AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0623220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0623220 MtrunA17_Chr1g0212891 99.341 1214 8 0 1 1214 1 1214 0.0 2492
Msa0623220 MtrunA17_Chr4g0064451 81.811 1226 145 11 1 1214 1 1160 0.0 2008
Msa0623220 MtrunA17_Chr4g0064641 87.300 1000 88 3 222 1214 133 1100 0.0 1796
Msa0623220 MtrunA17_Chr4g0064641 86.047 129 15 1 1 126 1 129 7.44e-62 231
Msa0623220 MtrunA17_Chr6g0453861 86.913 298 22 2 515 812 1 281 4.59e-175 517
Msa0623220 MtrunA17_Chr6g0453871 95.480 177 8 0 831 1007 1 177 7.24e-114 352
Msa0623220 MtrunA17_Chr6g0453881 97.419 155 4 0 1056 1210 22 176 1.12e-100 317
Msa0623220 MtrunA17_Chr8g0381071 23.127 1241 764 36 1 1209 3 1085 8.22e-67 246
Msa0623220 MtrunA17_Chr7g0268421 21.545 492 291 15 389 798 447 925 1.01e-21 102
Msa0623220 MtrunA17_Chr2g0291081 21.749 446 289 12 393 805 309 727 2.86e-17 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0623220 AT3G55220.1 87.397 1214 153 0 1 1214 1 1214 0.0 2243
Msa0623220 AT3G55200.1 87.397 1214 153 0 1 1214 1 1214 0.0 2243
Msa0623220 AT3G55200.3 87.397 1214 153 0 1 1214 1 1214 0.0 2243
Msa0623220 AT3G55200.2 87.397 1214 153 0 1 1214 1 1214 0.0 2243
Msa0623220 AT4G21100.1 23.848 1237 759 35 1 1209 3 1084 5.87e-68 250
Msa0623220 AT4G05420.1 23.763 1233 759 36 4 1209 6 1084 2.20e-65 242
Msa0623220 AT4G05420.2 23.644 1235 737 37 4 1209 6 1063 4.45e-63 234
Msa0623220 AT3G11960.2 24.954 541 302 21 351 798 343 872 1.35e-23 108
Msa0623220 AT3G11960.4 24.954 541 302 21 351 798 401 930 1.53e-23 108
Msa0623220 AT3G11960.1 24.954 541 302 21 351 798 401 930 1.59e-23 108
Msa0623220 AT3G11960.3 24.954 541 302 21 351 798 401 930 1.59e-23 108

Find 366 sgRNAs with CRISPR-Local

Find 461 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAATTTCTTCCACCTTAT+TGG 0.107277 4_3:+425942 None:intergenic
CACCAATCAGGCTGCCTATT+TGG 0.116798 4_3:-424787 Msa0623220:three_prime_UTR
TCTTGCTCTTAGTCAGTTTC+AGG 0.121560 4_3:-426707 Msa0623220:CDS
GAGATACATGGTTTAGTTTA+TGG 0.132454 4_3:+429561 None:intergenic
CCATGGTCTGTATCAGTTTA+AGG 0.147073 4_3:-428495 Msa0623220:CDS
CACTTATCTGATTCAGCTTT+TGG 0.165187 4_3:+426994 None:intergenic
GCTGCTCAAGCTGGGGAAAA+TGG 0.168763 4_3:-427099 Msa0623220:CDS
GTTTATGGAAAACGAGAAAT+TGG 0.183165 4_3:+429576 None:intergenic
CATGCTTTCTTCACTTTGTT+AGG 0.202085 4_3:+424963 None:intergenic
GATACTCGATCCCGATTCTT+AGG 0.218899 4_3:-427501 Msa0623220:CDS
AAAATTCATCAAGAGACTTT+TGG 0.219654 4_3:-429250 Msa0623220:CDS
TTGTGATAGCAAAATAAAAT+AGG 0.227316 4_3:-429693 Msa0623220:five_prime_UTR
CTGACCTTCATATCAGTAAT+TGG 0.227439 4_3:+428338 None:intergenic
ACAGGTTGTATTTCCTGTTT+TGG 0.235680 4_3:+426945 None:intergenic
GACATTCTATGAGCTTGATT+TGG 0.239393 4_3:-428927 Msa0623220:CDS
TCCAGCAGTTAAACTCCTTT+TGG 0.249420 4_3:+426807 None:intergenic
ACGCTTTCCTCTTACAATAA+TGG 0.255451 4_3:+427455 None:intergenic
CGCTTTCCTCTTACAATAAT+GGG 0.256574 4_3:+427456 None:intergenic
AGGAAATACAACCTGTCTTT+TGG 0.256892 4_3:-426938 Msa0623220:CDS
TCCCTTTCGGTTTCTTTGAT+AGG 0.272046 4_3:-428041 Msa0623220:CDS
TGTTCTCAGGCTATATGATT+TGG 0.274280 4_3:-426659 Msa0623220:CDS
CATATGAAAGGGGTGTTAAA+AGG 0.275163 4_3:+427376 None:intergenic
CAAACGGTATTAGGCATATC+AGG 0.275629 4_3:-427992 Msa0623220:CDS
AATTTGCTTGTTACTGTTCC+TGG 0.282122 4_3:-428854 Msa0623220:CDS
ACAATTTCTTCCACCTTATT+GGG 0.286302 4_3:+425943 None:intergenic
TTTGCAATTGTCCTCTTTCC+AGG 0.290931 4_3:+427939 None:intergenic
CTAGTAACTTAGTACTTCTT+TGG 0.294381 4_3:-424822 Msa0623220:three_prime_UTR
GCGCTAGTCAAATGTTGATA+TGG 0.294873 4_3:-425117 Msa0623220:intron
ACCAATCAGGCTGCCTATTT+GGG 0.299150 4_3:-424786 Msa0623220:three_prime_UTR
GGAAGATTACTTGCAGGATT+AGG 0.309171 4_3:-426685 Msa0623220:CDS
GAAAACGAGAAATTGGGATT+AGG 0.309803 4_3:+429583 None:intergenic
CCCCTCTCTGATGAGCATTA+TGG 0.314592 4_3:-427021 Msa0623220:CDS
TAGATTAGGTATACCTTAAC+AGG 0.323064 4_3:+425694 None:intergenic
AAGTTCATCCAAACGGTATT+AGG 0.325887 4_3:-428001 Msa0623220:CDS
TCAAGGAAAAGAAGCGATTC+TGG 0.327003 4_3:+427648 None:intergenic
AAAACGAGAAATTGGGATTA+GGG 0.327083 4_3:+429584 None:intergenic
CTTTGTCTGCCTTCAGGCAC+TGG 0.331981 4_3:+427777 None:intergenic
ACATTCTATGAGCTTGATTT+GGG 0.332941 4_3:-428926 Msa0623220:CDS
GTCTGGTGATGTTGCTTGTT+TGG 0.334942 4_3:-427808 Msa0623220:CDS
GTATACCTTAACAGGAAAAT+AGG 0.337995 4_3:+425702 None:intergenic
CTGGATTTATTCATATATAT+AGG 0.342989 4_3:-426789 Msa0623220:CDS
GTCTAGAACCGTGGTGGATA+TGG 0.343885 4_3:-427541 Msa0623220:CDS
CGGGATCTTTGTCTGCCTTC+AGG 0.344846 4_3:+427771 None:intergenic
CACCACCAAAAGTTTCCGTT+TGG 0.349636 4_3:+427188 None:intergenic
ATCAGGGGCATCCGGATGTT+AGG 0.353056 4_3:-428772 Msa0623220:CDS
CGAGTACGGTGATATCTTTA+AGG 0.353137 4_3:-428645 Msa0623220:CDS
TCAATGTGTGTGCTCAAGTC+GGG 0.354836 4_3:-428548 Msa0623220:CDS
AGCAGGCAAATCAGCACGTC+TGG 0.360174 4_3:+428739 None:intergenic
ATGGCAGGTGCGGACAAGTT+TGG 0.360544 4_3:-426069 Msa0623220:CDS
CCTCCCCGCCATTCTCCATT+TGG 0.360562 4_3:+427061 None:intergenic
ATCGTTGTCGGTTCCGATTC+CGG 0.363435 4_3:-429319 Msa0623220:CDS
TTGTTTGCGGCGTCTGAGTT+TGG 0.365945 4_3:-428521 Msa0623220:CDS
TGTATCAGTTTAAGGGAATA+GGG 0.366882 4_3:-428487 Msa0623220:CDS
CCGGTATACCTAGTGCTGTT+TGG 0.366905 4_3:-428196 Msa0623220:CDS
GTTCTCAGGCTATATGATTT+GGG 0.367050 4_3:-426658 Msa0623220:CDS
CAATAATGGGAAACAGCTTC+GGG 0.367514 4_3:+427469 None:intergenic
AAGACAAATAAATCCCAAAT+AGG 0.368963 4_3:+424773 None:intergenic
TGAATTCGACCGTTGTCGTC+GGG 0.371104 4_3:+429421 None:intergenic
CTGTTTCCCATTATTGTAAG+AGG 0.371337 4_3:-427462 Msa0623220:CDS
TGTGATAGCAAAATAAAATA+GGG 0.375147 4_3:-429692 Msa0623220:five_prime_UTR
CTGTATCAGTTTAAGGGAAT+AGG 0.375822 4_3:-428488 Msa0623220:CDS
GCATCTGTTGGCGGTGAGGA+TGG 0.386597 4_3:-427618 Msa0623220:CDS
ACAATAATGGGAAACAGCTT+CGG 0.388090 4_3:+427468 None:intergenic
GAGGATCTTGAGAACAGGTT+TGG 0.390845 4_3:-428249 Msa0623220:CDS
GGACACTACTCCCTCCCTTT+CGG 0.391896 4_3:-428054 Msa0623220:CDS
TTTCAGGGAAGATTACTTGC+AGG 0.393367 4_3:-426691 Msa0623220:CDS
GCCGGAGAAGTTGCCGTTGA+TGG 0.395817 4_3:+429498 None:intergenic
GCAACCCAAACGGAAACTTT+TGG 0.398492 4_3:-427193 Msa0623220:CDS
TTCAAGGGTTTCATATGAAA+GGG 0.399706 4_3:+427365 None:intergenic
ATGCTTTCTTCACTTTGTTA+GGG 0.400330 4_3:+424964 None:intergenic
CAGGATTAGGACCTGTTCTC+AGG 0.402109 4_3:-426672 Msa0623220:CDS
GGAGAATGGCGGGGAGGATG+AGG 0.403218 4_3:-427055 Msa0623220:CDS
ATTCTCTCTGTTGAAGTCTT+CGG 0.403266 4_3:-429394 Msa0623220:CDS
CATGGTCTGTATCAGTTTAA+GGG 0.404009 4_3:-428494 Msa0623220:CDS
CAACAGATGCTTGAACTTCA+AGG 0.404934 4_3:+427631 None:intergenic
AGTTGGGTCGAATAGACTTC+AGG 0.406260 4_3:-427916 Msa0623220:CDS
CAGAAGGATTTCATCGTTGT+CGG 0.407062 4_3:-429331 Msa0623220:CDS
GCTGAATGGAGCTCCCAATA+AGG 0.407221 4_3:-425956 Msa0623220:CDS
CAAAAGCTGAATCAGATAAG+TGG 0.407316 4_3:-426993 Msa0623220:CDS
CGGCAACTTCTCCGGCGGTA+AGG 0.410147 4_3:-429491 Msa0623220:CDS
CCCGTCTATACTTGCAGTAA+TGG 0.412306 4_3:+426172 None:intergenic
CTGCTCAAGCTGGGGAAAAT+GGG 0.413867 4_3:-427098 Msa0623220:CDS
TGGGAGGATCAAGTGGGAGC+AGG 0.415443 4_3:-425983 Msa0623220:CDS
TGAATAGAGACAATTGTGTT+GGG 0.418831 4_3:+426595 None:intergenic
GCAAACCAGCGTTCAGGAAA+AGG 0.418899 4_3:+427577 None:intergenic
AGAATTCTTGATCCCAAAAC+AGG 0.420804 4_3:-426958 Msa0623220:CDS
AAGAGGACAATTGCAAAAGT+TGG 0.422719 4_3:-427933 Msa0623220:CDS
AATCATAACAGCTCTACCTT+TGG 0.426059 4_3:+429177 None:intergenic
TTTATGGAAAACGAGAAATT+GGG 0.426367 4_3:+429577 None:intergenic
TGCAGATCCATTGGTAATGT+TGG 0.427201 4_3:+425398 None:intergenic
GATGAATTGGACAGGACCCC+TGG 0.427518 4_3:-425362 Msa0623220:CDS
AGTTTCTTCAGTATTTCTCC+AGG 0.428293 4_3:+425344 None:intergenic
ACACACATTGAAGAAGTAAC+AGG 0.429037 4_3:+428560 None:intergenic
ACTGTTCCTGGTGGTGCTGA+TGG 0.430415 4_3:-428842 Msa0623220:CDS
ATCATAACAGCTCTACCTTT+GGG 0.430670 4_3:+429178 None:intergenic
GGATTACTCTGAGGCCGATC+AGG 0.437053 4_3:-428990 Msa0623220:CDS
TTCGAGAAAGTGGTCTGATC+AGG 0.439223 4_3:-428891 Msa0623220:CDS
TGTCCCTCAGTTCACCAATC+AGG 0.439637 4_3:-424799 Msa0623220:three_prime_UTR
CTGATATGCCTAATACCGTT+TGG 0.441610 4_3:+427993 None:intergenic
