6g0454271 31.061 264 155 8 158 404 34 287 3.70e-30 118
Msa0813720 MtrunA17_Chr5g0442581 23.868 486 276 13 14 413 9 486 4.36e-30 122
Msa0813720 MtrunA17_Chr7g0243801 28.065 367 204 10 95 403 112 476 5.42e-30 121
Msa0813720 MtrunA17_Chr4g0044521 32.576 264 148 8 164 400 203 463 6.26e-30 120
Msa0813720 MtrunA17_Chr8g0336651 31.395 258 147 6 163 397 208 458 7.41e-30 122
Msa0813720 MtrunA17_Chr8g0336651 30.147 272 154 7 154 397 974 1237 5.97e-29 119
Msa0813720 MtrunA17_Chr8g0336651 32.547 212 125 5 187 397 574 768 6.99e-29 119
Msa0813720 MtrunA17_Chr4g0044511 25.155 485 252 13 10 403 40 504 1.03e-29 120
Msa0813720 MtrunA17_Chr8g0336741 33.208 265 137 9 163 399 215 467 1.51e-29 119
Msa0813720 MtrunA17_Chr8g0339601 31.599 269 147 8 160 399 66 326 1.73e-29 117
Msa0813720 MtrunA17_Chr5g0420801 23.441 465 272 14 7 400 4 455 2.29e-29 119
Msa0813720 MtrunA17_Chr4g0066281 23.504 468 286 13 1 403 6 466 2.48e-29 119
Msa0813720 MtrunA17_Chr4g0066201 24.622 463 266 17 14 403 22 474 3.25e-29 119
Msa0813720 MtrunA17_Chr5g0426401 33.969 262 142 10 159 400 57 307 3.62e-29 115
Msa0813720 MtrunA17_Chr7g0241781 25.290 431 254 18 1 384 1 410 3.82e-29 117
Msa0813720 MtrunA17_Chr7g0243781 23.800 479 285 14 1 403 1 475 4.83e-29 118
Msa0813720 MtrunA17_Chr6g0459311 23.861 461 266 13 14 399 17 467 5.72e-29 118
Msa0813720 MtrunA17_Chr8g0334851 30.370 270 142 8 155 392 203 458 6.42e-29 117
Msa0813720 MtrunA17_Chr8g0369341 25.527 474 261 16 7 400 4 465 8.93e-29 117
Msa0813720 MtrunA17_Chr2g0294931 24.255 470 273 13 14 403 15 481 1.17e-28 117
Msa0813720 MtrunA17_Chr8g0374971 24.752 404 242 9 59 403 80 480 1.18e-28 117
Msa0813720 MtrunA17_Chr4g0032331 25.163 461 255 15 14 405 12 451 1.47e-28 116
Msa0813720 MtrunA17_Chr4g0042931 31.321 265 139 8 157 379 201 464 1.85e-28 116
Msa0813720 MtrunA17_Chr6g0486251 28.077 260 154 6 163 399 211 460 2.00e-28 116
Msa0813720 MtrunA17_Chr6g0486201 28.077 260 154 6 163 399 211 460 2.00e-28 116
Msa0813720 MtrunA17_Chr4g0066151 24.353 464 271 15 14 403 22 479 2.16e-28 116
Msa0813720 MtrunA17_Chr5g0442511 25.325 462 258 14 17 409 56 499 2.28e-28 116
Msa0813720 MtrunA17_Chr6g0449931 24.070 457 267 11 10 392 6 456 2.83e-28 115
Msa0813720 MtrunA17_Chr3g0079711 37.097 186 90 5 239 400 3 185 3.36e-28 109
Msa0813720 MtrunA17_Chr4g0060511 23.188 483 276 17 10 403 11 487 3.85e-28 115
Msa0813720 MtrunA17_Chr8g0374901 26.385 379 216 10 83 403 105 478 4.04e-28 115
Msa0813720 MtrunA17_Chr5g0409591 30.385 260 141 7 157 379 207 463 4.21e-28 115
Msa0813720 MtrunA17_Chr8g0374941 30.435 230 134 5 199 403 1189 1417 6.36e-28 116
Msa0813720 MtrunA17_Chr8g0374941 25.000 364 206 10 83 385 569 926 5.53e-24 105
Msa0813720 MtrunA17_Chr8g0374941 23.060 451 266 17 14 386 15 462 4.63e-23 102
Msa0813720 MtrunA17_Chr8g0339631 27.698 278 170 6 145 399 195 464 7.36e-28 114
Msa0813720 MtrunA17_Chr6g0463851 23.368 475 272 14 14 403 15 482 8.85e-28 114
Msa0813720 MtrunA17_Chr5g0440421 27.198 364 197 8 79 378 105 464 9.06e-28 114
Msa0813720 MtrunA17_Chr7g0243861 23.984 492 280 16 1 403 1 487 9.33e-28 114
Msa0813720 MtrunA17_Chr7g0232401 24.348 460 262 14 10 392 6 456 9.67e-28 114
Msa0813720 MtrunA17_Chr7g0243851 23.767 446 274 14 10 403 11 442 1.40e-27 114
Msa0813720 MtrunA17_Chr5g0412101 25.407 492 250 18 1 400 1 467 1.57e-27 114
Msa0813720 MtrunA17_Chr8g0350881 28.114 281 170 7 154 403 201 480 1.66e-27 114
Msa0813720 MtrunA17_Chr4g0066261 25.949 474 260 15 14 403 15 481 3.24e-27 113
Msa0813720 MtrunA17_Chr6g0454251 24.808 391 204 10 10 313 7 394 3.50e-27 111
Msa0813720 MtrunA17_Chr5g0403641 24.736 473 268 14 10 413 59 512 3.91e-27 113
Msa0813720 MtrunA17_Chr2g0329111 28.571 266 152 8 150 389 206 459 3.93e-27 112
Msa0813720 MtrunA17_Chr8g0355221 23.739 476 269 15 14 403 19 486 4.47e-27 112
Msa0813720 MtrunA17_Chr7g0265111 31.925 213 124 3 213 405 306 517 1.23e-26 112
Msa0813720 MtrunA17_Chr4g0066131 25.054 463 263 16 14 400 17 471 1.29e-26 111
Msa0813720 MtrunA17_Chr1g0207881 25.245 408 260 11 10 403 8 384 1.54e-26 110
Msa0813720 MtrunA17_Chr8g0361371 25.373 469 256 16 14 400 11 467 1.86e-26 110
Msa0813720 MtrunA17_Chr8g0334861 25.773 388 214 12 68 392 76 452 2.01e-26 110
Msa0813720 MtrunA17_Chr4g0044481 26.862 376 227 10 9 338 26 399 2.61e-26 109
Msa0813720 MtrunA17_Chr5g0401851 30.515 272 151 8 164 403 218 483 3.01e-26 110
Msa0813720 MtrunA17_Chr1g0153461 30.660 212 115 5 213 399 4 208 3.34e-26 105
Msa0813720 MtrunA17_Chr2g0294921 24.313 473 269 15 14 403 164 630 4.08e-26 110
Msa0813720 MtrunA17_Chr7g0243711 32.547 212 121 6 212 403 107 316 1.80e-25 105
Msa0813720 MtrunA17_Chr8g0355011 26.471 306 184 8 97 380 45 331 2.29e-25 106
Msa0813720 MtrunA17_Chr8g0374931 24.000 475 268 15 14 403 15 481 3.25e-25 107
Msa0813720 MtrunA17_Chr7g0243761 23.491 464 259 17 10 385 11 466 4.23e-25 106
Msa0813720 MtrunA17_Chr7g0218311 24.204 471 269 14 14 403 20 483 4.58e-25 107
Msa0813720 MtrunA17_Chr6g0463861 23.820 466 274 15 14 404 15 474 6.02e-25 106
Msa0813720 MtrunA17_Chr7g0243611 27.599 279 157 8 106 342 2 277 6.89e-25 103
Msa0813720 MtrunA17_Chr5g0428081 25.000 476 260 16 14 403 15 479 7.17e-25 106
Msa0813720 MtrunA17_Chr5g0412131 29.368 269 144 8 159 400 217 466 1.01e-24 105
Msa0813720 MtrunA17_Chr6g0482061 29.070 258 155 7 157 393 219 469 1.14e-24 105
Msa0813720 MtrunA17_Chr1g0165701 30.451 266 155 9 164 403 222 483 1.36e-24 105
Msa0813720 MtrunA17_Chr5g0410941 23.958 480 258 17 14 403 27 489 1.49e-23 102
