AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0304920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0304920 MtrunA17_Chr2g0333251 90.537 708 30 3 1 675 1 704 0.0 1215
Msa0304920 MtrunA17_Chr3g0137541 42.486 692 308 11 46 652 15 701 2.20e-162 483
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0304920 AT3G15920.1 41.108 776 335 20 1 675 1 755 7.58e-169 502
Msa0304920 AT4G32160.1 39.942 691 326 11 46 655 16 698 9.36e-140 426
Msa0304920 AT2G25350.1 36.036 666 314 14 46 636 15 643 2.00e-107 339
Msa0304920 AT2G25350.2 37.311 595 286 10 46 565 15 597 1.34e-105 335
Msa0304920 AT2G25350.5 37.882 557 259 10 46 527 15 559 2.77e-99 316
Msa0304920 AT2G25350.3 37.882 557 259 10 46 527 15 559 2.77e-99 316
Msa0304920 AT2G25350.4 37.924 472 206 10 46 442 15 474 6.14e-78 257

Find 140 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATCTGCTGCATCTGTTTC+TGG 0.096087 2_3:-62295042 Msa0304920:CDS
CCCACACCTCTTCTTCTTCT+TGG 0.129132 2_3:-62296683 Msa0304920:CDS
CCGTGGCTAGTCTCTGCTTC+TGG 0.153799 2_3:+62294587 None:intergenic
TTGTAGACAATGCCAGTTTA+AGG 0.154348 2_3:-62291503 Msa0304920:CDS
TCTCTTCCACCATTCCTTCT+TGG 0.181294 2_3:-62296656 Msa0304920:CDS
TCATCTTCTTGTTCAGGATA+TGG 0.182716 2_3:+62296828 None:intergenic
AATTAAAAGTGAAGCTCTTT+TGG 0.255854 2_3:-62295555 Msa0304920:CDS
TGCTTGCTAAATGTGATTAT+TGG 0.277573 2_3:+62291217 None:intergenic
GGAGTCCACCACCACCTAAT+TGG 0.288197 2_3:-62296728 Msa0304920:CDS
GATGTTTCGCATGACCTTCC+TGG 0.294851 2_3:-62294694 Msa0304920:CDS
TAATCATCATCTTCTTGTTC+AGG 0.297738 2_3:+62296822 None:intergenic
ATTGACTTGTTTCCTTAAAC+TGG 0.308319 2_3:+62291491 None:intergenic
TACTTCACCATCTGATGCTT+TGG 0.326539 2_3:-62292202 Msa0304920:CDS
CTCTTCCTCTTGGTATGGAT+TGG 0.330203 2_3:-62296749 Msa0304920:CDS
TACACAAATGCAGTGGGATA+TGG 0.344319 2_3:-62293031 Msa0304920:CDS
TACAAAAGCATCCGTTGTTC+AGG 0.349368 2_3:-62292852 Msa0304920:CDS
AGCTGTGTCAACTTTGCTTC+AGG 0.353816 2_3:-62294716 Msa0304920:CDS
GGACAACTAATGAAGAATTA+AGG 0.355410 2_3:-62291545 Msa0304920:CDS
TATACAACTACAGATGATAC+TGG 0.355565 2_3:-62291567 Msa0304920:CDS
TGTTAGCAACATCAGATAAT+CGG 0.359290 2_3:-62292176 Msa0304920:CDS
TTCTCCTCTTCCTCTTGGTA+TGG 0.359729 2_3:-62296754 Msa0304920:CDS
GTGGCGGGACCGTTCCAATT+AGG 0.363237 2_3:+62296714 None:intergenic
ATTTGCACAGAATTCTATTC+CGG 0.363561 2_3:+62291261 None:intergenic
TCAGCGACGGCGTTTATTAG+AGG 0.363778 2_3:-62295382 Msa0304920:intron
CATCTTCTTGTTCAGGATAT+GGG 0.371900 2_3:+62296829 None:intergenic
CGTGGCTAGTCTCTGCTTCT+GGG 0.375277 2_3:+62294588 None:intergenic
GGAACGGTCCCGCCACTCTC+TGG 0.377769 2_3:-62296707 Msa0304920:CDS
ATCGAGTATAGTTAAATTGC+CGG 0.390524 2_3:-62291280 Msa0304920:three_prime_UTR
ACTATAGCTCTTCGCCTAGA+TGG 0.395183 2_3:-62294817 Msa0304920:CDS
CATAACCATGTGAACCATCT+TGG 0.401669 2_3:+62295079 None:intergenic
AGATATGAAGTTGCTAATAA+AGG 0.405971 2_3:-62292735 Msa0304920:CDS
TTACTTGTAGGTCAAAGATT+TGG 0.407476 2_3:-62293130 Msa0304920:intron
CCCTTCTGAGGTTTCTGAGC+TGG 0.417560 2_3:-62295010 Msa0304920:CDS
CCTTCTGAGGTTTCTGAGCT+GGG 0.420819 2_3:-62295009 Msa0304920:CDS
GACAAGGTCACTGAGAATTC+TGG 0.421046 2_3:-62294844 Msa0304920:CDS
GCAACAGCTCAGCGAATTGA+TGG 0.429244 2_3:-62292675 Msa0304920:CDS
GTATGTACCCGTATGTTACT+AGG 0.430612 2_3:-62291355 Msa0304920:three_prime_UTR
GTGTGGGGCCAGAGAGTGGC+GGG 0.434926 2_3:+62296699 None:intergenic
CTCATTAGTAAAGTCTTGGC+TGG 0.443866 2_3:+62294879 None:intergenic
ACACCTTCTCCTCTTCCTCT+TGG 0.452825 2_3:-62296759 Msa0304920:CDS
TGGCGAAGGCAGGTATTTCA+TGG 0.455775 2_3:+62295598 None:intergenic
GACGTCTGTTCATCTGAAAT+AGG 0.456411 2_3:+62295129 None:intergenic
TGATCAACACTTGTTTCAGT+TGG 0.459583 2_3:+62294910 None:intergenic
AGCAAGATTGAATCAAGAAA+TGG 0.460614 2_3:-62294539 Msa0304920:CDS
TTCATCTTCCTCATTCTCCT+CGG 0.464822 2_3:+62291443 None:intergenic
ACTTCTCGATACAGAAATAT+CGG 0.467786 2_3:+62295338 None:intergenic
CTGAGTTTCCAGAGGATACA+TGG 0.469287 2_3:+62294668 None:intergenic
ATAACCATGTGAACCATCTT+GGG 0.473354 2_3:+62295080 None:intergenic
GAAGAAACAAACATCATGGT+TGG 0.475129 2_3:+62291192 None:intergenic
ATTGCGGACAACTTAACATC+GGG 0.479149 2_3:-62294949 Msa0304920:CDS
ATGTTTCGCATGACCTTCCT+GGG 0.483805 2_3:-62294693 Msa0304920:CDS
TATCCTCATTAGTAAAGTCT+TGG 0.484477 2_3:+62294875 None:intergenic
TTATAATGATTTAGGATGAA+AGG 0.489862 2_3:-62292889 Msa0304920:intron
ATGGGATCAGGCACAGCTCT+TGG 0.494460 2_3:-62291628 Msa0304920:intron
GAAAGTCCAAGAAGAAGAAG+AGG 0.496170 2_3:+62296677 None:intergenic
GAGAACTCTTCAGAAGGAAA+AGG 0.505418 2_3:-62292349 Msa0304920:CDS
CCTGGGAGCCATGTATCCTC+TGG 0.509448 2_3:-62294676 Msa0304920:CDS
AAAAGTAACCTAGTAACATA+CGG 0.512631 2_3:+62291347 None:intergenic
CATGGTTATGTTAAAGCTCG+TGG 0.512634 2_3:-62295066 Msa0304920:CDS
GAAGAAGAAGGAGAGGATTG+AGG 0.519182 2_3:+62296624 None:intergenic
CCGTTCCAATTAGGTGGTGG+TGG 0.524336 2_3:+62296723 None:intergenic
GACGGCGTTTATTAGAGGAT+TGG 0.529635 2_3:-62295377 Msa0304920:CDS