GTGGACCTCGATCTTCTTTG+AGG 0.444046 4_3:-428268 Msa0623220:CDS
CTCATTTGGAGATGCATATG+AGG 0.446107 4_3:-425774 Msa0623220:CDS
TCTTTGAGGATCTTGAGAAC+AGG 0.446199 4_3:-428254 Msa0623220:CDS
AATAACAATCCTACCGGAAT+CGG 0.446658 4_3:+429306 None:intergenic
CATCTGTTGGCGGTGAGGAT+GGG 0.447167 4_3:-427617 Msa0623220:CDS
AAACCTTGTTAGGATTGATC+AGG 0.447236 4_3:-428375 Msa0623220:CDS
GGGGTCTCAATCCTAAGAAT+CGG 0.447794 4_3:+427490 None:intergenic
ACCACCAAAAGTTTCCGTTT+GGG 0.453593 4_3:+427189 None:intergenic
GAAGGTGTAGTTGCTGTTGC+TGG 0.455667 4_3:-427309 Msa0623220:CDS
ACTGTTAGTTTCATGCTTTG+TGG 0.455690 4_3:-424678 None:intergenic
TTTGTGTAGGATGTTATTGA+TGG 0.456962 4_3:-425440 Msa0623220:intron
CAGGTTGTTATTGCTCTAAA+CGG 0.457990 4_3:-427897 Msa0623220:CDS
AACCCTCTTCAGTTTCCATC+AGG 0.458606 4_3:+428432 None:intergenic
ATGGCAGTTTCCAAGCTTCC+CGG 0.458775 4_3:-428215 Msa0623220:CDS
ATTCAAGGGTTTCATATGAA+AGG 0.459170 4_3:+427364 None:intergenic
ATGAGCCAACAGCAAGAAAA+CGG 0.459614 4_3:+427751 None:intergenic
ATCTGTTGGCGGTGAGGATG+GGG 0.460428 4_3:-427616 Msa0623220:CDS
TCTGCCTGTCAAGTCGCCCT+TGG 0.460463 4_3:-427425 Msa0623220:CDS
TTCAATGTGTGTGCTCAAGT+CGG 0.460557 4_3:-428549 Msa0623220:CDS
GATGCCAATTACTGATATGA+AGG 0.461235 4_3:-428342 Msa0623220:CDS
TCAATTTGTGGTGTTGATTG+TGG 0.461499 4_3:-429046 Msa0623220:CDS
TTCCTTCTGCAGACCGAGTA+CGG 0.463354 4_3:-428659 Msa0623220:CDS
TCCCAAATAGGCAGCCTGAT+TGG 0.463657 4_3:+424785 None:intergenic
GTCGGGGCGAAGGAGATCTA+AGG 0.464154 4_3:+429438 None:intergenic
GTTGATGGCGCAGATGATTC+CGG 0.464267 4_3:+429513 None:intergenic
CAAGCCAAGGGCGACTTGAC+AGG 0.464307 4_3:+427421 None:intergenic
TTGAATAGAGACAATTGTGT+TGG 0.464403 4_3:+426594 None:intergenic
GGTTGCCGGAGAATTGTTCC+AGG 0.465028 4_3:-429220 Msa0623220:CDS
GCGTTCAGGAAAAGGCTAGC+AGG 0.465299 4_3:+427585 None:intergenic
GACCGTTGTCGTCGGGGCGA+AGG 0.466064 4_3:+429428 None:intergenic
TATGATGCGGTAAGCCATCT+TGG 0.466751 4_3:+426111 None:intergenic
GCAGATCCATTGGTAATGTT+GGG 0.469512 4_3:+425399 None:intergenic
TTAGCCGTTGGCACAGCAAA+GGG 0.471255 4_3:-426844 Msa0623220:CDS
CTTGAAGTTCAAGCATCTGT+TGG 0.471375 4_3:-427630 Msa0623220:CDS
GGAACAGTTATGGGAAGTAT+TGG 0.471836 4_3:-425841 Msa0623220:CDS
GGAAAGCACAAGGGTGGCAT+TGG 0.472592 4_3:+428118 None:intergenic
CATTCTGCAAACCAGCGTTC+AGG 0.472769 4_3:+427571 None:intergenic
CTAGCTCAGTTTCGTCTCAC+TGG 0.473732 4_3:-429358 Msa0623220:CDS
GACAGAAAGTGCAGACCAAA+TGG 0.475375 4_3:-427076 Msa0623220:CDS
CTGAACGCTGGTTTGCAGAA+TGG 0.476157 4_3:-427570 Msa0623220:CDS
GCCACCCTTGTGCTTTCCAT+TGG 0.476366 4_3:-428113 Msa0623220:CDS
CAGGATCCAGTGATAAGATT+CGG 0.476586 4_3:+427715 None:intergenic
CTTAAAGATATCACCGTACT+CGG 0.477254 4_3:+428646 None:intergenic
CTTGCTCTTAGTCAGTTTCA+GGG 0.477422 4_3:-426706 Msa0623220:CDS
TCAGGGGCATCCGGATGTTA+GGG 0.477535 4_3:-428771 Msa0623220:CDS
CTTCACTTTGTTAGGGAGCA+AGG 0.477697 4_3:+424971 None:intergenic
ATATAAGAATCAGGGGCATC+CGG 0.480286 4_3:-428780 Msa0623220:CDS
GGAGGATCAAGTGGGAGCAG+GGG 0.480502 4_3:-425981 Msa0623220:CDS
ATTAATGAGTGGAGAACTCC+TGG 0.480530 4_3:-427957 Msa0623220:CDS
CTGTCAAGTCGCCCTTGGCT+TGG 0.480711 4_3:-427420 Msa0623220:CDS
CCAAACAGCACTAGGTATAC+CGG 0.481385 4_3:+428196 None:intergenic
GGTTGCAGCACAAATTTCCT+AGG 0.481964 4_3:+427210 None:intergenic
GGATGTAACTGGTCAATTGA+TGG 0.484938 4_3:-427850 Msa0623220:CDS
TGGTCTGATCAGGTTGATAA+TGG 0.487293 4_3:-428881 Msa0623220:CDS
TTGAATTCGACCGTTGTCGT+CGG 0.489073 4_3:+429420 None:intergenic
GGGAGGATCAAGTGGGAGCA+GGG 0.490579 4_3:-425982 Msa0623220:CDS
AGAGTCTGCATACAATCATC+AGG 0.492699 4_3:+427696 None:intergenic
GCCATCAACGGCAACTTCTC+CGG 0.492815 4_3:-429499 Msa0623220:CDS
GGCAACTTCTCCGGCGGTAA+GGG 0.493570 4_3:-429490 Msa0623220:CDS
CATGGGGTTTCTCATTCATA+CGG 0.493766 4_3:-424944 Msa0623220:three_prime_UTR
TTTGGAGCTTCAGGATAATG+AGG 0.498161 4_3:-426920 Msa0623220:CDS
TGGGAGCAGGGGAAGCTGAA+TGG 0.498168 4_3:-425970 Msa0623220:CDS
AAAATGAGGCAGCAAATTCA+AGG 0.500144 4_3:+427349 None:intergenic
AAACTTGTCCGCACCTGCCA+TGG 0.500572 4_3:+426071 None:intergenic
CAACCTGATCAATCCTAACA+AGG 0.500777 4_3:+428372 None:intergenic
TCCATTACTGCAAGTATAGA+CGG 0.500792 4_3:-426173 Msa0623220:CDS
GGGATCAAGAATTCTGATGC+AGG 0.502138 4_3:+426966 None:intergenic
TGAGCCAACAGCAAGAAAAC+GGG 0.503097 4_3:+427752 None:intergenic
CAAGTCGGGGTTCTTGTTTG+CGG 0.503296 4_3:-428534 Msa0623220:CDS
TCGTCTCACTGGTGCTCAGA+AGG 0.503300 4_3:-429347 Msa0623220:CDS
CAGACCAAATGGAGAATGGC+GGG 0.503511 4_3:-427065 Msa0623220:CDS
GAAGACTTCAACAGAGAGAA+TGG 0.503853 4_3:+429396 None:intergenic
AAATCATATAGCCTGAGAAC+AGG 0.504962 4_3:+426661 None:intergenic
TTTGTGTGGAAGAGATCATA+TGG 0.505435 4_3:-425737 Msa0623220:CDS
TTAACCATGTTTCGAGAAAG+TGG 0.508168 4_3:-428901 Msa0623220:CDS
GGGTCTCAATCCTAAGAATC+GGG 0.509484 4_3:+427491 None:intergenic
GACTGCAATTTACGCCCAAA+AGG 0.509891 4_3:-426822 Msa0623220:CDS
AGTGAGATTGTAGAGATACA+TGG 0.511454 4_3:+429549 None:intergenic
GCCTCTCTTATACCAGGTGG+TGG 0.511589 4_3:-425880 Msa0623220:CDS
AAAGGTAGAGCTGTTATGAT+TGG 0.514655 4_3:-429175 Msa0623220:CDS
TTTGTTATATATAAGAATCA+GGG 0.515912 4_3:-428788 Msa0623220:CDS
CATCAGCAAATATGTAGAGT+TGG 0.516125 4_3:+426142 None:intergenic
CGTTGGAACATGAGGGTGAT+CGG 0.516194 4_3:-428619 Msa0623220:CDS
CGATCAGGATTCGACTGGTA+TGG 0.520010 4_3:-428975 Msa0623220:CDS
CAGACCACTTTCTCGAAACA+TGG 0.520109 4_3:+428897 None:intergenic
CTTCACTGTGACTGTGTGAG+TGG 0.522266 4_3:+429643 None:intergenic
GTTTCTTCAGTATTTCTCCA+GGG 0.524708 4_3:+425345 None:intergenic
GAGTTCTCCACTCATTAATA+CGG 0.525159 4_3:+427961 None:intergenic
AGAGGACAATTGCAAAAGTT+GGG 0.526698 4_3:-427932 Msa0623220:CDS
CAGTGAGACGAAACTGAGCT+AGG 0.527611 4_3:+429359 None:intergenic
CTTCACAAAACTCAGGTTGA+AGG 0.527835 4_3:-426736 Msa0623220:CDS
TTTGGAGATGCATATGAGGC+AGG 0.529151 4_3:-425770 Msa0623220:CDS
TGTGATCTCATGCCTGCAAA+AGG 0.529541 4_3:-425902 Msa0623220:CDS
ACTAGGTATACCGGGAAGCT+TGG 0.532377 4_3:+428205 None:intergenic
ATCAAGAATAACAATCCTAC+CGG 0.532496 4_3:+429300 None:intergenic
CTCATGCAAGTTCATCCAAA+CGG 0.533265 4_3:-428008 Msa0623220:CDS
ATCCTGAAGCTCCAAAAGAC+AGG 0.533653 4_3:+426927 None:intergenic
TGTGACTGTGTGAGTGGAGC+GGG 0.534051 4_3:+429649 None:intergenic
TTAAGAAATGATCATTAGAG+AGG 0.534715 4_3:-425297 Msa0623220:intron
CCCAAAAGGAGTTTAACTGC+TGG 0.535933 4_3:-426808 Msa0623220:CDS
CCATTACTGCAAGTATAGAC+GGG 0.536221 4_3:-426172 Msa0623220:CDS
TGCTGCTATGCATAAACTGA+AGG 0.538015 4_3:-428693 Msa0623220:CDS
ACTCACCTGGAACAATTCTC+CGG 0.538585 4_3:+429215 None:intergenic
GAAGTTCAAGCATCTGTTGG+CGG 0.538634 4_3:-427627 Msa0623220:CDS
TGTTACTTGAGTAAGCCGTT+TGG 0.539518 4_3:-424994 Msa0623220:three_prime_UTR
GTGTTAAAAGGAAGTGTCCT+TGG 0.539650 4_3:+427388 None:intergenic
CTGATGATTGCGTTCCAAGA+TGG 0.539804 4_3:-426125 Msa0623220:CDS
GGAATCACAGCCCTAACATC+CGG 0.542691 4_3:+428761 None:intergenic
TATCCACCACGGTTCTAGAC+AGG 0.542736 4_3:+427544 None:intergenic
TAAGGCTACGTTGGAACATG+AGG 0.542754 4_3:-428627 Msa0623220:CDS
ATATATAGGTTTCTAGAGGA+TGG 0.542765 4_3:-426775 Msa0623220:CDS
TTTAGCCGTTGGCACAGCAA+AGG 0.542918 4_3:-426845 Msa0623220:CDS
CAAAAGGCCTCTCTTATACC+AGG 0.543076 4_3:-425886 Msa0623220:CDS
GACAATCCGAATCTTATCAC+TGG 0.544039 4_3:-427721 Msa0623220:CDS
ACCATAATGCTCATCAGAGA+GGG 0.544734 4_3:+427020 None:intergenic
GTGGAGAAGCATGAAATGTC+TGG 0.546011 4_3:-427825 Msa0623220:CDS
TGTTAGGGAGCAAGGCCAAA+CGG 0.546455 4_3:+424979 None:intergenic
CTCACTCTTCAACGACCCAC+CGG 0.547556 4_3:-429532 Msa0623220:CDS
TTTCTTCAGTATTTCTCCAG+GGG 0.548741 4_3:+425346 None:intergenic
GACATTGCTCCAGTGCCTGA+AGG 0.549279 4_3:-427786 Msa0623220:CDS
TTCCATCAGGCTCGCAGACG+AGG 0.554048 4_3:+428445 None:intergenic
GAAATTGTACAATTTCATGT+TGG 0.555672 4_3:-425928 Msa0623220:CDS
TTTGTGCAGGTGTTGGCGAA+AGG 0.556137 4_3:-425022 Msa0623220:intron
GGCCTCGTCTGCGAGCCTGA+TGG 0.558067 4_3:-428447 Msa0623220:CDS
ACCGTGGTGGATATGGTCAC+AGG 0.558712 4_3:-427534 Msa0623220:CDS
GAGATAGAAGAGGATCCTAC+TGG 0.558794 4_3:-426006 Msa0623220:CDS
TTGTTATTGCTCTAAACGGA+GGG 0.559271 4_3:-427893 Msa0623220:CDS
AGTGGAGAACTCCTGGAAAG+AGG 0.561736 4_3:-427950 Msa0623220:CDS
GTGGTGATTGAGAGTGATCA+AGG 0.562419 4_3:-427171 Msa0623220:CDS