Msa0813720 MtrunA17_Chr7g0241801 23.568 454 285 16 1 412 1 434 8.11e-23 99.8
Msa0813720 MtrunA17_Chr2g0294941 27.881 269 163 7 148 386 95 362 9.27e-23 99.0
Msa0813720 MtrunA17_Chr5g0416741 27.820 266 163 7 164 403 221 483 9.57e-23 100
Msa0813720 MtrunA17_Chr8g0334831 24.545 440 226 14 14 362 10 434 1.11e-22 99.8
Msa0813720 MtrunA17_Chr6g0454231 30.469 256 132 8 157 404 2 219 1.24e-22 99.8
Msa0813720 MtrunA17_Chr6g0463891 28.269 283 168 9 158 410 216 493 2.18e-22 99.0
Msa0813720 MtrunA17_Chr8g0367221 26.379 417 207 19 10 343 798 1197 9.76e-22 98.2
Msa0813720 MtrunA17_Chr8g0367221 28.436 211 129 4 150 341 1478 1685 3.47e-20 93.6
Msa0813720 MtrunA17_Chr8g0367221 24.515 412 220 18 10 343 12 410 5.65e-20 92.8
Msa0813720 MtrunA17_Chr7g0243811 31.818 198 118 5 159 342 187 381 1.12e-21 95.9
Msa0813720 MtrunA17_Chr8g0336261 38.525 122 64 2 238 349 4 124 1.14e-21 90.5
Msa0813720 MtrunA17_Chr6g0454371 29.545 176 107 3 238 404 4 171 2.17e-21 90.9
Msa0813720 MtrunA17_Chr8g0336251 28.279 244 153 7 157 384 209 446 4.96e-21 94.7
Msa0813720 MtrunA17_Chr8g0336321 28.279 244 153 7 157 384 209 446 6.14e-21 94.7
Msa0813720 MtrunA17_Chr4g0029151 25.926 405 237 14 22 406 101 462 1.05e-20 94.0
Msa0813720 MtrunA17_Chr8g0337381 36.066 122 72 2 278 399 6 121 1.47e-20 87.0
Msa0813720 MtrunA17_Chr4g0072761 24.444 450 275 16 10 405 15 453 1.82e-20 93.2
Msa0813720 MtrunA17_Chr5g0427571 27.600 250 151 7 157 384 39 280 4.95e-20 90.1
Msa0813720 MtrunA17_Chr7g0232351 27.822 381 190 17 10 313 6 378 6.65e-20 90.9
Msa0813720 MtrunA17_Chr4g0029131 27.899 276 165 8 155 413 203 461 7.34e-20 92.0
Msa0813720 MtrunA17_Chr5g0448551 24.422 389 224 13 14 338 11 393 2.54e-19 89.7
Msa0813720 MtrunA17_Chr6g0464091 22.811 434 252 14 10 370 18 441 3.24e-19 89.4
Msa0813720 MtrunA17_Chr4g0069611 23.410 393 229 12 10 338 15 399 6.36e-19 88.6
Msa0813720 MtrunA17_Chr7g0243911 31.522 184 104 5 213 376 22 203 9.02e-19 84.7
Msa0813720 MtrunA17_Chr2g0278721 24.041 391 219 15 10 330 15 397 1.82e-18 88.2
Msa0813720 MtrunA17_Chr2g0278721 30.058 173 111 4 215 378 785 956 2.35e-15 78.6
Msa0813720 MtrunA17_Chr4g0066141 34.615 156 91 4 256 403 199 351 2.02e-18 86.3
Msa0813720 MtrunA17_Chr2g0302851 22.126 461 280 15 10 406 16 461 2.58e-18 86.7
Msa0813720 MtrunA17_Chr8g0357361 28.947 190 123 4 163 340 64 253 4.11e-18 84.0
Msa0813720 MtrunA17_Chr1g0196851 26.316 247 156 7 155 384 243 480 4.94e-18 85.9
Msa0813720 MtrunA17_Chr2g0319801 24.336 452 255 17 1 381 1 436 9.49e-18 85.1
Msa0813720 MtrunA17_Chr2g0319731 23.736 455 254 17 1 381 18 453 2.36e-17 84.0
Msa0813720 MtrunA17_Chr4g0039881 21.786 459 266 16 21 410 3 437 3.05e-17 83.2
Msa0813720 MtrunA17_Chr2g0278741 31.667 180 110 6 162 330 302 479 3.49e-17 83.6
Msa0813720 MtrunA17_Chr4g0072771 21.111 450 293 13 10 405 25 466 9.05e-17 82.0
Msa0813720 MtrunA17_Chr2g0283041 23.288 438 258 15 10 380 7 433 5.34e-16 79.7
Msa0813720 MtrunA17_Chr6g0466831 21.465 396 233 12 10 338 18 402 1.07e-15 78.6
Msa0813720 MtrunA17_Chr6g0466841 21.465 396 233 12 10 338 18 402 1.31e-15 78.6
Msa0813720 MtrunA17_Chr5g0416821 25.094 267 157 8 164 403 223 473 5.48e-15 76.6
Msa0813720 MtrunA17_Chr7g0231631 25.660 265 156 8 164 403 11 259 1.40e-14 73.6
Msa0813720 MtrunA17_Chr4g0040691 23.849 239 159 4 157 381 207 436 1.95e-14 74.7
Msa0813720 MtrunA17_Chr3g0092031 33.333 132 79 4 215 338 6 136 7.64e-14 70.1
Msa0813720 MtrunA17_Chr2g0319761 22.045 440 264 16 10 381 8 436 1.36e-13 72.4
Msa0813720 MtrunA17_Chr7g0243731 43.077 65 37 0 274 338 9 73 2.85e-13 65.1
Msa0813720 MtrunA17_Chr2g0319751 25.110 227 151 5 165 379 692 911 3.38e-12 68.6
Msa0813720 MtrunA17_Chr2g0319751 25.926 216 139 5 165 379 215 410 1.42e-11 66.6
Msa0813720 MtrunA17_Chr5g0426411 30.488 164 92 7 10 152 12 174 1.18e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0813720 AT2G30150.2 45.312 448 193 6 5 403 8 452 1.66e-137 401
Msa0813720 AT2G30140.2 46.000 450 191 7 2 403 5 450 1.35e-136 399
Msa0813720 AT2G30140.1 45.898 451 191 7 2 403 5 451 1.96e-136 399
Msa0813720 AT2G30150.1 45.558 439 187 6 14 403 1 436 4.94e-135 394
Msa0813720 AT2G31750.2 29.274 468 250 12 10 410 8 461 1.98e-54 188
Msa0813720 AT2G31750.1 29.437 462 245 12 10 404 8 455 2.81e-54 187
Msa0813720 AT1G05675.1 29.501 461 240 13 9 400 5 449 1.58e-52 182
Msa0813720 AT1G24100.1 30.444 473 235 16 2 400 3 455 3.35e-51 179
Msa0813720 AT1G05560.1 27.646 463 260 11 3 403 2 451 1.76e-50 177
Msa0813720 AT1G05560.2 27.646 463 260 11 3 403 52 501 3.27e-50 177
Msa0813720 AT1G05680.1 28.416 461 245 14 9 400 5 449 2.11e-49 174
Msa0813720 AT2G43840.2 28.976 459 244 13 9 403 6 446 1.32e-48 171
Msa0813720 AT2G31790.1 28.043 460 252 13 9 401 7 454 4.74e-48 170
Msa0813720 AT2G43840.1 28.758 459 245 13 9 403 6 446 9.47e-48 169
Msa0813720 AT3G21560.1 26.638 473 268 10 1 400 3 469 1.75e-47 169
Msa0813720 AT2G28080.1 28.059 474 237 14 14 405 22 473 5.94e-47 168
Msa0813720 AT2G23250.1 29.909 438 245 18 19 403 7 435 2.50e-46 165
Msa0813720 AT2G43820.1 29.490 451 252 15 9 403 6 446 1.23e-45 164
Msa0813720 AT4G15550.1 26.824 466 262 10 10 402 13 472 8.82e-45 162
Msa0813720 AT2G23260.1 28.540 459 266 14 1 403 1 453 1.84e-44 160
Msa0813720 AT5G14860.1 27.778 486 249 19 6 403 4 475 2.96e-44 160
Msa0813720 AT2G36970.1 24.124 485 271 10 1 403 1 470 1.66e-43 159
Msa0813720 AT1G22340.1 26.667 480 255 16 10 403 13 481 3.50e-43 157
Msa0813720 AT1G78270.1 28.233 464 230 13 10 385 13 461 3.02e-42 155