GTTCTAACTGAGAGCTTCTG+AGG 0.530046 2_3:+62292702 None:intergenic
TGAAGAATTAAGGAAAATGC+TGG 0.530259 2_3:-62291535 Msa0304920:CDS
AGAGGTGTGGGGCCAGAGAG+TGG 0.533366 2_3:+62296695 None:intergenic
CCAAGAAGAAGAAGAGGTGT+GGG 0.534848 2_3:+62296683 None:intergenic
TGGTGATGATACCCCTTCTG+AGG 0.536049 2_3:-62295022 Msa0304920:CDS
GTGTGAAGTCGGCTCCATCT+AGG 0.536680 2_3:+62294803 None:intergenic
CCAGAGGATACATGGCTCCC+AGG 0.537554 2_3:+62294676 None:intergenic
ATTTCAGATGAACAGACGTC+TGG 0.538551 2_3:-62295126 Msa0304920:CDS
AACTTGTGTCGCTCATCCAA+TGG 0.540733 2_3:+62294628 None:intergenic
ACTCTTGAAGCCTCTTCTGA+AGG 0.541023 2_3:+62292271 None:intergenic
GGTGATAAATCATATGCGTA+TGG 0.541315 2_3:+62296882 None:intergenic
AATGAAATTGAAGTTTGAAG+AGG 0.542626 2_3:-62292977 Msa0304920:intron
CTGCAGAGAAAACATGCAGC+AGG 0.543507 2_3:-62293079 Msa0304920:CDS
AGGAGAAGGTGTTTCAGAAA+CGG 0.545944 2_3:+62296770 None:intergenic
CAATCCATACCAAGAGGAAG+AGG 0.549149 2_3:+62296750 None:intergenic
TGAGGAACAAGAAGCCAAGA+AGG 0.551912 2_3:+62296642 None:intergenic
CAGCCAAGACTTTACTAATG+AGG 0.552795 2_3:-62294878 Msa0304920:CDS
TCAATTTCATTTCTGTCTCG+AGG 0.553699 2_3:+62292989 None:intergenic
GCAACATCAGATAATCGGAT+TGG 0.554769 2_3:-62292171 Msa0304920:CDS
AACAAGAAGCCAAGAAGGAA+TGG 0.560175 2_3:+62296647 None:intergenic
ATACCAAGAGGAAGAGGAGA+AGG 0.563232 2_3:+62296756 None:intergenic
TCTCAAATCCGAGGAGAATG+AGG 0.568189 2_3:-62291451 Msa0304920:CDS
GGTGTGGGGCCAGAGAGTGG+CGG 0.572921 2_3:+62296698 None:intergenic
AGCATTAGCTGGTGTGAAGT+CGG 0.577674 2_3:+62294792 None:intergenic
TCCAAGAAGAAGAAGAGGTG+TGG 0.581193 2_3:+62296682 None:intergenic
GGACCGTTCCAATTAGGTGG+TGG 0.584048 2_3:+62296720 None:intergenic
TTCTTCTTCTGATCCCGTCG+TGG 0.585721 2_3:-62296604 Msa0304920:intron
TTCTAACTGAGAGCTTCTGA+GGG 0.594772 2_3:+62292703 None:intergenic
TATTCAGAGAACTCTTCAGA+AGG 0.594795 2_3:-62292355 Msa0304920:intron
AGGATACATGGCTCCCAGGA+AGG 0.600732 2_3:+62294680 None:intergenic
GTTTAGTTTAGTACCACGAC+GGG 0.601531 2_3:+62296591 None:intergenic
GGCGAAGGCAGGTATTTCAT+GGG 0.601932 2_3:+62295599 None:intergenic
CCCAGCTCAGAAACCTCAGA+AGG 0.602240 2_3:+62295009 None:intergenic
CCATCACATAGGACCCAAGA+TGG 0.604538 2_3:-62295093 Msa0304920:CDS
AAAGTAACCTAGTAACATAC+GGG 0.604874 2_3:+62291348 None:intergenic
AACAAATCCAAAGCATCAGA+TGG 0.605868 2_3:+62292195 None:intergenic
AGACCGTCAACAGAAAACAT+TGG 0.606258 2_3:-62294760 Msa0304920:CDS
AAGACAATATCTTGTGACAA+AGG 0.608890 2_3:-62294512 Msa0304920:intron
TATAACTATCTCAGTCCACT+CGG 0.615602 2_3:-62296801 Msa0304920:CDS
ACAAATGCAGTGGGATATGG+AGG 0.618627 2_3:-62293028 Msa0304920:CDS
AGTGTGCAATCCTTCAGAAG+AGG 0.619022 2_3:-62292281 Msa0304920:CDS
TAGCTGATATCGTTCATCAA+AGG 0.620616 2_3:+62296861 None:intergenic
GCGGGACCGTTCCAATTAGG+TGG 0.624328 2_3:+62296717 None:intergenic
CCATCTTGGGTCCTATGTGA+TGG 0.625709 2_3:+62295093 None:intergenic
AAAGGTTTACACAAATGCAG+TGG 0.626560 2_3:-62293038 Msa0304920:CDS
AAGGTTTACACAAATGCAGT+GGG 0.626811 2_3:-62293037 Msa0304920:CDS
AGTGGGATATGGAGGAACTT+CGG 0.629220 2_3:-62293020 Msa0304920:CDS
CATTTGCTTCTCCTGAACAA+CGG 0.635355 2_3:+62292841 None:intergenic
ATACAACTACAGATGATACT+GGG 0.636328 2_3:-62291566 Msa0304920:CDS
CCAGCTCAGAAACCTCAGAA+GGG 0.640075 2_3:+62295010 None:intergenic
GTGGTACTACACCATCACAT+AGG 0.640295 2_3:-62295104 Msa0304920:CDS
GATTGGTCTCTTGCTTGCAG+AGG 0.641568 2_3:-62292154 Msa0304920:intron
TATTGCGGACAACTTAACAT+CGG 0.642658 2_3:-62294950 Msa0304920:CDS
AAGAAGCCAAGAAGGAATGG+TGG 0.642967 2_3:+62296650 None:intergenic
TGAAAGTTCTGATCATATTG+CGG 0.642983 2_3:-62294965 Msa0304920:CDS
TCTCCTCGGATTTGAGAGCA+CGG 0.646545 2_3:+62291457 None:intergenic
GAAACGGCGTCGTTTCCGAG+TGG 0.648823 2_3:+62296786 None:intergenic
CAGCTCAGAAACCTCAGAAG+GGG 0.649657 2_3:+62295011 None:intergenic
TTAGGATGAAAGGTTGCTAG+CGG 0.654903 2_3:-62292879 Msa0304920:intron
CCGCCGTGCTCTCAAATCCG+AGG 0.655129 2_3:-62291460 Msa0304920:CDS
ACAAGATGTAGAAAATGTTG+TGG 0.656733 2_3:-62291604 Msa0304920:CDS
ACAGCTCAGCGAATTGATGG+AGG 0.664421 2_3:-62292672 Msa0304920:CDS
CCACCACCACCTAATTGGAA+CGG 0.664784 2_3:-62296723 Msa0304920:CDS
TCAGATGAACAGACGTCTGG+TGG 0.666802 2_3:-62295123 Msa0304920:CDS
AGTTTAGTTTAGTACCACGA+CGG 0.675186 2_3:+62296590 None:intergenic
AGGACCCAAGATGGTTCACA+TGG 0.679372 2_3:-62295084 Msa0304920:CDS
AATGTTGTGGATGCTGCGGA+AGG 0.680763 2_3:-62291591 Msa0304920:CDS
CCAGAAGCAGAGACTAGCCA+CGG 0.683328 2_3:-62294587 Msa0304920:CDS
CAAGAAGAAGAAGAGGTGTG+GGG 0.688228 2_3:+62296684 None:intergenic
TAACAAATCTGAGTTTCCAG+AGG 0.689483 2_3:+62294660 None:intergenic
GGGATATGGAGGAACTTCGG+AGG 0.692756 2_3:-62293017 Msa0304920:CDS
TGAGGATAATAGTACAGACA+AGG 0.697385 2_3:-62294860 Msa0304920:CDS
GTTGCAGCAAGAGCTAGATG+TGG 0.705517 2_3:-62292819 Msa0304920:CDS
GGACTCCAATCCATACCAAG+AGG 0.706252 2_3:+62296744 None:intergenic
AGAAAATGTTGTGGATGCTG+CGG 0.718543 2_3:-62291595 Msa0304920:CDS
TTGCGGACAACTTAACATCG+GGG 0.748961 2_3:-62294948 Msa0304920:CDS