GAATAGAGACAATTGTGTTG+GGG 0.562664 4_3:+426596 None:intergenic
TACCGTGATCGAATTTATGT+TGG 0.567908 4_3:-426568 Msa0623220:CDS
CAGTCCCTTTGCTGTGCCAA+CGG 0.568057 4_3:+426840 None:intergenic
ACCTATCAAAGAAACCGAAA+GGG 0.568715 4_3:+428040 None:intergenic
CAGAAGAGCGTGAAGCTGCA+AGG 0.569941 4_3:-427137 Msa0623220:CDS
CACCTATCAAAGAAACCGAA+AGG 0.569957 4_3:+428039 None:intergenic
TGAAACTGACTAAGAGCAAG+AGG 0.570088 4_3:+426709 None:intergenic
TTCCTAGGCGTGTATCTAAG+TGG 0.571777 4_3:+427225 None:intergenic
AATTTGTGCTGCAACCCAAA+CGG 0.572113 4_3:-427203 Msa0623220:CDS
CACCGTACTCGGTCTGCAGA+AGG 0.573412 4_3:+428657 None:intergenic
AAATTGCTGATGAATTGGAC+AGG 0.573426 4_3:-425370 Msa0623220:CDS
AACTGGTCAATTGATGGAGG+TGG 0.575888 4_3:-427844 Msa0623220:CDS
CTAACAAAGTGAAGAAAGCA+TGG 0.576307 4_3:-424962 Msa0623220:three_prime_UTR
GATGATTGTATGCAGACTCT+AGG 0.576719 4_3:-427693 Msa0623220:CDS
CGTTCAGGAAAAGGCTAGCA+GGG 0.576888 4_3:+427586 None:intergenic
CAGCCTGATTGGTGAACTGA+GGG 0.578746 4_3:+424796 None:intergenic
AGGTTTGGCTGTCAGTGAGA+TGG 0.579043 4_3:-428234 Msa0623220:CDS
ATAAGAACACCACGCTCAGC+AGG 0.579277 4_3:+428722 None:intergenic
TGAACTACTTCACAAAACTC+AGG 0.579866 4_3:-426743 Msa0623220:CDS
AAGTGGAGTTCTTGTTTGTG+CGG 0.581572 4_3:-428816 Msa0623220:CDS
AGAAATACTGAAGAAACTTG+AGG 0.583807 4_3:-425339 Msa0623220:CDS
TTCTTCGACTGTCTCACCAA+TGG 0.584841 4_3:+428097 None:intergenic
GCAGGCAAATCAGCACGTCT+GGG 0.586042 4_3:+428740 None:intergenic
ATGGGGTTTCTCATTCATAC+GGG 0.586235 4_3:-424943 Msa0623220:three_prime_UTR
AGTGCAGACCAAATGGAGAA+TGG 0.586246 4_3:-427069 Msa0623220:CDS
TGATATCTTTAAGGCTACGT+TGG 0.586642 4_3:-428636 Msa0623220:CDS
AAAAGCTGAATCAGATAAGT+GGG 0.587805 4_3:-426992 Msa0623220:CDS
TTCACAGTCCAAACAGCACT+AGG 0.590414 4_3:+428188 None:intergenic
CTATGCATAAACTGAAGGGT+GGG 0.590795 4_3:-428688 Msa0623220:CDS
CTTGGTCCATCAGCACCACC+AGG 0.590970 4_3:+428836 None:intergenic
GAGCCTGATGGAAACTGAAG+AGG 0.592145 4_3:-428435 Msa0623220:CDS
GCTGATTTGCCTGCTGAGCG+TGG 0.592203 4_3:-428731 Msa0623220:CDS
ATTAGGCATATCAGGGAGGA+TGG 0.594759 4_3:-427984 Msa0623220:CDS
GAGGCCGATCAGGATTCGAC+TGG 0.595755 4_3:-428980 Msa0623220:CDS
TTGTGTAGGATGTTATTGAT+GGG 0.596283 4_3:-425439 Msa0623220:intron
TGGTGAATGTAACCAAGCCA+AGG 0.597932 4_3:+427408 None:intergenic
AACATAAATTCGATCACGGT+AGG 0.599144 4_3:+426570 None:intergenic
TGTAGTTGCTGTTGCTGGTG+AGG 0.599449 4_3:-427304 Msa0623220:CDS
GGTTTCTCATTCATACGGGA+AGG 0.600563 4_3:-424939 Msa0623220:three_prime_UTR
TCATATATATAGGTTTCTAG+AGG 0.601291 4_3:-426779 Msa0623220:CDS
GAATTCGACCGTTGTCGTCG+GGG 0.601670 4_3:+429422 None:intergenic
TGAATAGAGATACTGCTGCT+AGG 0.602594 4_3:-429120 Msa0623220:CDS
GTCGAAGAAGTCAGTGACAG+TGG 0.603224 4_3:-428083 Msa0623220:CDS
TTGTCGGTTCCGATTCCGGT+AGG 0.603626 4_3:-429315 Msa0623220:CDS
CTACTGGTGGGAGGATCAAG+TGG 0.603845 4_3:-425990 Msa0623220:CDS
AAGGCTACGTTGGAACATGA+GGG 0.604063 4_3:-428626 Msa0623220:CDS
TCATCTGACCAATGTGTGGA+AGG 0.604252 4_3:-427327 Msa0623220:CDS
TAACAAAGTGAAGAAAGCAT+GGG 0.604497 4_3:-424961 Msa0623220:three_prime_UTR
GGAATCATCTGCGCCATCAA+CGG 0.605191 4_3:-429511 Msa0623220:CDS
CCTTAAACTGATACAGACCA+TGG 0.608246 4_3:+428495 None:intergenic
CAAACAGCACTAGGTATACC+GGG 0.608706 4_3:+428197 None:intergenic
TTGTTATATATAAGAATCAG+GGG 0.609507 4_3:-428787 Msa0623220:CDS
TTCTCATTCATACGGGAAGG+CGG 0.611144 4_3:-424936 Msa0623220:three_prime_UTR
TTGCTTGTTACTGTTCCTGG+TGG 0.611338 4_3:-428851 Msa0623220:CDS
CAATGTGTGTGCTCAAGTCG+GGG 0.611721 4_3:-428547 Msa0623220:CDS
TCAAGGGTTTCATATGAAAG+GGG 0.612132 4_3:+427366 None:intergenic
CTCCTTCGCCCCGACGACAA+CGG 0.612862 4_3:-429430 Msa0623220:CDS
TTATGTTGGTGACATTCAAG+AGG 0.615248 4_3:-426554 Msa0623220:intron
GCAATTCCCAACATTACCAA+TGG 0.615421 4_3:-425405 Msa0623220:CDS
AAAATGCACTCTCCACCACC+TGG 0.615658 4_3:+425868 None:intergenic
GCGTCTGAGTTTGGAAACCA+TGG 0.616506 4_3:-428512 Msa0623220:CDS
TGTGATTTATGAGCTTCTAA+CGG 0.616598 4_3:+429082 None:intergenic
CAAGAAATCGTCGTCGCCAG+AGG 0.617225 4_3:-429466 Msa0623220:CDS
ACATTGGTCAGATGAAAATG+AGG 0.617656 4_3:+427335 None:intergenic
GGTCAGCAATCTGTTTGAAG+AGG 0.618125 4_3:-428321 Msa0623220:CDS
CAGGATAATCCACCTTTGTG+TGG 0.618306 4_3:-425751 Msa0623220:CDS
AATAGGGGATGATGATGATG+TGG 0.618832 4_3:-428471 Msa0623220:CDS
CAACTACACCTTCCACACAT+TGG 0.622894 4_3:+427319 None:intergenic
GTATCAGTTTAAGGGAATAG+GGG 0.623605 4_3:-428486 Msa0623220:CDS
TATCAAAGAAACCGAAAGGG+AGG 0.624663 4_3:+428043 None:intergenic
TGTGTAGGATGTTATTGATG+GGG 0.626687 4_3:-425438 Msa0623220:intron
TGATCTCTTCCACACAAAGG+TGG 0.626831 4_3:+425742 None:intergenic
TCTACAGCAATATACTCACC+TGG 0.627025 4_3:+429202 None:intergenic
TCTCACCAATGGAAAGCACA+AGG 0.627318 4_3:+428108 None:intergenic
AAATGAGGCAGCAAATTCAA+GGG 0.628031 4_3:+427350 None:intergenic
ACCAATGGAAAGCACAAGGG+TGG 0.628099 4_3:+428112 None:intergenic
TCAAGCATCTGTTGGCGGTG+AGG 0.629370 4_3:-427622 Msa0623220:CDS
ATAGAAGAGGATCCTACTGG+TGG 0.629808 4_3:-426003 Msa0623220:CDS
GAATGGAGCTCCCAATAAGG+TGG 0.630059 4_3:-425953 Msa0623220:CDS
AGTGAGACGAAACTGAGCTA+GGG 0.632341 4_3:+429360 None:intergenic
AAGAAGTACTAAGTTACTAG+AGG 0.632636 4_3:+424825 None:intergenic
CATACCAGTCGAATCCTGAT+CGG 0.633405 4_3:+428976 None:intergenic
AAACGGTATTAGGCATATCA+GGG 0.636543 4_3:-427991 Msa0623220:CDS
GATGGCGCAGATGATTCCGG+TGG 0.636811 4_3:+429516 None:intergenic
CACCAACATAAATTCGATCA+CGG 0.637531 4_3:+426566 None:intergenic
TGTATCTGATGAGATAGAAG+AGG 0.638499 4_3:-426016 Msa0623220:CDS
ATCTCATCAGATACATCCTG+CGG 0.640738 4_3:+426024 None:intergenic
CACTTGATCCTCCCACCAGT+AGG 0.641173 4_3:+425991 None:intergenic
TACTGGTGGGAGGATCAAGT+GGG 0.642790 4_3:-425989 Msa0623220:CDS
ATCAAAGAAACCGAAAGGGA+GGG 0.644655 4_3:+428044 None:intergenic
TCGAAGAAGTCAGTGACAGT+GGG 0.645296 4_3:-428082 Msa0623220:CDS
AGCCTGATGGAAACTGAAGA+GGG 0.645359 4_3:-428434 Msa0623220:CDS
GCAGACCAAATGGAGAATGG+CGG 0.650077 4_3:-427066 Msa0623220:CDS
TGTTATTGCTCTAAACGGAG+GGG 0.650865 4_3:-427892 Msa0623220:CDS
GCACAAACAAGAACTCCACT+TGG 0.651009 4_3:+428818 None:intergenic
AGACCAAATGGAGAATGGCG+GGG 0.652748 4_3:-427064 Msa0623220:CDS
GGTGAATGTAACCAAGCCAA+GGG 0.653180 4_3:+427409 None:intergenic
TAGAAGAGGATCCTACTGGT+GGG 0.654087 4_3:-426002 Msa0623220:CDS
CATTGAAGAAGTAACAGGAA+TGG 0.657283 4_3:+428565 None:intergenic
TATTGAGTTGGATTACTCTG+AGG 0.657484 4_3:-428999 Msa0623220:CDS
GCTATGCATAAACTGAAGGG+TGG 0.658331 4_3:-428689 Msa0623220:CDS
TACCTTAACAGGAAAATAGG+CGG 0.658889 4_3:+425705 None:intergenic
AAGAGGATCCTACTGGTGGG+AGG 0.659185 4_3:-425999 Msa0623220:CDS
CTGTGACTGTGTGAGTGGAG+CGG 0.659673 4_3:+429648 None:intergenic
ATAATGGGAAACAGCTTCGG+GGG 0.660763 4_3:+427471 None:intergenic
ATGTTGGGAATTGCTCACAT+AGG 0.661639 4_3:+425414 None:intergenic
TATATTGCTGTAGATCCCAA+AGG 0.662200 4_3:-429193 Msa0623220:CDS
GCTGCTATGCATAAACTGAA+GGG 0.662832 4_3:-428692 Msa0623220:CDS
ATGGCGCAGATGATTCCGGT+GGG 0.663771 4_3:+429517 None:intergenic
TCCACCACCTGGTATAAGAG+AGG 0.664259 4_3:+425879 None:intergenic
GCAGCCTGATTGGTGAACTG+AGG 0.664886 4_3:+424795 None:intergenic
AACCATAATGCTCATCAGAG+AGG 0.666934 4_3:+427019 None:intergenic
GTTGTTATTGCTCTAAACGG+AGG 0.667721 4_3:-427894 Msa0623220:CDS
AGGATGGCCGTATTAATGAG+TGG 0.667784 4_3:-427968 Msa0623220:CDS
GGTGGTGCTGATGGACCAAG+TGG 0.668564 4_3:-428833 Msa0623220:CDS
ATCAACGGCAACTTCTCCGG+CGG 0.669744 4_3:-429496 Msa0623220:CDS
TGGTGTCCTGTCTAGAACCG+TGG 0.672484 4_3:-427550 Msa0623220:CDS
CCAAATGGAGAATGGCGGGG+AGG 0.674504 4_3:-427061 Msa0623220:CDS
GATTTCTTGACCCTTACCGC+CGG 0.674914 4_3:+429480 None:intergenic
AGGGGATGATGATGATGTGG+AGG 0.675506 4_3:-428468 Msa0623220:CDS
TTCCACTTAGATACACGCCT+AGG 0.676656 4_3:-427227 Msa0623220:CDS
AATAATGGGAAACAGCTTCG+GGG 0.677979 4_3:+427470 None:intergenic
TGGCTTGGTTACATTCACCA+AGG 0.678729 4_3:-427405 Msa0623220:CDS
CCATAATGCTCATCAGAGAG+GGG 0.680931 4_3:+427021 None:intergenic
CCATGGTGTCAAAATCTATG+TGG 0.684812 4_3:+426088 None:intergenic
CATAATGCTCATCAGAGAGG+GGG 0.685007 4_3:+427022 None:intergenic
AACAAAGTGAAGAAAGCATG+GGG 0.689891 4_3:-424960 Msa0623220:three_prime_UTR
CTCACCAATGGAAAGCACAA+GGG 0.694771 4_3:+428109 None:intergenic