Msa0813720 AT4G15490.1 25.949 474 270 13 5 405 3 468 8.90e-42 154
Msa0813720 AT1G10400.1 28.043 460 257 15 10 399 7 462 1.40e-41 153
Msa0813720 AT4G15480.1 26.452 465 260 13 10 400 19 475 1.57e-41 153
Msa0813720 AT1G05530.1 26.696 457 265 13 10 403 5 454 3.35e-41 152
Msa0813720 AT1G22360.1 25.163 461 250 12 9 385 9 458 4.92e-41 152
Msa0813720 AT3G21790.1 27.235 481 251 14 14 404 8 479 2.87e-40 150
Msa0813720 AT4G15500.1 26.338 467 268 14 6 404 5 463 1.18e-39 148
Msa0813720 AT1G22380.1 26.596 470 244 17 10 388 13 472 2.62e-39 147
Msa0813720 AT1G22400.1 26.681 461 242 13 10 385 13 462 6.09e-39 146
Msa0813720 AT3G46660.1 27.079 469 261 12 1 405 6 457 6.25e-39 145
Msa0813720 AT2G16890.2 28.782 476 248 20 6 403 5 467 8.09e-39 145
Msa0813720 AT3G21780.1 26.271 472 265 14 14 408 8 473 1.40e-38 145
Msa0813720 AT5G59590.1 26.350 463 267 12 1 403 1 449 1.48e-38 144
Msa0813720 AT1G22360.2 24.078 461 243 12 9 385 9 446 9.10e-38 142
Msa0813720 AT2G36780.1 26.230 488 255 15 10 404 14 489 9.65e-38 143
Msa0813720 AT4G01070.1 24.838 463 264 14 10 397 8 461 9.85e-38 142
Msa0813720 AT3G46670.1 26.304 460 264 12 1 400 1 445 1.03e-37 142
Msa0813720 AT4G15280.2 24.370 476 266 15 14 404 40 506 4.38e-37 141
Msa0813720 AT4G15280.1 24.370 476 266 15 14 404 8 474 5.08e-37 140
Msa0813720 AT2G36800.1 25.151 497 266 12 2 404 4 488 1.50e-36 140
Msa0813720 AT5G59580.1 26.949 449 255 13 14 403 13 447 1.72e-36 139
Msa0813720 AT2G36750.1 25.667 487 258 13 10 404 10 484 2.86e-36 139
Msa0813720 AT2G16890.3 30.144 418 202 18 6 344 5 411 2.99e-36 137
Msa0813720 AT1G22370.2 25.658 456 247 14 10 385 13 456 5.12e-36 138
Msa0813720 AT5G03490.1 27.252 444 256 15 10 394 19 454 5.87e-36 137
Msa0813720 AT3G46720.1 26.879 439 255 11 14 400 13 437 1.86e-35 136
Msa0813720 AT5G38010.1 24.625 467 268 13 1 400 1 450 2.23e-35 135
Msa0813720 AT3G21760.1 25.510 490 258 14 14 408 8 485 3.37e-35 135
Msa0813720 AT3G46680.1 26.932 453 246 15 14 400 13 446 5.57e-35 134
Msa0813720 AT3G21800.1 24.224 483 267 14 14 408 9 480 1.65e-34 134
Msa0813720 AT5G38040.1 26.364 440 256 13 18 400 18 446 3.70e-34 132
Msa0813720 AT2G29740.1 27.044 477 241 17 14 400 12 471 8.15e-34 132
Msa0813720 AT2G36770.1 24.691 486 269 13 10 406 14 491 8.61e-34 132
Msa0813720 AT3G46700.1 26.096 456 253 12 14 406 13 447 1.47e-33 130
Msa0813720 AT4G14090.1 25.446 448 273 13 10 402 13 454 2.47e-33 130
Msa0813720 AT3G11340.1 25.942 451 258 14 14 405 13 446 3.50e-33 129
Msa0813720 AT3G53150.1 25.151 497 270 13 10 408 22 514 3.76e-33 130
Msa0813720 AT2G36790.1 25.820 488 257 16 10 404 13 488 4.09e-33 130
Msa0813720 AT3G53160.1 24.486 486 270 16 10 406 8 485 6.15e-33 129
Msa0813720 AT3G46690.1 26.949 449 251 15 14 400 13 446 1.05e-32 128
Msa0813720 AT3G46650.1 25.676 444 269 12 1 399 1 428 1.15e-32 128
Msa0813720 AT1G01420.2 24.359 468 259 16 10 397 11 463 1.29e-32 129
Msa0813720 AT2G36760.1 24.646 495 258 14 10 406 14 491 1.42e-32 129
Msa0813720 AT1G01420.1 24.359 468 259 16 10 397 8 460 1.55e-32 128
Msa0813720 AT4G34131.1 25.257 487 276 14 1 405 1 481 1.87e-32 128
Msa0813720 AT3G02100.1 26.739 460 252 16 10 400 13 456 2.29e-32 127
Msa0813720 AT2G15490.3 32.197 264 149 8 163 403 221 477 2.94e-32 127
Msa0813720 AT2G15480.1 32.046 259 156 6 163 403 224 480 4.65e-32 127
Msa0813720 AT1G73880.1 25.000 468 268 15 9 405 13 468 1.02e-31 126
Msa0813720 AT2G15490.1 31.086 267 151 7 163 403 221 480 1.13e-31 126
Msa0813720 AT3G55700.1 29.889 271 166 5 147 405 194 452 1.27e-31 125
Msa0813720 AT3G21750.1 24.580 476 260 13 14 404 8 469 1.27e-31 125
Msa0813720 AT4G15260.1 29.530 298 173 10 139 408 71 359 1.32e-31 124
Msa0813720 AT1G51210.1 24.510 408 243 11 10 361 20 418 1.76e-31 124
Msa0813720 AT2G29730.1 30.268 261 159 7 159 404 211 463 2.05e-31 125
Msa0813720 AT2G15480.2 30.337 267 160 6 163 403 224 490 2.77e-31 125
Msa0813720 AT1G01390.1 26.603 421 207 13 10 344 8 412 3.08e-31 124
Msa0813720 AT1G01390.2 26.603 421 207 13 10 344 25 429 3.82e-31 124
Msa0813720 AT2G29750.1 28.125 480 247 18 14 408 12 478 5.19e-31 124
Msa0813720 AT4G34138.1 23.800 479 271 16 10 404 11 479 6.66e-31 124
Msa0813720 AT1G07260.1 30.389 283 160 9 149 404 200 472 2.36e-30 122
Msa0813720 AT1G07250.1 31.698 265 149 9 160 403 219 472 4.29e-30 121
Msa0813720 AT2G29710.1 29.885 261 161 7 159 404 210 463 4.88e-30 121
Msa0813720 AT1G07240.1 29.779 272 161 7 155 404 213 476 6.47e-30 121
Msa0813720 AT5G05900.1 25.918 463 256 13 10 406 8 449 3.77e-29 118
Msa0813720 AT3G16520.3 31.939 263 152 8 155 400 204 456 9.84e-29 117
Msa0813720 AT5G26310.1 25.000 472 251 15 10 396 7 460 3.34e-28 116
Msa0813720 AT2G18570.1 28.571 259 153 5 163 396 208 459 4.11e-28 115
Msa0813720 AT4G36770.1 30.435 230 116 6 185 386 233 446 8.18e-28 114
Msa0813720 AT5G65550.1 25.183 409 219 13 10 343 9 405 1.67e-27 114
Msa0813720 AT3G55710.1 29.070 258 159 5 163 405 208 456 2.49e-27 113
Msa0813720 AT3G16520.1 34.375 224 125 7 155 361 204 422 3.05e-27 113
Msa0813720 AT3G16520.2 34.375 224 125 7 155 361 204 422 3.29e-27 113
Msa0813720 AT3G50740.1 24.641 487 259 16 10 406 7 475 3.65e-27 113
Msa0813720 AT5G05860.1 25.164 457 263 13 10 404 9 448 6.62e-27 112
Msa0813720 AT2G18560.1 29.344 259 151 6 163 396 118 369 1.01e-26 110
Msa0813720 AT4G34135.1 30.000 260 162 5 159 400 221 478 1.16e-26 112
Msa0813720 AT5G05880.1 24.009 454 272 8 10 403 8 448 1.66e-26 111
Msa0813720 AT5G05890.1 23.516 455 271 9 10 400 8 449 2.15e-26 110