CCTCGGATTTGAGAGCACGG+CGG 0.772593 2_3:+62291460 None:intergenic
TTTCTGAGCTGGGAACACCG+AGG 0.811651 2_3:-62294999 Msa0304920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTGTAATGAAAAAAAAA+AGG + chr2_3:62291568-62291587 None:intergenic 10.0%
!! GTATTAACAATTATTAAATT+TGG + chr2_3:62293929-62293948 None:intergenic 10.0%
!!! TTCAAAATATTTTCATTTTA+AGG - chr2_3:62294484-62294503 Msa0304920:intron 10.0%
!!! TCAAAATATTTTCATTTTAA+GGG - chr2_3:62294485-62294504 Msa0304920:intron 10.0%
!!! TAACAATTTATTATTTTCAT+TGG - chr2_3:62296167-62296186 Msa0304920:intron 10.0%
!!! TATTATCATTATAGTTTTAC+AGG - chr2_3:62291594-62291613 Msa0304920:CDS 15.0%
!! TTGTAGAAATTATGAAAATA+AGG + chr2_3:62291821-62291840 None:intergenic 15.0%
!! GAAAAAAAAATACAAAAACA+AGG + chr2_3:62292481-62292500 None:intergenic 15.0%
!!! TTAATTCTCAATATCTTTTT+CGG + chr2_3:62292548-62292567 None:intergenic 15.0%
!!! TTTTCTTTTCATTTTTTCAA+AGG - chr2_3:62292670-62292689 Msa0304920:CDS 15.0%
!!! TCTCTGTTTTTTTTTTTAAA+TGG - chr2_3:62293708-62293727 Msa0304920:intron 15.0%
!!! ATATTTAAAATATTGTCCAT+AGG - chr2_3:62294293-62294312 Msa0304920:intron 15.0%
!!! AAATATTATGTTTTACTTGT+AGG - chr2_3:62294975-62294994 Msa0304920:CDS 15.0%
!!! TCATTATAATTTTTCACTAT+AGG + chr2_3:62295217-62295236 None:intergenic 15.0%
!! GTGAAAAATTATAATGATTT+AGG - chr2_3:62295220-62295239 Msa0304920:intron 15.0%
!!! TTTTTATATCTGCAAATATA+TGG - chr2_3:62296470-62296489 Msa0304920:intron 15.0%
!!! TTTTATATCTGCAAATATAT+GGG - chr2_3:62296471-62296490 Msa0304920:intron 15.0%
!!! TTTGGAACTTTTTAGAAAAT+GGG + chr2_3:62292175-62292194 None:intergenic 20.0%
!!! TTTTGGAACTTTTTAGAAAA+TGG + chr2_3:62292176-62292195 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + chr2_3:62292206-62292225 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr2_3:62292207-62292226 None:intergenic 20.0%
!!! ATTTTTTTTTCAGCTGAAAA+AGG - chr2_3:62292490-62292509 Msa0304920:intron 20.0%
!! TGAAAATTAACAACTAACAT+TGG + chr2_3:62293734-62293753 None:intergenic 20.0%
!!! GTATATTAGGTGTTTTAAAA+TGG - chr2_3:62294315-62294334 Msa0304920:intron 20.0%
!!! TTGAACATATGACAATATTT+TGG + chr2_3:62294570-62294589 None:intergenic 20.0%
!! AAACAGATACAATCAATTAT+TGG + chr2_3:62294774-62294793 None:intergenic 20.0%
!! TATAAATGAATTAGAAGAAG+CGG + chr2_3:62294838-62294857 None:intergenic 20.0%
!!! TTATAATGATTTAGGATGAA+AGG - chr2_3:62295228-62295247 Msa0304920:intron 20.0%
!!! AATCGGATTTTCAAATTTTT+AGG + chr2_3:62295714-62295733 None:intergenic 20.0%
!! AACAAAAACATGAAGTTAAT+CGG + chr2_3:62295731-62295750 None:intergenic 20.0%
!!! TTTGTGCGAAAAATATTTTT+CGG - chr2_3:62295997-62296016 Msa0304920:intron 20.0%
!!! TTCTAAAATAAGTAGAATAG+GGG + chr2_3:62296116-62296135 None:intergenic 20.0%
!!! GTTCTAAAATAAGTAGAATA+GGG + chr2_3:62296117-62296136 None:intergenic 20.0%
!!! AGTTCTAAAATAAGTAGAAT+AGG + chr2_3:62296118-62296137 None:intergenic 20.0%
!!! TTATTTTAGAACTCCTATTT+TGG - chr2_3:62296125-62296144 Msa0304920:intron 20.0%
!!! TTAGAAAAGTTTTTTGCAAA+TGG + chr2_3:62296702-62296721 None:intergenic 20.0%
! TTATATATAAGCGCTTATCA+TGG - chr2_3:62291845-62291864 Msa0304920:intron 25.0%
!! AATTAAAAGTGAAGCTCTTT+TGG - chr2_3:62292562-62292581 Msa0304920:intron 25.0%
! ACGTATGTTGAATATCATAA+AGG + chr2_3:62292918-62292937 None:intergenic 25.0%
!!! TTTGTTATTGACTTTTCCAT+TGG - chr2_3:62293473-62293492 Msa0304920:intron 25.0%
! TTGAAACCAATAAAAGTTAG+AGG + chr2_3:62293761-62293780 None:intergenic 25.0%
! TTAAATCTGCATAAGTTGTA+TGG - chr2_3:62293795-62293814 Msa0304920:intron 25.0%
! CAGGTACAAAATTAAATCTA+TGG + chr2_3:62293874-62293893 None:intergenic 25.0%
!! ATTATGAAACTGTCATTTAG+TGG - chr2_3:62294007-62294026 Msa0304920:intron 25.0%
! ATATTGTCCATAGGTATATT+AGG - chr2_3:62294302-62294321 Msa0304920:intron 25.0%
! TAAAACACCTAATATACCTA+TGG + chr2_3:62294312-62294331 None:intergenic 25.0%
! AGGGCTAAATATAGTATTAT+AGG - chr2_3:62294504-62294523 Msa0304920:intron 25.0%
! CATTTCATATTCATAATGTG+GGG + chr2_3:62294635-62294654 None:intergenic 25.0%
! CCATTTCATATTCATAATGT+GGG + chr2_3:62294636-62294655 None:intergenic 25.0%
! ACCATTTCATATTCATAATG+TGG + chr2_3:62294637-62294656 None:intergenic 25.0%
! AGATACAATCAATTATTGGA+AGG + chr2_3:62294770-62294789 None:intergenic 25.0%
! AACAAGTTTAATCTCAATGA+TGG - chr2_3:62294900-62294919 Msa0304920:CDS 25.0%
! AATGAAATTGAAGTTTGAAG+AGG - chr2_3:62295140-62295159 Msa0304920:CDS 25.0%
!! TAACATCTCTTTTCACATTT+TGG - chr2_3:62295188-62295207 Msa0304920:intron 25.0%
! AGATATGAAGTTGCTAATAA+AGG - chr2_3:62295382-62295401 Msa0304920:intron 25.0%
! ACATTTATCTAAACTAGACT+GGG - chr2_3:62295537-62295556 Msa0304920:intron 25.0%
!!! GGTTTAGATTTTCTGTTTTT+AGG - chr2_3:62295685-62295704 Msa0304920:intron 25.0%
!! TGTAAATTTTCTTGTTGAAG+AGG - chr2_3:62295873-62295892 Msa0304920:intron 25.0%
!! TTGTGCGAAAAATATTTTTC+GGG - chr2_3:62295998-62296017 Msa0304920:intron 25.0%