AAGATCCTCAAAGAAGATCG+AGG 0.696463 4_3:+428263 None:intergenic
ACCTGTGACCATATCCACCA+CGG 0.703407 4_3:+427533 None:intergenic
ATATGATCTCTTCCACACAA+AGG 0.705374 4_3:+425739 None:intergenic
GTGGAGCGGGAACAATGCGG+AGG 0.707179 4_3:+429662 None:intergenic
AAGGCCTCTCTTATACCAGG+TGG 0.708767 4_3:-425883 Msa0623220:CDS
TGTCCTGTCTAGAACCGTGG+TGG 0.721061 4_3:-427547 Msa0623220:CDS
AAAATCTATGTGGTATGATG+CGG 0.724478 4_3:+426098 None:intergenic
TGTAACTGGTCAATTGATGG+AGG 0.727200 4_3:-427847 Msa0623220:CDS
CGGTATTAGGCATATCAGGG+AGG 0.747835 4_3:-427988 Msa0623220:CDS
TGAGTGGAGCGGGAACAATG+CGG 0.848433 4_3:+429659 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTTATATATAAGAATC+AGG - chr4_3:425593-425612 Msa0623220:intron 15.0%
!!! TTTGTTATATATAAGAATCA+GGG - chr4_3:425594-425613 Msa0623220:intron 15.0%
!!! ATTTTTACTATTGAAAGATT+AGG - chr4_3:427109-427128 Msa0623220:CDS 15.0%
!!! AATTTTCATGATAAAGAATA+CGG - chr4_3:427508-427527 Msa0623220:CDS 15.0%
!! GAAAATACAATAAATTACAA+CGG + chr4_3:427921-427940 None:intergenic 15.0%
!!! ATATTTGAATTTTACTAAAC+TGG - chr4_3:428002-428021 Msa0623220:CDS 15.0%
!!! AAATAGAACTTTCTTAATTT+TGG - chr4_3:428084-428103 Msa0623220:CDS 15.0%
!! CAAAAAATTAATACTATCTA+TGG + chr4_3:428903-428922 None:intergenic 15.0%
!!! AGTATTAATTTTTTGACAAA+CGG - chr4_3:428908-428927 Msa0623220:CDS 15.0%
!! CTAAAAATAAAGTCATAAAT+GGG + chr4_3:429489-429508 None:intergenic 15.0%
!! TCTAAAAATAAAGTCATAAA+TGG + chr4_3:429490-429509 None:intergenic 15.0%
!! TTGTGATAGCAAAATAAAAT+AGG - chr4_3:424689-424708 Msa0623220:three_prime_UTR 20.0%
!! TGTGATAGCAAAATAAAATA+GGG - chr4_3:424690-424709 Msa0623220:three_prime_UTR 20.0%
!! TTGTTATATATAAGAATCAG+GGG - chr4_3:425595-425614 Msa0623220:intron 20.0%
!! CTGGATTTATTCATATATAT+AGG - chr4_3:427593-427612 Msa0623220:CDS 20.0%
!!! GTTTCTTTAATATTTGAGTT+AGG - chr4_3:427877-427896 Msa0623220:CDS 20.0%
!! AAATTCAAATATTAACACTC+TGG + chr4_3:427994-428013 None:intergenic 20.0%
!!! ATATTTTTGAAACTTGACTA+AGG - chr4_3:428056-428075 Msa0623220:CDS 20.0%
!!! ATTTTATATGGAACAGTTAT+GGG - chr4_3:428532-428551 Msa0623220:CDS 20.0%
!! ATAATAACAGAAAGAATCAA+TGG + chr4_3:428721-428740 None:intergenic 20.0%
! TTTATGGAAAACGAGAAATT+GGG + chr4_3:424808-424827 None:intergenic 25.0%
!! AAAATTCATCAAGAGACTTT+TGG - chr4_3:425132-425151 Msa0623220:three_prime_UTR 25.0%
!! AAATTCATCAAGAGACTTTT+GGG - chr4_3:425133-425152 Msa0623220:three_prime_UTR 25.0%
!! TCATATATATAGGTTTCTAG+AGG - chr4_3:427603-427622 Msa0623220:CDS 25.0%
!! TATATGATTTGGGAAAAAGA+CGG - chr4_3:427734-427753 Msa0623220:CDS 25.0%
! AAATATAAAACAATCCCTTC+TGG + chr4_3:428042-428061 None:intergenic 25.0%
!! TTGGAAATATCTATTTTGTG+CGG - chr4_3:428332-428351 Msa0623220:CDS 25.0%
! GAAATTGTACAATTTCATGT+TGG - chr4_3:428454-428473 Msa0623220:CDS 25.0%
!! CATTTTATATGGAACAGTTA+TGG - chr4_3:428531-428550 Msa0623220:CDS 25.0%
!!! TGTTGATTTCTTTTCTCATT+TGG - chr4_3:428594-428613 Msa0623220:CDS 25.0%
! TCAATGGCATAATATAGATT+AGG + chr4_3:428705-428724 None:intergenic 25.0%
! TTAAGAAATGATCATTAGAG+AGG - chr4_3:429085-429104 Msa0623220:CDS 25.0%
! ATAGTACTGTTATGATTGAT+AGG - chr4_3:429147-429166 Msa0623220:CDS 25.0%
!!! AACAGATCATTTTTGAACAA+GGG - chr4_3:429233-429252 Msa0623220:CDS 25.0%
! ATTCGTCAAATCAAAATTCT+CGG + chr4_3:429317-429336 None:intergenic 25.0%
!!! TTTTTAGAGACAAATGTTAC+TGG - chr4_3:429502-429521 Msa0623220:CDS 25.0%
! AAGACAAATAAATCCCAAAT+AGG + chr4_3:429612-429631 None:intergenic 25.0%
! AAATTGGGATTAGGGTTTTA+GGG + chr4_3:424793-424812 None:intergenic 30.0%
AAAACGAGAAATTGGGATTA+GGG + chr4_3:424801-424820 None:intergenic 30.0%
GTTTATGGAAAACGAGAAAT+TGG + chr4_3:424809-424828 None:intergenic 30.0%
! GAGATACATGGTTTAGTTTA+TGG + chr4_3:424824-424843 None:intergenic 30.0%
ATCAAGAATAACAATCCTAC+CGG + chr4_3:425085-425104 None:intergenic 30.0%
TGTGATTTATGAGCTTCTAA+CGG + chr4_3:425303-425322 None:intergenic 30.0%
! ACTCTTGTGTTTTCAATTTG+TGG - chr4_3:425324-425343 Msa0623220:CDS 30.0%
AACTCAATAGCAGCAAAAAT+AGG + chr4_3:425372-425391 None:intergenic 30.0%
!! TATTTTTGCTGCTATTGAGT+TGG - chr4_3:425371-425390 Msa0623220:CDS 30.0%
ACATTCTATGAGCTTGATTT+GGG - chr4_3:425456-425475 Msa0623220:intron 30.0%
TGTATCAGTTTAAGGGAATA+GGG - chr4_3:425895-425914 Msa0623220:CDS 30.0%
CCACAAAGAGTAAAAATTTG+AGG + chr4_3:426092-426111 None:intergenic 30.0%
! CCTCAAATTTTTACTCTTTG+TGG - chr4_3:426089-426108 Msa0623220:CDS 30.0%
!! GGAGCTTATATATTTTGAAG+TGG - chr4_3:426511-426530 Msa0623220:intron 30.0%
!!! TATTTTGAAGTGGATGTAAC+TGG - chr4_3:426521-426540 Msa0623220:intron 30.0%
TTCAAGGGTTTCATATGAAA+GGG + chr4_3:427020-427039 None:intergenic 30.0%
ATTCAAGGGTTTCATATGAA+AGG + chr4_3:427021-427040 None:intergenic 30.0%
AAAAGCTGAATCAGATAAGT+GGG - chr4_3:427390-427409 Msa0623220:CDS 30.0%
! ATATATAGGTTTCTAGAGGA+TGG - chr4_3:427607-427626 Msa0623220:CDS 30.0%
TGAATAGAGACAATTGTGTT+GGG + chr4_3:427790-427809 None:intergenic 30.0%
TTGAATAGAGACAATTGTGT+TGG + chr4_3:427791-427810 None:intergenic 30.0%
! TTTTTATTAGAGCTCCAGAA+GGG - chr4_3:428025-428044 Msa0623220:CDS 30.0%
AAAATCTATGTGGTATGATG+CGG + chr4_3:428287-428306 None:intergenic 30.0%
ACAATTTCTTCCACCTTATT+GGG + chr4_3:428442-428461 None:intergenic 30.0%
TACAATTTCTTCCACCTTAT+TGG + chr4_3:428443-428462 None:intergenic 30.0%
GTATACCTTAACAGGAAAAT+AGG + chr4_3:428683-428702 None:intergenic 30.0%
TAGATTAGGTATACCTTAAC+AGG + chr4_3:428691-428710 None:intergenic 30.0%
CCATCAAGGAAAATATAACA+GGG + chr4_3:428793-428812 None:intergenic 30.0%
! CCTGTTATATTTTCCTTGAT+GGG - chr4_3:428791-428810 Msa0623220:CDS 30.0%
AATGAACAACACGAAATGTA+TGG + chr4_3:428866-428885 None:intergenic 30.0%
! TACATTTCGTGTTGTTCATT+TGG - chr4_3:428866-428885 Msa0623220:CDS 30.0%
GGAGTTCTATATATTTGTGT+AGG - chr4_3:428929-428948 Msa0623220:CDS 30.0%
TTTGTGTAGGATGTTATTGA+TGG - chr4_3:428942-428961 Msa0623220:CDS 30.0%
TTGTGTAGGATGTTATTGAT+GGG - chr4_3:428943-428962 Msa0623220:CDS 30.0%
GAGAAAAATTGCTGATGAAT+TGG - chr4_3:429007-429026 Msa0623220:CDS 30.0%
AGAAATACTGAAGAAACTTG+AGG - chr4_3:429043-429062 Msa0623220:CDS 30.0%
CTTGTTCAAAAATGATCTGT+TGG + chr4_3:429234-429253 None:intergenic 30.0%
!! CAACAGATCATTTTTGAACA+AGG - chr4_3:429232-429251 Msa0623220:CDS 30.0%
!! ACAGATCATTTTTGAACAAG+GGG - chr4_3:429234-429253 Msa0623220:CDS 30.0%
ATGCTTTCTTCACTTTGTTA+GGG + chr4_3:429421-429440 None:intergenic 30.0%
! TAACAAAGTGAAGAAAGCAT+GGG - chr4_3:429421-429440 Msa0623220:CDS 30.0%
!! AAGAAGTACTAAGTTACTAG+AGG + chr4_3:429560-429579 None:intergenic 30.0%
CTAGTAACTTAGTACTTCTT+TGG - chr4_3:429560-429579 Msa0623220:exon 30.0%
! GAAATTGGGATTAGGGTTTT+AGG + chr4_3:424794-424813 None:intergenic 35.0%
GAAAACGAGAAATTGGGATT+AGG + chr4_3:424802-424821 None:intergenic 35.0%
AGTGAGATTGTAGAGATACA+TGG + chr4_3:424836-424855 None:intergenic 35.0%
ATTCTCTCTGTTGAAGTCTT+CGG - chr4_3:424988-425007 Msa0623220:three_prime_UTR 35.0%
AATAACAATCCTACCGGAAT+CGG + chr4_3:425079-425098 None:intergenic 35.0%
TATATTGCTGTAGATCCCAA+AGG - chr4_3:425189-425208 Msa0623220:intron 35.0%
ATCATAACAGCTCTACCTTT+GGG + chr4_3:425207-425226 None:intergenic 35.0%
AATCATAACAGCTCTACCTT+TGG + chr4_3:425208-425227 None:intergenic 35.0%
AAAGGTAGAGCTGTTATGAT+TGG - chr4_3:425207-425226 Msa0623220:intron 35.0%
!! TCAATTTGTGGTGTTGATTG+TGG - chr4_3:425336-425355 Msa0623220:CDS 35.0%
!! TATTGAGTTGGATTACTCTG+AGG - chr4_3:425383-425402 Msa0623220:CDS 35.0%
GACATTCTATGAGCTTGATT+TGG - chr4_3:425455-425474 Msa0623220:intron 35.0%
TTAACCATGTTTCGAGAAAG+TGG - chr4_3:425481-425500 Msa0623220:intron 35.0%
! AATTTGCTTGTTACTGTTCC+TGG - chr4_3:425528-425547 Msa0623220:intron 35.0%
CTTAAAGATATCACCGTACT+CGG + chr4_3:425739-425758 None:intergenic 35.0%
!! TGATATCTTTAAGGCTACGT+TGG - chr4_3:425746-425765 Msa0623220:CDS 35.0%
CATTGAAGAAGTAACAGGAA+TGG + chr4_3:425820-425839 None:intergenic 35.0%
ACACACATTGAAGAAGTAAC+AGG + chr4_3:425825-425844 None:intergenic 35.0%
CATGGTCTGTATCAGTTTAA+GGG - chr4_3:425888-425907 Msa0623220:CDS 35.0%
CTGTATCAGTTTAAGGGAAT+AGG - chr4_3:425894-425913 Msa0623220:CDS 35.0%
GTATCAGTTTAAGGGAATAG+GGG - chr4_3:425896-425915 Msa0623220:CDS 35.0%
!! ACAAGGTTTTTCAGTTTCCT+GGG + chr4_3:425996-426015 None:intergenic 35.0%