Msa0813720 AT1G06000.1 24.609 447 279 15 1 403 1 433 3.80e-26 109
Msa0813720 AT2G26480.1 24.242 462 270 13 10 409 8 451 7.31e-26 109
Msa0813720 AT5G66690.1 25.106 470 253 16 10 396 7 460 2.86e-25 107
Msa0813720 AT5G05870.1 23.707 464 269 11 9 403 7 454 3.04e-25 107
Msa0813720 AT5G37950.2 28.053 303 165 10 59 313 40 337 2.39e-24 103
Msa0813720 AT5G37950.1 28.679 265 134 9 99 313 84 343 6.60e-24 102
Msa0813720 AT5G12890.1 28.626 262 154 7 163 400 226 478 2.52e-23 102
Msa0813720 AT5G49690.1 24.945 457 239 15 10 388 10 440 4.81e-22 98.2
Msa0813720 AT1G22370.1 27.236 246 150 7 159 385 51 286 5.08e-22 96.3
Msa0813720 AT3G22250.1 26.623 462 240 18 14 397 12 452 1.30e-21 97.1
Msa0813720 AT5G17050.1 21.336 464 292 12 3 404 5 457 8.18e-21 94.7
Msa0813720 AT5G53990.1 23.434 431 254 16 10 381 6 419 1.66e-19 90.5
Msa0813720 AT5G17040.2 23.547 344 202 11 74 404 43 338 1.53e-16 80.9
Msa0813720 AT5G17040.1 23.938 259 168 7 159 404 198 440 1.79e-16 81.3
Msa0813720 AT1G64910.1 26.009 223 147 6 170 381 204 419 3.55e-16 80.5
Msa0813720 AT1G30530.1 19.570 465 293 12 3 404 5 451 6.86e-16 79.7
Msa0813720 AT4G01070.2 24.092 303 172 10 10 259 8 305 3.09e-15 77.0
Msa0813720 AT2G22590.1 26.415 265 167 9 157 406 218 469 3.57e-15 77.4
Msa0813720 AT5G17030.1 21.019 471 284 16 3 404 5 456 3.81e-15 77.4
Msa0813720 AT5G54010.1 22.737 453 270 18 10 400 6 440 6.09e-15 76.6
Msa0813720 AT4G27570.1 22.318 466 279 17 10 412 7 452 7.63e-15 76.6
Msa0813720 AT4G27560.1 22.098 448 270 16 10 394 7 438 7.71e-14 73.6
Msa0813720 AT1G64920.1 21.940 433 260 18 10 380 6 422 9.32e-14 73.2
Msa0813720 AT1G50580.1 23.361 244 171 4 167 399 200 438 3.33e-12 68.2
Msa0813720 AT3G29630.1 23.874 222 154 5 170 380 204 421 5.85e-12 67.4
Msa0813720 AT2G22930.1 21.018 452 279 17 10 403 6 437 8.85e-12 67.0
Msa0813720 AT3G29630.2 22.084 403 269 14 10 380 6 395 1.59e-11 66.2

Find 94 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAAGGAAGGTGTTATTTC+TGG 0.162724 5_3:+44744187 Msa0813720:CDS
AATGGTTGGTCCAAATTTAT+TGG 0.182855 5_3:-44744229 None:intergenic
ATTCTTCTGTTGGTGGATTT+TGG 0.192409 5_3:+44744143 Msa0813720:CDS
AGATGTTAAGGGAGATATTT+TGG 0.207711 5_3:+44744303 Msa0813720:CDS
GTGACCTTACAAGGGATATT+AGG 0.211375 5_3:+44744377 Msa0813720:CDS
AAAGTTGGTGTGTGAATTTA+TGG 0.216402 5_3:+44744345 Msa0813720:CDS
ACTATCATCTTACTATTAAA+TGG 0.227718 5_3:-44744247 None:intergenic
AACAAGGATGTTATTGTTCT+TGG 0.234090 5_3:-44741666 None:intergenic
CTATTTGTTGTGTTTGGTTT+AGG 0.257722 5_3:-44743893 None:intergenic
CCCTTACCAATTTACACTAT+TGG 0.262639 5_3:+44743833 Msa0813720:CDS
CACTACCCTGTGCGAAATTC+AGG 0.263011 5_3:+44742001 Msa0813720:CDS
GAGAGTGAAGGAAGATGTTA+AGG 0.271637 5_3:+44744291 Msa0813720:CDS
AAGCTGATGTTGTCGGGTTT+TGG 0.282585 5_3:-44741734 None:intergenic
GGGTTGATGTGGTCTCTTGC+AGG 0.282747 5_3:-44741614 None:intergenic
AAAGATGGAAGAACCCTTTA+AGG 0.293468 5_3:+44741808 Msa0813720:CDS
TCTCTTACACCACCATCTTT+TGG 0.293493 5_3:+44741967 Msa0813720:CDS
ATATTCCGGTAGCGTCGTTT+TGG 0.312238 5_3:+44741918 Msa0813720:CDS
TAGGTTAAGTAGCTCCTTAA+AGG 0.313254 5_3:-44741822 None:intergenic
GTAGGACCAATAGTGTAAAT+TGG 0.345043 5_3:-44743839 None:intergenic
ATAGTTGAGGATTTGAAGAT+TGG 0.347421 5_3:+44744265 Msa0813720:CDS
TATATGATACTATGTTGTAT+TGG 0.359324 5_3:+44741870 Msa0813720:CDS
ATGTAGCTATTTGTTGTGTT+TGG 0.371615 5_3:-44743899 None:intergenic
CGTCTTTGAAAGGATTTCAA+TGG 0.373988 5_3:+44743729 Msa0813720:intron
AGTTCTGAAGGAACGACGTT+GGG 0.379676 5_3:-44741767 None:intergenic
TTTCCCTAATATCCCTTGTA+AGG 0.381935 5_3:-44744381 None:intergenic
TGACCTTACAAGGGATATTA+GGG 0.386233 5_3:+44744378 Msa0813720:CDS
ATATGATACTATGTTGTATT+GGG 0.387491 5_3:+44741871 Msa0813720:CDS
TTAATAAAGTAGGGTATTGT+AGG 0.394050 5_3:-44743857 None:intergenic
CAAAGGAAGGTGTTATTTCT+GGG 0.400581 5_3:+44744188 Msa0813720:CDS
AATGATTTGAATGCCTTCAT+TGG 0.402190 5_3:+44744463 Msa0813720:CDS
GAAATTTGAAATTGTAAAGT+TGG 0.423128 5_3:+44744330 Msa0813720:CDS
ACCAATAGTGTAAATTGGTA+AGG 0.426589 5_3:-44743834 None:intergenic
GAACGGAAGCTGATGTTGTC+GGG 0.427580 5_3:-44741740 None:intergenic
CGTTACTATGTCACCAATGA+AGG 0.434660 5_3:-44744476 None:intergenic
ATGTGGTCTCTTGCAGGGTA+AGG 0.450283 5_3:-44741608 None:intergenic
AGGTTAAGTAGCTCCTTAAA+GGG 0.450421 5_3:-44741821 None:intergenic
TGCGATCGCGATGACAAAGA+TGG 0.460875 5_3:+44741793 Msa0813720:CDS
CAAGGTTGAAAGAAATTTGT+GGG 0.469604 5_3:+44744071 Msa0813720:CDS
TTGAAGGAGGATTGTCAAGT+AGG 0.473537 5_3:-44741841 None:intergenic
AATGTGACAACACTCTCAAT+TGG 0.474430 5_3:-44744123 None:intergenic
AGAGTGAAGGAAGATGTTAA+GGG 0.476102 5_3:+44744292 Msa0813720:CDS
AATTTGTGGGCACATGGGAT+TGG 0.477446 5_3:+44744084 Msa0813720:CDS
CACAGTACACACATGCTTGA+AGG 0.478996 5_3:+44744506 Msa0813720:CDS
TGGAAATCGAAGGAATATTC+CGG 0.485560 5_3:+44741904 Msa0813720:CDS
TTGTCACATTCTTCTGTTGG+TGG 0.486010 5_3:+44744136 Msa0813720:CDS
GAAAGAAATTTGTGGGCACA+TGG 0.495955 5_3:+44744078 Msa0813720:CDS
AGTGTGTGGTTGAAGGAAGT+TGG 0.498359 5_3:-44741578 None:intergenic
AAGATATGTGGTGATGCAAT+TGG 0.512128 5_3:+44744421 Msa0813720:CDS
GAAGATTGGGTTGAGAGTGA+AGG 0.515549 5_3:+44744279 Msa0813720:CDS
TCATCTTACTATTAAATGGT+TGG 0.515586 5_3:-44744243 None:intergenic
TGTTTACCTGAATTTCGCAC+AGG 0.516434 5_3:-44742007 None:intergenic
GAGCTTGCATAGGTTCATCA+TGG 0.517698 5_3:-44741636 None:intergenic
ACAAGGTTGAAAGAAATTTG+TGG 0.523744 5_3:+44744070 Msa0813720:CDS
GTGTTGTCACATTCTTCTGT+TGG 0.525846 5_3:+44744133 Msa0813720:CDS