!! AGCTTTAATCTTTACTTTCT+CGG - chr2_3:62296039-62296058 Msa0304920:intron 25.0%
! CAAATTATCATAGATTCATG+CGG + chr2_3:62296277-62296296 None:intergenic 25.0%
! TGAAAAAACTCAAATTTGAC+AGG + chr2_3:62296314-62296333 None:intergenic 25.0%
! AAATTTCAGAATCTTGTCAT+AGG + chr2_3:62296364-62296383 None:intergenic 25.0%
! ATAAAAAACTGTGAGTAAAG+AGG + chr2_3:62296457-62296476 None:intergenic 25.0%
! AAAAGTAACCTAGTAACATA+CGG + chr2_3:62296773-62296792 None:intergenic 25.0%
!!! CTTTTTTTTTTAGAGCTACT+AGG - chr2_3:62296788-62296807 Msa0304920:CDS 25.0%
TAATCATCATCTTCTTGTTC+AGG + chr2_3:62291298-62291317 None:intergenic 30.0%
!! TAGTTTTACAGGATTCAAGT+TGG - chr2_3:62291605-62291624 Msa0304920:CDS 30.0%
! AGTGTTTTGTAAGACTGTTT+AGG - chr2_3:62291751-62291770 Msa0304920:intron 30.0%
TTTGATAAGTTATCTTGGAG+AGG + chr2_3:62291991-62292010 None:intergenic 30.0%
!!! GCTGTTTTGATAAGTTATCT+TGG + chr2_3:62291996-62292015 None:intergenic 30.0%
TGTATCATATAAGACGTGTT+TGG + chr2_3:62292126-62292145 None:intergenic 30.0%
!!! TTGAAATGGGTCAGTTTTTT+TGG + chr2_3:62292193-62292212 None:intergenic 30.0%
!!! ATTCTCAATATCTTTTTCGG+TGG + chr2_3:62292545-62292564 None:intergenic 30.0%
AAGAAGCAAAAGATGAAAAG+AGG + chr2_3:62292601-62292620 None:intergenic 30.0%
ACTTCTCGATACAGAAATAT+CGG + chr2_3:62292782-62292801 None:intergenic 30.0%
! CTTTCATATTTTTCATGCCT+CGG + chr2_3:62293138-62293157 None:intergenic 30.0%
! TGAAAGTTCTGATCATATTG+CGG - chr2_3:62293152-62293171 Msa0304920:intron 30.0%
TATCCTCATTAGTAAAGTCT+TGG + chr2_3:62293245-62293264 None:intergenic 30.0%
AGCAAGATTGAATCAAGAAA+TGG - chr2_3:62293578-62293597 Msa0304920:intron 30.0%
AAGACAATATCTTGTGACAA+AGG - chr2_3:62293605-62293624 Msa0304920:intron 30.0%
! CATTTGCCTCTAACTTTTAT+TGG - chr2_3:62293752-62293771 Msa0304920:intron 30.0%
TGAAAAATCATACTTTGCCA+AGG + chr2_3:62293828-62293847 None:intergenic 30.0%
ATTTATTGAATGCGAACATC+AGG + chr2_3:62293893-62293912 None:intergenic 30.0%
GCATTCAATAAATTACCATC+AGG - chr2_3:62293900-62293919 Msa0304920:intron 30.0%
! TATTAAATTTGGCTTCCTGA+TGG + chr2_3:62293918-62293937 None:intergenic 30.0%
!!! ATCATGGTATTGGTTCATTT+TGG - chr2_3:62294041-62294060 Msa0304920:intron 30.0%
CCCACATTATGAATATGAAA+TGG - chr2_3:62294633-62294652 Msa0304920:CDS 30.0%
TTACTTGTAGGTCAAAGATT+TGG - chr2_3:62294987-62295006 Msa0304920:CDS 30.0%
! TTGTGTAAACCTTTCCTTTT+CGG + chr2_3:62295073-62295092 None:intergenic 30.0%
GTAACATATAAGAACCAGAA+AGG + chr2_3:62295495-62295514 None:intergenic 30.0%
GACATTTATCTAAACTAGAC+TGG - chr2_3:62295536-62295555 Msa0304920:intron 30.0%
ATTCTTGATCCTTCTACTAA+AGG - chr2_3:62295655-62295674 Msa0304920:intron 30.0%
!!! CCATTTTTTCCTTTAGTAGA+AGG + chr2_3:62295667-62295686 None:intergenic 30.0%
CCTTCTACTAAAGGAAAAAA+TGG - chr2_3:62295664-62295683 Msa0304920:intron 30.0%
TGTTAGCAACATCAGATAAT+CGG - chr2_3:62295941-62295960 Msa0304920:intron 30.0%
! TGTGCGAAAAATATTTTTCG+GGG - chr2_3:62295999-62296018 Msa0304920:intron 30.0%
GCTTTAATCTTTACTTTCTC+GGG - chr2_3:62296040-62296059 Msa0304920:intron 30.0%
CAGAGTGTAATATCCAAAAT+AGG + chr2_3:62296141-62296160 None:intergenic 30.0%
AGAGTAACACAATTGATGTA+GGG - chr2_3:62296231-62296250 Msa0304920:intron 30.0%
GAATCTTGTCATAGGAAAAT+TGG + chr2_3:62296356-62296375 None:intergenic 30.0%
ACAAGATGTAGAAAATGTTG+TGG - chr2_3:62296513-62296532 Msa0304920:intron 30.0%
TATACAACTACAGATGATAC+TGG - chr2_3:62296550-62296569 Msa0304920:intron 30.0%
ATACAACTACAGATGATACT+GGG - chr2_3:62296551-62296570 Msa0304920:intron 30.0%
GGACAACTAATGAAGAATTA+AGG - chr2_3:62296572-62296591 Msa0304920:intron 30.0%
TGAAGAATTAAGGAAAATGC+TGG - chr2_3:62296582-62296601 Msa0304920:intron 30.0%
!! ATTGACTTGTTTCCTTAAAC+TGG + chr2_3:62296629-62296648 None:intergenic 30.0%
AAAGTAACCTAGTAACATAC+GGG + chr2_3:62296772-62296791 None:intergenic 30.0%
ATCGAGTATAGTTAAATTGC+CGG - chr2_3:62296837-62296856 Msa0304920:CDS 30.0%
ATTTGCACAGAATTCTATTC+CGG + chr2_3:62296859-62296878 None:intergenic 30.0%
! TGCTTGCTAAATGTGATTAT+TGG + chr2_3:62296903-62296922 None:intergenic 30.0%
GGTGATAAATCATATGCGTA+TGG + chr2_3:62291238-62291257 None:intergenic 35.0%
TAGCTGATATCGTTCATCAA+AGG + chr2_3:62291259-62291278 None:intergenic 35.0%
CATCTTCTTGTTCAGGATAT+GGG + chr2_3:62291291-62291310 None:intergenic 35.0%
TCATCTTCTTGTTCAGGATA+TGG + chr2_3:62291292-62291311 None:intergenic 35.0%
TATAACTATCTCAGTCCACT+CGG - chr2_3:62291316-62291335 Msa0304920:three_prime_UTR 35.0%
! AGTTTAGTTTAGTACCACGA+CGG + chr2_3:62291530-62291549 None:intergenic 35.0%
TAGTAGTGGTAATAGCTTGA+GGG + chr2_3:62291640-62291659 None:intergenic 35.0%
CAAGTAATAATGACCCTGTT+TGG + chr2_3:62291895-62291914 None:intergenic 35.0%
TATACGCGCTTATGTTGATA+AGG - chr2_3:62292066-62292085 Msa0304920:intron 35.0%
! ATACGCGCTTATGTTGATAA+GGG - chr2_3:62292067-62292086 Msa0304920:intron 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - chr2_3:62292313-62292332 Msa0304920:CDS 35.0%