!! AACAAGGTTTTTCAGTTTCC+TGG + chr4_3:425997-426016 None:intergenic 35.0%
GGAAACTGAAAAACCTTGTT+AGG - chr4_3:425997-426016 Msa0623220:CDS 35.0%
AAACCTTGTTAGGATTGATC+AGG - chr4_3:426007-426026 Msa0623220:CDS 35.0%
GATGCCAATTACTGATATGA+AGG - chr4_3:426040-426059 Msa0623220:CDS 35.0%
CTGACCTTCATATCAGTAAT+TGG + chr4_3:426047-426066 None:intergenic 35.0%
! ATTTTTACTCTTTGTGGTCG+TGG - chr4_3:426095-426114 Msa0623220:CDS 35.0%
ACCTATCAAAGAAACCGAAA+GGG + chr4_3:426345-426364 None:intergenic 35.0%
AAGTTCATCCAAACGGTATT+AGG - chr4_3:426381-426400 Msa0623220:intron 35.0%
AAACGGTATTAGGCATATCA+GGG - chr4_3:426391-426410 Msa0623220:intron 35.0%
GAGTTCTCCACTCATTAATA+CGG + chr4_3:426424-426443 None:intergenic 35.0%
AAGAGGACAATTGCAAAAGT+TGG - chr4_3:426449-426468 Msa0623220:intron 35.0%
AGAGGACAATTGCAAAAGTT+GGG - chr4_3:426450-426469 Msa0623220:intron 35.0%
! CAGGTTGTTATTGCTCTAAA+CGG - chr4_3:426485-426504 Msa0623220:intron 35.0%
! TTGTTATTGCTCTAAACGGA+GGG - chr4_3:426489-426508 Msa0623220:intron 35.0%
! ACAATAATGGGAAACAGCTT+CGG + chr4_3:426917-426936 None:intergenic 35.0%
CTGTTTCCCATTATTGTAAG+AGG - chr4_3:426920-426939 Msa0623220:CDS 35.0%
CGCTTTCCTCTTACAATAAT+GGG + chr4_3:426929-426948 None:intergenic 35.0%
ACGCTTTCCTCTTACAATAA+TGG + chr4_3:426930-426949 None:intergenic 35.0%
!! CATATGAAAGGGGTGTTAAA+AGG + chr4_3:427009-427028 None:intergenic 35.0%
TCAAGGGTTTCATATGAAAG+GGG + chr4_3:427019-427038 None:intergenic 35.0%
AAATGAGGCAGCAAATTCAA+GGG + chr4_3:427035-427054 None:intergenic 35.0%
AAAATGAGGCAGCAAATTCA+AGG + chr4_3:427036-427055 None:intergenic 35.0%
ACATTGGTCAGATGAAAATG+AGG + chr4_3:427050-427069 None:intergenic 35.0%
! ATTTTCATCTGACCAATGTG+TGG - chr4_3:427051-427070 Msa0623220:CDS 35.0%
! CACTTATCTGATTCAGCTTT+TGG + chr4_3:427391-427410 None:intergenic 35.0%
CAAAAGCTGAATCAGATAAG+TGG - chr4_3:427389-427408 Msa0623220:CDS 35.0%
AGAATTCTTGATCCCAAAAC+AGG - chr4_3:427424-427443 Msa0623220:CDS 35.0%
! CAGGTTGTATTTCCTGTTTT+GGG + chr4_3:427439-427458 None:intergenic 35.0%
! ACAGGTTGTATTTCCTGTTT+TGG + chr4_3:427440-427459 None:intergenic 35.0%
! AGGAAATACAACCTGTCTTT+TGG - chr4_3:427444-427463 Msa0623220:CDS 35.0%
TGAACTACTTCACAAAACTC+AGG - chr4_3:427639-427658 Msa0623220:CDS 35.0%
AAATCATATAGCCTGAGAAC+AGG + chr4_3:427724-427743 None:intergenic 35.0%
TGTTCTCAGGCTATATGATT+TGG - chr4_3:427723-427742 Msa0623220:CDS 35.0%
GTTCTCAGGCTATATGATTT+GGG - chr4_3:427724-427743 Msa0623220:CDS 35.0%
TGGGAAAAAGACGGTTATTA+AGG - chr4_3:427743-427762 Msa0623220:CDS 35.0%
GAATAGAGACAATTGTGTTG+GGG + chr4_3:427789-427808 None:intergenic 35.0%
AACATAAATTCGATCACGGT+AGG + chr4_3:427815-427834 None:intergenic 35.0%
TACCGTGATCGAATTTATGT+TGG - chr4_3:427814-427833 Msa0623220:CDS 35.0%
CACCAACATAAATTCGATCA+CGG + chr4_3:427819-427838 None:intergenic 35.0%
!! TTATGTTGGTGACATTCAAG+AGG - chr4_3:427828-427847 Msa0623220:CDS 35.0%
! GTTTTTATTAGAGCTCCAGA+AGG - chr4_3:428024-428043 Msa0623220:CDS 35.0%
TCCATTACTGCAAGTATAGA+CGG - chr4_3:428209-428228 Msa0623220:CDS 35.0%
CATCAGCAAATATGTAGAGT+TGG + chr4_3:428243-428262 None:intergenic 35.0%
TGTATCTGATGAGATAGAAG+AGG - chr4_3:428366-428385 Msa0623220:CDS 35.0%
ATATGATCTCTTCCACACAA+AGG + chr4_3:428646-428665 None:intergenic 35.0%
TTTGTGTGGAAGAGATCATA+TGG - chr4_3:428645-428664 Msa0623220:CDS 35.0%
TACCTTAACAGGAAAATAGG+CGG + chr4_3:428680-428699 None:intergenic 35.0%
TTTGACATCCATATACTGGA+TGG - chr4_3:428758-428777 Msa0623220:CDS 35.0%
! CCCTGTTATATTTTCCTTGA+TGG - chr4_3:428790-428809 Msa0623220:CDS 35.0%
CCCATCAAGGAAAATATAAC+AGG + chr4_3:428794-428813 None:intergenic 35.0%
TGTGTAGGATGTTATTGATG+GGG - chr4_3:428944-428963 Msa0623220:CDS 35.0%
! ATTTTTCTCTGCAGATCCAT+TGG + chr4_3:428996-429015 None:intergenic 35.0%
AAATTGCTGATGAATTGGAC+AGG - chr4_3:429012-429031 Msa0623220:CDS 35.0%
TTTCTTCAGTATTTCTCCAG+GGG + chr4_3:429039-429058 None:intergenic 35.0%
GTTTCTTCAGTATTTCTCCA+GGG + chr4_3:429040-429059 None:intergenic 35.0%
AGTTTCTTCAGTATTTCTCC+AGG + chr4_3:429041-429060 None:intergenic 35.0%
!! GTATGATCTCCTATTTCTGT+TGG - chr4_3:429107-429126 Msa0623220:CDS 35.0%
GACAGTAAACCAACAGAAAT+AGG + chr4_3:429119-429138 None:intergenic 35.0%
!! GTGTGATTTGTATTTTGTGC+AGG - chr4_3:429347-429366 Msa0623220:CDS 35.0%
! TTTGTATTTTGTGCAGGTGT+TGG - chr4_3:429353-429372 Msa0623220:CDS 35.0%
CATGCTTTCTTCACTTTGTT+AGG + chr4_3:429422-429441 None:intergenic 35.0%
CTAACAAAGTGAAGAAAGCA+TGG - chr4_3:429420-429439 Msa0623220:CDS 35.0%
! AACAAAGTGAAGAAAGCATG+GGG - chr4_3:429422-429441 Msa0623220:CDS 35.0%
!!! GGATTAGGGTTTTAGGGTTT+CGG + chr4_3:424787-424806 None:intergenic 40.0%
GAAGACTTCAACAGAGAGAA+TGG + chr4_3:424989-425008 None:intergenic 40.0%
CAGAAGGATTTCATCGTTGT+CGG - chr4_3:425051-425070 Msa0623220:intron 40.0%
!! CAAGAGACTTTTGGGAAATC+TGG - chr4_3:425141-425160 Msa0623220:three_prime_UTR 40.0%
TCTACAGCAATATACTCACC+TGG + chr4_3:425183-425202 None:intergenic 40.0%
TGAATAGAGATACTGCTGCT+AGG - chr4_3:425262-425281 Msa0623220:intron 40.0%
!! TGGTCTGATCAGGTTGATAA+TGG - chr4_3:425501-425520 Msa0623220:intron 40.0%
! AAGTGGAGTTCTTGTTTGTG+CGG - chr4_3:425566-425585 Msa0623220:intron 40.0%
!! ATATAAGAATCAGGGGCATC+CGG - chr4_3:425602-425621 Msa0623220:intron 40.0%
TGCTGCTATGCATAAACTGA+AGG - chr4_3:425689-425708 Msa0623220:intron 40.0%
GCTGCTATGCATAAACTGAA+GGG - chr4_3:425690-425709 Msa0623220:intron 40.0%
CTATGCATAAACTGAAGGGT+GGG - chr4_3:425694-425713 Msa0623220:intron 40.0%
CGAGTACGGTGATATCTTTA+AGG - chr4_3:425737-425756 Msa0623220:CDS 40.0%
TTCAATGTGTGTGCTCAAGT+CGG - chr4_3:425833-425852 Msa0623220:CDS 40.0%
CCTTAAACTGATACAGACCA+TGG + chr4_3:425890-425909 None:intergenic 40.0%
CCATGGTCTGTATCAGTTTA+AGG - chr4_3:425887-425906 Msa0623220:CDS 40.0%
! AATAGGGGATGATGATGATG+TGG - chr4_3:425911-425930 Msa0623220:CDS 40.0%
CAACCTGATCAATCCTAACA+AGG + chr4_3:426013-426032 None:intergenic 40.0%
AAGATCCTCAAAGAAGATCG+AGG + chr4_3:426122-426141 None:intergenic 40.0%
! TCTTTGAGGATCTTGAGAAC+AGG - chr4_3:426128-426147 Msa0623220:CDS 40.0%
ATCAAAGAAACCGAAAGGGA+GGG + chr4_3:426341-426360 None:intergenic 40.0%
TATCAAAGAAACCGAAAGGG+AGG + chr4_3:426342-426361 None:intergenic 40.0%
TCCCTTTCGGTTTCTTTGAT+AGG - chr4_3:426341-426360 Msa0623220:intron 40.0%
CACCTATCAAAGAAACCGAA+AGG + chr4_3:426346-426365 None:intergenic 40.0%
CTCATGCAAGTTCATCCAAA+CGG - chr4_3:426374-426393 Msa0623220:intron 40.0%
CTGATATGCCTAATACCGTT+TGG + chr4_3:426392-426411 None:intergenic 40.0%
CAAACGGTATTAGGCATATC+AGG - chr4_3:426390-426409 Msa0623220:intron 40.0%
ATTAATGAGTGGAGAACTCC+TGG - chr4_3:426425-426444 Msa0623220:intron 40.0%
TTTGCAATTGTCCTCTTTCC+AGG + chr4_3:426446-426465 None:intergenic 40.0%
! GTTGTTATTGCTCTAAACGG+AGG - chr4_3:426488-426507 Msa0623220:intron 40.0%
! TGTTATTGCTCTAAACGGAG+GGG - chr4_3:426490-426509 Msa0623220:intron 40.0%
GGATGTAACTGGTCAATTGA+TGG - chr4_3:426532-426551 Msa0623220:intron 40.0%
TGTAACTGGTCAATTGATGG+AGG - chr4_3:426535-426554 Msa0623220:intron 40.0%
ATGAGCCAACAGCAAGAAAA+CGG + chr4_3:426634-426653 None:intergenic 40.0%
GACAATCCGAATCTTATCAC+TGG - chr4_3:426661-426680 Msa0623220:CDS 40.0%
CAGGATCCAGTGATAAGATT+CGG + chr4_3:426670-426689 None:intergenic 40.0%
AGAGTCTGCATACAATCATC+AGG + chr4_3:426689-426708 None:intergenic 40.0%
GATGATTGTATGCAGACTCT+AGG - chr4_3:426689-426708 Msa0623220:CDS 40.0%
TCAAGGAAAAGAAGCGATTC+TGG + chr4_3:426737-426756 None:intergenic 40.0%
CAACAGATGCTTGAACTTCA+AGG + chr4_3:426754-426773 None:intergenic 40.0%
CTTGAAGTTCAAGCATCTGT+TGG - chr4_3:426752-426771 Msa0623220:CDS 40.0%
! AATAATGGGAAACAGCTTCG+GGG + chr4_3:426915-426934 None:intergenic 40.0%
! CAATAATGGGAAACAGCTTC+GGG + chr4_3:426916-426935 None:intergenic 40.0%
!! GTGTTAAAAGGAAGTGTCCT+TGG + chr4_3:426997-427016 None:intergenic 40.0%
AATTTGTGCTGCAACCCAAA+CGG - chr4_3:427179-427198 Msa0623220:CDS 40.0%
ACCACCAAAAGTTTCCGTTT+GGG + chr4_3:427196-427215 None:intergenic 40.0%
!!! TGCAAGGAAAGAGTGTTTTG+AGG - chr4_3:427261-427280 Msa0623220:CDS 40.0%
ACCATAATGCTCATCAGAGA+GGG + chr4_3:427365-427384 None:intergenic 40.0%
AACCATAATGCTCATCAGAG+AGG + chr4_3:427366-427385 None:intergenic 40.0%