ATTGTCCAAAACGACGCTAC+CGG 0.527945 5_3:-44741923 None:intergenic
CATTTGTTGTCAGTGAGGAA+TGG 0.534161 5_3:+44741690 Msa0813720:CDS
CGAACGGAAGCTGATGTTGT+CGG 0.535022 5_3:-44741741 None:intergenic
GTCTCTTGCAGGGTAAGGCA+TGG 0.536709 5_3:-44741603 None:intergenic
TAGTTGAGGATTTGAAGATT+GGG 0.537057 5_3:+44744266 Msa0813720:CDS
AGCTTGCATAGGTTCATCAT+GGG 0.540011 5_3:-44741635 None:intergenic
TGGCTTGATTCACAACCCAT+TGG 0.545647 5_3:+44743926 Msa0813720:CDS
CATGGCTAGTGTGTGGTTGA+AGG 0.548929 5_3:-44741585 None:intergenic
GGTTCATCATGGGGTTGATG+TGG 0.550622 5_3:-44741625 None:intergenic
GTATCATATATAATGATTGA+AGG 0.554740 5_3:-44741857 None:intergenic
TATGTAAAGAACAGAACCAA+TGG 0.556286 5_3:-44743942 None:intergenic
ATGTAAAGAACAGAACCAAT+GGG 0.557405 5_3:-44743941 None:intergenic
TAATAGTAAGATGATAGTTG+AGG 0.559789 5_3:+44744252 Msa0813720:CDS
TTGTATTGGGCTGTTGTCGT+TGG 0.563727 5_3:+44741884 Msa0813720:CDS
CACTGACAACAAATGTAACA+AGG 0.567368 5_3:-44741682 None:intergenic
TGGAGACAAGGAGCTTGCAT+AGG 0.568649 5_3:-44741646 None:intergenic
CCAATAGTGTAAATTGGTAA+GGG 0.569252 5_3:-44743833 None:intergenic
GGTTGATGTGGTCTCTTGCA+GGG 0.572282 5_3:-44741613 None:intergenic
GGTGATGCAATTGGCAATGG+TGG 0.574139 5_3:+44744430 Msa0813720:CDS
GGTTGGAATTCTACAAAGGA+AGG 0.579250 5_3:+44744175 Msa0813720:CDS
TGTTATTGTTCTTGGAGACA+AGG 0.586183 5_3:-44741658 None:intergenic
TAGCTCGTGGAGAAGCTACA+AGG 0.590823 5_3:+44744053 Msa0813720:CDS
GCGATCGCAATGAGTTCTGA+AGG 0.596745 5_3:-44741779 None:intergenic
GTGATGCAATTGGCAATGGT+GGG 0.603212 5_3:+44744431 Msa0813720:CDS
GAACGACGTTGGGGATCGAA+CGG 0.607662 5_3:-44741757 None:intergenic
CAACAAATAGCTACATTGAG+TGG 0.621116 5_3:+44743906 Msa0813720:CDS
GTGTGGTTGAAGGAAGTTGG+TGG 0.621647 5_3:-44741575 None:intergenic
TGTTACATTTGTTGTCAGTG+AGG 0.625066 5_3:+44741685 Msa0813720:CDS
AAAGAAATTTGTGGGCACAT+GGG 0.625283 5_3:+44744079 Msa0813720:CDS
AAAGGAAGGTGTTATTTCTG+GGG 0.633247 5_3:+44744189 Msa0813720:CDS
TTGTGGTTGGAATTCTACAA+AGG 0.634417 5_3:+44744171 Msa0813720:CDS
TCATATATAATGATTGAAGG+AGG 0.636319 5_3:-44741854 None:intergenic
TGTGGTGATGCAATTGGCAA+TGG 0.647878 5_3:+44744427 Msa0813720:CDS
GAGTTCTGAAGGAACGACGT+TGG 0.652005 5_3:-44741768 None:intergenic
GTTCTGAAGGAACGACGTTG+GGG 0.652924 5_3:-44741766 None:intergenic
TCTGTTCTTTACATAGCACA+AGG 0.659909 5_3:+44743950 Msa0813720:CDS
CTGTTGTCGTTGGAAATCGA+AGG 0.660156 5_3:+44741894 Msa0813720:CDS
GCTTGCATAGGTTCATCATG+GGG 0.680461 5_3:-44741634 None:intergenic
GTTTACCTGAATTTCGCACA+GGG 0.680898 5_3:-44742006 None:intergenic
GGTAAGGCATGGCTAGTGTG+TGG 0.684607 5_3:-44741592 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATGCAAAATAAATAA+GGG - chr5_3:44743060-44743079 None:intergenic 10.0%
!! AAAAAAATGCAAAATAAATA+AGG - chr5_3:44743061-44743080 None:intergenic 10.0%
!! TAAAATAATATCAATAAGTT+TGG - chr5_3:44743470-44743489 None:intergenic 10.0%
!!! TTTTTAAGATTAATAAAGTA+GGG - chr5_3:44743869-44743888 None:intergenic 10.0%
!!! AATTTTTTTTGGTAACAAAA+GGG - chr5_3:44742775-44742794 None:intergenic 15.0%
!!! AATCGATTTAGAATTTTTTT+TGG - chr5_3:44742786-44742805 None:intergenic 15.0%
!!! GACAAATTATTTTTTCAAAA+GGG - chr5_3:44742978-44742997 None:intergenic 15.0%
!!! TTATTTTTTGTCTATAATTG+TGG - chr5_3:44743439-44743458 None:intergenic 15.0%
!! GTTAACAGTAATTTAAATAA+TGG - chr5_3:44743569-44743588 None:intergenic 15.0%
!!! GTTTTTAAGATTAATAAAGT+AGG - chr5_3:44743870-44743889 None:intergenic 15.0%
!! TTTATTGGAAAAGTTAAAAA+AGG - chr5_3:44744217-44744236 None:intergenic 15.0%
!!! TTTAACTTTTCCAATAAATT+TGG + chr5_3:44744219-44744238 Msa0813720:CDS 15.0%
!! GTATCATATATAATGATTGA+AGG - chr5_3:44741860-44741879 None:intergenic 20.0%
!! TATATGATACTATGTTGTAT+TGG + chr5_3:44741870-44741889 Msa0813720:CDS 20.0%
!! ATATGATACTATGTTGTATT+GGG + chr5_3:44741871-44741890 Msa0813720:CDS 20.0%
!!! ATGTTAATTTGCTTCTAAAT+CGG - chr5_3:44742161-44742180 None:intergenic 20.0%
!!! GAATTTTTTTTGGTAACAAA+AGG - chr5_3:44742776-44742795 None:intergenic 20.0%
!!! TTGTTAATTTGCTTCTAAAT+CGG - chr5_3:44742822-44742841 None:intergenic 20.0%
!!! GGACAAATTATTTTTTCAAA+AGG - chr5_3:44742979-44742998 None:intergenic 20.0%
!! AAAGAAGTAATTAATGTACT+TGG - chr5_3:44743028-44743047 None:intergenic 20.0%
!! TATTTAATGTTCACATCATA+CGG - chr5_3:44743276-44743295 None:intergenic 20.0%
!!! CATTAAATAGAAATGCATTT+TGG + chr5_3:44743287-44743306 Msa0813720:intron 20.0%
!! TGTTAGTATGTTAATTGTTA+TGG - chr5_3:44743344-44743363 None:intergenic 20.0%
!!! AAAGCAATGTTAGATTTTTA+TGG + chr5_3:44744029-44744048 Msa0813720:CDS 20.0%
!!! AAGCAATGTTAGATTTTTAT+GGG + chr5_3:44744030-44744049 Msa0813720:CDS 20.0%
!! ACTATCATCTTACTATTAAA+TGG - chr5_3:44744250-44744269 None:intergenic 20.0%
!!! GAAATTTGAAATTGTAAAGT+TGG + chr5_3:44744330-44744349 Msa0813720:CDS 20.0%
! TCATATATAATGATTGAAGG+AGG - chr5_3:44741857-44741876 None:intergenic 25.0%
!!! ATATGTTCATTGCTATTTGT+TGG - chr5_3:44742036-44742055 None:intergenic 25.0%
! ATTTAACATCGAATATGTAG+CGG + chr5_3:44742092-44742111 Msa0813720:intron 25.0%
! TTGAATGTTCATCACAAATA+TGG + chr5_3:44742500-44742519 Msa0813720:intron 25.0%
! CAAATATGGATATTTAGTCA+TGG + chr5_3:44742514-44742533 Msa0813720:intron 25.0%
!! TCAAAAGGGTCTTATAATTA+GGG - chr5_3:44742964-44742983 None:intergenic 25.0%
!! TTCAAAAGGGTCTTATAATT+AGG - chr5_3:44742965-44742984 None:intergenic 25.0%
! ATGTACTTGGAAATATCAAA+GGG - chr5_3:44743015-44743034 None:intergenic 25.0%
! AATGTACTTGGAAATATCAA+AGG - chr5_3:44743016-44743035 None:intergenic 25.0%