CCAAAGTAGGTCAATTATAC+CGG - chr2_3:62292326-62292345 Msa0304920:CDS 35.0%
CAAAGTAGGTCAATTATACC+GGG - chr2_3:62292327-62292346 Msa0304920:CDS 35.0%
AACTCAAGAAAAATTGCTGC+TGG + chr2_3:62292808-62292827 None:intergenic 35.0%
! TTCATTTTGCGTCTGAAGAA+AGG - chr2_3:62292880-62292899 Msa0304920:intron 35.0%
ATAACCATGTGAACCATCTT+GGG + chr2_3:62293040-62293059 None:intergenic 35.0%
TATTGCGGACAACTTAACAT+CGG - chr2_3:62293167-62293186 Msa0304920:intron 35.0%
TGATCAACACTTGTTTCAGT+TGG + chr2_3:62293210-62293229 None:intergenic 35.0%
TGAGGATAATAGTACAGACA+AGG - chr2_3:62293257-62293276 Msa0304920:intron 35.0%
! CTTCCAATGTTTTCTGTTGA+CGG + chr2_3:62293363-62293382 None:intergenic 35.0%
TAACAAATCTGAGTTTCCAG+AGG + chr2_3:62293460-62293479 None:intergenic 35.0%
! AGTTGTATGGTGTTTTTCCT+TGG - chr2_3:62293808-62293827 Msa0304920:intron 35.0%
TTAATACCCTGTAGTCTGTA+TGG - chr2_3:62293942-62293961 Msa0304920:intron 35.0%
TCCAAATACTCATTTGTAGC+AGG - chr2_3:62293972-62293991 Msa0304920:intron 35.0%
TCCTGCTACAAATGAGTATT+TGG + chr2_3:62293976-62293995 None:intergenic 35.0%
CACAGTATCAATCATGGTAT+TGG - chr2_3:62294031-62294050 Msa0304920:intron 35.0%
GATACTGTGAACTTCTTGTA+TGG + chr2_3:62294359-62294378 None:intergenic 35.0%
TTGTCAAATGCAGAGAAAAC+AGG + chr2_3:62294417-62294436 None:intergenic 35.0%
! TTGTCATATGTTCAAGTTCG+AGG - chr2_3:62294575-62294594 Msa0304920:CDS 35.0%
GTAACTGATGAATGTGTTCA+AGG - chr2_3:62294606-62294625 Msa0304920:CDS 35.0%
!!! TGTATCTGTTTTTGCAAGAG+AGG - chr2_3:62294783-62294802 Msa0304920:CDS 35.0%
!!! CTGTTTTAACCGAAAAGGAA+AGG - chr2_3:62295061-62295080 Msa0304920:CDS 35.0%
AAAGGTTTACACAAATGCAG+TGG - chr2_3:62295079-62295098 Msa0304920:CDS 35.0%
AAGGTTTACACAAATGCAGT+GGG - chr2_3:62295080-62295099 Msa0304920:CDS 35.0%
TCAATTTCATTTCTGTCTCG+AGG + chr2_3:62295131-62295150 None:intergenic 35.0%
! CATCTCTTTTCACATTTTGG+TGG - chr2_3:62295191-62295210 Msa0304920:intron 35.0%
AAAAAGTAGATGTGGAGGTA+TGG - chr2_3:62295468-62295487 Msa0304920:intron 35.0%
AACTTAAACACGTAGTCAGA+TGG + chr2_3:62295581-62295600 None:intergenic 35.0%
TATTCAGAGAACTCTTCAGA+AGG - chr2_3:62295762-62295781 Msa0304920:intron 35.0%
! AACAAATCCAAAGCATCAGA+TGG + chr2_3:62295925-62295944 None:intergenic 35.0%
!!! AAAATATTTTTCGGGGCACT+TGG - chr2_3:62296006-62296025 Msa0304920:intron 35.0%
AAAGGCAGCTTGTAAATTTG+CGG + chr2_3:62296079-62296098 None:intergenic 35.0%
GCTGCCTTTACAATCTATAA+CGG - chr2_3:62296090-62296109 Msa0304920:intron 35.0%
! CTACATCAATTGTGTTACTC+TGG + chr2_3:62296232-62296251 None:intergenic 35.0%
CAGAGTAACACAATTGATGT+AGG - chr2_3:62296230-62296249 Msa0304920:intron 35.0%
TTCACCTAGCAATTATCACT+TGG - chr2_3:62296382-62296401 Msa0304920:intron 35.0%
TCACCTAGCAATTATCACTT+GGG - chr2_3:62296383-62296402 Msa0304920:intron 35.0%
TAAAGAGGACACCATATAGA+AGG + chr2_3:62296442-62296461 None:intergenic 35.0%
ATCTGCAAATATATGGGATC+AGG - chr2_3:62296477-62296496 Msa0304920:intron 35.0%
TTGTAGACAATGCCAGTTTA+AGG - chr2_3:62296614-62296633 Msa0304920:CDS 35.0%
!! AGGAGAAGGTGTTTCAGAAA+CGG + chr2_3:62291350-62291369 None:intergenic 40.0%
GAAAGTCCAAGAAGAAGAAG+AGG + chr2_3:62291443-62291462 None:intergenic 40.0%
AACAAGAAGCCAAGAAGGAA+TGG + chr2_3:62291473-62291492 None:intergenic 40.0%
AGAAGAAGAAGAAGAAGGAG+AGG + chr2_3:62291503-62291522 None:intergenic 40.0%
GGATCAGAAGAAGAAGAAGA+AGG + chr2_3:62291508-62291527 None:intergenic 40.0%
! GTTTAGTTTAGTACCACGAC+GGG + chr2_3:62291529-62291548 None:intergenic 40.0%
AGTAGTGGTAATAGCTTGAG+GGG + chr2_3:62291639-62291658 None:intergenic 40.0%
CTAGTAGTGGTAATAGCTTG+AGG + chr2_3:62291641-62291660 None:intergenic 40.0%
GCGCAATATGATTCTAGTAG+TGG + chr2_3:62291654-62291673 None:intergenic 40.0%
!! GACTGACTTGAGAAAACAAG+TGG + chr2_3:62291694-62291713 None:intergenic 40.0%
TGCTATAAGCTGATCCAAAC+AGG - chr2_3:62291878-62291897 Msa0304920:intron 40.0%
GCTATAAGCTGATCCAAACA+GGG - chr2_3:62291879-62291898 Msa0304920:intron 40.0%
CCGGTATAATTGACCTACTT+TGG + chr2_3:62292329-62292348 None:intergenic 40.0%
AAAAAATACTACCTCCGTCC+CGG + chr2_3:62292348-62292367 None:intergenic 40.0%
!!! CTCAATATCTTTTTCGGTGG+TGG + chr2_3:62292542-62292561 None:intergenic 40.0%
!! AAGTGAAGCTCTTTTGGAAG+AGG - chr2_3:62292568-62292587 Msa0304920:intron 40.0%
!!! GTTTTTTCTTCCTTCAGCGA+CGG - chr2_3:62292722-62292741 Msa0304920:CDS 40.0%
! GACGTCTGTTCATCTGAAAT+AGG + chr2_3:62292991-62293010 None:intergenic 40.0%
ATTTCAGATGAACAGACGTC+TGG - chr2_3:62292991-62293010 Msa0304920:CDS 40.0%
CATAACCATGTGAACCATCT+TGG + chr2_3:62293041-62293060 None:intergenic 40.0%
CATGGTTATGTTAAAGCTCG+TGG - chr2_3:62293051-62293070 Msa0304920:CDS 40.0%
ATTGCGGACAACTTAACATC+GGG - chr2_3:62293168-62293187 Msa0304920:intron 40.0%
CTCATTAGTAAAGTCTTGGC+TGG + chr2_3:62293241-62293260 None:intergenic 40.0%
CAGCCAAGACTTTACTAATG+AGG - chr2_3:62293239-62293258 Msa0304920:intron 40.0%
! CTTTTGACATGAGCATTAGC+TGG + chr2_3:62293339-62293358 None:intergenic 40.0%
AGACCGTCAACAGAAAACAT+TGG - chr2_3:62293357-62293376 Msa0304920:intron 40.0%
AGAGAGAAAGAGAGAGAGAA+AGG + chr2_3:62293693-62293712 None:intergenic 40.0%
GATACACCATACAGACTACA+GGG + chr2_3:62293951-62293970 None:intergenic 40.0%
TGATACACCATACAGACTAC+AGG + chr2_3:62293952-62293971 None:intergenic 40.0%
AGTGGTCACAGTATCAATCA+TGG - chr2_3:62294025-62294044 Msa0304920:intron 40.0%
! CATTTTGGATCAGACTTTCG+TGG - chr2_3:62294056-62294075 Msa0304920:intron 40.0%
CAGACTTTCGTGGTTCATTA+TGG - chr2_3:62294066-62294085 Msa0304920:intron 40.0%
CTAAGTCAGTGCTCAGTTAA+TGG - chr2_3:62294098-62294117 Msa0304920:intron 40.0%
TGCGAACTTGTGAAGTTCTT+AGG - chr2_3:62294136-62294155 Msa0304920:intron 40.0%
GTTGTTTACAGAACTAGCTC+AGG - chr2_3:62294201-62294220 Msa0304920:intron 40.0%
GAAGTTCACAGTATCACATG+CGG - chr2_3:62294364-62294383 Msa0304920:intron 40.0%
AAGTTCACAGTATCACATGC+GGG - chr2_3:62294365-62294384 Msa0304920:intron 40.0%
! TCATATGTTCAAGTTCGAGG+AGG - chr2_3:62294578-62294597 Msa0304920:CDS 40.0%
!!! ATCTGTTTTTGCAAGAGAGG+AGG - chr2_3:62294786-62294805 Msa0304920:CDS 40.0%
!!! TCTGTTTTTGCAAGAGAGGA+GGG - chr2_3:62294787-62294806 Msa0304920:CDS 40.0%
TACACAAATGCAGTGGGATA+TGG - chr2_3:62295086-62295105 Msa0304920:CDS 40.0%
TTAGGATGAAAGGTTGCTAG+CGG - chr2_3:62295238-62295257 Msa0304920:intron 40.0%
!! TACAAAAGCATCCGTTGTTC+AGG - chr2_3:62295265-62295284 Msa0304920:intron 40.0%
CATTTGCTTCTCCTGAACAA+CGG + chr2_3:62295279-62295298 None:intergenic 40.0%
TTCTAACTGAGAGCTTCTGA+GGG + chr2_3:62295417-62295436 None:intergenic 40.0%
GATGGAGGAAAAAGTAGATG+TGG - chr2_3:62295460-62295479 Msa0304920:intron 40.0%
GACTGGGAAAGTAATTTGAC+TGG - chr2_3:62295553-62295572 Msa0304920:CDS 40.0%
GAGAACTCTTCAGAAGGAAA+AGG - chr2_3:62295768-62295787 Msa0304920:intron 40.0%
TACTTCACCATCTGATGCTT+TGG - chr2_3:62295915-62295934 Msa0304920:intron 40.0%
GCAACATCAGATAATCGGAT+TGG - chr2_3:62295946-62295965 Msa0304920:intron 40.0%
TAGGAAAATTGGAGTGTGTC+TGG + chr2_3:62296345-62296364 None:intergenic 40.0%
CAACCCAAGTGATAATTGCT+AGG + chr2_3:62296389-62296408 None:intergenic 40.0%
ACACCATATAGAAGGCTAAG+GGG + chr2_3:62296434-62296453 None:intergenic 40.0%
GACACCATATAGAAGGCTAA+GGG + chr2_3:62296435-62296454 None:intergenic 40.0%
AGAAAATGTTGTGGATGCTG+CGG - chr2_3:62296522-62296541 Msa0304920:intron 40.0%
TTCATCTTCCTCATTCTCCT+CGG + chr2_3:62296677-62296696 None:intergenic 40.0%
GTATGTACCCGTATGTTACT+AGG - chr2_3:62296762-62296781 Msa0304920:CDS 40.0%
ATACCAAGAGGAAGAGGAGA+AGG + chr2_3:62291364-62291383 None:intergenic 45.0%
TTCTCCTCTTCCTCTTGGTA+TGG - chr2_3:62291363-62291382 Msa0304920:three_prime_UTR 45.0%
CAATCCATACCAAGAGGAAG+AGG + chr2_3:62291370-62291389 None:intergenic 45.0%
CTCTTCCTCTTGGTATGGAT+TGG - chr2_3:62291368-62291387 Msa0304920:three_prime_UTR 45.0%
! CAAGAAGAAGAAGAGGTGTG+GGG + chr2_3:62291436-62291455 None:intergenic 45.0%
! CCAAGAAGAAGAAGAGGTGT+GGG + chr2_3:62291437-62291456 None:intergenic 45.0%
TCCAAGAAGAAGAAGAGGTG+TGG + chr2_3:62291438-62291457 None:intergenic 45.0%
TCTCTTCCACCATTCCTTCT+TGG - chr2_3:62291461-62291480 Msa0304920:CDS 45.0%
AAGAAGCCAAGAAGGAATGG+TGG + chr2_3:62291470-62291489 None:intergenic 45.0%
TGAGGAACAAGAAGCCAAGA+AGG + chr2_3:62291478-62291497 None:intergenic 45.0%
GAAGAAGAAGGAGAGGATTG+AGG + chr2_3:62291496-62291515 None:intergenic 45.0%
GTAGGTCAATTATACCGGGA+CGG - chr2_3:62292331-62292350 Msa0304920:CDS 45.0%
GACGGCGTTTATTAGAGGAT+TGG - chr2_3:62292740-62292759 Msa0304920:CDS 45.0%
GTGGTACTACACCATCACAT+AGG - chr2_3:62293013-62293032 Msa0304920:CDS 45.0%
TCATCTGCTGCATCTGTTTC+TGG - chr2_3:62293075-62293094 Msa0304920:CDS 45.0%
TTGCGGACAACTTAACATCG+GGG - chr2_3:62293169-62293188 Msa0304920:intron 45.0%
GACAAGGTCACTGAGAATTC+TGG - chr2_3:62293273-62293292 Msa0304920:intron 45.0%
ACTATAGCTCTTCGCCTAGA+TGG - chr2_3:62293300-62293319 Msa0304920:intron 45.0%
AGCATTAGCTGGTGTGAAGT+CGG + chr2_3:62293328-62293347 None:intergenic 45.0%
AGCTGTGTCAACTTTGCTTC+AGG - chr2_3:62293401-62293420 Msa0304920:intron 45.0%
ATGTTTCGCATGACCTTCCT+GGG - chr2_3:62293424-62293443 Msa0304920:intron 45.0%
CTGAGTTTCCAGAGGATACA+TGG + chr2_3:62293452-62293471 None:intergenic 45.0%
! AACTTGTGTCGCTCATCCAA+TGG + chr2_3:62293492-62293511 None:intergenic 45.0%
!! TTCAACATCCGTTTTTGCCG+TGG + chr2_3:62293550-62293569 None:intergenic 45.0%
! ACAGAACTAGCTCAGGCTTT+TGG - chr2_3:62294208-62294227 Msa0304920:intron 45.0%
GCGGGATTCAGCTATACATA+AGG - chr2_3:62294383-62294402 Msa0304920:intron 45.0%
! TGTTCAAGTTCGAGGAGGAA+AGG - chr2_3:62294583-62294602 Msa0304920:CDS 45.0%
! GTTCAAGTTCGAGGAGGAAA+GGG - chr2_3:62294584-62294603 Msa0304920:CDS 45.0%
GATAAGTTTCAGCACGCAAG+AGG + chr2_3:62294708-62294727 None:intergenic 45.0%
!!! GCAGGCTGTTTTAACCGAAA+AGG - chr2_3:62295056-62295075 Msa0304920:CDS 45.0%
ACAAATGCAGTGGGATATGG+AGG - chr2_3:62295089-62295108 Msa0304920:CDS 45.0%
AGTGGGATATGGAGGAACTT+CGG - chr2_3:62295097-62295116 Msa0304920:CDS 45.0%