! TTTGGAGCTTCAGGATAATG+AGG - chr4_3:427462-427481 Msa0623220:CDS 40.0%
! CCAGCAGTTAAACTCCTTTT+GGG + chr4_3:427577-427596 None:intergenic 40.0%
! TCCAGCAGTTAAACTCCTTT+TGG + chr4_3:427578-427597 None:intergenic 40.0%
!! CTTCACAAAACTCAGGTTGA+AGG - chr4_3:427646-427665 Msa0623220:CDS 40.0%
TGAAACTGACTAAGAGCAAG+AGG + chr4_3:427676-427695 None:intergenic 40.0%
TCTTGCTCTTAGTCAGTTTC+AGG - chr4_3:427675-427694 Msa0623220:CDS 40.0%
CTTGCTCTTAGTCAGTTTCA+GGG - chr4_3:427676-427695 Msa0623220:CDS 40.0%
TTTCAGGGAAGATTACTTGC+AGG - chr4_3:427691-427710 Msa0623220:CDS 40.0%
GGAAGATTACTTGCAGGATT+AGG - chr4_3:427697-427716 Msa0623220:CDS 40.0%
CTGACACTATAACCTGTCTT+TGG - chr4_3:427968-427987 Msa0623220:CDS 40.0%
! ACTTGCAGTAATGGAAAGAC+TGG + chr4_3:428204-428223 None:intergenic 40.0%
CCATTACTGCAAGTATAGAC+GGG - chr4_3:428210-428229 Msa0623220:CDS 40.0%
! CCATGGTGTCAAAATCTATG+TGG + chr4_3:428297-428316 None:intergenic 40.0%
!! CCACATAGATTTTGACACCA+TGG - chr4_3:428294-428313 Msa0623220:CDS 40.0%
!! ATAGATTTTGACACCATGGC+AGG - chr4_3:428298-428317 Msa0623220:CDS 40.0%
ATCTCATCAGATACATCCTG+CGG + chr4_3:428361-428380 None:intergenic 40.0%
!! GGTGGAGAGTGCATTTTATA+TGG - chr4_3:428520-428539 Msa0623220:CDS 40.0%
! GGAACAGTTATGGGAAGTAT+TGG - chr4_3:428541-428560 Msa0623220:CDS 40.0%
CTCATTTGGAGATGCATATG+AGG - chr4_3:428608-428627 Msa0623220:CDS 40.0%
! ATCCGCCTATTTTCCTGTTA+AGG - chr4_3:428675-428694 Msa0623220:CDS 40.0%
GCTGTTTGACATCCATATAC+TGG - chr4_3:428754-428773 Msa0623220:CDS 40.0%
GAAAGCTTCCATCCAGTATA+TGG + chr4_3:428769-428788 None:intergenic 40.0%
! GACTTTTTAAACCATGCCTC+TGG - chr4_3:428823-428842 Msa0623220:CDS 40.0%
! CATGTAGGTATTTTCACCAG+AGG + chr4_3:428842-428861 None:intergenic 40.0%
CACGAAATGTATGGACATGT+AGG + chr4_3:428857-428876 None:intergenic 40.0%
ATGTTGGGAATTGCTCACAT+AGG + chr4_3:428971-428990 None:intergenic 40.0%
GCAATTCCCAACATTACCAA+TGG - chr4_3:428977-428996 Msa0623220:CDS 40.0%
!! GCAGATCCATTGGTAATGTT+GGG + chr4_3:428986-429005 None:intergenic 40.0%
!! TGCAGATCCATTGGTAATGT+TGG + chr4_3:428987-429006 None:intergenic 40.0%
GCGCTAGTCAAATGTTGATA+TGG - chr4_3:429265-429284 Msa0623220:CDS 40.0%
! TGTTACTTGAGTAAGCCGTT+TGG - chr4_3:429388-429407 Msa0623220:CDS 40.0%
CATGGGGTTTCTCATTCATA+CGG - chr4_3:429438-429457 Msa0623220:CDS 40.0%
ATGGGGTTTCTCATTCATAC+GGG - chr4_3:429439-429458 Msa0623220:CDS 40.0%
!! GAGATCTAAGGTTTTGCCTC+TGG + chr4_3:424935-424954 None:intergenic 45.0%
TTGAATTCGACCGTTGTCGT+CGG + chr4_3:424965-424984 None:intergenic 45.0%
AGTGAGACGAAACTGAGCTA+GGG + chr4_3:425025-425044 None:intergenic 45.0%
!! CTTTTGGGAAATCTGGTTGC+CGG - chr4_3:425148-425167 Msa0623220:three_prime_UTR 45.0%
ACTCACCTGGAACAATTCTC+CGG + chr4_3:425170-425189 None:intergenic 45.0%
CATACCAGTCGAATCCTGAT+CGG + chr4_3:425409-425428 None:intergenic 45.0%
CAGACCACTTTCTCGAAACA+TGG + chr4_3:425488-425507 None:intergenic 45.0%
TTCGAGAAAGTGGTCTGATC+AGG - chr4_3:425491-425510 Msa0623220:intron 45.0%
! TTGCTTGTTACTGTTCCTGG+TGG - chr4_3:425531-425550 Msa0623220:intron 45.0%
GCACAAACAAGAACTCCACT+TGG + chr4_3:425567-425586 None:intergenic 45.0%
GCTATGCATAAACTGAAGGG+TGG - chr4_3:425693-425712 Msa0623220:intron 45.0%
TAAGGCTACGTTGGAACATG+AGG - chr4_3:425755-425774 Msa0623220:CDS 45.0%
AAGGCTACGTTGGAACATGA+GGG - chr4_3:425756-425775 Msa0623220:CDS 45.0%
TCAATGTGTGTGCTCAAGTC+GGG - chr4_3:425834-425853 Msa0623220:CDS 45.0%
AGCCTGATGGAAACTGAAGA+GGG - chr4_3:425948-425967 Msa0623220:CDS 45.0%
AACCCTCTTCAGTTTCCATC+AGG + chr4_3:425953-425972 None:intergenic 45.0%
GGTCAGCAATCTGTTTGAAG+AGG - chr4_3:426061-426080 Msa0623220:CDS 45.0%
GAGGATCTTGAGAACAGGTT+TGG - chr4_3:426133-426152 Msa0623220:CDS 45.0%
CAAACAGCACTAGGTATACC+GGG + chr4_3:426188-426207 None:intergenic 45.0%
CCAAACAGCACTAGGTATAC+CGG + chr4_3:426189-426208 None:intergenic 45.0%
TTCACAGTCCAAACAGCACT+AGG + chr4_3:426197-426216 None:intergenic 45.0%
! CTCACCAATGGAAAGCACAA+GGG + chr4_3:426276-426295 None:intergenic 45.0%
! TCTCACCAATGGAAAGCACA+AGG + chr4_3:426277-426296 None:intergenic 45.0%
TTCTTCGACTGTCTCACCAA+TGG + chr4_3:426288-426307 None:intergenic 45.0%
TCGAAGAAGTCAGTGACAGT+GGG - chr4_3:426300-426319 Msa0623220:intron 45.0%
!! AGTCAGTGACAGTGGGTTTT+TGG - chr4_3:426307-426326 Msa0623220:intron 45.0%
ATTAGGCATATCAGGGAGGA+TGG - chr4_3:426398-426417 Msa0623220:intron 45.0%
AGGATGGCCGTATTAATGAG+TGG - chr4_3:426414-426433 Msa0623220:intron 45.0%
AGTTGGGTCGAATAGACTTC+AGG - chr4_3:426466-426485 Msa0623220:intron 45.0%
AACTGGTCAATTGATGGAGG+TGG - chr4_3:426538-426557 Msa0623220:intron 45.0%
! GTGGAGAAGCATGAAATGTC+TGG - chr4_3:426557-426576 Msa0623220:CDS 45.0%
! GTCTGGTGATGTTGCTTGTT+TGG - chr4_3:426574-426593 Msa0623220:CDS 45.0%
!! AGATCCCGTTTTCTTGCTGT+TGG - chr4_3:426626-426645 Msa0623220:CDS 45.0%
TGAGCCAACAGCAAGAAAAC+GGG + chr4_3:426633-426652 None:intergenic 45.0%
GAAGTTCAAGCATCTGTTGG+CGG - chr4_3:426755-426774 Msa0623220:CDS 45.0%
GATACTCGATCCCGATTCTT+AGG - chr4_3:426881-426900 Msa0623220:CDS 45.0%
GGGTCTCAATCCTAAGAATC+GGG + chr4_3:426894-426913 None:intergenic 45.0%
GGGGTCTCAATCCTAAGAAT+CGG + chr4_3:426895-426914 None:intergenic 45.0%
! ATAATGGGAAACAGCTTCGG+GGG + chr4_3:426914-426933 None:intergenic 45.0%
GGTGAATGTAACCAAGCCAA+GGG + chr4_3:426976-426995 None:intergenic 45.0%
TGGTGAATGTAACCAAGCCA+AGG + chr4_3:426977-426996 None:intergenic 45.0%
!! TGGCTTGGTTACATTCACCA+AGG - chr4_3:426977-426996 Msa0623220:CDS 45.0%
TCATCTGACCAATGTGTGGA+AGG - chr4_3:427055-427074 Msa0623220:CDS 45.0%
CAACTACACCTTCCACACAT+TGG + chr4_3:427066-427085 None:intergenic 45.0%
TTCCACTTAGATACACGCCT+AGG - chr4_3:427155-427174 Msa0623220:CDS 45.0%
TTCCTAGGCGTGTATCTAAG+TGG + chr4_3:427160-427179 None:intergenic 45.0%
GGTTGCAGCACAAATTTCCT+AGG + chr4_3:427175-427194 None:intergenic 45.0%
! GCAACCCAAACGGAAACTTT+TGG - chr4_3:427189-427208 Msa0623220:CDS 45.0%
! ACCCAAACGGAAACTTTTGG+TGG - chr4_3:427192-427211 Msa0623220:CDS 45.0%
CACCACCAAAAGTTTCCGTT+TGG + chr4_3:427197-427216 None:intergenic 45.0%
GTGGTGATTGAGAGTGATCA+AGG - chr4_3:427211-427230 Msa0623220:CDS 45.0%
! GACAGAAAGTGCAGACCAAA+TGG - chr4_3:427306-427325 Msa0623220:CDS 45.0%
AGTGCAGACCAAATGGAGAA+TGG - chr4_3:427313-427332 Msa0623220:CDS 45.0%
CATAATGCTCATCAGAGAGG+GGG + chr4_3:427363-427382 None:intergenic 45.0%
CCATAATGCTCATCAGAGAG+GGG + chr4_3:427364-427383 None:intergenic 45.0%
GGGATCAAGAATTCTGATGC+AGG + chr4_3:427419-427438 None:intergenic 45.0%
!!! AACCTGTCTTTTGGAGCTTC+AGG - chr4_3:427453-427472 Msa0623220:CDS 45.0%
ATCCTGAAGCTCCAAAAGAC+AGG + chr4_3:427458-427477 None:intergenic 45.0%
! TACGGAACTCTTTTAGCCGT+TGG - chr4_3:427526-427545 Msa0623220:CDS 45.0%
GACTGCAATTTACGCCCAAA+AGG - chr4_3:427560-427579 Msa0623220:CDS 45.0%
CCCAAAAGGAGTTTAACTGC+TGG - chr4_3:427574-427593 Msa0623220:CDS 45.0%
TTAACACTCTGGCCAAAGAC+AGG + chr4_3:427983-428002 None:intergenic 45.0%
CCCGTCTATACTTGCAGTAA+TGG + chr4_3:428213-428232 None:intergenic 45.0%
CTGATGATTGCGTTCCAAGA+TGG - chr4_3:428257-428276 Msa0623220:CDS 45.0%
TATGATGCGGTAAGCCATCT+TGG + chr4_3:428274-428293 None:intergenic 45.0%
GAGATAGAAGAGGATCCTAC+TGG - chr4_3:428376-428395 Msa0623220:CDS 45.0%
ATAGAAGAGGATCCTACTGG+TGG - chr4_3:428379-428398 Msa0623220:CDS 45.0%
TAGAAGAGGATCCTACTGGT+GGG - chr4_3:428380-428399 Msa0623220:CDS 45.0%
TGTGATCTCATGCCTGCAAA+AGG - chr4_3:428480-428499 Msa0623220:CDS 45.0%
! GTATAAGAGAGGCCTTTTGC+AGG + chr4_3:428495-428514 None:intergenic 45.0%
CAAAAGGCCTCTCTTATACC+AGG - chr4_3:428496-428515 Msa0623220:CDS 45.0%
TTTGGAGATGCATATGAGGC+AGG - chr4_3:428612-428631 Msa0623220:CDS 45.0%
CAGGATAATCCACCTTTGTG+TGG - chr4_3:428631-428650 Msa0623220:CDS 45.0%
TGATCTCTTCCACACAAAGG+TGG + chr4_3:428643-428662 None:intergenic 45.0%
AGTCATAAGCAGACCCATCA+AGG + chr4_3:428807-428826 None:intergenic 45.0%
! AGGTATTTTCACCAGAGGCA+TGG + chr4_3:428837-428856 None:intergenic 45.0%
CTTCACTTTGTTAGGGAGCA+AGG + chr4_3:429414-429433 None:intergenic 45.0%
GGTTTCTCATTCATACGGGA+AGG - chr4_3:429443-429462 Msa0623220:CDS 45.0%
TTCTCATTCATACGGGAAGG+CGG - chr4_3:429446-429465 Msa0623220:CDS 45.0%
ACCAATCAGGCTGCCTATTT+GGG - chr4_3:429596-429615 Msa0623220:five_prime_UTR 45.0%