!! CAAAATAAATAAGGGTATGT+TGG - chr5_3:44743052-44743071 None:intergenic 25.0%
! TAAATTAACTCTCTCTCTTA+AGG + chr5_3:44743112-44743131 Msa0813720:intron 25.0%
! CGGATAATGTATGATAAATA+TGG - chr5_3:44743256-44743275 None:intergenic 25.0%
!! TAAATAGAAATGCATTTTGG+AGG + chr5_3:44743290-44743309 Msa0813720:intron 25.0%
!! AAATAGAAATGCATTTTGGA+GGG + chr5_3:44743291-44743310 Msa0813720:intron 25.0%
!! CGTTCATTATTAAGATGTTT+TGG + chr5_3:44743518-44743537 Msa0813720:intron 25.0%
!!! TTAATAAAGTAGGGTATTGT+AGG - chr5_3:44743860-44743879 None:intergenic 25.0%
! TCATCTTACTATTAAATGGT+TGG - chr5_3:44744246-44744265 None:intergenic 25.0%
! TAATAGTAAGATGATAGTTG+AGG + chr5_3:44744252-44744271 Msa0813720:CDS 25.0%
! AGAAAGTTCAAAAAGATATG+TGG + chr5_3:44744409-44744428 Msa0813720:CDS 25.0%
AACAAGGATGTTATTGTTCT+TGG - chr5_3:44741669-44741688 None:intergenic 30.0%
ATAAACCTAAAATCTCAGCA+TGG - chr5_3:44742388-44742407 None:intergenic 30.0%
!!! GAGATTTTAGGTTTATACCA+TGG + chr5_3:44742392-44742411 Msa0813720:intron 30.0%
! GATGAACATTCAAATCCTTT+TGG - chr5_3:44742493-44742512 None:intergenic 30.0%
!!! AGCTGATTTTCTAGCTAAAA+AGG + chr5_3:44742607-44742626 Msa0813720:intron 30.0%
!!! GCTGATTTTCTAGCTAAAAA+GGG + chr5_3:44742608-44742627 Msa0813720:intron 30.0%
TATACTCTTAGTAGATGTCA+TGG + chr5_3:44742688-44742707 Msa0813720:intron 30.0%
ATACTCTTAGTAGATGTCAT+GGG + chr5_3:44742689-44742708 Msa0813720:intron 30.0%
! TCAAAGGGGTCTTATAAAAA+GGG - chr5_3:44743000-44743019 None:intergenic 30.0%
! ATCAAAGGGGTCTTATAAAA+AGG - chr5_3:44743001-44743020 None:intergenic 30.0%
TGTACTTGGAAATATCAAAG+GGG - chr5_3:44743014-44743033 None:intergenic 30.0%
! TTTCTTAATCTCCGCAATTT+TGG + chr5_3:44743188-44743207 Msa0813720:intron 30.0%
GCAAAAGACTCCTATATTTA+GGG + chr5_3:44743210-44743229 Msa0813720:intron 30.0%
!!! GTTTCGATTTTAAGGTATCA+AGG - chr5_3:44743811-44743830 None:intergenic 30.0%
CCAATAGTGTAAATTGGTAA+GGG - chr5_3:44743836-44743855 None:intergenic 30.0%
ACCAATAGTGTAAATTGGTA+AGG - chr5_3:44743837-44743856 None:intergenic 30.0%
!! CTATTTGTTGTGTTTGGTTT+AGG - chr5_3:44743896-44743915 None:intergenic 30.0%
!! ATGTAGCTATTTGTTGTGTT+TGG - chr5_3:44743902-44743921 None:intergenic 30.0%
ATGTAAAGAACAGAACCAAT+GGG - chr5_3:44743944-44743963 None:intergenic 30.0%
TATGTAAAGAACAGAACCAA+TGG - chr5_3:44743945-44743964 None:intergenic 30.0%
ACAAGGTTGAAAGAAATTTG+TGG + chr5_3:44744070-44744089 Msa0813720:CDS 30.0%
CAAGGTTGAAAGAAATTTGT+GGG + chr5_3:44744071-44744090 Msa0813720:CDS 30.0%
! AATGGTTGGTCCAAATTTAT+TGG - chr5_3:44744232-44744251 None:intergenic 30.0%
ATAGTTGAGGATTTGAAGAT+TGG + chr5_3:44744265-44744284 Msa0813720:CDS 30.0%
TAGTTGAGGATTTGAAGATT+GGG + chr5_3:44744266-44744285 Msa0813720:CDS 30.0%
! AGATGTTAAGGGAGATATTT+TGG + chr5_3:44744303-44744322 Msa0813720:CDS 30.0%
!! AAAGTTGGTGTGTGAATTTA+TGG + chr5_3:44744345-44744364 Msa0813720:CDS 30.0%
!!! ATTTTGATAGTGACCTTACA+AGG + chr5_3:44744368-44744387 Msa0813720:CDS 30.0%
!!! TTTTGATAGTGACCTTACAA+GGG + chr5_3:44744369-44744388 Msa0813720:CDS 30.0%
AATGATTTGAATGCCTTCAT+TGG + chr5_3:44744463-44744482 Msa0813720:CDS 30.0%
TGTTATTGTTCTTGGAGACA+AGG - chr5_3:44741661-44741680 None:intergenic 35.0%
CACTGACAACAAATGTAACA+AGG - chr5_3:44741685-44741704 None:intergenic 35.0%
!! TGTTACATTTGTTGTCAGTG+AGG + chr5_3:44741685-44741704 Msa0813720:CDS 35.0%
AAAGATGGAAGAACCCTTTA+AGG + chr5_3:44741808-44741827 Msa0813720:CDS 35.0%
AGGTTAAGTAGCTCCTTAAA+GGG - chr5_3:44741824-44741843 None:intergenic 35.0%
TAGGTTAAGTAGCTCCTTAA+AGG - chr5_3:44741825-44741844 None:intergenic 35.0%
TGGAAATCGAAGGAATATTC+CGG + chr5_3:44741904-44741923 Msa0813720:CDS 35.0%
! CATTTTGTTCCAAAAGATGG+TGG - chr5_3:44741979-44741998 None:intergenic 35.0%
!!! CACCATCTTTTGGAACAAAA+TGG + chr5_3:44741977-44741996 Msa0813720:CDS 35.0%
! GACCATTTTGTTCCAAAAGA+TGG - chr5_3:44741982-44742001 None:intergenic 35.0%
TACAGGTTGTTGTACAATCA+AGG - chr5_3:44742201-44742220 None:intergenic 35.0%
TCAGTAGCTCTTAATGTTGA+TGG + chr5_3:44742254-44742273 Msa0813720:intron 35.0%
TGTATTCCTTGATTCCAACT+TGG + chr5_3:44742280-44742299 Msa0813720:intron 35.0%
GTATTCCTTGATTCCAACTT+GGG + chr5_3:44742281-44742300 Msa0813720:intron 35.0%
! TCCTTTTTGCATGGTTTCTT+TGG + chr5_3:44742338-44742357 Msa0813720:intron 35.0%
! CCTTTTTGCATGGTTTCTTT+GGG + chr5_3:44742339-44742358 Msa0813720:intron 35.0%
! TTGAAGTTGTGTTGGGATTT+TGG + chr5_3:44742416-44742435 Msa0813720:intron 35.0%
! GGATTTTGGATTTAAGCATG+TGG + chr5_3:44742430-44742449 Msa0813720:intron 35.0%
! CATTCAAATCCTTTTGGATG+AGG - chr5_3:44742487-44742506 None:intergenic 35.0%
TTTACGACATACTTTGCATG+AGG + chr5_3:44742574-44742593 Msa0813720:intron 35.0%
TTACGACATACTTTGCATGA+GGG + chr5_3:44742575-44742594 Msa0813720:intron 35.0%
! AAGAGTATAGAGGACATATC+AGG - chr5_3:44742677-44742696 None:intergenic 35.0%
! GACATCTACTAAGAGTATAG+AGG - chr5_3:44742687-44742706 None:intergenic 35.0%
CCTAAAAAAGACCCATACTA+GGG - chr5_3:44742731-44742750 None:intergenic 35.0%
ACCTAAAAAAGACCCATACT+AGG - chr5_3:44742732-44742751 None:intergenic 35.0%
! AAGGGTCTTATAATTAGGGA+CGG - chr5_3:44742960-44742979 None:intergenic 35.0%
ATTGCGGAGATTAAGAAAGT+TGG - chr5_3:44743186-44743205 None:intergenic 35.0%
GGCAAAAGACTCCTATATTT+AGG + chr5_3:44743209-44743228 Msa0813720:intron 35.0%
AAGACTCCTATATTTAGGGA+CGG + chr5_3:44743214-44743233 Msa0813720:intron 35.0%
TAGTGATGCAATGCAGAAAA+TGG + chr5_3:44743666-44743685 Msa0813720:intron 35.0%
! CGTCTTTGAAAGGATTTCAA+TGG + chr5_3:44743729-44743748 Msa0813720:intron 35.0%