GTTCTAACTGAGAGCTTCTG+AGG + chr2_3:62295418-62295437 None:intergenic 45.0%
GGAGGAAAAAGTAGATGTGG+AGG - chr2_3:62295463-62295482 Msa0304920:intron 45.0%
AGTGTGCAATCCTTCAGAAG+AGG - chr2_3:62295836-62295855 Msa0304920:intron 45.0%
ACTCTTGAAGCCTCTTCTGA+AGG + chr2_3:62295849-62295868 None:intergenic 45.0%
GGGGCCGTTATAGATTGTAA+AGG + chr2_3:62296097-62296116 None:intergenic 45.0%
! GGAAAATCCGTCCTTTTGCA+TGG + chr2_3:62296211-62296230 None:intergenic 45.0%
GGACACCATATAGAAGGCTA+AGG + chr2_3:62296436-62296455 None:intergenic 45.0%
TCTCAAATCCGAGGAGAATG+AGG - chr2_3:62296666-62296685 Msa0304920:CDS 45.0%
!!! AGTTTTTTATTTTTTTATTT+AGG - chr2_3:62292445-62292464 Msa0304920:intron 5.0%
ACACCTTCTCCTCTTCCTCT+TGG - chr2_3:62291358-62291377 Msa0304920:three_prime_UTR 50.0%
GGACTCCAATCCATACCAAG+AGG + chr2_3:62291376-62291395 None:intergenic 50.0%
CCACCACCACCTAATTGGAA+CGG - chr2_3:62291394-62291413 Msa0304920:exon 50.0%
CCCACACCTCTTCTTCTTCT+TGG - chr2_3:62291434-62291453 Msa0304920:CDS 50.0%
TTCTTCTTCTGATCCCGTCG+TGG - chr2_3:62291513-62291532 Msa0304920:CDS 50.0%
GGCGAAGGCAGGTATTTCAT+GGG + chr2_3:62292521-62292540 None:intergenic 50.0%
TGGCGAAGGCAGGTATTTCA+TGG + chr2_3:62292522-62292541 None:intergenic 50.0%
!!! ATCTTTTTCGGTGGTGGCGA+AGG + chr2_3:62292536-62292555 None:intergenic 50.0%
CTAATAAACGCCGTCGCTGA+AGG + chr2_3:62292735-62292754 None:intergenic 50.0%
TCAGCGACGGCGTTTATTAG+AGG - chr2_3:62292735-62292754 Msa0304920:CDS 50.0%
TCAGATGAACAGACGTCTGG+TGG - chr2_3:62292994-62293013 Msa0304920:CDS 50.0%
CCATCTTGGGTCCTATGTGA+TGG + chr2_3:62293027-62293046 None:intergenic 50.0%
CCATCACATAGGACCCAAGA+TGG - chr2_3:62293024-62293043 Msa0304920:CDS 50.0%
AGGACCCAAGATGGTTCACA+TGG - chr2_3:62293033-62293052 Msa0304920:CDS 50.0%
! TGGTGATGATACCCCTTCTG+AGG - chr2_3:62293095-62293114 Msa0304920:CDS 50.0%
CAGCTCAGAAACCTCAGAAG+GGG + chr2_3:62293109-62293128 None:intergenic 50.0%
CCAGCTCAGAAACCTCAGAA+GGG + chr2_3:62293110-62293129 None:intergenic 50.0%
!! CCTTCTGAGGTTTCTGAGCT+GGG - chr2_3:62293108-62293127 Msa0304920:CDS 50.0%
GATGTTTCGCATGACCTTCC+TGG - chr2_3:62293423-62293442 Msa0304920:intron 50.0%
! GAGACTAGCCACGGCAAAAA+CGG - chr2_3:62293539-62293558 Msa0304920:intron 50.0%
! GAACTAGCTCAGGCTTTTGG+AGG - chr2_3:62294211-62294230 Msa0304920:intron 50.0%
CTGCAGAGAAAACATGCAGC+AGG - chr2_3:62295038-62295057 Msa0304920:CDS 50.0%
GTTGCAGCAAGAGCTAGATG+TGG - chr2_3:62295298-62295317 Msa0304920:CDS 50.0%
GCAACAGCTCAGCGAATTGA+TGG - chr2_3:62295442-62295461 Msa0304920:intron 50.0%
ACAGCTCAGCGAATTGATGG+AGG - chr2_3:62295445-62295464 Msa0304920:intron 50.0%
! TGTGGAGGTATGGTCCTTTC+TGG - chr2_3:62295478-62295497 Msa0304920:intron 50.0%
!! GATTGGTCTCTTGCTTGCAG+AGG - chr2_3:62295963-62295982 Msa0304920:intron 50.0%
GGGCAGCAAGCAGTAAAACA+TGG + chr2_3:62296414-62296433 None:intergenic 50.0%
! CTGCCCCTTAGCCTTCTATA+TGG - chr2_3:62296428-62296447 Msa0304920:intron 50.0%
AATGTTGTGGATGCTGCGGA+AGG - chr2_3:62296526-62296545 Msa0304920:intron 50.0%
TCTCCTCGGATTTGAGAGCA+CGG + chr2_3:62296663-62296682 None:intergenic 50.0%
GGAGTCCACCACCACCTAAT+TGG - chr2_3:62291389-62291408 Msa0304920:exon 55.0%
! CCGTTCCAATTAGGTGGTGG+TGG + chr2_3:62291397-62291416 None:intergenic 55.0%
GGACCGTTCCAATTAGGTGG+TGG + chr2_3:62291400-62291419 None:intergenic 55.0%
GGTCAATTATACCGGGACGG+AGG - chr2_3:62292334-62292353 Msa0304920:CDS 55.0%
!! CCCTTCTGAGGTTTCTGAGC+TGG - chr2_3:62293107-62293126 Msa0304920:CDS 55.0%
CCCAGCTCAGAAACCTCAGA+AGG + chr2_3:62293111-62293130 None:intergenic 55.0%
TTTCTGAGCTGGGAACACCG+AGG - chr2_3:62293118-62293137 Msa0304920:CDS 55.0%
! GTGTGAAGTCGGCTCCATCT+AGG + chr2_3:62293317-62293336 None:intergenic 55.0%
AGGATACATGGCTCCCAGGA+AGG + chr2_3:62293440-62293459 None:intergenic 55.0%
!! CGTGGCTAGTCTCTGCTTCT+GGG + chr2_3:62293532-62293551 None:intergenic 55.0%
! CCAGAAGCAGAGACTAGCCA+CGG - chr2_3:62293530-62293549 Msa0304920:intron 55.0%
GGGATATGGAGGAACTTCGG+AGG - chr2_3:62295100-62295119 Msa0304920:CDS 55.0%
ATGGGATCAGGCACAGCTCT+TGG - chr2_3:62296489-62296508 Msa0304920:intron 55.0%
GAAACGGCGTCGTTTCCGAG+TGG + chr2_3:62291334-62291353 None:intergenic 60.0%
GCGGGACCGTTCCAATTAGG+TGG + chr2_3:62291403-62291422 None:intergenic 60.0%
! GTGGCGGGACCGTTCCAATT+AGG + chr2_3:62291406-62291425 None:intergenic 60.0%
!! TTTTCGGTGGTGGCGAAGGC+AGG + chr2_3:62292532-62292551 None:intergenic 60.0%
CCAGAGGATACATGGCTCCC+AGG + chr2_3:62293444-62293463 None:intergenic 60.0%
CCTGGGAGCCATGTATCCTC+TGG - chr2_3:62293441-62293460 Msa0304920:intron 60.0%
!! CCGTGGCTAGTCTCTGCTTC+TGG + chr2_3:62293533-62293552 None:intergenic 60.0%
! CCTCGGATTTGAGAGCACGG+CGG + chr2_3:62296660-62296679 None:intergenic 60.0%
! AGAGGTGTGGGGCCAGAGAG+TGG + chr2_3:62291425-62291444 None:intergenic 65.0%
CCGCCGTGCTCTCAAATCCG+AGG - chr2_3:62296657-62296676 Msa0304920:CDS 65.0%
GGAACGGTCCCGCCACTCTC+TGG - chr2_3:62291410-62291429 Msa0304920:CDS 70.0%
GTGTGGGGCCAGAGAGTGGC+GGG + chr2_3:62291421-62291440 None:intergenic 70.0%
GGTGTGGGGCCAGAGAGTGG+CGG + chr2_3:62291422-62291441 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 62291206 62296933 62291206 ID=Msa0304920;Name=Msa0304920
chr2_3 mRNA 62291206 62296933 62291206 ID=Msa0304920-mRNA-1;Parent=Msa0304920;Name=Msa0304920-mRNA-1;_AED=0.06;_eAED=0.06;_QI=23|0.85|1|1|1|1|8|192|675
chr2_3 exon 62291206 62291640 62291206 ID=Msa0304920-mRNA-1:exon:20783;Parent=Msa0304920-mRNA-1
chr2_3 exon 62292155 62292370 62292155 ID=Msa0304920-mRNA-1:exon:20782;Parent=Msa0304920-mRNA-1
chr2_3 exon 62292655 62292897 62292655 ID=Msa0304920-mRNA-1:exon:20781;Parent=Msa0304920-mRNA-1
chr2_3 exon 62292978 62293142 62292978 ID=Msa0304920-mRNA-1:exon:20780;Parent=Msa0304920-mRNA-1
chr2_3 exon 62294513 62295171 62294513 ID=Msa0304920-mRNA-1:exon:20779;Parent=Msa0304920-mRNA-1
chr2_3 exon 62295292 62295400 62295292 ID=Msa0304920-mRNA-1:exon:20778;Parent=Msa0304920-mRNA-1
chr2_3 exon 62295550 62295636 62295550 ID=Msa0304920-mRNA-1:exon:20777;Parent=Msa0304920-mRNA-1
chr2_3 exon 62296605 62296933 62296605 ID=Msa0304920-mRNA-1:exon:20776;Parent=Msa0304920-mRNA-1
chr2_3 five_prime_UTR 62296911 62296933 62296911 ID=Msa0304920-mRNA-1:five_prime_utr;Parent=Msa0304920-mRNA-1
chr2_3 CDS 62296605 62296910 62296605 ID=Msa0304920-mRNA-1:cds;Parent=Msa0304920-mRNA-1
chr2_3 CDS 62295550 62295636 62295550 ID=Msa0304920-mRNA-1:cds;Parent=Msa0304920-mRNA-1
chr2_3 CDS 62295292 62295400 62295292 ID=Msa0304920-mRNA-1:cds;Parent=Msa0304920-mRNA-1
chr2_3 CDS 62294513 62295171 62294513 ID=Msa0304920-mRNA-1:cds;Parent=Msa0304920-mRNA-1
chr2_3 CDS 62292978 62293142 62292978 ID=Msa0304920-mRNA-1:cds;Parent=Msa0304920-mRNA-1
chr2_3 CDS 62292655 62292897 62292655 ID=Msa0304920-mRNA-1:cds;Parent=Msa0304920-mRNA-1
chr2_3 CDS 62292155 62292370 62292155 ID=Msa0304920-mRNA-1:cds;Parent=Msa0304920-mRNA-1
chr2_3 CDS 62291398 62291640 62291398 ID=Msa0304920-mRNA-1:cds;Parent=Msa0304920-mRNA-1
chr2_3 three_prime_UTR 62291206 62291397 62291206 ID=Msa0304920-mRNA-1:three_prime_utr;Parent=Msa0304920-mRNA-1
Gene Sequence

>Msa0304920

ATGCATCCATACGCATATGATTTATCACCTTTGATGAACGATATCAGCTACACTACTTACCCATATCCTGAACAAGAAGATGATGATTATAACTATCTCAGTCCACTCGGAAACGACGCCGTTTCTGAAACACCTTCTCCTCTTCCTCTTGGTATGGATTGGAGTCCACCACCACCTAATTGGAACGGTCCCGCCACTCTCTGGCCCCACACCTCTTCTTCTTCTTGGACTTTCTCTTCCACCATTCCTTCTTGGCTTCTTGTTCCTCAATCCTCTCCTTCTTCTTCTTCTTCTGATCCCGTCGTGCTGAAAAAGGAATTTCCCATGAAATACCTGCCTTCGCCACCACCGAAAAAGATATTGAGAATTAAAAGTGAAGCTCTTTTGGAAGAGCGACGGCGTTTATTAGAGGATTGGATGAAAAAATTGTTATCCGATATTTCTGTATCGAGAAGTGCACCAGCAGCAATTTTTCTTGAGTTAGAAGCTGCTGCTAGAGCATCATTTCACGATACGAATCAGCCTATTTCAGATGAACAGACGTCTGGTGGTACTACACCATCACATAGGACCCAAGATGGTTCACATGGTTATGTTAAAGCTCGTGGTTCATCTGCTGCATCTGTTTCTGGTGATGATACCCCTTCTGAGGTTTCTGAGCTGGGAACACCGAGGCATGAAAAATATGAAAGTTCTGATCATATTGCGGACAACTTAACATCGGGGCGTGACTTAATTCATCCAACTGAAACAAGTGTTGATCATGCTGCATCCAGCCAAGACTTTACTAATGAGGATAATAGTACAGACAAGGTCACTGAGAATTCTGGTGATACTATAGCTCTTCGCCTAGATGGAGCCGACTTCACACCAGCTAATGCTCATGTCAAAAGACCGTCAACAGAAAACATTGGAAGTGACTTAACGTCGAGTTCAGCTGTGTCAACTTTGCTTCAGGATGTTTCGCATGACCTTCCTGGGAGCCATGTATCCTCTGGAAACTCAGATTTGTTATTGACTTTTCCATTGGATGAGCGACACAAGTTGAACAGAATTATTAATACCCAGAAGCAGAGACTAGCCACGGCAAAAACGGATGTTGAAGATCTTGTAGCAAGATTGAATCAAGAAATGGCTGCAAGACAATATCTTGTGACAAAGGTCAAAGATTTGGAAGTTGAACTTGAAACAACTCAACTGAACTGCAGAGAAAACATGCAGCAGGCTGTTTTAACCGAAAAGGAAAGGTTTACACAAATGCAGTGGGATATGGAGGAACTTCGGAGGAAGTGCCTCGAGACAGAAATGAAATTGAAGTTTGAAGAGGATGAAAGGTTGCTAGCGGAATCTACAAAAGCATCCGTTGTTCAGGAGAAGCAAATGTTGCAGCAAGAGCTAGATGTGGCTAGAGAACAACTTAAGCACTTGCAGAAACATCATGATGAGTTTGAGATGAAATCAAAGACAGATATGAAGTTGCTAATAAAGGAAGTGAAATCCCTCAGAAGCTCTCAGTTAGAACTAAAGCAACAGCTCAGCGAATTGATGGAGGAAAAAGTAGATGTGGAGAGAACTCTTCAGAAGGAAAAGGAAAGAATACAGCTTTCACATGATGCTAATGCAAAGTTGTTGCATGAGTGTGCAATCCTTCAGAAGAGGCTTCAAGAGTGCAGTGTAAATTTTCTTGTTGAAGAGGAAGATAAACTAAATGTTGATACTTCACCATCTGATGCTTTGGATTTGTTAGCAACATCAGATAATCGGATTGGTCTCTTGCTTGCAGAGGCACAGCTCTTGGCACAAGATGTAGAAAATGTTGTGGATGCTGCGGAAGGATATACAACTACAGATGATACTGGGACAACTAATGAAGAATTAAGGAAAATGCTGGCTAATATTTTTGTAGACAATGCCAGTTTAAGGAAACAAGTCAATTCTGTTATCCGCCGTGCTCTCAAATCCGAGGAGAATGAGGAAGATGAAATCCATTTGCAAAAAACTTTTCTAAGCAAGTTCTTAGAGAGATAA

Protein sequence

>Msa0304920

MHPYAYDLSPLMNDISYTTYPYPEQEDDDYNYLSPLGNDAVSETPSPLPLGMDWSPPPPNWNGPATLWPHTSSSSWTFSSTIPSWLLVPQSSPSSSSSDPVVLKKEFPMKYLPSPPPKKILRIKSEALLEERRRLLEDWMKKLLSDISVSRSAPAAIFLELEAAARASFHDTNQPISDEQTSGGTTPSHRTQDGSHGYVKARGSSAASVSGDDTPSEVSELGTPRHEKYESSDHIADNLTSGRDLIHPTETSVDHAASSQDFTNEDNSTDKVTENSGDTIALRLDGADFTPANAHVKRPSTENIGSDLTSSSAVSTLLQDVSHDLPGSHVSSGNSDLLLTFPLDERHKLNRIINTQKQRLATAKTDVEDLVARLNQEMAARQYLVTKVKDLEVELETTQLNCRENMQQAVLTEKERFTQMQWDMEELRRKCLETEMKLKFEEDERLLAESTKASVVQEKQMLQQELDVAREQLKHLQKHHDEFEMKSKTDMKLLIKEVKSLRSSQLELKQQLSELMEEKVDVERTLQKEKERIQLSHDANAKLLHECAILQKRLQECSVNFLVEEEDKLNVDTSPSDALDLLATSDNRIGLLLAEAQLLAQDVENVVDAAEGYTTTDDTGTTNEELRKMLANIFVDNASLRKQVNSVIRRALKSEENEEDEIHLQKTFLSKFLER*