CTTCACTGTGACTGTGTGAG+TGG + chr4_3:424742-424761 None:intergenic 50.0%
!! GTTGATGGCGCAGATGATTC+CGG + chr4_3:424872-424891 None:intergenic 50.0%
GGAATCATCTGCGCCATCAA+CGG - chr4_3:424871-424890 Msa0623220:three_prime_UTR 50.0%
GATTTCTTGACCCTTACCGC+CGG + chr4_3:424905-424924 None:intergenic 50.0%
TGAATTCGACCGTTGTCGTC+GGG + chr4_3:424964-424983 None:intergenic 50.0%
CAGTGAGACGAAACTGAGCT+AGG + chr4_3:425026-425045 None:intergenic 50.0%
CTAGCTCAGTTTCGTCTCAC+TGG - chr4_3:425024-425043 Msa0623220:intron 50.0%
!! ATCGTTGTCGGTTCCGATTC+CGG - chr4_3:425063-425082 Msa0623220:intron 50.0%
CGATCAGGATTCGACTGGTA+TGG - chr4_3:425407-425426 Msa0623220:CDS 50.0%
GGAATCACAGCCCTAACATC+CGG + chr4_3:425624-425643 None:intergenic 50.0%
ATAAGAACACCACGCTCAGC+AGG + chr4_3:425663-425682 None:intergenic 50.0%
TTCCTTCTGCAGACCGAGTA+CGG - chr4_3:425723-425742 Msa0623220:CDS 50.0%
CGTTGGAACATGAGGGTGAT+CGG - chr4_3:425763-425782 Msa0623220:CDS 50.0%
CAATGTGTGTGCTCAAGTCG+GGG - chr4_3:425835-425854 Msa0623220:CDS 50.0%
! CAAGTCGGGGTTCTTGTTTG+CGG - chr4_3:425848-425867 Msa0623220:CDS 50.0%
TTGTTTGCGGCGTCTGAGTT+TGG - chr4_3:425861-425880 Msa0623220:CDS 50.0%
GCGTCTGAGTTTGGAAACCA+TGG - chr4_3:425870-425889 Msa0623220:CDS 50.0%
! AGGGGATGATGATGATGTGG+AGG - chr4_3:425914-425933 Msa0623220:CDS 50.0%
GAGCCTGATGGAAACTGAAG+AGG - chr4_3:425947-425966 Msa0623220:CDS 50.0%
! TTCCTGGGCTGGAAAAACAC+AGG + chr4_3:425981-426000 None:intergenic 50.0%
!! GGTTTTTCAGTTTCCTGGGC+TGG + chr4_3:425992-426011 None:intergenic 50.0%
GTGGACCTCGATCTTCTTTG+AGG - chr4_3:426114-426133 Msa0623220:CDS 50.0%
AGGTTTGGCTGTCAGTGAGA+TGG - chr4_3:426148-426167 Msa0623220:CDS 50.0%
ATGGCAGTTTCCAAGCTTCC+CGG - chr4_3:426167-426186 Msa0623220:CDS 50.0%
ACTAGGTATACCGGGAAGCT+TGG + chr4_3:426180-426199 None:intergenic 50.0%
! CCGGTATACCTAGTGCTGTT+TGG - chr4_3:426186-426205 Msa0623220:intron 50.0%
! ACCAATGGAAAGCACAAGGG+TGG + chr4_3:426273-426292 None:intergenic 50.0%
GTCGAAGAAGTCAGTGACAG+TGG - chr4_3:426299-426318 Msa0623220:intron 50.0%
CGGTATTAGGCATATCAGGG+AGG - chr4_3:426394-426413 Msa0623220:intron 50.0%
AGTGGAGAACTCCTGGAAAG+AGG - chr4_3:426432-426451 Msa0623220:intron 50.0%
CGTTCAGGAAAAGGCTAGCA+GGG + chr4_3:426799-426818 None:intergenic 50.0%
GCAAACCAGCGTTCAGGAAA+AGG + chr4_3:426808-426827 None:intergenic 50.0%
CATTCTGCAAACCAGCGTTC+AGG + chr4_3:426814-426833 None:intergenic 50.0%
!! CTGAACGCTGGTTTGCAGAA+TGG - chr4_3:426812-426831 Msa0623220:CDS 50.0%
!! TATCCACCACGGTTCTAGAC+AGG + chr4_3:426841-426860 None:intergenic 50.0%
!! GTCTAGAACCGTGGTGGATA+TGG - chr4_3:426841-426860 Msa0623220:CDS 50.0%
ACCTGTGACCATATCCACCA+CGG + chr4_3:426852-426871 None:intergenic 50.0%
! GAAGGTGTAGTTGCTGTTGC+TGG - chr4_3:427073-427092 Msa0623220:CDS 50.0%
! TGTAGTTGCTGTTGCTGGTG+AGG - chr4_3:427078-427097 Msa0623220:CDS 50.0%
!!! TGTTTTGAGGCTGCTCAAGC+TGG - chr4_3:427274-427293 Msa0623220:CDS 50.0%
!!! GTTTTGAGGCTGCTCAAGCT+GGG - chr4_3:427275-427294 Msa0623220:CDS 50.0%
!!! TTTTGAGGCTGCTCAAGCTG+GGG - chr4_3:427276-427295 Msa0623220:CDS 50.0%
CTGCTCAAGCTGGGGAAAAT+GGG - chr4_3:427284-427303 Msa0623220:CDS 50.0%
GCAGACCAAATGGAGAATGG+CGG - chr4_3:427316-427335 Msa0623220:CDS 50.0%
CAGACCAAATGGAGAATGGC+GGG - chr4_3:427317-427336 Msa0623220:CDS 50.0%
AGACCAAATGGAGAATGGCG+GGG - chr4_3:427318-427337 Msa0623220:CDS 50.0%
CCCCTCTCTGATGAGCATTA+TGG - chr4_3:427361-427380 Msa0623220:CDS 50.0%
TTTAGCCGTTGGCACAGCAA+AGG - chr4_3:427537-427556 Msa0623220:CDS 50.0%
TTAGCCGTTGGCACAGCAAA+GGG - chr4_3:427538-427557 Msa0623220:CDS 50.0%
CAGGATTAGGACCTGTTCTC+AGG - chr4_3:427710-427729 Msa0623220:CDS 50.0%
! TTTTGACACCATGGCAGGTG+CGG - chr4_3:428303-428322 Msa0623220:CDS 50.0%
TACTGGTGGGAGGATCAAGT+GGG - chr4_3:428393-428412 Msa0623220:CDS 50.0%
GCTGAATGGAGCTCCCAATA+AGG - chr4_3:428426-428445 Msa0623220:CDS 50.0%
GAATGGAGCTCCCAATAAGG+TGG - chr4_3:428429-428448 Msa0623220:CDS 50.0%
AAGGCCTCTCTTATACCAGG+TGG - chr4_3:428499-428518 Msa0623220:CDS 50.0%
TCCACCACCTGGTATAAGAG+AGG + chr4_3:428506-428525 None:intergenic 50.0%
AAAATGCACTCTCCACCACC+TGG + chr4_3:428517-428536 None:intergenic 50.0%
!! TTTGTGCAGGTGTTGGCGAA+AGG - chr4_3:429360-429379 Msa0623220:CDS 50.0%
TGTTAGGGAGCAAGGCCAAA+CGG + chr4_3:429406-429425 None:intergenic 50.0%
TGTCCCTCAGTTCACCAATC+AGG - chr4_3:429583-429602 Msa0623220:five_prime_UTR 50.0%
CAGCCTGATTGGTGAACTGA+GGG + chr4_3:429589-429608 None:intergenic 50.0%
CACCAATCAGGCTGCCTATT+TGG - chr4_3:429595-429614 Msa0623220:five_prime_UTR 50.0%
TCCCAAATAGGCAGCCTGAT+TGG + chr4_3:429600-429619 None:intergenic 50.0%
TGAGTGGAGCGGGAACAATG+CGG + chr4_3:424726-424745 None:intergenic 55.0%
TGTGACTGTGTGAGTGGAGC+GGG + chr4_3:424736-424755 None:intergenic 55.0%
CTGTGACTGTGTGAGTGGAG+CGG + chr4_3:424737-424756 None:intergenic 55.0%
CTCACTCTTCAACGACCCAC+CGG - chr4_3:424850-424869 Msa0623220:three_prime_UTR 55.0%
ATGGCGCAGATGATTCCGGT+GGG + chr4_3:424868-424887 None:intergenic 55.0%
GCCATCAACGGCAACTTCTC+CGG - chr4_3:424883-424902 Msa0623220:three_prime_UTR 55.0%
ATCAACGGCAACTTCTCCGG+CGG - chr4_3:424886-424905 Msa0623220:three_prime_UTR 55.0%
CAAGAAATCGTCGTCGCCAG+AGG - chr4_3:424916-424935 Msa0623220:three_prime_UTR 55.0%
GAATTCGACCGTTGTCGTCG+GGG + chr4_3:424963-424982 None:intergenic 55.0%
TCGTCTCACTGGTGCTCAGA+AGG - chr4_3:425035-425054 Msa0623220:intron 55.0%
!! TTGTCGGTTCCGATTCCGGT+AGG - chr4_3:425067-425086 Msa0623220:intron 55.0%
GGTTGCCGGAGAATTGTTCC+AGG - chr4_3:425162-425181 Msa0623220:three_prime_UTR 55.0%
!! GGATTACTCTGAGGCCGATC+AGG - chr4_3:425392-425411 Msa0623220:CDS 55.0%
! ACTGTTCCTGGTGGTGCTGA+TGG - chr4_3:425540-425559 Msa0623220:intron 55.0%
!! ATCAGGGGCATCCGGATGTT+AGG - chr4_3:425610-425629 Msa0623220:intron 55.0%
!! TCAGGGGCATCCGGATGTTA+GGG - chr4_3:425611-425630 Msa0623220:intron 55.0%
GCAGGCAAATCAGCACGTCT+GGG + chr4_3:425645-425664 None:intergenic 55.0%
AGCAGGCAAATCAGCACGTC+TGG + chr4_3:425646-425665 None:intergenic 55.0%
! AGCCTGTGTTTTTCCAGCCC+AGG - chr4_3:425976-425995 Msa0623220:CDS 55.0%
! GGAAAGCACAAGGGTGGCAT+TGG + chr4_3:426267-426286 None:intergenic 55.0%
GCCACCCTTGTGCTTTCCAT+TGG - chr4_3:426269-426288 Msa0623220:intron 55.0%
GGACACTACTCCCTCCCTTT+CGG - chr4_3:426328-426347 Msa0623220:intron 55.0%
GACATTGCTCCAGTGCCTGA+AGG - chr4_3:426596-426615 Msa0623220:CDS 55.0%
CTTTGTCTGCCTTCAGGCAC+TGG + chr4_3:426608-426627 None:intergenic 55.0%
CGGGATCTTTGTCTGCCTTC+AGG + chr4_3:426614-426633 None:intergenic 55.0%
TCAAGCATCTGTTGGCGGTG+AGG - chr4_3:426760-426779 Msa0623220:CDS 55.0%
CATCTGTTGGCGGTGAGGAT+GGG - chr4_3:426765-426784 Msa0623220:CDS 55.0%
ATCTGTTGGCGGTGAGGATG+GGG - chr4_3:426766-426785 Msa0623220:CDS 55.0%
GCGTTCAGGAAAAGGCTAGC+AGG + chr4_3:426800-426819 None:intergenic 55.0%
!!! GCTAGCCTTTTCCTGAACGC+TGG - chr4_3:426800-426819 Msa0623220:CDS 55.0%
! TGGTGTCCTGTCTAGAACCG+TGG - chr4_3:426832-426851 Msa0623220:CDS 55.0%
! TGTCCTGTCTAGAACCGTGG+TGG - chr4_3:426835-426854 Msa0623220:CDS 55.0%
!! ACCGTGGTGGATATGGTCAC+AGG - chr4_3:426848-426867 Msa0623220:CDS 55.0%
! CAGAAGAGCGTGAAGCTGCA+AGG - chr4_3:427245-427264 Msa0623220:CDS 55.0%
GCTGCTCAAGCTGGGGAAAA+TGG - chr4_3:427283-427302 Msa0623220:CDS 55.0%
! CAGTCCCTTTGCTGTGCCAA+CGG + chr4_3:427545-427564 None:intergenic 55.0%
AAACTTGTCCGCACCTGCCA+TGG + chr4_3:428314-428333 None:intergenic 55.0%
ATGGCAGGTGCGGACAAGTT+TGG - chr4_3:428313-428332 Msa0623220:CDS 55.0%
! CTATTTTGTGCGGTTGCCGC+AGG - chr4_3:428342-428361 Msa0623220:CDS 55.0%
AAGAGGATCCTACTGGTGGG+AGG - chr4_3:428383-428402 Msa0623220:CDS 55.0%
CACTTGATCCTCCCACCAGT+AGG + chr4_3:428394-428413 None:intergenic 55.0%
CTACTGGTGGGAGGATCAAG+TGG - chr4_3:428392-428411 Msa0623220:CDS 55.0%
GCCTCTCTTATACCAGGTGG+TGG - chr4_3:428502-428521 Msa0623220:CDS 55.0%
GATGAATTGGACAGGACCCC+TGG - chr4_3:429020-429039 Msa0623220:CDS 55.0%
GCAGCCTGATTGGTGAACTG+AGG + chr4_3:429590-429609 None:intergenic 55.0%
GATGGCGCAGATGATTCCGG+TGG + chr4_3:424869-424888 None:intergenic 60.0%
GCCGGAGAAGTTGCCGTTGA+TGG + chr4_3:424887-424906 None:intergenic 60.0%
GGCAACTTCTCCGGCGGTAA+GGG - chr4_3:424892-424911 Msa0623220:three_prime_UTR 60.0%