! TAAGGGCAGTTTCGATTTTA+AGG - chr5_3:44743819-44743838 None:intergenic 35.0%
CCCTTACCAATTTACACTAT+TGG + chr5_3:44743833-44743852 Msa0813720:CDS 35.0%
GTAGGACCAATAGTGTAAAT+TGG - chr5_3:44743842-44743861 None:intergenic 35.0%
CAACAAATAGCTACATTGAG+TGG + chr5_3:44743906-44743925 Msa0813720:CDS 35.0%
TCTGTTCTTTACATAGCACA+AGG + chr5_3:44743950-44743969 Msa0813720:CDS 35.0%
AAAGAAATTTGTGGGCACAT+GGG + chr5_3:44744079-44744098 Msa0813720:CDS 35.0%
!!! ACATGGGATTGGTTTTAGAA+TGG + chr5_3:44744095-44744114 Msa0813720:CDS 35.0%
AATGTGACAACACTCTCAAT+TGG - chr5_3:44744126-44744145 None:intergenic 35.0%
!!! ATTCTTCTGTTGGTGGATTT+TGG + chr5_3:44744143-44744162 Msa0813720:CDS 35.0%
TTGTGGTTGGAATTCTACAA+AGG + chr5_3:44744171-44744190 Msa0813720:CDS 35.0%
!! ACAAAGGAAGGTGTTATTTC+TGG + chr5_3:44744187-44744206 Msa0813720:CDS 35.0%
!! CAAAGGAAGGTGTTATTTCT+GGG + chr5_3:44744188-44744207 Msa0813720:CDS 35.0%
!! AAAGGAAGGTGTTATTTCTG+GGG + chr5_3:44744189-44744208 Msa0813720:CDS 35.0%
AGAGTGAAGGAAGATGTTAA+GGG + chr5_3:44744292-44744311 Msa0813720:CDS 35.0%
TGACCTTACAAGGGATATTA+GGG + chr5_3:44744378-44744397 Msa0813720:CDS 35.0%
TTTCCCTAATATCCCTTGTA+AGG - chr5_3:44744384-44744403 None:intergenic 35.0%
! AAGATATGTGGTGATGCAAT+TGG + chr5_3:44744421-44744440 Msa0813720:CDS 35.0%
AGCTTGCATAGGTTCATCAT+GGG - chr5_3:44741638-44741657 None:intergenic 40.0%
!! CATTTGTTGTCAGTGAGGAA+TGG + chr5_3:44741690-44741709 Msa0813720:CDS 40.0%
TTGAAGGAGGATTGTCAAGT+AGG - chr5_3:44741844-44741863 None:intergenic 40.0%
! TCTCTTACACCACCATCTTT+TGG + chr5_3:44741967-44741986 Msa0813720:CDS 40.0%
GTTTACCTGAATTTCGCACA+GGG - chr5_3:44742009-44742028 None:intergenic 40.0%
TGTTTACCTGAATTTCGCAC+AGG - chr5_3:44742010-44742029 None:intergenic 40.0%
AGAGCTACTGAATCCATACT+AGG - chr5_3:44742245-44742264 None:intergenic 40.0%
!! GGTCTTATTCGTGATCATAC+AGG + chr5_3:44742314-44742333 Msa0813720:intron 40.0%
! CATACAGGTTCCTTTTTGCA+TGG + chr5_3:44742329-44742348 Msa0813720:intron 40.0%
CCCAAAGAAACCATGCAAAA+AGG - chr5_3:44742342-44742361 None:intergenic 40.0%
! ATCCTCCATGCTGAGATTTT+AGG + chr5_3:44742380-44742399 Msa0813720:intron 40.0%
AACCTAAAATCTCAGCATGG+AGG - chr5_3:44742385-44742404 None:intergenic 40.0%
! ACCATGGTTTGAAGTTGTGT+TGG + chr5_3:44742408-44742427 Msa0813720:intron 40.0%
! CCATGGTTTGAAGTTGTGTT+GGG + chr5_3:44742409-44742428 Msa0813720:intron 40.0%
TGTTGTTGACCTCATCCAAA+AGG + chr5_3:44742475-44742494 Msa0813720:intron 40.0%
AACACCTTCTTCGTAGAGAT+TGG + chr5_3:44742543-44742562 Msa0813720:intron 40.0%
ACACCTTCTTCGTAGAGATT+GGG + chr5_3:44742544-44742563 Msa0813720:intron 40.0%
TATAGAGGACATATCAGGAG+GGG - chr5_3:44742672-44742691 None:intergenic 40.0%
GTATAGAGGACATATCAGGA+GGG - chr5_3:44742673-44742692 None:intergenic 40.0%
AGTATAGAGGACATATCAGG+AGG - chr5_3:44742674-44742693 None:intergenic 40.0%
! AGTTTGTTCGACCCTAGTAT+GGG + chr5_3:44742717-44742736 Msa0813720:intron 40.0%
!!! CCCTAGTATGGGTCTTTTTT+AGG + chr5_3:44742728-44742747 Msa0813720:intron 40.0%
! GGAGTCTTTTGCCAAAATTG+CGG - chr5_3:44743202-44743221 None:intergenic 40.0%
!! AGAAATGCATTTTGGAGGGT+TGG + chr5_3:44743295-44743314 Msa0813720:intron 40.0%
!! GAAATGCATTTTGGAGGGTT+GGG + chr5_3:44743296-44743315 Msa0813720:intron 40.0%
! AGATTTTTATGGGTAGCTCG+TGG + chr5_3:44744040-44744059 Msa0813720:CDS 40.0%
GAAAGAAATTTGTGGGCACA+TGG + chr5_3:44744078-44744097 Msa0813720:CDS 40.0%
GTGTTGTCACATTCTTCTGT+TGG + chr5_3:44744133-44744152 Msa0813720:CDS 40.0%
TTGTCACATTCTTCTGTTGG+TGG + chr5_3:44744136-44744155 Msa0813720:CDS 40.0%
!! GATTTTGGTCACATTGTGGT+TGG + chr5_3:44744158-44744177 Msa0813720:CDS 40.0%
GGTTGGAATTCTACAAAGGA+AGG + chr5_3:44744175-44744194 Msa0813720:CDS 40.0%
GAGAGTGAAGGAAGATGTTA+AGG + chr5_3:44744291-44744310 Msa0813720:CDS 40.0%
GTGACCTTACAAGGGATATT+AGG + chr5_3:44744377-44744396 Msa0813720:CDS 40.0%
CGTTACTATGTCACCAATGA+AGG - chr5_3:44744479-44744498 None:intergenic 40.0%
AGTGTGTGGTTGAAGGAAGT+TGG - chr5_3:44741581-44741600 None:intergenic 45.0%
GCTTGCATAGGTTCATCATG+GGG - chr5_3:44741637-44741656 None:intergenic 45.0%
GAGCTTGCATAGGTTCATCA+TGG - chr5_3:44741639-44741658 None:intergenic 45.0%
!!! GATGTTGTCGGGTTTTGGTT+CGG - chr5_3:44741732-44741751 None:intergenic 45.0%
! AAGCTGATGTTGTCGGGTTT+TGG - chr5_3:44741737-44741756 None:intergenic 45.0%
!! AGTTCTGAAGGAACGACGTT+GGG - chr5_3:44741770-44741789 None:intergenic 45.0%
TTGTATTGGGCTGTTGTCGT+TGG + chr5_3:44741884-44741903 Msa0813720:CDS 45.0%
CTGTTGTCGTTGGAAATCGA+AGG + chr5_3:44741894-44741913 Msa0813720:CDS 45.0%
! ATATTCCGGTAGCGTCGTTT+TGG + chr5_3:44741918-44741937 Msa0813720:CDS 45.0%
ATTGTCCAAAACGACGCTAC+CGG - chr5_3:44741926-44741945 None:intergenic 45.0%
AACCTGTACGTATTGTCAGC+TGG + chr5_3:44742213-44742232 Msa0813720:intron 45.0%
TTCCTTGATTCCAACTTGGG+AGG + chr5_3:44742284-44742303 Msa0813720:intron 45.0%
! AACCTCCCAAGTTGGAATCA+AGG - chr5_3:44742289-44742308 None:intergenic 45.0%
! GATTCCAACTTGGGAGGTTT+TGG + chr5_3:44742290-44742309 Msa0813720:intron 45.0%
CCCAACACAACTTCAAACCA+TGG - chr5_3:44742412-44742431 None:intergenic 45.0%
!! GCTAAAAAGGGTGCTCTTAG+TGG + chr5_3:44742620-44742639 Msa0813720:intron 45.0%
! GAGTTTGTTCGACCCTAGTA+TGG + chr5_3:44742716-44742735 Msa0813720:intron 45.0%
! GGTCTTATAATTAGGGACGG+AGG - chr5_3:44742957-44742976 None:intergenic 45.0%
ACTCCTATATTTAGGGACGG+AGG + chr5_3:44743217-44743236 Msa0813720:intron 45.0%
CTACCTCCGTCCCTAAATAT+AGG - chr5_3:44743223-44743242 None:intergenic 45.0%
!! TTTTGGAGGGTTGGGTAGTA+AGG + chr5_3:44743304-44743323 Msa0813720:intron 45.0%
TTCCTCAACGCGTCTTTGAA+AGG + chr5_3:44743719-44743738 Msa0813720:intron 45.0%
ATCCTTTCAAAGACGCGTTG+AGG - chr5_3:44743724-44743743 None:intergenic 45.0%
TGGCTTGATTCACAACCCAT+TGG + chr5_3:44743926-44743945 Msa0813720:CDS 45.0%
AATTTGTGGGCACATGGGAT+TGG + chr5_3:44744084-44744103 Msa0813720:CDS 45.0%
!! GGTGGATTTTGGTCACATTG+TGG + chr5_3:44744154-44744173 Msa0813720:CDS 45.0%
!! GAAGATTGGGTTGAGAGTGA+AGG + chr5_3:44744279-44744298 Msa0813720:CDS 45.0%
! TGTGGTGATGCAATTGGCAA+TGG + chr5_3:44744427-44744446 Msa0813720:CDS 45.0%
GTGATGCAATTGGCAATGGT+GGG + chr5_3:44744431-44744450 Msa0813720:CDS 45.0%
!! TTCTATAATTTATTTATTTA+TGG + chr5_3:44742065-44742084 Msa0813720:intron 5.0%
!!! TTATTGATATTATTTTAAAT+TGG + chr5_3:44743473-44743492 Msa0813720:intron 5.0%
!!! TATTGATATTATTTTAAATT+GGG + chr5_3:44743474-44743493 Msa0813720:intron 5.0%
GTGTGGTTGAAGGAAGTTGG+TGG - chr5_3:44741578-44741597 None:intergenic 50.0%
CATGGCTAGTGTGTGGTTGA+AGG - chr5_3:44741588-44741607 None:intergenic 50.0%
ATGTGGTCTCTTGCAGGGTA+AGG - chr5_3:44741611-44741630 None:intergenic 50.0%
! GGTTGATGTGGTCTCTTGCA+GGG - chr5_3:44741616-44741635 None:intergenic 50.0%
!! GGTTCATCATGGGGTTGATG+TGG - chr5_3:44741628-44741647 None:intergenic 50.0%
TGGAGACAAGGAGCTTGCAT+AGG - chr5_3:44741649-44741668 None:intergenic 50.0%
GAACGGAAGCTGATGTTGTC+GGG - chr5_3:44741743-44741762 None:intergenic 50.0%
CGAACGGAAGCTGATGTTGT+CGG - chr5_3:44741744-44741763 None:intergenic 50.0%
!! GTTCTGAAGGAACGACGTTG+GGG - chr5_3:44741769-44741788 None:intergenic 50.0%
!! GAGTTCTGAAGGAACGACGT+TGG - chr5_3:44741771-44741790 None:intergenic 50.0%
! GCGATCGCAATGAGTTCTGA+AGG - chr5_3:44741782-44741801 None:intergenic 50.0%
TGCGATCGCGATGACAAAGA+TGG + chr5_3:44741793-44741812 Msa0813720:CDS 50.0%
CACTACCCTGTGCGAAATTC+AGG + chr5_3:44742001-44742020 Msa0813720:CDS 50.0%
TGCCAGCTGACAATACGTAC+AGG - chr5_3:44742218-44742237 None:intergenic 50.0%
!! TCCAACTTGGGAGGTTTTGG+CGG + chr5_3:44742293-44742312 Msa0813720:intron 50.0%
ATCTCAGCATGGAGGATGCA+AGG - chr5_3:44742377-44742396 None:intergenic 50.0%
CCACCCAATCTCTACGAAGA+AGG - chr5_3:44742550-44742569 None:intergenic 50.0%
CCTTCTTCGTAGAGATTGGG+TGG + chr5_3:44742547-44742566 Msa0813720:intron 50.0%
AGACGCGTTGAGGAAATTGC+AGG - chr5_3:44743714-44743733 None:intergenic 50.0%
TAGCTCGTGGAGAAGCTACA+AGG + chr5_3:44744053-44744072 Msa0813720:CDS 50.0%
GGTGATGCAATTGGCAATGG+TGG + chr5_3:44744430-44744449 Msa0813720:CDS 50.0%
GGTAAGGCATGGCTAGTGTG+TGG - chr5_3:44741595-44741614 None:intergenic 55.0%
GTCTCTTGCAGGGTAAGGCA+TGG - chr5_3:44741606-44741625 None:intergenic 55.0%
!! GGGTTGATGTGGTCTCTTGC+AGG - chr5_3:44741617-44741636 None:intergenic 55.0%
!!! GTTGTCGGGTTTTGGTTCGG+AGG - chr5_3:44741729-44741748 None:intergenic 55.0%
GAACGACGTTGGGGATCGAA+CGG - chr5_3:44741760-44741779 None:intergenic 55.0%
CAGCTGGCAACGACCTAGTA+TGG + chr5_3:44742229-44742248 Msa0813720:intron 55.0%
ACCGCCAAAACCTCCCAAGT+TGG - chr5_3:44742297-44742316 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 44741566 44744525 44741566 ID=Msa0813720;Name=Msa0813720
chr5_3 mRNA 44741566 44744525 44741566 ID=Msa0813720-mRNA-1;Parent=Msa0813720;Name=Msa0813720-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|1|1|2|0|413
chr5_3 exon 44741566 44742022 44741566 ID=Msa0813720-mRNA-1:exon:13780;Parent=Msa0813720-mRNA-1
chr5_3 exon 44743741 44744525 44743741 ID=Msa0813720-mRNA-1:exon:13781;Parent=Msa0813720-mRNA-1
chr5_3 CDS 44741566 44742022 44741566 ID=Msa0813720-mRNA-1:cds;Parent=Msa0813720-mRNA-1
chr5_3 CDS 44743741 44744525 44743741 ID=Msa0813720-mRNA-1:cds;Parent=Msa0813720-mRNA-1
Gene Sequence

>Msa0813720

ATGGAATCACCACCAACTTCCTTCAACCACACACTAGCCATGCCTTACCCTGCAAGAGACCACATCAACCCCATGATGAACCTATGCAAGCTCCTTGTCTCCAAGAACAATAACATCCTTGTTACATTTGTTGTCAGTGAGGAATGGTTAAGCTTCATCTCCTCCGAACCAAAACCCGACAACATCAGCTTCCGTTCGATCCCCAACGTCGTTCCTTCAGAACTCATTGCGATCGCGATGACAAAGATGGAAGAACCCTTTAAGGAGCTACTTAACCTACTTGACAATCCTCCTTCAATCATTATATATGATACTATGTTGTATTGGGCTGTTGTCGTTGGAAATCGAAGGAATATTCCGGTAGCGTCGTTTTGGACAATGTCTGCTTCGTTTTTCTCTGTTCTCTTACACCACCATCTTTTGGAACAAAATGGTCACTACCCTGTGCGAAATTCAGGATTTCAATGGATTCACAAAGCACAATATCTTCTATTCACTTCAATTTATGAGCTTGAATCTCAAGTCCTTGATACCTTAAAATCGAAACTGCCCTTACCAATTTACACTATTGGTCCTACAATACCCTACTTTATTAATCTTAAAAACAATCCTAAACCAAACACAACAAATAGCTACATTGAGTGGCTTGATTCACAACCCATTGGTTCTGTTCTTTACATAGCACAAGGTAGTTTTCTCTCAGCTTCAAATGAACAAATTAATGAGATTGCAAATGCTGTGCGTGAAAGCAATGTTAGATTTTTATGGGTAGCTCGTGGAGAAGCTACAAGGTTGAAAGAAATTTGTGGGCACATGGGATTGGTTTTAGAATGGTGTGACCAATTGAGAGTGTTGTCACATTCTTCTGTTGGTGGATTTTGGTCACATTGTGGTTGGAATTCTACAAAGGAAGGTGTTATTTCTGGGGTACCTTTTTTAACTTTTCCAATAAATTTGGACCAACCATTTAATAGTAAGATGATAGTTGAGGATTTGAAGATTGGGTTGAGAGTGAAGGAAGATGTTAAGGGAGATATTTTGGTGAAGAAATTTGAAATTGTAAAGTTGGTGTGTGAATTTATGGATTTTGATAGTGACCTTACAAGGGATATTAGGGAAAAAAGTAGAAAGTTCAAAAAGATATGTGGTGATGCAATTGGCAATGGTGGGTCTGCTGATAATGATTTGAATGCCTTCATTGGTGACATAGTAACGCATTGTTCACAGTACACACATGCTTGA
Protein sequence

>Msa0813720

MESPPTSFNHTLAMPYPARDHINPMMNLCKLLVSKNNNILVTFVVSEEWLSFISSEPKPDNISFRSIPNVVPSELIAIAMTKMEEPFKELLNLLDNPPSIIIYDTMLYWAVVVGNRRNIPVASFWTMSASFFSVLLHHHLLEQNGHYPVRNSGFQWIHKAQYLLFTSIYELESQVLDTLKSKLPLPIYTIGPTIPYFINLKNNPKPNTTNSYIEWLDSQPIGSVLYIAQGSFLSASNEQINEIANAVRESNVRFLWVARGEATRLKEICGHMGLVLEWCDQLRVLSHSSVGGFWSHCGWNSTKEGVISGVPFLTFPINLDQPFNSKMIVEDLKIGLRVKEDVKGDILVKKFEIVKLVCEFMDFDSDLTRDIREKSRKFKKICGDAIGNGGSADNDLNAFIGDIVTHCSQYTHA*