GTCGGGGCGAAGGAGATCTA+AGG + chr4_3:424947-424966 None:intergenic 60.0%
GAGGCCGATCAGGATTCGAC+TGG - chr4_3:425402-425421 Msa0623220:CDS 60.0%
CTTGGTCCATCAGCACCACC+AGG + chr4_3:425549-425568 None:intergenic 60.0%
!! GGTGGTGCTGATGGACCAAG+TGG - chr4_3:425549-425568 Msa0623220:intron 60.0%
!! GCTGATTTGCCTGCTGAGCG+TGG - chr4_3:425651-425670 Msa0623220:intron 60.0%
CACCGTACTCGGTCTGCAGA+AGG + chr4_3:425728-425747 None:intergenic 60.0%
TTCCATCAGGCTCGCAGACG+AGG + chr4_3:425940-425959 None:intergenic 60.0%
GCATCTGTTGGCGGTGAGGA+TGG - chr4_3:426764-426783 Msa0623220:CDS 60.0%
TCTGCCTGTCAAGTCGCCCT+TGG - chr4_3:426957-426976 Msa0623220:CDS 60.0%
CAAGCCAAGGGCGACTTGAC+AGG + chr4_3:426964-426983 None:intergenic 60.0%
CTGTCAAGTCGCCCTTGGCT+TGG - chr4_3:426962-426981 Msa0623220:CDS 60.0%
CCTCCCCGCCATTCTCCATT+TGG + chr4_3:427324-427343 None:intergenic 60.0%
! CCAAATGGAGAATGGCGGGG+AGG - chr4_3:427321-427340 Msa0623220:CDS 60.0%
TGGGAGGATCAAGTGGGAGC+AGG - chr4_3:428399-428418 Msa0623220:CDS 60.0%
GGGAGGATCAAGTGGGAGCA+GGG - chr4_3:428400-428419 Msa0623220:CDS 60.0%
GGAGGATCAAGTGGGAGCAG+GGG - chr4_3:428401-428420 Msa0623220:CDS 60.0%
TGGGAGCAGGGGAAGCTGAA+TGG - chr4_3:428412-428431 Msa0623220:CDS 60.0%
GTGGAGCGGGAACAATGCGG+AGG + chr4_3:424723-424742 None:intergenic 65.0%
CGGCAACTTCTCCGGCGGTA+AGG - chr4_3:424891-424910 Msa0623220:three_prime_UTR 65.0%
CTCCTTCGCCCCGACGACAA+CGG - chr4_3:424952-424971 Msa0623220:three_prime_UTR 65.0%
! GGAGAATGGCGGGGAGGATG+AGG - chr4_3:427327-427346 Msa0623220:CDS 65.0%
GACCGTTGTCGTCGGGGCGA+AGG + chr4_3:424957-424976 None:intergenic 70.0%
GGCCTCGTCTGCGAGCCTGA+TGG - chr4_3:425935-425954 Msa0623220:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 424679 429725 424679 ID=Msa0623220;Name=Msa0623220
chr4_3 mRNA 424679 429725 424679 ID=Msa0623220-mRNA-1;Parent=Msa0623220;Name=Msa0623220-mRNA-1;_AED=0.01;_eAED=0.01;_QI=156|1|1|1|0.5|0.6|5|445|1214
chr4_3 exon 424679 425035 424679 ID=Msa0623220-mRNA-1:exon:130;Parent=Msa0623220-mRNA-1
chr4_3 exon 425118 425187 425118 ID=Msa0623220-mRNA-1:exon:129;Parent=Msa0623220-mRNA-1
chr4_3 exon 425298 425453 425298 ID=Msa0623220-mRNA-1:exon:128;Parent=Msa0623220-mRNA-1
chr4_3 exon 425708 426199 425708 ID=Msa0623220-mRNA-1:exon:127;Parent=Msa0623220-mRNA-1
chr4_3 exon 426555 429725 426555 ID=Msa0623220-mRNA-1:exon:126;Parent=Msa0623220-mRNA-1
chr4_3 five_prime_UTR 429570 429725 429570 ID=Msa0623220-mRNA-1:five_prime_utr;Parent=Msa0623220-mRNA-1
chr4_3 CDS 426555 429569 426555 ID=Msa0623220-mRNA-1:cds;Parent=Msa0623220-mRNA-1
chr4_3 CDS 425708 426199 425708 ID=Msa0623220-mRNA-1:cds;Parent=Msa0623220-mRNA-1
chr4_3 CDS 425316 425453 425316 ID=Msa0623220-mRNA-1:cds;Parent=Msa0623220-mRNA-1
chr4_3 three_prime_UTR 425298 425315 425298 ID=Msa0623220-mRNA-1:three_prime_utr;Parent=Msa0623220-mRNA-1
chr4_3 three_prime_UTR 425118 425187 425118 ID=Msa0623220-mRNA-1:three_prime_utr;Parent=Msa0623220-mRNA-1
chr4_3 three_prime_UTR 424679 425035 424679 ID=Msa0623220-mRNA-1:three_prime_utr;Parent=Msa0623220-mRNA-1
Gene Sequence

>Msa0623220

ATGTATCTCTACAATCTCACTCTTCAACGACCCACCGGAATCATCTGCGCCATCAACGGCAACTTCTCCGGCGGTAAGGGTCAAGAAATCGTCGTCGCCAGAGGCAAAACCTTAGATCTCCTTCGCCCCGACGACAACGGTCGAATTCAAACCATTCTCTCTGTTGAAGTCTTCGGTGCAATTAGATCCCTAGCTCAGTTTCGTCTCACTGGTGCTCAGAAGGATTTCATCGTTGTCGGTTCCGATTCCGGTAGGATTGTTATTCTTGATTACAACAAAGAGAAAAATGTTTTTGATAAAATTCATCAAGAGACTTTTGGGAAATCTGGTTGCCGGAGAATTGTTCCAGGTGAGTATATTGCTGTAGATCCCAAAGGTAGAGCTGTTATGATTGGTGCTTGTGAAAAACAGAAGCTTGTTTATGTCTTGAATAGAGATACTGCTGCTAGGTTAACTATTTCTTCGCCGTTAGAAGCTCATAAATCACATACTCTTGTGTTTTCAATTTGTGGTGTTGATTGTGGTTTTGAGAATCCTATTTTTGCTGCTATTGAGTTGGATTACTCTGAGGCCGATCAGGATTCGACTGGTATGGCTGCTGCTGAAGCTCAGAAGAATTTGACATTCTATGAGCTTGATTTGGGTCTTAACCATGTTTCGAGAAAGTGGTCTGATCAGGTTGATAATGGTGCTAATTTGCTTGTTACTGTTCCTGGTGGTGCTGATGGACCAAGTGGAGTTCTTGTTTGTGCGGAAAATTTTGTTATATATAAGAATCAGGGGCATCCGGATGTTAGGGCTGTGATTCCCAGACGTGCTGATTTGCCTGCTGAGCGTGGTGTTCTTATTGTTTCTGCTGCTATGCATAAACTGAAGGGTGGGTTCTTTTTCCTTCTGCAGACCGAGTACGGTGATATCTTTAAGGCTACGTTGGAACATGAGGGTGATCGGATTTCTGAATTGAAGATCAAGTATTTTGATACCATTCCTGTTACTTCTTCAATGTGTGTGCTCAAGTCGGGGTTCTTGTTTGCGGCGTCTGAGTTTGGAAACCATGGTCTGTATCAGTTTAAGGGAATAGGGGATGATGATGATGTGGAGGCCTCGTCTGCGAGCCTGATGGAAACTGAAGAGGGTTTTCAGCCTGTGTTTTTCCAGCCCAGGAAACTGAAAAACCTTGTTAGGATTGATCAGGTTGAAAGTTTGATGCCAATTACTGATATGAAGGTCAGCAATCTGTTTGAAGAGGAGACTCCTCAAATTTTTACTCTTTGTGGTCGTGGACCTCGATCTTCTTTGAGGATCTTGAGAACAGGTTTGGCTGTCAGTGAGATGGCAGTTTCCAAGCTTCCCGGTATACCTAGTGCTGTTTGGACTGTGAAGAAGAATGTCATTGATGAGTTTGATGCTTATATCGTTGTGTCGTTCACCAATGCCACCCTTGTGCTTTCCATTGGTGAGACAGTCGAAGAAGTCAGTGACAGTGGGTTTTTGGACACTACTCCCTCCCTTTCGGTTTCTTTGATAGGTGATGATTCTCTCATGCAAGTTCATCCAAACGGTATTAGGCATATCAGGGAGGATGGCCGTATTAATGAGTGGAGAACTCCTGGAAAGAGGACAATTGCAAAAGTTGGGTCGAATAGACTTCAGGTTGTTATTGCTCTAAACGGAGGGGAGCTTATATATTTTGAAGTGGATGTAACTGGTCAATTGATGGAGGTGGAGAAGCATGAAATGTCTGGTGATGTTGCTTGTTTGGACATTGCTCCAGTGCCTGAAGGCAGACAAAGATCCCGTTTTCTTGCTGTTGGCTCATATGACAAGACAATCCGAATCTTATCACTGGATCCTGATGATTGTATGCAGACTCTAGGTATACAGAGTCTTTCTTCAGCTCCAGAATCGCTTCTTTTCCTTGAAGTTCAAGCATCTGTTGGCGGTGAGGATGGGGCAGATCACCCTGCTAGCCTTTTCCTGAACGCTGGTTTGCAGAATGGTGTCCTGTCTAGAACCGTGGTGGATATGGTCACAGGTCTGCTTTCTGATACTCGATCCCGATTCTTAGGATTGAGACCCCCGAAGCTGTTTCCCATTATTGTAAGAGGAAAGCGTGCTATGCTCTGCCTGTCAAGTCGCCCTTGGCTTGGTTACATTCACCAAGGACACTTCCTTTTAACACCCCTTTCATATGAAACCCTTGAATTTGCTGCCTCATTTTCATCTGACCAATGTGTGGAAGGTGTAGTTGCTGTTGCTGGTGAGGCGTTGAGAATTTTTACTATTGAAAGATTAGGAGAAACATTTAACGAGACAGTTATTCCACTTAGATACACGCCTAGGAAATTTGTGCTGCAACCCAAACGGAAACTTTTGGTGGTGATTGAGAGTGATCAAGGAGCATTTACTGCAGAAGAGCGTGAAGCTGCAAGGAAAGAGTGTTTTGAGGCTGCTCAAGCTGGGGAAAATGGGACAGAAAGTGCAGACCAAATGGAGAATGGCGGGGAGGATGAGGATAAAGATGACCCCCTCTCTGATGAGCATTATGGTTATCCAAAAGCTGAATCAGATAAGTGGGCATCCTGCATCAGAATTCTTGATCCCAAAACAGGAAATACAACCTGTCTTTTGGAGCTTCAGGATAATGAGGCTGCATTCAGCGTATGCACAGTAAATTTTCATGATAAAGAATACGGAACTCTTTTAGCCGTTGGCACAGCAAAGGGACTGCAATTTACGCCCAAAAGGAGTTTAACTGCTGGATTTATTCATATATATAGGTTTCTAGAGGATGGAAGATCTCTTGAACTACTTCACAAAACTCAGGTTGAAGGTGTTCCTCTTGCTCTTAGTCAGTTTCAGGGAAGATTACTTGCAGGATTAGGACCTGTTCTCAGGCTATATGATTTGGGAAAAAGACGGTTATTAAGGAAGTGTGAGAATAAGCTATTCCCCAACACAATTGTCTCTATTCAAACCTACCGTGATCGAATTTATGTTGGTGACATTCAAGAGTCTTTCCATTACTGCAAGTATAGACGGGATGAAAACCAACTCTACATATTTGCTGATGATTGCGTTCCAAGATGGCTTACCGCATCATACCACATAGATTTTGACACCATGGCAGGTGCGGACAAGTTTGGAAATATCTATTTTGTGCGGTTGCCGCAGGATGTATCTGATGAGATAGAAGAGGATCCTACTGGTGGGAGGATCAAGTGGGAGCAGGGGAAGCTGAATGGAGCTCCCAATAAGGTGGAAGAAATTGTACAATTTCATGTTGGTGATGTGATCTCATGCCTGCAAAAGGCCTCTCTTATACCAGGTGGTGGAGAGTGCATTTTATATGGAACAGTTATGGGAAGTATTGGAGCATTACATGCTTTTACTTCACGAGATGATGTTGATTTCTTTTCTCATTTGGAGATGCATATGAGGCAGGATAATCCACCTTTGTGTGGAAGAGATCATATGGCTTATAGATCCGCCTATTTTCCTGTTAAGGATGTTATTGATGGGGACCTATGTGAGCAATTCCCAACATTACCAATGGATCTGCAGAGAAAAATTGCTGATGAATTGGACAGGACCCCTGGAGAAATACTGAAGAAACTTGAGGAAGTACGAAATAAGATTATTTAA
Protein sequence

>Msa0623220

MYLYNLTLQRPTGIICAINGNFSGGKGQEIVVARGKTLDLLRPDDNGRIQTILSVEVFGAIRSLAQFRLTGAQKDFIVVGSDSGRIVILDYNKEKNVFDKIHQETFGKSGCRRIVPGEYIAVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVFSICGVDCGFENPIFAAIELDYSEADQDSTGMAAAEAQKNLTFYELDLGLNHVSRKWSDQVDNGANLLVTVPGGADGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAMHKLKGGFFFLLQTEYGDIFKATLEHEGDRISELKIKYFDTIPVTSSMCVLKSGFLFAASEFGNHGLYQFKGIGDDDDVEASSASLMETEEGFQPVFFQPRKLKNLVRIDQVESLMPITDMKVSNLFEEETPQIFTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNVIDEFDAYIVVSFTNATLVLSIGETVEEVSDSGFLDTTPSLSVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRTIAKVGSNRLQVVIALNGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDKTIRILSLDPDDCMQTLGIQSLSSAPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLSRTVVDMVTGLLSDTRSRFLGLRPPKLFPIIVRGKRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCVEGVVAVAGEALRIFTIERLGETFNETVIPLRYTPRKFVLQPKRKLLVVIESDQGAFTAEEREAARKECFEAAQAGENGTESADQMENGGEDEDKDDPLSDEHYGYPKAESDKWASCIRILDPKTGNTTCLLELQDNEAAFSVCTVNFHDKEYGTLLAVGTAKGLQFTPKRSLTAGFIHIYRFLEDGRSLELLHKTQVEGVPLALSQFQGRLLAGLGPVLRLYDLGKRRLLRKCENKLFPNTIVSIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKLNGAPNKVEEIVQFHVGDVISCLQKASLIPGGGECILYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPGEILKKLEEVRNKII*