AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1459690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1459690 MtrunA17_Chr3g0140651 97.684 1468 34 0 1 1468 487 1954 0.0 2976
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1459690 AT4G32820.1 55.252 1428 545 16 1 1407 487 1841 0.0 1483
Msa1459690 AT4G32820.3 55.753 1408 536 15 1 1394 487 1821 0.0 1481
Msa1459690 AT4G32820.2 54.906 1437 545 17 1 1407 487 1850 0.0 1474

Find 261 sgRNAs with CRISPR-Local

Find 617 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCCATGCTGCATCCTTTA+AGG 0.102019 tig0040401:-4351 None:intergenic
ATCAATTTCCCACATGTTTA+TGG 0.107008 tig0040401:-5208 None:intergenic
TCAGGCAAGCTGCATATTTC+TGG 0.154953 tig0040401:-7102 None:intergenic
GAGAATGTTTGCTTTATTTA+TGG 0.171491 tig0040401:+7062 Msa1459690:CDS
GAGAAATTACACATGCTTTA+TGG 0.189608 tig0040401:+9099 Msa1459690:three_prime_UTR
ACAGATCTCTGATCATAAAA+TGG 0.194710 tig0040401:-4323 None:intergenic
GAAAGCTTCTGATGAAAATT+TGG 0.201415 tig0040401:+7689 Msa1459690:CDS
CATGACATGCTTGCTGAATA+TGG 0.206451 tig0040401:+2013 Msa1459690:CDS
GCATGAAGGGTTACTAAAAT+TGG 0.229679 tig0040401:+4993 Msa1459690:CDS
GACATTCAGAAGAATCTATT+TGG 0.236786 tig0040401:+8624 Msa1459690:CDS
CTGTAACTTGTATCATTTCT+TGG 0.239538 tig0040401:+3176 Msa1459690:CDS
GTTGGAGATAAATGGAAAAT+TGG 0.240584 tig0040401:+7329 Msa1459690:CDS
TGTGAATGTGTATAAGAAAA+TGG 0.241283 tig0040401:+8784 Msa1459690:three_prime_UTR
TCGATCTCTTATATACAATT+TGG 0.252070 tig0040401:+7458 Msa1459690:CDS
ATTTGCAGCCACGTGAAATA+TGG 0.259913 tig0040401:+7577 Msa1459690:CDS
ATAGCATTGTTGGAGATAAA+TGG 0.292612 tig0040401:+7321 Msa1459690:CDS
TCTGAAAATCACTTGAGTTC+TGG 0.294668 tig0040401:+2355 Msa1459690:CDS
ATACCAGGGCCCTCAATTTC+AGG 0.298711 tig0040401:-7120 None:intergenic
TGAAATTACCTCTGTCAAAA+AGG 0.310036 tig0040401:+2261 Msa1459690:CDS
CTGAAAATCACTTGAGTTCT+GGG 0.321964 tig0040401:+2356 Msa1459690:CDS
CACATCTTCAGCTAGATTGA+TGG 0.326681 tig0040401:+9156 Msa1459690:three_prime_UTR
CAGCTACTATTTGAGAGTTT+AGG 0.332073 tig0040401:-7399 None:intergenic
TAGAAAATATCAAAACAAAA+TGG 0.334177 tig0040401:+7628 Msa1459690:CDS
CCAGCATGTATCTAGCCTTA+TGG 0.339349 tig0040401:-5092 None:intergenic
CGCAAGACACCGGGTTCTGC+TGG 0.341206 tig0040401:+5633 Msa1459690:CDS
AGAGGTAATTTCATCAATTC+TGG 0.342068 tig0040401:-2251 None:intergenic
ATGCTTTGTTTCCACAGAAT+TGG 0.342449 tig0040401:-4974 None:intergenic
TGGATTCTCAAATGGGATTC+AGG 0.351495 tig0040401:+7503 Msa1459690:CDS
TTTCCTGATGTGGGAGGTCT+TGG 0.352920 tig0040401:+2949 Msa1459690:CDS
GGCTTAATTTCTTAGCCTAA+TGG 0.355014 tig0040401:-8997 None:intergenic
AACAAATTCTTCCCCTTCCT+TGG 0.359521 tig0040401:-3250 None:intergenic
AAATGAGTGCAACAGATAAA+TGG 0.362829 tig0040401:+3211 Msa1459690:CDS
TAGTTGTACATTGATGCAAC+TGG 0.362849 tig0040401:-8653 None:intergenic
TGGCTCAAGGGTTGTATAGA+AGG 0.366996 tig0040401:+5112 Msa1459690:CDS
TCTTCTGTGGTGCTTACCTC+TGG 0.367506 tig0040401:+7762 Msa1459690:CDS
TTATGGAGCAAGGAAGCTTA+TGG 0.372083 tig0040401:+7079 Msa1459690:CDS
GCAAATCAATACAGAGAAAC+TGG 0.374539 tig0040401:-7560 None:intergenic
CCCAAGGAAGCTTCTCTTGT+GGG 0.376843 tig0040401:+7875 Msa1459690:CDS
GTTTGCATGCATGGATTGAT+TGG 0.382489 tig0040401:+9023 Msa1459690:three_prime_UTR
GGTGTTACCGATCCCCTCTT+TGG 0.388143 tig0040401:-9053 None:intergenic
GCTACGGCCCCAACTCTTCA+TGG 0.391637 tig0040401:+8429 Msa1459690:CDS
TTTCAGGTCTGAGCCATACT+TGG 0.392986 tig0040401:+3146 Msa1459690:intron
AGTTTATCTTCACATAGATT+AGG 0.394004 tig0040401:-2874 None:intergenic
GTGAATGTGTATAAGAAAAT+GGG 0.394580 tig0040401:+8785 Msa1459690:three_prime_UTR
CCTACTAATGAGTTTAGCTT+TGG 0.396010 tig0040401:+3610 Msa1459690:CDS
GGCAAAGACATCTGCTCAGC+AGG 0.396249 tig0040401:+3631 Msa1459690:CDS
GAAAATTACCATGAAGAGTT+GGG 0.397149 tig0040401:-8437 None:intergenic
CAGTACTGTCAATGTAACTA+TGG 0.397415 tig0040401:+2186 Msa1459690:CDS
GCATGACCATATAGCATTGT+TGG 0.399113 tig0040401:+7311 Msa1459690:CDS
GACTGACTGTCAGTTAGTTA+AGG 0.400383 tig0040401:+2378 Msa1459690:CDS
GATAAAACAGCACATACTTT+CGG 0.401471 tig0040401:-5716 None:intergenic
CATCACTAGATCATCTTCAT+AGG 0.405374 tig0040401:-2542 None:intergenic
CCAAAGCTAAACTCATTAGT+AGG 0.407654 tig0040401:-3610 None:intergenic
GTATCAAGTGGATTCTCAAA+TGG 0.409365 tig0040401:+7495 Msa1459690:CDS
TTTGAGAATCCACTTGATAC+AGG 0.416214 tig0040401:-7492 None:intergenic
TTATCTCCAACAATGCTATA+TGG 0.424741 tig0040401:-7317 None:intergenic
CATAGGATGAATCAGACCTT+AGG 0.426935 tig0040401:-2525 None:intergenic
AGCTTTATTGTAATATGATA+AGG 0.436030 tig0040401:-4573 None:intergenic
TAAGCCTAAGTTTGCATGCA+TGG 0.437263 tig0040401:+9014 Msa1459690:three_prime_UTR
TGAAGAGTTGGGGCCGTAGC+AGG 0.439083 tig0040401:-8426 None:intergenic
TCCTTGGGATGCTCAGATCA+AGG 0.439112 tig0040401:-7860 None:intergenic
ACAGAAGATTCCTTTGCATA+AGG 0.439245 tig0040401:-2634 None:intergenic
GCCCACAAGAGAAGCTTCCT+TGG 0.439832 tig0040401:-7876 None:intergenic
GTTTATATGGATTAAACCTA+AGG 0.440586 tig0040401:+2509 Msa1459690:CDS
TGGGTAGAATCAACGTCATT+TGG 0.444616 tig0040401:-8564 None:intergenic
TTACAGTAGACATCCAAGTA+TGG 0.446919 tig0040401:-3159 None:intergenic
AACGTGCATATGTTTCTCTC+CGG 0.447127 tig0040401:+5778 Msa1459690:CDS
CAGCTGTTGATCCTGTCTAT+AGG 0.448877 tig0040401:+4612 Msa1459690:CDS
TGTTCGTTTACAGGGAAGAT+TGG 0.450622 tig0040401:+4492 Msa1459690:intron
AACATCAGCACACTGTTCCT+TGG 0.451005 tig0040401:-2596 None:intergenic
GGCACCGTCTACTCCTTCTT+CGG 0.453370 tig0040401:-3589 None:intergenic
ATCCTCTGCGCTTTGAAAGC+TGG 0.453760 tig0040401:+3313 Msa1459690:CDS
TTTCCTGTCAAGAGGTCCTC+TGG 0.454529 tig0040401:-2826 None:intergenic
AATCTGATACATTAGATATC+CGG 0.459851 tig0040401:+2218 Msa1459690:CDS
CCTTGGGATGCTCAGATCAA+GGG 0.460167 tig0040401:-7859 None:intergenic
GTCCATGCTGCATCCTTTAA+GGG 0.460963 tig0040401:-4350 None:intergenic
AATAAAGCATCTCTTGGCCT+TGG 0.461847 tig0040401:+2093 Msa1459690:CDS
CCTTGGTCTGATAATCTCCC+CGG 0.466437 tig0040401:-2579 None:intergenic
CATTAGATATCCGGATGGAT+TGG 0.466592 tig0040401:+2227 Msa1459690:CDS
GTTTCAACTCCGGACATAGT+TGG 0.469938 tig0040401:-7837 None:intergenic
ATGACATGCTTGCTGAATAT+GGG 0.471778 tig0040401:+2014 Msa1459690:CDS
TATTATACATCTAGACCATT+AGG 0.472191 tig0040401:+8982 Msa1459690:three_prime_UTR
CAATCCATGCATGCAAACTT+AGG 0.475642 tig0040401:-9018 None:intergenic
ACTGACTGTCAGTTAGTTAA+GGG 0.477060 tig0040401:+2379 Msa1459690:CDS
TCATCTAGGAAATTATCAAT+TGG 0.478352 tig0040401:-2850 None:intergenic
GTGTGGTTCCGCTAAGATGC+TGG 0.479179 tig0040401:-1846 None:intergenic
TGCAAACTCCAGCATCTTAG+CGG 0.479722 tig0040401:+1838 Msa1459690:CDS
TATCAAGTGGATTCTCAAAT+GGG 0.480139 tig0040401:+7496 Msa1459690:CDS
CAGATCTCTGATCATAAAAT+GGG 0.480338 tig0040401:-4322 None:intergenic
CCACCAGAGGACCTCTTGAC+AGG 0.481460 tig0040401:+2823 Msa1459690:CDS
GGAAAATTACCATGAAGAGT+TGG 0.481876 tig0040401:-8438 None:intergenic
ATCTGTTGCACTCATTTCCT+CGG 0.481951 tig0040401:-3205 None:intergenic
ATGCAGCTTGCCTGAAATTG+AGG 0.482617 tig0040401:+7110 Msa1459690:CDS
ATTTGCAATAAAGCATCTCT+TGG 0.486634 tig0040401:+2087 Msa1459690:CDS
TTCCATCATCAGTCAAATCA+TGG 0.487640 tig0040401:-7527 None:intergenic
TTCTCTCCGGGGAGATAAGC+GGG 0.489105 tig0040401:+5791 Msa1459690:CDS
AGTGCAACAGATAAATGGCC+TGG 0.492997 tig0040401:+3216 Msa1459690:CDS
AGTTCAGAATAAAGACAGTA+AGG 0.493213 tig0040401:+2324 Msa1459690:CDS
TGATATCAGGCGCAAGACAC+CGG 0.494362 tig0040401:+5623 Msa1459690:intron
TGAACTTTCAGAAGATGAAA+GGG 0.494463 tig0040401:+2438 Msa1459690:CDS
TTAAATAGTATTACCCATAC+AGG 0.494727 tig0040401:-7155 None:intergenic
TGCGCTTGAAACTTGTGTCG+AGG 0.498389 tig0040401:+5053 Msa1459690:CDS
GCGCTTGAAACTTGTGTCGA+GGG 0.498557 tig0040401:+5054 Msa1459690:CDS
TTGTATAGAAGGGGTGAGAG+TGG 0.499028 tig0040401:+5123 Msa1459690:CDS
TGCAGCTTGCCTGAAATTGA+GGG 0.499532 tig0040401:+7111 Msa1459690:CDS
CAGATCAAGGGTTTCAACTC+CGG 0.499552 tig0040401:-7847 None:intergenic
GGCTCAAGGGTTGTATAGAA+GGG 0.503163 tig0040401:+5113 Msa1459690:CDS
TCCTTGGTCAGCACAAATCC+AGG 0.504054 tig0040401:-3234 None:intergenic
TGTCCAAGACCTCCCACATC+AGG 0.504315 tig0040401:-2952 None:intergenic
GATAAACTATCAGAGGAGGC+TGG 0.504589 tig0040401:+2889 Msa1459690:CDS
GAAGCTGTCACAAGTATCCT+TGG 0.504777 tig0040401:+4904 Msa1459690:CDS
TTTGAAAGCTGGCAGCGACT+TGG 0.505444 tig0040401:+3324 Msa1459690:CDS
CACTCCCTACTGTTGTGACA+TGG 0.506168 tig0040401:-8584 None:intergenic
TTCTTATTCCCAGCAGAACC+CGG 0.507130 tig0040401:-5642 None:intergenic
ATGAACTTTCAGAAGATGAA+AGG 0.509016 tig0040401:+2437 Msa1459690:CDS
AATGCCTTTAGATATTCCTT+CGG 0.511289 tig0040401:-2290 None:intergenic
ACGTGCATATGTTTCTCTCC+GGG 0.512551 tig0040401:+5779 Msa1459690:CDS
TAAGACCATGTTTCCTGATG+TGG 0.513573 tig0040401:+2939 Msa1459690:CDS
GATTGGAATCTCACCAAAGA+GGG 0.514940 tig0040401:+9040 Msa1459690:three_prime_UTR
ATATCAGAGAGTATCCTGTA+TGG 0.515484 tig0040401:+7141 Msa1459690:CDS
GATTTACCCGCTTATCTCCC+CGG 0.515712 tig0040401:-5797 None:intergenic
CACATAGATTAGGATCATCT+AGG 0.516471 tig0040401:-2864 None:intergenic
GGATTTGTGCTGACCAAGGA+AGG 0.517773 tig0040401:+3237 Msa1459690:CDS
GTGAGAGTGGTGATATAGAG+AGG 0.517993 tig0040401:+5136 Msa1459690:CDS
TCAGAGGAGGCTGGGTCTGA+AGG 0.518703 tig0040401:+2898 Msa1459690:CDS
ATTTGACAAAGGCTGCTTGT+TGG 0.521794 tig0040401:-1691 None:intergenic
GCTAGATACATGCTGGCTCA+AGG 0.524293 tig0040401:+5099 Msa1459690:CDS
AAATACTTTCCGATAGCCAC+TGG 0.524738 tig0040401:-6961 None:intergenic
GTCCATGATTTGACTGATGA+TGG 0.525942 tig0040401:+7525 Msa1459690:CDS
GTGTGAGATACATGAGTTGT+TGG 0.528044 tig0040401:+4265 Msa1459690:intron
TTGCCTGAAATTGAGGGCCC+TGG 0.529123 tig0040401:+7117 Msa1459690:CDS
CTCAAACTATTGGAGGAGAC+AGG 0.530746 tig0040401:+5738 Msa1459690:CDS
CTGTGGAAACAAAGCATGAA+GGG 0.532971 tig0040401:+4980 Msa1459690:CDS
CCCACAAGAGAAGCTTCCTT+GGG 0.534341 tig0040401:-7875 None:intergenic
CCGTTCGATCCAACTATGTC+CGG 0.534542 tig0040401:+7828 Msa1459690:CDS
TCCACTCTCTCAGATAAAGT+AGG 0.535432 tig0040401:-3560 None:intergenic
TCTACCCATGTCACAACAGT+AGG 0.535545 tig0040401:+8579 Msa1459690:CDS
CAATTCTGGTCCAATCCATC+CGG 0.535755 tig0040401:-2237 None:intergenic
AGCAAGCACATTAACGTAGT+AGG 0.535784 tig0040401:+3524 Msa1459690:CDS
CAGAAGCAGTAGTCTGAGAA+TGG 0.535856 tig0040401:-7008 None:intergenic
GGTTCTGCTGGGAATAAGAA+AGG 0.536080 tig0040401:+5645 Msa1459690:CDS
GATACATGAGTTGTTGGCAT+TGG 0.537894 tig0040401:+4271 Msa1459690:CDS
GGAACTCAAACATTTCCATA+AGG 0.540936 tig0040401:+5077 Msa1459690:CDS
CTTAAAGGATGCAGCATGGA+CGG 0.541350 tig0040401:+4352 Msa1459690:CDS
GTCTCTGTTACTAATTGAGA+TGG 0.541712 tig0040401:-7804 None:intergenic
GAGTGGAAACAAGCCGAAGA+AGG 0.542720 tig0040401:+3576 Msa1459690:CDS
GAATATGGGCTTTGCTGTGT+CGG 0.544968 tig0040401:+2028 Msa1459690:CDS
GCTTACAAACTCGCCTGCTA+CGG 0.546696 tig0040401:+8413 Msa1459690:CDS
GAGGCATGCATCCTATAGAC+AGG 0.547988 tig0040401:-4623 None:intergenic
CACAAGTTTCAAGCGCAGAA+AGG 0.549187 tig0040401:-5047 None:intergenic
GCAAGACACCGGGTTCTGCT+GGG 0.550778 tig0040401:+5634 Msa1459690:CDS
TGGGCCTATGTGCTAGTGCA+TGG 0.551435 tig0040401:+7894 Msa1459690:CDS
CTTTGCTGTGTCGGTGAAGG+TGG 0.552483 tig0040401:+2037 Msa1459690:CDS
GATATCAGGCGCAAGACACC+GGG 0.552516 tig0040401:+5624 Msa1459690:intron
TGATAGCTCTTAAAACTCTA+CGG 0.553183 tig0040401:-2783 None:intergenic
ATAAACTATCAGAGGAGGCT+GGG 0.553461 tig0040401:+2890 Msa1459690:CDS
TGTTTCTTAGAAAACTGGAC+TGG 0.553923 tig0040401:+2753 Msa1459690:intron
AGGATACTCTCTGATATACC+AGG 0.554815 tig0040401:-7135 None:intergenic
TTTGCTTTATTTATGGAGCA+AGG 0.555543 tig0040401:+7069 Msa1459690:CDS
CTAGATACATGCTGGCTCAA+GGG 0.556412 tig0040401:+5100 Msa1459690:CDS
GGATTTAAACTTCATATCCA+AGG 0.561504 tig0040401:-2110 None:intergenic
CCATAAGGCTAGATACATGC+TGG 0.563890 tig0040401:+5092 Msa1459690:CDS
GAAGGTGGCAAAGGTGGAGA+AGG 0.565297 tig0040401:+2052 Msa1459690:CDS
GTTGTAGGTAGCAGTAGAAG+TGG 0.566467 tig0040401:+8540 Msa1459690:intron
TGATTTGACTGATGATGGAA+TGG 0.566609 tig0040401:+7530 Msa1459690:CDS
TAGCTCATCTTTAAATACAA+AGG 0.567923 tig0040401:+4936 Msa1459690:CDS
GAAAATGGGGTGACCATGGT+AGG 0.568087 tig0040401:+8799 Msa1459690:three_prime_UTR
GTGCAGTCAAAGATGAAAAG+AGG 0.568405 tig0040401:+8372 Msa1459690:intron
TCAAAGATGAAAAGAGGGAG+TGG 0.569280 tig0040401:+8378 Msa1459690:CDS
AATTACACATGCTTTATGGT+AGG 0.569600 tig0040401:+9103 Msa1459690:three_prime_UTR
CGCTTGAAACTTGTGTCGAG+GGG 0.571077 tig0040401:+5055 Msa1459690:CDS
CAATTGGATTTCCTGTCAAG+AGG 0.571240 tig0040401:-2834 None:intergenic
TCAATGAAGAAAGATGTAAG+AGG 0.573683 tig0040401:+8869 Msa1459690:three_prime_UTR
ATTTGTGCTGACCAAGGAAG+GGG 0.577007 tig0040401:+3239 Msa1459690:CDS
AAATAATAGTTTCAAGCGTG+AGG 0.577070 tig0040401:-4642 None:intergenic
TACTAAAATTGGATACTGCA+TGG 0.577199 tig0040401:+5004 Msa1459690:CDS
GTTTCCGAAGGAATATCTAA+AGG 0.577505 tig0040401:+2286 Msa1459690:CDS
ATAACACAACACTGTTGAAG+AGG 0.579324 tig0040401:+2977 Msa1459690:CDS
GATCTTGTACCAGTGGCTAT+CGG 0.580103 tig0040401:+6952 Msa1459690:CDS
GTATGTTCTTCCTTATGCAA+AGG 0.581214 tig0040401:+2624 Msa1459690:CDS
ACATTGTCAGAACTACTCAC+TGG 0.582734 tig0040401:-7033 None:intergenic
TCCTACTTTATCTGAGAGAG+TGG 0.583147 tig0040401:+3559 Msa1459690:CDS
AGTTGTACATTGATGCAACT+GGG 0.583978 tig0040401:-8652 None:intergenic
TCATTTCTTGGCTCTGTCCG+AGG 0.585731 tig0040401:+3188 Msa1459690:CDS
CATCATTTACCATAAACATG+TGG 0.587138 tig0040401:+5199 Msa1459690:CDS
ACCTCCCACATCAGGAAACA+TGG 0.588407 tig0040401:-2944 None:intergenic
GTCGGTGAAGGTGGCAAAGG+TGG 0.588547 tig0040401:+2046 Msa1459690:CDS
ACTCCCTACTGTTGTGACAT+GGG 0.588605 tig0040401:-8583 None:intergenic
GGGCTTTGCTGTGTCGGTGA+AGG 0.588643 tig0040401:+2034 Msa1459690:CDS
TGAGAGTGGTGATATAGAGA+GGG 0.588940 tig0040401:+5137 Msa1459690:CDS
TAGATTCTTCTGAATGTCAT+CGG 0.589020 tig0040401:-8619 None:intergenic
CCTGTCAAGAGGTCCTCTGG+TGG 0.589761 tig0040401:-2823 None:intergenic
ATCATTTACCATAAACATGT+GGG 0.591726 tig0040401:+5200 Msa1459690:CDS
CATGAGTAATGAGACTGACA+TGG 0.592767 tig0040401:-9194 None:intergenic
CATTGAAGATCTTGTACCAG+TGG 0.593799 tig0040401:+6945 Msa1459690:CDS
TATCAGAGAGTATCCTGTAT+GGG 0.594656 tig0040401:+7142 Msa1459690:CDS
AAGACCATGTTTCCTGATGT+GGG 0.598107 tig0040401:+2940 Msa1459690:CDS
AGCACATTAACGTAGTAGGA+TGG 0.598601 tig0040401:+3528 Msa1459690:CDS
ATGAGCTATCTGTGCTGCCA+AGG 0.599454 tig0040401:-4921 None:intergenic
TACAGATTGATCAAAGGCGT+AGG 0.599849 tig0040401:-4878 None:intergenic
CAAATCACTCCTGTATCAAG+TGG 0.600092 tig0040401:+7483 Msa1459690:CDS
TTACCGGGAGAGTTCTTCTG+TGG 0.600891 tig0040401:+7749 Msa1459690:CDS
TCTGTGGAAACAAAGCATGA+AGG 0.601277 tig0040401:+4979 Msa1459690:CDS
ACAGAATGCAGAGATTCTGA+AGG 0.603422 tig0040401:+4676 Msa1459690:CDS
TCCCAAGGAAGCTTCTCTTG+TGG 0.603911 tig0040401:+7874 Msa1459690:CDS
ATGTATCAATGCCAATTCTG+TGG 0.604615 tig0040401:+4963 Msa1459690:CDS
GATTTGTGCTGACCAAGGAA+GGG 0.604835 tig0040401:+3238 Msa1459690:CDS
GCAGGCGAGTTTGTAAGCGC+AGG 0.605117 tig0040401:-8408 None:intergenic
ACTTGGAAATATTTATGATG+AGG 0.606234 tig0040401:+3341 Msa1459690:CDS
TGCCCTTAAAGGATGCAGCA+TGG 0.609904 tig0040401:+4348 Msa1459690:CDS
CCCTTGATCTGAGCATCCCA+AGG 0.613647 tig0040401:+7859 Msa1459690:CDS
ATCAGAGATTACTTGTGCCG+AGG 0.614366 tig0040401:-1773 None:intergenic
GCAGAGATTGCATTTGACAA+AGG 0.617325 tig0040401:-1702 None:intergenic
ATGGAATTACATAAAAGTTG+AGG 0.617651 tig0040401:-7785 None:intergenic
GCACCACAGAAGAACTCTCC+CGG 0.617865 tig0040401:-7752 None:intergenic
TGATTGGAATCTCACCAAAG+AGG 0.621132 tig0040401:+9039 Msa1459690:three_prime_UTR
GAGGACATACTTAAGTGCGA+AGG 0.623077 tig0040401:-4411 None:intergenic
CAAGCCGAAGAAGGAGTAGA+CGG 0.623782 tig0040401:+3585 Msa1459690:CDS
GAGTAGTTCTGACAATGTGT+TGG 0.625077 tig0040401:+7038 Msa1459690:CDS
ACAAGTAATCTCTGATCAAG+TGG 0.625155 tig0040401:+1780 Msa1459690:CDS
TTTCTCTCCGGGGAGATAAG+CGG 0.626453 tig0040401:+5790 Msa1459690:CDS
ATGTGAAGATAAACTATCAG+AGG 0.626603 tig0040401:+2882 Msa1459690:CDS
ACGTCCATGCACTAGCACAT+AGG 0.627324 tig0040401:-7898 None:intergenic
ATAAGAAAATGGGGTGACCA+TGG 0.629787 tig0040401:+8795 Msa1459690:three_prime_UTR
TGCAGTCAAAGATGAAAAGA+GGG 0.629896 tig0040401:+8373 Msa1459690:intron
TGTGTCGGTGAAGGTGGCAA+AGG 0.635270 tig0040401:+2043 Msa1459690:CDS
CATGTCACAACAGTAGGGAG+TGG 0.637074 tig0040401:+8585 Msa1459690:CDS
GCATTGTGAAGAAATTTCGA+AGG 0.637928 tig0040401:+7947 Msa1459690:CDS
TACATAAAAGTTGAGGCCAG+AGG 0.638609 tig0040401:-7778 None:intergenic
GCTCAAGGGTTGTATAGAAG+GGG 0.642293 tig0040401:+5114 Msa1459690:CDS
TGAATGTGTATAAGAAAATG+GGG 0.642928 tig0040401:+8786 Msa1459690:three_prime_UTR
TGAAGATAAACTATCAGAGG+AGG 0.644438 tig0040401:+2885 Msa1459690:CDS
CTACCCATGTCACAACAGTA+GGG 0.645735 tig0040401:+8580 Msa1459690:CDS
GTAGATTTGTTACTTAACGA+TGG 0.646292 tig0040401:+3500 Msa1459690:CDS
AATCTCACCAAAGAGGGGAT+CGG 0.647574 tig0040401:+9046 Msa1459690:three_prime_UTR
AAAATTACCATGAAGAGTTG+GGG 0.650912 tig0040401:-8436 None:intergenic
TTGAAACTATTATTTAAGCG+CGG 0.651066 tig0040401:+4650 Msa1459690:CDS
CCGGACATAGTTGGATCGAA+CGG 0.651408 tig0040401:-7828 None:intergenic
GCAACAGCATTATGACACAC+AGG 0.652338 tig0040401:-8916 None:intergenic
TGGGAATAAGAAAGGCCTTG+AGG 0.653945 tig0040401:+5653 Msa1459690:CDS
TTTCTGGTAAGTTAACCTCA+AGG 0.654007 tig0040401:-5668 None:intergenic
TGCCAGCTTTCAAAGCGCAG+AGG 0.657862 tig0040401:-3315 None:intergenic
TGCACGGATTCAACCTACCA+TGG 0.658915 tig0040401:-8812 None:intergenic
ACATTAACGTAGTAGGATGG+AGG 0.659421 tig0040401:+3531 Msa1459690:CDS
ACACTTTCTTCAGCCACCAG+AGG 0.659604 tig0040401:+2810 Msa1459690:CDS
CGTGCATATGTTTCTCTCCG+GGG 0.664622 tig0040401:+5780 Msa1459690:CDS
CCGGGGAGATTATCAGACCA+AGG 0.667952 tig0040401:+2579 Msa1459690:CDS
GCCTGGATTTGTGCTGACCA+AGG 0.675397 tig0040401:+3233 Msa1459690:CDS
GGATACTCTCTGATATACCA+GGG 0.675463 tig0040401:-7134 None:intergenic
GCTTGAAACTTGTGTCGAGG+GGG 0.676020 tig0040401:+5056 Msa1459690:CDS
GCTGTATTCCATATTTCACG+TGG 0.677496 tig0040401:-7585 None:intergenic
TGATACATTAGATATCCGGA+TGG 0.677527 tig0040401:+2222 Msa1459690:CDS
GTTGTACATTGATGCAACTG+GGG 0.679081 tig0040401:-8651 None:intergenic
ATTGGAATCTCACCAAAGAG+GGG 0.681302 tig0040401:+9041 Msa1459690:three_prime_UTR
ACTTGTCTGTAACAAAACCT+CGG 0.682353 tig0040401:+1756 Msa1459690:CDS
CTGGAGTTTGCAGAAAACAA+TGG 0.682930 tig0040401:-1827 None:intergenic
CAACAGCATTATGACACACA+GGG 0.686776 tig0040401:-8915 None:intergenic
GGCTGCTTGTTGGAACTGTG+AGG 0.693331 tig0040401:-1681 None:intergenic
AGTAGTCTGAGAATGGCGCA+TGG 0.696393 tig0040401:-7001 None:intergenic
ACCATGTTTCCTGATGTGGG+AGG 0.709193 tig0040401:+2943 Msa1459690:CDS
GTACAACTAACGATGCTGAG+AGG 0.711995 tig0040401:+8667 Msa1459690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGTTATTCATTTTTTTAAT+TGG + tig0040401:1933-1952 Msa1459690:intron 10.0%
!!! AAATAAAAAAATTGCAATTT+TGG - tig0040401:2713-2732 None:intergenic 10.0%
!! TGAATTATAATTTCTAAATA+AGG - tig0040401:5830-5849 None:intergenic 10.0%
!! TATAATTCATATAACAATTA+CGG + tig0040401:5841-5860 Msa1459690:intron 10.0%
!!! GATTTTATAATAAAATATAC+AGG - tig0040401:6125-6144 None:intergenic 10.0%
!! AAAATTGGAAAGAAAAAAAA+AGG - tig0040401:1207-1226 None:intergenic 15.0%
!! AAAATAAAGTTTATGACAAA+GGG - tig0040401:1509-1528 None:intergenic 15.0%
!! AAAAATAAAGTTTATGACAA+AGG - tig0040401:1510-1529 None:intergenic 15.0%
!!! TTTATTTTTAAGGTTAAAGA+TGG - tig0040401:2134-2153 None:intergenic 15.0%
!!! GAAATTTTATAATGTTTAAC+AGG - tig0040401:3448-3467 None:intergenic 15.0%
!! AAAATTTCATATATGTTTCT+TGG + tig0040401:3460-3479 Msa1459690:intron 15.0%
!!! TTTTTAAATTTTTCTTCTCT+TGG + tig0040401:3682-3701 Msa1459690:intron 15.0%
!!! ATTTTTATTGCACATTTTTT+TGG - tig0040401:3867-3886 None:intergenic 15.0%
!! ATTAAGTTTAAACTAACAAA+AGG - tig0040401:5322-5341 None:intergenic 15.0%
!! CAAGTTATATAAAACAAATT+GGG - tig0040401:5495-5514 None:intergenic 15.0%
!! TCAAGTTATATAAAACAAAT+TGG - tig0040401:5496-5515 None:intergenic 15.0%
!!! AATTTGTTTTATATAACTTG+AGG + tig0040401:5495-5514 Msa1459690:intron 15.0%
!! AATTTCTAAATAAGGATTTA+GGG - tig0040401:5822-5841 None:intergenic 15.0%
!! TAATTTCTAAATAAGGATTT+AGG - tig0040401:5823-5842 None:intergenic 15.0%
!! AAAATATGTCTTTATAGATA+TGG + tig0040401:5988-6007 Msa1459690:intron 15.0%
!! TTTATTATTGTTTAAGAACT+AGG - tig0040401:6334-6353 None:intergenic 15.0%
!! AATATAACAAGAAATTATGT+GGG - tig0040401:6851-6870 None:intergenic 15.0%
!! AAATATAACAAGAAATTATG+TGG - tig0040401:6852-6871 None:intergenic 15.0%
!! TAGAAAATATCAAAACAAAA+TGG + tig0040401:7628-7647 Msa1459690:CDS 15.0%
!!! ATCCTTTATTTTTGATAAAA+TGG - tig0040401:7658-7677 None:intergenic 15.0%
!! ATAAAAAACAATAATAGGTT+TGG + tig0040401:8468-8487 Msa1459690:intron 15.0%
!!! TAAAACTTCAAAATTTTACA+AGG - tig0040401:8747-8766 None:intergenic 15.0%
!!! ATTGAAAGTCAATTTTTTGA+TGG + tig0040401:394-413 Msa1459690:CDS 20.0%
!!! AAGAAAGTTATTGATCATTT+TGG + tig0040401:842-861 Msa1459690:CDS 20.0%
!!! AGACTTATTTTACCATATTA+AGG - tig0040401:1053-1072 None:intergenic 20.0%
!!! TGTTTGCTTATTGATTTTTT+GGG + tig0040401:1106-1125 Msa1459690:intron 20.0%
!!! TTTTTCTTTCCAATTTTTAG+AGG + tig0040401:1210-1229 Msa1459690:intron 20.0%
!!! TTTTCTTTCCAATTTTTAGA+GGG + tig0040401:1211-1230 Msa1459690:intron 20.0%
!! TATAATCTTACTTTCAATGA+TGG + tig0040401:1903-1922 Msa1459690:intron 20.0%
!!! GCATTGATTCTTTATTTTTA+AGG - tig0040401:2144-2163 None:intergenic 20.0%
!!! TTTTATGTTTCTTAGAAAAC+TGG + tig0040401:2748-2767 Msa1459690:intron 20.0%
!! TTCCTATGAATCATATTTAA+TGG + tig0040401:3062-3081 Msa1459690:intron 20.0%
!! TTATTAAAACCTTGATTCTT+CGG + tig0040401:3385-3404 Msa1459690:intron 20.0%
!! ACTTGAATAAATAAACTCTT+GGG + tig0040401:3957-3976 Msa1459690:intron 20.0%
!!! GAATCGTGTTTTTTTTTAAA+AGG - tig0040401:4034-4053 None:intergenic 20.0%
!!! AGCTTTATTGTAATATGATA+AGG - tig0040401:4576-4595 None:intergenic 20.0%
!! CAAGTCAACTATAAAATTAT+AGG - tig0040401:4796-4815 None:intergenic 20.0%
!!! CTTTTCACTTGTATTATTAT+TGG + tig0040401:5281-5300 Msa1459690:intron 20.0%
!! TATATAAAACAAATTGGGAA+AGG - tig0040401:5490-5509 None:intergenic 20.0%
!!! ATCAAATGTTATTTATTGAG+TGG - tig0040401:5526-5545 None:intergenic 20.0%
!! ACTCAATAAATAACATTTGA+TGG + tig0040401:5525-5544 Msa1459690:intron 20.0%
!! TTATTTCCTGTTAGATAATA+AGG + tig0040401:5963-5982 Msa1459690:intron 20.0%
!! TGCAAATACTGAAATAAAAA+GGG - tig0040401:6628-6647 None:intergenic 20.0%
!! ATGCAAATACTGAAATAAAA+AGG - tig0040401:6629-6648 None:intergenic 20.0%
!! TGCAAATACTGAAATAAAAA+GGG - tig0040401:6628-6647 None:intergenic 20.0%
!! ATGCAAATACTGAAATAAAA+AGG - tig0040401:6629-6648 None:intergenic 20.0%
!!! TGCCATTTTATCAAAAATAA+AGG + tig0040401:7653-7672 Msa1459690:CDS 20.0%
!!! TTTTATAGATTTTCACTTCT+AGG + tig0040401:8139-8158 Msa1459690:intron 20.0%
!!! TTTATAGATTTTCACTTCTA+GGG + tig0040401:8140-8159 Msa1459690:intron 20.0%
!!! TTATTGTTTTTTATTGAGGA+TGG - tig0040401:8462-8481 None:intergenic 20.0%
!!! CCTATTATTGTTTTTTATTG+AGG - tig0040401:8466-8485 None:intergenic 20.0%
!! CCTCAATAAAAAACAATAAT+AGG + tig0040401:8463-8482 Msa1459690:intron 20.0%
!!! TTATTTTTCATAGAAATGCA+CGG - tig0040401:8831-8850 None:intergenic 20.0%
!! TTTCTATGAAAAATAATGCA+TGG + tig0040401:8835-8854 Msa1459690:three_prime_UTR 20.0%
!! CAATTCATTTTCTTTATGCA+TGG + tig0040401:511-530 Msa1459690:CDS 25.0%
! AAATACATATCTACATCCAT+TGG - tig0040401:617-636 None:intergenic 25.0%
! CAGAAAACTGAAAATACTTA+TGG + tig0040401:649-668 Msa1459690:CDS 25.0%
!!! AAAATACTTATGGCATTGAT+GGG + tig0040401:659-678 Msa1459690:CDS 25.0%
! TGTTCAATGATATTTACTCA+CGG - tig0040401:873-892 None:intergenic 25.0%
! AATATCATTGAACATAGTCT+TGG + tig0040401:879-898 Msa1459690:intron 25.0%
!!! ATTTTAAAGAAATACACCTC+AGG - tig0040401:922-941 None:intergenic 25.0%
! CATTAGTTAAAACATACCTA+CGG + tig0040401:1020-1039 Msa1459690:intron 25.0%
!!! CTTATTTTACCATATTAAGG+AGG - tig0040401:1050-1069 None:intergenic 25.0%
!!! GTGTTTGCTTATTGATTTTT+TGG + tig0040401:1105-1124 Msa1459690:intron 25.0%
!!! TTTCTTTCCAATTTTTAGAG+GGG + tig0040401:1212-1231 Msa1459690:intron 25.0%
! GAATTTCCATTTCTGATATA+TGG + tig0040401:1387-1406 Msa1459690:intron 25.0%
! TAATCCAAGTTAATGTTACA+TGG + tig0040401:1567-1586 Msa1459690:intron 25.0%
! AAAACCATGTAACATTAACT+TGG - tig0040401:1574-1593 None:intergenic 25.0%
! AAAGTAAGATTATATCACGA+AGG - tig0040401:1897-1916 None:intergenic 25.0%
! AATCTGATACATTAGATATC+CGG + tig0040401:2218-2237 Msa1459690:CDS 25.0%
!! GTTTATATGGATTAAACCTA+AGG + tig0040401:2509-2528 Msa1459690:CDS 25.0%
! TCATCTAGGAAATTATCAAT+TGG - tig0040401:2853-2872 None:intergenic 25.0%
! AGTTTATCTTCACATAGATT+AGG - tig0040401:2877-2896 None:intergenic 25.0%
! TGTGGAAAAAAAAAACAGTA+TGG - tig0040401:3015-3034 None:intergenic 25.0%
! AGCCATTAAATATGATTCAT+AGG - tig0040401:3067-3086 None:intergenic 25.0%
! GATAAAAACAAGGAATATCA+TGG - tig0040401:3099-3118 None:intergenic 25.0%
!!! TTCCTTGTTTTTATCTTCTT+AGG + tig0040401:3104-3123 Msa1459690:intron 25.0%
! AACCTAAGAAGATAAAAACA+AGG - tig0040401:3109-3128 None:intergenic 25.0%
!!! ATCTCAGTTTTTTTACTTTC+AGG + tig0040401:3130-3149 Msa1459690:intron 25.0%
! ACTTGGAAATATTTATGATG+AGG + tig0040401:3341-3360 Msa1459690:CDS 25.0%
! AGGTAAGTTTAAATGCAATT+TGG + tig0040401:3361-3380 Msa1459690:intron 25.0%
! AAAATGTCGGACAATATTTA+AGG + tig0040401:3841-3860 Msa1459690:intron 25.0%
! CACTTGAATAAATAAACTCT+TGG + tig0040401:3956-3975 Msa1459690:intron 25.0%
! AAAATAAGACACAAGATAAG+AGG - tig0040401:4433-4452 None:intergenic 25.0%
! TTGAAACTATTATTTAAGCG+CGG + tig0040401:4650-4669 Msa1459690:CDS 25.0%
!! TTCTTTTACAGATTGATCAA+AGG - tig0040401:4887-4906 None:intergenic 25.0%
! TAGCTCATCTTTAAATACAA+AGG + tig0040401:4936-4955 Msa1459690:CDS 25.0%
! ATCATTTACCATAAACATGT+GGG + tig0040401:5200-5219 Msa1459690:CDS 25.0%
!! ATTGATAGCATGACAAAAAA+AGG + tig0040401:5225-5244 Msa1459690:CDS 25.0%
!! TAGAAATACCAAAGTATTTG+TGG - tig0040401:5403-5422 None:intergenic 25.0%
!! ATTTGAAATATACAATCTCG+TGG + tig0040401:5438-5457 Msa1459690:intron 25.0%
!! GTAGAAATTAGTTTAGGAAT+TGG - tig0040401:5592-5611 None:intergenic 25.0%
!! TGCAAAGTAGAAATTAGTTT+AGG - tig0040401:5598-5617 None:intergenic 25.0%
! ACTTTGCATTTAATGATATC+AGG + tig0040401:5610-5629 Msa1459690:intron 25.0%
!! TTTTCACCTTATTATCTAAC+AGG - tig0040401:5972-5991 None:intergenic 25.0%
! GAAATCTGATAGTAAATTGA+AGG + tig0040401:6059-6078 Msa1459690:intron 25.0%
!!! AATTTTTTAGCTGAGACAAA+GGG - tig0040401:6198-6217 None:intergenic 25.0%
!!! TAATTTTTTAGCTGAGACAA+AGG - tig0040401:6199-6218 None:intergenic 25.0%
! TATCAAATCCAAACATAATC+TGG + tig0040401:6224-6243 Msa1459690:intron 25.0%
! ATTATTGTTTAAGAACTAGG+AGG - tig0040401:6331-6350 None:intergenic 25.0%
! AATACTGAAATAAAAAGGGA+GGG - tig0040401:6624-6643 None:intergenic 25.0%
! AAATACTGAAATAAAAAGGG+AGG - tig0040401:6625-6644 None:intergenic 25.0%
! AATACTGAAATAAAAAGGGA+GGG - tig0040401:6624-6643 None:intergenic 25.0%
! AAATACTGAAATAAAAAGGG+AGG - tig0040401:6625-6644 None:intergenic 25.0%
! TGACTAATGCATAATATTAC+CGG - tig0040401:6817-6836 None:intergenic 25.0%
! TACTTTCAAATCTGATGAAA+GGG - tig0040401:6880-6899 None:intergenic 25.0%
! TTACTTTCAAATCTGATGAA+AGG - tig0040401:6881-6900 None:intergenic 25.0%
!!! GAGAATGTTTGCTTTATTTA+TGG + tig0040401:7062-7081 Msa1459690:CDS 25.0%
! TTAAATAGTATTACCCATAC+AGG - tig0040401:7158-7177 None:intergenic 25.0%
! ATTATTTGAGGATCTGAATT+AGG - tig0040401:7280-7299 None:intergenic 25.0%
! TCGATCTCTTATATACAATT+TGG + tig0040401:7458-7477 Msa1459690:CDS 25.0%
! ATGGAATTACATAAAAGTTG+AGG - tig0040401:7788-7807 None:intergenic 25.0%
! TATTAGCAAAAAACCTAGAT+GGG + tig0040401:7996-8015 Msa1459690:intron 25.0%
! TTTATGACAATGTTTGAGAA+AGG + tig0040401:8082-8101 Msa1459690:intron 25.0%
!! TTATAGATTTTCACTTCTAG+GGG + tig0040401:8141-8160 Msa1459690:intron 25.0%
! GAAACAAATATAAGGATTCA+TGG - tig0040401:8348-8367 None:intergenic 25.0%
!!! AATCCTTATATTTGTTTCTG+TGG + tig0040401:8350-8369 Msa1459690:intron 25.0%
! ATGCAAGTCTTTATAAGAAA+AGG + tig0040401:8494-8513 Msa1459690:intron 25.0%
! TGTGAATGTGTATAAGAAAA+TGG + tig0040401:8784-8803 Msa1459690:three_prime_UTR 25.0%
! GTGAATGTGTATAAGAAAAT+GGG + tig0040401:8785-8804 Msa1459690:three_prime_UTR 25.0%
! TGAATGTGTATAAGAAAATG+GGG + tig0040401:8786-8805 Msa1459690:three_prime_UTR 25.0%
! TATGAAAAATAATGCATGGT+AGG + tig0040401:8839-8858 Msa1459690:three_prime_UTR 25.0%
! TATTATACATCTAGACCATT+AGG + tig0040401:8982-9001 Msa1459690:three_prime_UTR 25.0%
! AAAAAAATATCTCAGCTCAA+GGG - tig0040401:9078-9097 None:intergenic 25.0%
! TAAAAAAATATCTCAGCTCA+AGG - tig0040401:9079-9098 None:intergenic 25.0%
TAAATTGCAACCTTCATTCA+AGG - tig0040401:75-94 None:intergenic 30.0%
GAAGGTTGCAATTTAATTGA+CGG + tig0040401:80-99 Msa1459690:CDS 30.0%
! CAAATCTGAAATATTCTCAG+TGG - tig0040401:141-160 None:intergenic 30.0%
CACTGAGAATATTTCAGATT+TGG + tig0040401:139-158 Msa1459690:CDS 30.0%
TGATGAAAAACAGTTCATTC+TGG + tig0040401:174-193 Msa1459690:CDS 30.0%
!!! TTGTATTGCTTTGTCACTTT+TGG + tig0040401:268-287 Msa1459690:CDS 30.0%
!!! TTTGTCACTTTTGGCAAAAA+GGG + tig0040401:277-296 Msa1459690:CDS 30.0%
TTTGGCAAAAAGGGAAAAAA+TGG + tig0040401:286-305 Msa1459690:CDS 30.0%
!! GATGGAACAAGAAAAGTATT+TGG + tig0040401:436-455 Msa1459690:CDS 30.0%
! GAAAATACTTATGGCATTGA+TGG + tig0040401:658-677 Msa1459690:CDS 30.0%
AAATCTTCTGATCAAACACT+CGG + tig0040401:707-726 Msa1459690:CDS 30.0%
TTAACGACATGTATAGTTCA+TGG - tig0040401:969-988 None:intergenic 30.0%
!!! CGTAGGTATGTTTTAACTAA+TGG - tig0040401:1022-1041 None:intergenic 30.0%
AATTCTTCAAGAAATCTGTC+CGG - tig0040401:1132-1151 None:intergenic 30.0%
AAGAATTCAAACAGATTGAC+AGG + tig0040401:1145-1164 Msa1459690:intron 30.0%
!! TTCTTTCCAATTTTTAGAGG+GGG + tig0040401:1213-1232 Msa1459690:intron 30.0%
TAAAGTTTATGACAAAGGGA+TGG - tig0040401:1505-1524 None:intergenic 30.0%
!! GTTAATGTTACATGGTTTTG+TGG + tig0040401:1575-1594 Msa1459690:intron 30.0%
AAGGACATTCTACAGTAAAA+TGG - tig0040401:1622-1641 None:intergenic 30.0%
ATTTGTGTTAATGCATTTGC+AGG + tig0040401:1654-1673 Msa1459690:intron 30.0%
!! TAGCTAACTTGAGTTTTGAT+AGG - tig0040401:1871-1890 None:intergenic 30.0%
CAATTAAATCAACCTGAGTT+GGG - tig0040401:1985-2004 None:intergenic 30.0%
! ATTTGCAATAAAGCATCTCT+TGG + tig0040401:2087-2106 Msa1459690:CDS 30.0%
GGATTTAAACTTCATATCCA+AGG - tig0040401:2113-2132 None:intergenic 30.0%
! TACATTGACAGTACTGTTTT+TGG - tig0040401:2182-2201 None:intergenic 30.0%
AGAGGTAATTTCATCAATTC+TGG - tig0040401:2254-2273 None:intergenic 30.0%
TGAAATTACCTCTGTCAAAA+AGG + tig0040401:2261-2280 Msa1459690:CDS 30.0%
AATGCCTTTAGATATTCCTT+CGG - tig0040401:2293-2312 None:intergenic 30.0%
AGTTCAGAATAAAGACAGTA+AGG + tig0040401:2324-2343 Msa1459690:CDS 30.0%
ATGAACTTTCAGAAGATGAA+AGG + tig0040401:2437-2456 Msa1459690:CDS 30.0%
TGAACTTTCAGAAGATGAAA+GGG + tig0040401:2438-2457 Msa1459690:CDS 30.0%
!!! CAGTGCTTTTTCTGTTTATA+TGG + tig0040401:2496-2515 Msa1459690:CDS 30.0%
TGATAGCTCTTAAAACTCTA+CGG - tig0040401:2786-2805 None:intergenic 30.0%
ATGTGAAGATAAACTATCAG+AGG + tig0040401:2882-2901 Msa1459690:CDS 30.0%
GAATAATATATGTGTGTGTG+TGG - tig0040401:3033-3052 None:intergenic 30.0%
! CTGTAACTTGTATCATTTCT+TGG + tig0040401:3176-3195 Msa1459690:CDS 30.0%
AAATGAGTGCAACAGATAAA+TGG + tig0040401:3211-3230 Msa1459690:CDS 30.0%
ATGAATATTCCGAAGAATCA+AGG - tig0040401:3397-3416 None:intergenic 30.0%
TAAGTAACAAATCTACTTCC+TGG - tig0040401:3496-3515 None:intergenic 30.0%
!! GTAGATTTGTTACTTAACGA+TGG + tig0040401:3500-3519 Msa1459690:CDS 30.0%
ACATTTGGATGGAATGTTTA+GGG - tig0040401:3795-3814 None:intergenic 30.0%
AACATTTGGATGGAATGTTT+AGG - tig0040401:3796-3815 None:intergenic 30.0%
AGTTAAGTGCAGATAACATT+TGG - tig0040401:3810-3829 None:intergenic 30.0%
CTTTCGTTTACTCAAAATGT+CGG + tig0040401:3828-3847 Msa1459690:intron 30.0%
ACAGAATCAATATGTTTACC+TGG - tig0040401:4009-4028 None:intergenic 30.0%
TGTGTATTTATTGTGTTTCC+TGG + tig0040401:4071-4090 Msa1459690:intron 30.0%
CAGATCTCTGATCATAAAAT+GGG - tig0040401:4325-4344 None:intergenic 30.0%
ACAGATCTCTGATCATAAAA+TGG - tig0040401:4326-4345 None:intergenic 30.0%
!!! TCTTATTTTATGCGCTTATC+TGG + tig0040401:4444-4463 Msa1459690:intron 30.0%
AAATAATAGTTTCAAGCGTG+AGG - tig0040401:4645-4664 None:intergenic 30.0%
!! TTATAGTTGACTTGATGATC+TGG + tig0040401:4802-4821 Msa1459690:intron 30.0%
TACTAAAATTGGATACTGCA+TGG + tig0040401:5004-5023 Msa1459690:CDS 30.0%
CATCATTTACCATAAACATG+TGG + tig0040401:5199-5218 Msa1459690:CDS 30.0%
ATCAATTTCCCACATGTTTA+TGG - tig0040401:5211-5230 None:intergenic 30.0%
ATAGCATGACAAAAAAAGGA+AGG + tig0040401:5229-5248 Msa1459690:CDS 30.0%
CAAGTGAAAAGATAACAGAA+AGG - tig0040401:5272-5291 None:intergenic 30.0%
CAGAAACAGTTGATTATTGA+TGG + tig0040401:5358-5377 Msa1459690:intron 30.0%
! ATTATTGATGGCTCATACAA+TGG + tig0040401:5370-5389 Msa1459690:intron 30.0%
! TTATTGATGGCTCATACAAT+GGG + tig0040401:5371-5390 Msa1459690:intron 30.0%
GGATATTTCCACAAATACTT+TGG + tig0040401:5392-5411 Msa1459690:intron 30.0%
!! ATGAATTTTCGAGAACTTTC+TGG - tig0040401:5687-5706 None:intergenic 30.0%
GATAAAACAGCACATACTTT+CGG - tig0040401:5719-5738 None:intergenic 30.0%
!! GCTGTTTTATCTCAAACTAT+TGG + tig0040401:5728-5747 Msa1459690:CDS 30.0%
! GTTTTATCTCAAACTATTGG+AGG + tig0040401:5731-5750 Msa1459690:CDS 30.0%
TTATGCTTCATTTATTCTCG+TGG + tig0040401:5875-5894 Msa1459690:intron 30.0%
! TATGGATTTTCAGTTTATGC+AGG + tig0040401:6006-6025 Msa1459690:intron 30.0%
ATCAGATTTCGATATGAACA+AGG - tig0040401:6049-6068 None:intergenic 30.0%
AAATCCAAACATAATCTGGT+TGG + tig0040401:6228-6247 Msa1459690:intron 30.0%
AAAACCAACCAGATTATGTT+TGG - tig0040401:6235-6254 None:intergenic 30.0%
!!! TTTTGCCTCTAGAGTATATT+TGG + tig0040401:6251-6270 Msa1459690:intron 30.0%
AACTTCCAAATATACTCTAG+AGG - tig0040401:6259-6278 None:intergenic 30.0%
CAGCAAATAATTAATGAGGT+TGG - tig0040401:6358-6377 None:intergenic 30.0%
GAAGCAGCAAATAATTAATG+AGG - tig0040401:6362-6381 None:intergenic 30.0%
!! CCTTTGAAGGTTTTCTTTTT+GGG + tig0040401:6417-6436 Msa1459690:intron 30.0%
!! TTCTTTTTGGGCTAATTCTA+TGG + tig0040401:6429-6448 Msa1459690:intron 30.0%
! GAGTACAACACTATTTTACT+TGG - tig0040401:6458-6477 None:intergenic 30.0%
ATACTGAAATAAAAAGGGAG+GGG - tig0040401:6623-6642 None:intergenic 30.0%
ATACTGAAATAAAAAGGGAG+GGG - tig0040401:6623-6642 None:intergenic 30.0%
!! TTTGCTTTATTTATGGAGCA+AGG + tig0040401:7069-7088 Msa1459690:CDS 30.0%
TTATCTCCAACAATGCTATA+TGG - tig0040401:7320-7339 None:intergenic 30.0%
ATAGCATTGTTGGAGATAAA+TGG + tig0040401:7321-7340 Msa1459690:CDS 30.0%
GTTGGAGATAAATGGAAAAT+TGG + tig0040401:7329-7348 Msa1459690:CDS 30.0%
! TATCAAGTGGATTCTCAAAT+GGG + tig0040401:7496-7515 Msa1459690:CDS 30.0%
GAAAGCTTCTGATGAAAATT+TGG + tig0040401:7689-7708 Msa1459690:CDS 30.0%
!!! GAGCTTGCTATAATTTTTAC+CGG + tig0040401:7733-7752 Msa1459690:CDS 30.0%
!!! AGCTTGCTATAATTTTTACC+GGG + tig0040401:7734-7753 Msa1459690:CDS 30.0%
CTATTAGCAAAAAACCTAGA+TGG + tig0040401:7995-8014 Msa1459690:intron 30.0%
AAGCAAGTATCTAAAAGCTT+AGG - tig0040401:8064-8083 None:intergenic 30.0%
!! CCACATGAAAATTTAAGTTG+CGG + tig0040401:8185-8204 Msa1459690:intron 30.0%
!! CACATGAAAATTTAAGTTGC+GGG + tig0040401:8186-8205 Msa1459690:intron 30.0%
TGATTGAGTAAACATGATGA+AGG - tig0040401:8296-8315 None:intergenic 30.0%
!! ATGCATGATTCTGAAGTAAT+CGG + tig0040401:8315-8334 Msa1459690:intron 30.0%
AAAATTACCATGAAGAGTTG+GGG - tig0040401:8439-8458 None:intergenic 30.0%
GAAAATTACCATGAAGAGTT+GGG - tig0040401:8440-8459 None:intergenic 30.0%
!! CTACAATTCTTGTTTGTTGT+AGG + tig0040401:8525-8544 Msa1459690:intron 30.0%
TAGATTCTTCTGAATGTCAT+CGG - tig0040401:8622-8641 None:intergenic 30.0%
GACATTCAGAAGAATCTATT+TGG + tig0040401:8624-8643 Msa1459690:CDS 30.0%
TCAATGAAGAAAGATGTAAG+AGG + tig0040401:8869-8888 Msa1459690:three_prime_UTR 30.0%
!! TTTGAGAGATTTTGATGAAG+TGG + tig0040401:8954-8973 Msa1459690:three_prime_UTR 30.0%
AAAAAATATCTCAGCTCAAG+GGG - tig0040401:9077-9096 None:intergenic 30.0%
GAGAAATTACACATGCTTTA+TGG + tig0040401:9099-9118 Msa1459690:three_prime_UTR 30.0%
AATTACACATGCTTTATGGT+AGG + tig0040401:9103-9122 Msa1459690:three_prime_UTR 30.0%
ACTGACATGGAAAGAAAAAA+AGG - tig0040401:9184-9203 None:intergenic 30.0%
! AAGGCACTAGTCAATTGAAA+AGG - tig0040401:56-75 None:intergenic 35.0%
! ATCTGAAATATTCTCAGTGG+AGG - tig0040401:138-157 None:intergenic 35.0%
! TCTCGATTTTACTGGATAAG+TGG + tig0040401:197-216 Msa1459690:CDS 35.0%
! CTCGATTTTACTGGATAAGT+GGG + tig0040401:198-217 Msa1459690:CDS 35.0%
!!! GTCTATTTTTGAAGGCAACA+AGG + tig0040401:226-245 Msa1459690:CDS 35.0%
!!! CTTTGTCACTTTTGGCAAAA+AGG + tig0040401:276-295 Msa1459690:CDS 35.0%
GAAAAAATGGAACATTCTCC+AGG + tig0040401:299-318 Msa1459690:CDS 35.0%
TTTCACTGCACCTTCTAATT+TGG + tig0040401:730-749 Msa1459690:CDS 35.0%
GAGTCAACATCCAAATTAGA+AGG - tig0040401:743-762 None:intergenic 35.0%
! TGTATAGTTCATGGACTACA+TGG - tig0040401:960-979 None:intergenic 35.0%
GAATCATTTGAATTGTGCAC+AGG - tig0040401:1000-1019 None:intergenic 35.0%
!!! TGCTTATTGATTTTTTGGGC+CGG + tig0040401:1110-1129 Msa1459690:intron 35.0%
ACTTAAGTGATGCAGTATTG+TGG + tig0040401:1181-1200 Msa1459690:intron 35.0%
!! TCTTTCCAATTTTTAGAGGG+GGG + tig0040401:1214-1233 Msa1459690:intron 35.0%
AACTAACAAAGCATATCTGG+CGG - tig0040401:1325-1344 None:intergenic 35.0%
CACAACTAACAAAGCATATC+TGG - tig0040401:1328-1347 None:intergenic 35.0%
! TGCTTTGTTAGTTGTGTCTA+TGG + tig0040401:1332-1351 Msa1459690:intron 35.0%
AGTCACGAGTAATAAAACAG+AGG - tig0040401:1358-1377 None:intergenic 35.0%
GCTTCTCCATATATCAGAAA+TGG - tig0040401:1396-1415 None:intergenic 35.0%
GGGATGGAAATATAATTGAG+AGG - tig0040401:1489-1508 None:intergenic 35.0%
TAAAATGGTGAGGAAACAGA+CGG - tig0040401:1607-1626 None:intergenic 35.0%
CATTCTACAGTAAAATGGTG+AGG - tig0040401:1617-1636 None:intergenic 35.0%
CACAAATGCTTTCATGACAA+AGG - tig0040401:1641-1660 None:intergenic 35.0%
ACTTGTCTGTAACAAAACCT+CGG + tig0040401:1756-1775 Msa1459690:CDS 35.0%
ACAAGTAATCTCTGATCAAG+TGG + tig0040401:1780-1799 Msa1459690:CDS 35.0%
!! AACTTGAGTTTTGATAGGTG+TGG - tig0040401:1866-1885 None:intergenic 35.0%
GCAATTAAATCAACCTGAGT+TGG - tig0040401:1986-2005 None:intergenic 35.0%
! ATGACATGCTTGCTGAATAT+GGG + tig0040401:2014-2033 Msa1459690:CDS 35.0%
CAGTACTGTCAATGTAACTA+TGG + tig0040401:2186-2205 Msa1459690:CDS 35.0%
TGATACATTAGATATCCGGA+TGG + tig0040401:2222-2241 Msa1459690:CDS 35.0%
GTTTCCGAAGGAATATCTAA+AGG + tig0040401:2286-2305 Msa1459690:CDS 35.0%
TCTGAAAATCACTTGAGTTC+TGG + tig0040401:2355-2374 Msa1459690:CDS 35.0%
CTGAAAATCACTTGAGTTCT+GGG + tig0040401:2356-2375 Msa1459690:CDS 35.0%
ACTGACTGTCAGTTAGTTAA+GGG + tig0040401:2379-2398 Msa1459690:CDS 35.0%
CATCACTAGATCATCTTCAT+AGG - tig0040401:2545-2564 None:intergenic 35.0%
TGATGCACAAAAATTCAAGC+CGG + tig0040401:2560-2579 Msa1459690:CDS 35.0%
GTATGTTCTTCCTTATGCAA+AGG + tig0040401:2624-2643 Msa1459690:CDS 35.0%
ACAGAAGATTCCTTTGCATA+AGG - tig0040401:2637-2656 None:intergenic 35.0%
TGTTTCTTAGAAAACTGGAC+TGG + tig0040401:2753-2772 Msa1459690:intron 35.0%
!!! GTAGAGTTTTAAGAGCTATC+AGG + tig0040401:2785-2804 Msa1459690:CDS 35.0%
CACATAGATTAGGATCATCT+AGG - tig0040401:2867-2886 None:intergenic 35.0%
TGAAGATAAACTATCAGAGG+AGG + tig0040401:2885-2904 Msa1459690:CDS 35.0%
ATAACACAACACTGTTGAAG+AGG + tig0040401:2977-2996 Msa1459690:CDS 35.0%
TTACAGTAGACATCCAAGTA+TGG - tig0040401:3162-3181 None:intergenic 35.0%
CCAAAGCTAAACTCATTAGT+AGG - tig0040401:3613-3632 None:intergenic 35.0%
! CCTACTAATGAGTTTAGCTT+TGG + tig0040401:3610-3629 Msa1459690:CDS 35.0%
! TGTCCTCTTCTTGTTTACTT+AGG + tig0040401:3719-3738 Msa1459690:intron 35.0%
GAACCTAAGTAAACAAGAAG+AGG - tig0040401:3725-3744 None:intergenic 35.0%
CATTTGGATGGAATGTTTAG+GGG - tig0040401:3794-3813 None:intergenic 35.0%
AAGTGCAGATAACATTTGGA+TGG - tig0040401:3806-3825 None:intergenic 35.0%
! ATCCATAACATTTTGAGCCT+TGG - tig0040401:3910-3929 None:intergenic 35.0%
! TCTTGGGACTTTTTAGATGT+TGG + tig0040401:3973-3992 Msa1459690:intron 35.0%
!! CTTTTGACTCTTTTACACGT+AGG + tig0040401:4193-4212 Msa1459690:intron 35.0%
! AACGACTTTTGTTCGTTTAC+AGG + tig0040401:4483-4502 Msa1459690:intron 35.0%
! ACGACTTTTGTTCGTTTACA+GGG + tig0040401:4484-4503 Msa1459690:intron 35.0%
! TTGGTTGCATGCATTTTACT+TGG + tig0040401:4511-4530 Msa1459690:CDS 35.0%
! TGGTTGCATGCATTTTACTT+GGG + tig0040401:4512-4531 Msa1459690:CDS 35.0%
ATAGTAATGCGATCAGAAAG+AGG - tig0040401:4707-4726 None:intergenic 35.0%
CTGTATTCTTGATTGTTGTC+TGG + tig0040401:4835-4854 Msa1459690:intron 35.0%
ATGTATCAATGCCAATTCTG+TGG + tig0040401:4963-4982 Msa1459690:CDS 35.0%
!! ATGCTTTGTTTCCACAGAAT+TGG - tig0040401:4977-4996 None:intergenic 35.0%
GCATGAAGGGTTACTAAAAT+TGG + tig0040401:4993-5012 Msa1459690:CDS 35.0%
GGAACTCAAACATTTCCATA+AGG + tig0040401:5077-5096 Msa1459690:CDS 35.0%
! TTTCTGGTAAGTTAACCTCA+AGG - tig0040401:5671-5690 None:intergenic 35.0%
TTCATTTATTCTCGTGGAAC+TGG + tig0040401:5881-5900 Msa1459690:intron 35.0%
TTTCAGTTTATGCAGGCTTA+AGG + tig0040401:6013-6032 Msa1459690:intron 35.0%
GATTTCGATATGAACAAGGT+GGG - tig0040401:6045-6064 None:intergenic 35.0%
AGATTTCGATATGAACAAGG+TGG - tig0040401:6046-6065 None:intergenic 35.0%
TGGATTGCATAGTTTCATGA+AGG - tig0040401:6291-6310 None:intergenic 35.0%
TGTTTAAGAACTAGGAGGAA+CGG - tig0040401:6326-6345 None:intergenic 35.0%
!! GCCTTTGAAGGTTTTCTTTT+TGG + tig0040401:6416-6435 Msa1459690:intron 35.0%
CCCAAAAAGAAAACCTTCAA+AGG - tig0040401:6420-6439 None:intergenic 35.0%
AATAAAAAGGGAGGGGAAAA+GGG - tig0040401:6616-6635 None:intergenic 35.0%
AAATAAAAAGGGAGGGGAAA+AGG - tig0040401:6617-6636 None:intergenic 35.0%
AATAAAAAGGGAGGGGAAAA+GGG - tig0040401:6616-6635 None:intergenic 35.0%
AAATAAAAAGGGAGGGGAAA+AGG - tig0040401:6617-6636 None:intergenic 35.0%
! AATGTTTTACGCATCTATGG+GGG - tig0040401:6778-6797 None:intergenic 35.0%
! GAATGTTTTACGCATCTATG+GGG - tig0040401:6779-6798 None:intergenic 35.0%
! GGAATGTTTTACGCATCTAT+GGG - tig0040401:6780-6799 None:intergenic 35.0%
! TGGAATGTTTTACGCATCTA+TGG - tig0040401:6781-6800 None:intergenic 35.0%
ATTCCAATATTGTCTAACGC+CGG + tig0040401:6795-6814 Msa1459690:intron 35.0%
AAAGAGAGACAATACAGATC+AGG - tig0040401:6905-6924 None:intergenic 35.0%
!! ATATCAGAGAGTATCCTGTA+TGG + tig0040401:7141-7160 Msa1459690:CDS 35.0%
!! TATCAGAGAGTATCCTGTAT+GGG + tig0040401:7142-7161 Msa1459690:CDS 35.0%
AAAGTTTGTGGACTCAGAAT+TGG - tig0040401:7210-7229 None:intergenic 35.0%
AGAGAAGCTACAAAAGTTTG+TGG - tig0040401:7222-7241 None:intergenic 35.0%
! ACAAACTTTTGTAGCTTCTC+TGG + tig0040401:7221-7240 Msa1459690:intron 35.0%
GATCTGAATTAGGACAAAAC+TGG - tig0040401:7270-7289 None:intergenic 35.0%
TCAGATCCTCAAATAATTGC+AGG + tig0040401:7283-7302 Msa1459690:intron 35.0%
CAGATACCTGCAATTATTTG+AGG - tig0040401:7292-7311 None:intergenic 35.0%
CAGCTACTATTTGAGAGTTT+AGG - tig0040401:7402-7421 None:intergenic 35.0%
TTTGAGAATCCACTTGATAC+AGG - tig0040401:7495-7514 None:intergenic 35.0%
! GTATCAAGTGGATTCTCAAA+TGG + tig0040401:7495-7514 Msa1459690:CDS 35.0%
TTCCATCATCAGTCAAATCA+TGG - tig0040401:7530-7549 None:intergenic 35.0%
!! TGATTTGACTGATGATGGAA+TGG + tig0040401:7530-7549 Msa1459690:CDS 35.0%
GCAAATCAATACAGAGAAAC+TGG - tig0040401:7563-7582 None:intergenic 35.0%
GTCTCTGTTACTAATTGAGA+TGG - tig0040401:7807-7826 None:intergenic 35.0%
GCATTGTGAAGAAATTTCGA+AGG + tig0040401:7947-7966 Msa1459690:CDS 35.0%
ATCTGTAACAAAACCCATCT+AGG - tig0040401:8012-8031 None:intergenic 35.0%
! CCGCAACTTAAATTTTCATG+TGG - tig0040401:8188-8207 None:intergenic 35.0%
GCACCACAGAAACAAATATA+AGG - tig0040401:8356-8375 None:intergenic 35.0%
TGCAGTCAAAGATGAAAAGA+GGG + tig0040401:8373-8392 Msa1459690:intron 35.0%
GGAAAATTACCATGAAGAGT+TGG - tig0040401:8441-8460 None:intergenic 35.0%
AGTTGTACATTGATGCAACT+GGG - tig0040401:8655-8674 None:intergenic 35.0%
TAGTTGTACATTGATGCAAC+TGG - tig0040401:8656-8675 None:intergenic 35.0%
GGCTTAATTTCTTAGCCTAA+TGG - tig0040401:9000-9019 None:intergenic 35.0%
TTGACTAGTGCCTTGAATGA+AGG + tig0040401:62-81 Msa1459690:CDS 40.0%
! CATTCTGGTCTCGATTTTAC+TGG + tig0040401:189-208 Msa1459690:CDS 40.0%
!!! GGGAGACTGTCTATTTTTGA+AGG + tig0040401:218-237 Msa1459690:CDS 40.0%
! CTTTTACATCCTTGCAGTGT+GGG - tig0040401:337-356 None:intergenic 40.0%
! TCTTTTACATCCTTGCAGTG+TGG - tig0040401:338-357 None:intergenic 40.0%
TGATGGAAAAGTCTGTCAGT+AGG + tig0040401:411-430 Msa1459690:CDS 40.0%
AAAGTCTGTCAGTAGGATGA+TGG + tig0040401:418-437 Msa1459690:CDS 40.0%
ATTGAAGTAGACATCCTCTG+TGG - tig0040401:495-514 None:intergenic 40.0%
TTGAAGCATGTCAGAAGACA+AGG + tig0040401:591-610 Msa1459690:CDS 40.0%
AAGCAAACACCAGTAAAGCA+GGG - tig0040401:1095-1114 None:intergenic 40.0%
TAAGCAAACACCAGTAAAGC+AGG - tig0040401:1096-1115 None:intergenic 40.0%
GTGTTAATGCATTTGCAGGA+TGG + tig0040401:1658-1677 Msa1459690:intron 40.0%
ATTTGACAAAGGCTGCTTGT+TGG - tig0040401:1694-1713 None:intergenic 40.0%
GCAGAGATTGCATTTGACAA+AGG - tig0040401:1705-1724 None:intergenic 40.0%
CTGGAGTTTGCAGAAAACAA+TGG - tig0040401:1830-1849 None:intergenic 40.0%
! CATGACATGCTTGCTGAATA+TGG + tig0040401:2013-2032 Msa1459690:CDS 40.0%
! AATAAAGCATCTCTTGGCCT+TGG + tig0040401:2093-2112 Msa1459690:CDS 40.0%
!!! TACTGTTTTTGGACGCTTCT+TGG - tig0040401:2171-2190 None:intergenic 40.0%
CATTAGATATCCGGATGGAT+TGG + tig0040401:2227-2246 Msa1459690:CDS 40.0%
! GGAAACATCCTTTTTGACAG+AGG - tig0040401:2272-2291 None:intergenic 40.0%
GTCAAAAAGGATGTTTCCGA+AGG + tig0040401:2274-2293 Msa1459690:CDS 40.0%
GACTGACTGTCAGTTAGTTA+AGG + tig0040401:2378-2397 Msa1459690:CDS 40.0%
CATAGGATGAATCAGACCTT+AGG - tig0040401:2528-2547 None:intergenic 40.0%
GATGCACAAAAATTCAAGCC+GGG + tig0040401:2561-2580 Msa1459690:CDS 40.0%
ATGCACAAAAATTCAAGCCG+GGG + tig0040401:2562-2581 Msa1459690:CDS 40.0%
CAATTGGATTTCCTGTCAAG+AGG - tig0040401:2837-2856 None:intergenic 40.0%
ATAAACTATCAGAGGAGGCT+GGG + tig0040401:2890-2909 Msa1459690:CDS 40.0%
TAAGACCATGTTTCCTGATG+TGG + tig0040401:2939-2958 Msa1459690:CDS 40.0%
AAGACCATGTTTCCTGATGT+GGG + tig0040401:2940-2959 Msa1459690:CDS 40.0%
ATCTGTTGCACTCATTTCCT+CGG - tig0040401:3208-3227 None:intergenic 40.0%
AACAAATTCTTCCCCTTCCT+TGG - tig0040401:3253-3272 None:intergenic 40.0%
AACAAATCTACTTCCTGGCT+CGG - tig0040401:3491-3510 None:intergenic 40.0%
AGCAAGCACATTAACGTAGT+AGG + tig0040401:3524-3543 Msa1459690:CDS 40.0%
AGCACATTAACGTAGTAGGA+TGG + tig0040401:3528-3547 Msa1459690:CDS 40.0%
ACATTAACGTAGTAGGATGG+AGG + tig0040401:3531-3550 Msa1459690:CDS 40.0%
TCCTACTTTATCTGAGAGAG+TGG + tig0040401:3559-3578 Msa1459690:CDS 40.0%
TCCACTCTCTCAGATAAAGT+AGG - tig0040401:3563-3582 None:intergenic 40.0%
GTCCAAGGCTCAAAATGTTA+TGG + tig0040401:3905-3924 Msa1459690:intron 40.0%
GTCTTGAACATCACAGCATT+AGG - tig0040401:4107-4126 None:intergenic 40.0%
ACAACTCATGTATCTCACAC+TGG - tig0040401:4265-4284 None:intergenic 40.0%
GTGTGAGATACATGAGTTGT+TGG + tig0040401:4265-4284 Msa1459690:intron 40.0%
GATACATGAGTTGTTGGCAT+TGG + tig0040401:4271-4290 Msa1459690:CDS 40.0%
! GAGATCTGTTTTGCCCTTAA+AGG + tig0040401:4337-4356 Msa1459690:CDS 40.0%
TGTTCGTTTACAGGGAAGAT+TGG + tig0040401:4492-4511 Msa1459690:intron 40.0%
ACAGAATGCAGAGATTCTGA+AGG + tig0040401:4676-4695 Msa1459690:CDS 40.0%
!! ATTGTTGTCTGGTTCTCAAC+AGG + tig0040401:4846-4865 Msa1459690:intron 40.0%
! TACAGATTGATCAAAGGCGT+AGG - tig0040401:4881-4900 None:intergenic 40.0%
TCTGTGGAAACAAAGCATGA+AGG + tig0040401:4979-4998 Msa1459690:CDS 40.0%
CTGTGGAAACAAAGCATGAA+GGG + tig0040401:4980-4999 Msa1459690:CDS 40.0%
TGAGAGTGGTGATATAGAGA+GGG + tig0040401:5137-5156 Msa1459690:CDS 40.0%
ATCTGTGTTGTGCAAGAGTT+AGG + tig0040401:5552-5571 Msa1459690:intron 40.0%
AACGTGCATATGTTTCTCTC+CGG + tig0040401:5778-5797 Msa1459690:CDS 40.0%
AGTTTATGCAGGCTTAAGGT+AGG + tig0040401:6017-6036 Msa1459690:intron 40.0%
AAGGGAAAAGTTGCAGAAAC+AGG - tig0040401:6180-6199 None:intergenic 40.0%
CTGCTTAAGAAACACCTTTG+AGG - tig0040401:6397-6416 None:intergenic 40.0%
GTTTCTTAAGCAGCCTTTGA+AGG + tig0040401:6404-6423 Msa1459690:intron 40.0%
TTTGTTTCCACCATTGGATC+AGG - tig0040401:6528-6547 None:intergenic 40.0%
TCACTGTGTACTACAGAACT+AGG + tig0040401:6572-6591 Msa1459690:intron 40.0%
!! CTAGTTCTGTAGTACTATGG+GGG - tig0040401:6676-6695 None:intergenic 40.0%
!! CCTAGTTCTGTAGTACTATG+GGG - tig0040401:6677-6696 None:intergenic 40.0%
!! GCCTAGTTCTGTAGTACTAT+GGG - tig0040401:6678-6697 None:intergenic 40.0%
!! TGCCTAGTTCTGTAGTACTA+TGG - tig0040401:6679-6698 None:intergenic 40.0%
TTACCGGCGTTAGACAATAT+TGG - tig0040401:6801-6820 None:intergenic 40.0%
CATTGAAGATCTTGTACCAG+TGG + tig0040401:6945-6964 Msa1459690:CDS 40.0%
AAATACTTTCCGATAGCCAC+TGG - tig0040401:6964-6983 None:intergenic 40.0%
ACATTGTCAGAACTACTCAC+TGG - tig0040401:7036-7055 None:intergenic 40.0%
!! GAGTAGTTCTGACAATGTGT+TGG + tig0040401:7038-7057 Msa1459690:CDS 40.0%
TTATGGAGCAAGGAAGCTTA+TGG + tig0040401:7079-7098 Msa1459690:CDS 40.0%
GGATACTCTCTGATATACCA+GGG - tig0040401:7137-7156 None:intergenic 40.0%
AGGATACTCTCTGATATACC+AGG - tig0040401:7138-7157 None:intergenic 40.0%
GCATGACCATATAGCATTGT+TGG + tig0040401:7311-7330 Msa1459690:CDS 40.0%
CAAATCACTCCTGTATCAAG+TGG + tig0040401:7483-7502 Msa1459690:CDS 40.0%
TGGATTCTCAAATGGGATTC+AGG + tig0040401:7503-7522 Msa1459690:CDS 40.0%
GTCCATGATTTGACTGATGA+TGG + tig0040401:7525-7544 Msa1459690:CDS 40.0%
ATTTGCAGCCACGTGAAATA+TGG + tig0040401:7577-7596 Msa1459690:CDS 40.0%
GCTGTATTCCATATTTCACG+TGG - tig0040401:7588-7607 None:intergenic 40.0%
TACATAAAAGTTGAGGCCAG+AGG - tig0040401:7781-7800 None:intergenic 40.0%
GTGCAGTCAAAGATGAAAAG+AGG + tig0040401:8372-8391 Msa1459690:intron 40.0%
TCAAAGATGAAAAGAGGGAG+TGG + tig0040401:8378-8397 Msa1459690:CDS 40.0%
TGGGTAGAATCAACGTCATT+TGG - tig0040401:8567-8586 None:intergenic 40.0%
GTTGTACATTGATGCAACTG+GGG - tig0040401:8654-8673 None:intergenic 40.0%
ATAAGAAAATGGGGTGACCA+TGG + tig0040401:8795-8814 Msa1459690:three_prime_UTR 40.0%
CAACAGCATTATGACACACA+GGG - tig0040401:8918-8937 None:intergenic 40.0%
TAAGCCTAAGTTTGCATGCA+TGG + tig0040401:9014-9033 Msa1459690:three_prime_UTR 40.0%
CAATCCATGCATGCAAACTT+AGG - tig0040401:9021-9040 None:intergenic 40.0%
! GTTTGCATGCATGGATTGAT+TGG + tig0040401:9023-9042 Msa1459690:three_prime_UTR 40.0%
TGATTGGAATCTCACCAAAG+AGG + tig0040401:9039-9058 Msa1459690:three_prime_UTR 40.0%
GATTGGAATCTCACCAAAGA+GGG + tig0040401:9040-9059 Msa1459690:three_prime_UTR 40.0%
ATTGGAATCTCACCAAAGAG+GGG + tig0040401:9041-9060 Msa1459690:three_prime_UTR 40.0%
CACATCTTCAGCTAGATTGA+TGG + tig0040401:9156-9175 Msa1459690:three_prime_UTR 40.0%
CATGAGTAATGAGACTGACA+TGG - tig0040401:9197-9216 None:intergenic 40.0%
TTGACGGTTTCCAAGAGACT+AGG + tig0040401:96-115 Msa1459690:CDS 45.0%
TGACGGTTTCCAAGAGACTA+GGG + tig0040401:97-116 Msa1459690:CDS 45.0%
TTGATGTACCCCTAGTCTCT+TGG - tig0040401:109-128 None:intergenic 45.0%
AGATAACTTCCATCGAGCTC+AGG + tig0040401:552-571 Msa1459690:CDS 45.0%
GATAACTTCCATCGAGCTCA+GGG + tig0040401:553-572 Msa1459690:CDS 45.0%
ATGTCAGAAGACAAGGCCAA+TGG + tig0040401:598-617 Msa1459690:CDS 45.0%
! TAGCAAGCACTGTAGTCACT+TGG + tig0040401:775-794 Msa1459690:CDS 45.0%
TTCTAAGCTGTCTGATCCTG+AGG + tig0040401:903-922 Msa1459690:intron 45.0%
! ATATTAAGGAGGCATGCCGT+AGG - tig0040401:1039-1058 None:intergenic 45.0%
TACGGCATGCCTCCTTAATA+TGG + tig0040401:1038-1057 Msa1459690:intron 45.0%
AGCAAACACCAGTAAAGCAG+GGG - tig0040401:1094-1113 None:intergenic 45.0%
!! TCCAATTTTTAGAGGGGGGT+AGG + tig0040401:1218-1237 Msa1459690:intron 45.0%
! ACCTACCCCCCTCTAAAAAT+TGG - tig0040401:1222-1241 None:intergenic 45.0%
TATCTGGCAGCTTCTCTTGT+TGG - tig0040401:1291-1310 None:intergenic 45.0%
ATCAGAGATTACTTGTGCCG+AGG - tig0040401:1776-1795 None:intergenic 45.0%
TGCAAACTCCAGCATCTTAG+CGG + tig0040401:1838-1857 Msa1459690:CDS 45.0%
AATTCAGGAAAGAGTGGCAG+AGG - tig0040401:1962-1981 None:intergenic 45.0%
GTTGGGAATTCAGGAAAGAG+TGG - tig0040401:1968-1987 None:intergenic 45.0%
CTTTCCTGAATTCCCAACTC+AGG + tig0040401:1970-1989 Msa1459690:intron 45.0%
! TCAACCTGAGTTGGGAATTC+AGG - tig0040401:1977-1996 None:intergenic 45.0%
! GAATATGGGCTTTGCTGTGT+CGG + tig0040401:2028-2047 Msa1459690:CDS 45.0%
CAATTCTGGTCCAATCCATC+CGG - tig0040401:2240-2259 None:intergenic 45.0%
AACATCAGCACACTGTTCCT+TGG - tig0040401:2599-2618 None:intergenic 45.0%
GATAAACTATCAGAGGAGGC+TGG + tig0040401:2889-2908 Msa1459690:CDS 45.0%
! TTTCAGGTCTGAGCCATACT+TGG + tig0040401:3146-3165 Msa1459690:intron 45.0%
AGTGCAACAGATAAATGGCC+TGG + tig0040401:3216-3235 Msa1459690:CDS 45.0%
! GATTTGTGCTGACCAAGGAA+GGG + tig0040401:3238-3257 Msa1459690:CDS 45.0%
! ATTTGTGCTGACCAAGGAAG+GGG + tig0040401:3239-3258 Msa1459690:CDS 45.0%
GAGTGAAGATATGCAGTGCA+TGG - tig0040401:3662-3681 None:intergenic 45.0%
CCTTGGACATTACAGCATGA+AGG - tig0040401:3893-3912 None:intergenic 45.0%
CCTTCATGCTGTAATGTCCA+AGG + tig0040401:3890-3909 Msa1459690:intron 45.0%
! GATGTTGGTTGTCTTTGTCC+AGG + tig0040401:3988-4007 Msa1459690:intron 45.0%
GCATTAGGACATTGTTAGCC+AGG - tig0040401:4092-4111 None:intergenic 45.0%
GTCCATGCTGCATCCTTTAA+GGG - tig0040401:4353-4372 None:intergenic 45.0%
CTTAAAGGATGCAGCATGGA+CGG + tig0040401:4352-4371 Msa1459690:CDS 45.0%
GAGGACATACTTAAGTGCGA+AGG - tig0040401:4414-4433 None:intergenic 45.0%
CAGCTGTTGATCCTGTCTAT+AGG + tig0040401:4612-4631 Msa1459690:CDS 45.0%
GAAGCTGTCACAAGTATCCT+TGG + tig0040401:4904-4923 Msa1459690:CDS 45.0%
CACAAGTTTCAAGCGCAGAA+AGG - tig0040401:5050-5069 None:intergenic 45.0%
!! CCAGCATGTATCTAGCCTTA+TGG - tig0040401:5095-5114 None:intergenic 45.0%
CCATAAGGCTAGATACATGC+TGG + tig0040401:5092-5111 Msa1459690:CDS 45.0%
!! CTAGATACATGCTGGCTCAA+GGG + tig0040401:5100-5119 Msa1459690:CDS 45.0%
TGGCTCAAGGGTTGTATAGA+AGG + tig0040401:5112-5131 Msa1459690:CDS 45.0%
GGCTCAAGGGTTGTATAGAA+GGG + tig0040401:5113-5132 Msa1459690:CDS 45.0%
GCTCAAGGGTTGTATAGAAG+GGG + tig0040401:5114-5133 Msa1459690:CDS 45.0%
TTGTATAGAAGGGGTGAGAG+TGG + tig0040401:5123-5142 Msa1459690:CDS 45.0%
GTGAGAGTGGTGATATAGAG+AGG + tig0040401:5136-5155 Msa1459690:CDS 45.0%
TTCTTATTCCCAGCAGAACC+CGG - tig0040401:5645-5664 None:intergenic 45.0%
GGTTCTGCTGGGAATAAGAA+AGG + tig0040401:5645-5664 Msa1459690:CDS 45.0%
TGGGAATAAGAAAGGCCTTG+AGG + tig0040401:5653-5672 Msa1459690:CDS 45.0%
CTCAAACTATTGGAGGAGAC+AGG + tig0040401:5738-5757 Msa1459690:CDS 45.0%
ACGTGCATATGTTTCTCTCC+GGG + tig0040401:5779-5798 Msa1459690:CDS 45.0%
ACAGGCGAGGATATGATCAT+CGG - tig0040401:6162-6181 None:intergenic 45.0%
AAAAGTTGCAGAAACAGGCG+AGG - tig0040401:6175-6194 None:intergenic 45.0%
AGGAACGGTATCTGTTGGAT+TGG - tig0040401:6311-6330 None:intergenic 45.0%
! TATTTGCTGCTTCTTCCCCT+AGG + tig0040401:6369-6388 Msa1459690:intron 45.0%
!! AAACACCTTTGAGGTGCCTA+GGG - tig0040401:6388-6407 None:intergenic 45.0%
! TGCACAAGTTTTTCCGCCAT+TGG + tig0040401:6478-6497 Msa1459690:intron 45.0%
GAGACTTATGGATCCAATGG+CGG - tig0040401:6494-6513 None:intergenic 45.0%
GACGAGACTTATGGATCCAA+TGG - tig0040401:6497-6516 None:intergenic 45.0%
GCGAGATATGACGAGACTTA+TGG - tig0040401:6506-6525 None:intergenic 45.0%
TCATATCTCGCCTGATCCAA+TGG + tig0040401:6515-6534 Msa1459690:intron 45.0%
! CACGAGTTTGTTTCCACCAT+TGG - tig0040401:6534-6553 None:intergenic 45.0%
GGGGAAAAGGGACAAATAGA+AGG - tig0040401:6604-6623 None:intergenic 45.0%
CCCCATAGTACTACAGAACT+AGG + tig0040401:6674-6693 Msa1459690:intron 45.0%
GGGGAAAAGGGACAAATAGA+AGG - tig0040401:6604-6623 None:intergenic 45.0%
GATCTTGTACCAGTGGCTAT+CGG + tig0040401:6952-6971 Msa1459690:CDS 45.0%
CAGAAGCAGTAGTCTGAGAA+TGG - tig0040401:7011-7030 None:intergenic 45.0%
TCAGGCAAGCTGCATATTTC+TGG - tig0040401:7105-7124 None:intergenic 45.0%
ATGCAGCTTGCCTGAAATTG+AGG + tig0040401:7110-7129 Msa1459690:CDS 45.0%
TGCAGCTTGCCTGAAATTGA+GGG + tig0040401:7111-7130 Msa1459690:CDS 45.0%
GTTTCAACTCCGGACATAGT+TGG - tig0040401:7840-7859 None:intergenic 45.0%
CAGATCAAGGGTTTCAACTC+CGG - tig0040401:7850-7869 None:intergenic 45.0%
! ACTTCTAGGGGCTGTTAGTA+TGG + tig0040401:8153-8172 Msa1459690:intron 45.0%
GTTGTAGGTAGCAGTAGAAG+TGG + tig0040401:8540-8559 Msa1459690:intron 45.0%
TCTACCCATGTCACAACAGT+AGG + tig0040401:8579-8598 Msa1459690:CDS 45.0%
CTACCCATGTCACAACAGTA+GGG + tig0040401:8580-8599 Msa1459690:CDS 45.0%
ACTCCCTACTGTTGTGACAT+GGG - tig0040401:8586-8605 None:intergenic 45.0%
GTACAACTAACGATGCTGAG+AGG + tig0040401:8667-8686 Msa1459690:CDS 45.0%
GCAACAGCATTATGACACAC+AGG - tig0040401:8919-8938 None:intergenic 45.0%
AATCTCACCAAAGAGGGGAT+CGG + tig0040401:9046-9065 Msa1459690:three_prime_UTR 45.0%
GACGGTTTCCAAGAGACTAG+GGG + tig0040401:98-117 Msa1459690:CDS 50.0%
TTACATCCTTGCAGTGTGGG+CGG - tig0040401:334-353 None:intergenic 50.0%
AAACACCAGTAAAGCAGGGG+GGG - tig0040401:1091-1110 None:intergenic 50.0%
CAAACACCAGTAAAGCAGGG+GGG - tig0040401:1092-1111 None:intergenic 50.0%
GCAAACACCAGTAAAGCAGG+GGG - tig0040401:1093-1112 None:intergenic 50.0%
GGCGGCAATCAAAGCATATC+TGG - tig0040401:1307-1326 None:intergenic 50.0%
CCTTGGTCTGATAATCTCCC+CGG - tig0040401:2582-2601 None:intergenic 50.0%
ACACTTTCTTCAGCCACCAG+AGG + tig0040401:2810-2829 Msa1459690:CDS 50.0%
TTTCCTGTCAAGAGGTCCTC+TGG - tig0040401:2829-2848 None:intergenic 50.0%
ACCATGTTTCCTGATGTGGG+AGG + tig0040401:2943-2962 Msa1459690:CDS 50.0%
ACCTCCCACATCAGGAAACA+TGG - tig0040401:2947-2966 None:intergenic 50.0%
TTTCCTGATGTGGGAGGTCT+TGG + tig0040401:2949-2968 Msa1459690:CDS 50.0%
!! TCATTTCTTGGCTCTGTCCG+AGG + tig0040401:3188-3207 Msa1459690:CDS 50.0%
TCCTTGGTCAGCACAAATCC+AGG - tig0040401:3237-3256 None:intergenic 50.0%
! GGATTTGTGCTGACCAAGGA+AGG + tig0040401:3237-3256 Msa1459690:CDS 50.0%
!! ATCCTCTGCGCTTTGAAAGC+TGG + tig0040401:3313-3332 Msa1459690:CDS 50.0%
TTTGAAAGCTGGCAGCGACT+TGG + tig0040401:3324-3343 Msa1459690:CDS 50.0%
GAGTGGAAACAAGCCGAAGA+AGG + tig0040401:3576-3595 Msa1459690:CDS 50.0%
CAAGCCGAAGAAGGAGTAGA+CGG + tig0040401:3585-3604 Msa1459690:CDS 50.0%
TGCCCTTAAAGGATGCAGCA+TGG + tig0040401:4348-4367 Msa1459690:CDS 50.0%
CGTCCATGCTGCATCCTTTA+AGG - tig0040401:4354-4373 None:intergenic 50.0%
GAGGCATGCATCCTATAGAC+AGG - tig0040401:4626-4645 None:intergenic 50.0%
ATGAGCTATCTGTGCTGCCA+AGG - tig0040401:4924-4943 None:intergenic 50.0%
TGCGCTTGAAACTTGTGTCG+AGG + tig0040401:5053-5072 Msa1459690:CDS 50.0%
GCGCTTGAAACTTGTGTCGA+GGG + tig0040401:5054-5073 Msa1459690:CDS 50.0%
CGCTTGAAACTTGTGTCGAG+GGG + tig0040401:5055-5074 Msa1459690:CDS 50.0%
GCTTGAAACTTGTGTCGAGG+GGG + tig0040401:5056-5075 Msa1459690:CDS 50.0%
!! GCTAGATACATGCTGGCTCA+AGG + tig0040401:5099-5118 Msa1459690:CDS 50.0%
TGATATCAGGCGCAAGACAC+CGG + tig0040401:5623-5642 Msa1459690:intron 50.0%
CGTGCATATGTTTCTCTCCG+GGG + tig0040401:5780-5799 Msa1459690:CDS 50.0%
TTTCTCTCCGGGGAGATAAG+CGG + tig0040401:5790-5809 Msa1459690:CDS 50.0%
GATTTACCCGCTTATCTCCC+CGG - tig0040401:5800-5819 None:intergenic 50.0%
CTAGGAGGAACGGTATCTGT+TGG - tig0040401:6316-6335 None:intergenic 50.0%
!! AACACCTTTGAGGTGCCTAG+GGG - tig0040401:6387-6406 None:intergenic 50.0%
!! GAAACACCTTTGAGGTGCCT+AGG - tig0040401:6389-6408 None:intergenic 50.0%
TATCTCGCCTGATCCAATGG+TGG + tig0040401:6518-6537 Msa1459690:intron 50.0%
GGTGGAAACAAACTCGTGCA+TGG + tig0040401:6536-6555 Msa1459690:intron 50.0%
TACTATGGGGGTGAGGAAAG+GGG - tig0040401:6664-6683 None:intergenic 50.0%
GTACTATGGGGGTGAGGAAA+GGG - tig0040401:6665-6684 None:intergenic 50.0%
AGTACTATGGGGGTGAGGAA+AGG - tig0040401:6666-6685 None:intergenic 50.0%
TCTGTAGTACTATGGGGGTG+AGG - tig0040401:6671-6690 None:intergenic 50.0%
ATCTATGGGGGTGAGGAAAG+GGG - tig0040401:6766-6785 None:intergenic 50.0%
CATCTATGGGGGTGAGGAAA+GGG - tig0040401:6767-6786 None:intergenic 50.0%
TTTACGCATCTATGGGGGTG+AGG - tig0040401:6773-6792 None:intergenic 50.0%
AGTAGTCTGAGAATGGCGCA+TGG - tig0040401:7004-7023 None:intergenic 50.0%
ATACCAGGGCCCTCAATTTC+AGG - tig0040401:7123-7142 None:intergenic 50.0%
TTACCGGGAGAGTTCTTCTG+TGG + tig0040401:7749-7768 Msa1459690:CDS 50.0%
TCTTCTGTGGTGCTTACCTC+TGG + tig0040401:7762-7781 Msa1459690:CDS 50.0%
CCGGACATAGTTGGATCGAA+CGG - tig0040401:7831-7850 None:intergenic 50.0%
CCGTTCGATCCAACTATGTC+CGG + tig0040401:7828-7847 Msa1459690:CDS 50.0%
CCTTGGGATGCTCAGATCAA+GGG - tig0040401:7862-7881 None:intergenic 50.0%
TCCTTGGGATGCTCAGATCA+AGG - tig0040401:7863-7882 None:intergenic 50.0%
TCCCAAGGAAGCTTCTCTTG+TGG + tig0040401:7874-7893 Msa1459690:CDS 50.0%
CCCACAAGAGAAGCTTCCTT+GGG - tig0040401:7878-7897 None:intergenic 50.0%
CCCAAGGAAGCTTCTCTTGT+GGG + tig0040401:7875-7894 Msa1459690:CDS 50.0%
ACGTCCATGCACTAGCACAT+AGG - tig0040401:7901-7920 None:intergenic 50.0%
GCTTACAAACTCGCCTGCTA+CGG + tig0040401:8413-8432 Msa1459690:CDS 50.0%
CACTCCCTACTGTTGTGACA+TGG - tig0040401:8587-8606 None:intergenic 50.0%
CATGTCACAACAGTAGGGAG+TGG + tig0040401:8585-8604 Msa1459690:CDS 50.0%
GAAAATGGGGTGACCATGGT+AGG + tig0040401:8799-8818 Msa1459690:three_prime_UTR 50.0%
TGCACGGATTCAACCTACCA+TGG - tig0040401:8815-8834 None:intergenic 50.0%
TACATCCTTGCAGTGTGGGC+GGG - tig0040401:333-352 None:intergenic 55.0%
TCCACTTCTGCTCTCCACAG+AGG + tig0040401:478-497 Msa1459690:CDS 55.0%
TCCTCTGTGGAGAGCAGAAG+TGG - tig0040401:482-501 None:intergenic 55.0%
! ATCTAGAGCCCTGAGCTCGA+TGG - tig0040401:564-583 None:intergenic 55.0%
CTGTAGTCACTTGGCTGCTG+AGG + tig0040401:784-803 Msa1459690:CDS 55.0%
CTTGGCTGCTGAGGAAGTGA+AGG + tig0040401:793-812 Msa1459690:CDS 55.0%
GTAAACCCCCCCTGCTTTAC+TGG + tig0040401:1083-1102 Msa1459690:intron 55.0%
! GGCTGCTTGTTGGAACTGTG+AGG - tig0040401:1684-1703 None:intergenic 55.0%
GTGTGGTTCCGCTAAGATGC+TGG - tig0040401:1849-1868 None:intergenic 55.0%
! CTTTGCTGTGTCGGTGAAGG+TGG + tig0040401:2037-2056 Msa1459690:CDS 55.0%
! TGTGTCGGTGAAGGTGGCAA+AGG + tig0040401:2043-2062 Msa1459690:CDS 55.0%
GAAGGTGGCAAAGGTGGAGA+AGG + tig0040401:2052-2071 Msa1459690:CDS 55.0%
CCGGGGAGATTATCAGACCA+AGG + tig0040401:2579-2598 Msa1459690:CDS 55.0%
TGTCCAAGACCTCCCACATC+AGG - tig0040401:2955-2974 None:intergenic 55.0%
! GCCTGGATTTGTGCTGACCA+AGG + tig0040401:3233-3252 Msa1459690:CDS 55.0%
TGCCAGCTTTCAAAGCGCAG+AGG - tig0040401:3318-3337 None:intergenic 55.0%
TTTCTTGGTTGCACCGAGCC+AGG + tig0040401:3475-3494 Msa1459690:intron 55.0%
GGCACCGTCTACTCCTTCTT+CGG - tig0040401:3592-3611 None:intergenic 55.0%
GGCAAAGACATCTGCTCAGC+AGG + tig0040401:3631-3650 Msa1459690:CDS 55.0%
GATATCAGGCGCAAGACACC+GGG + tig0040401:5624-5643 Msa1459690:intron 55.0%
TTCTCTCCGGGGAGATAAGC+GGG + tig0040401:5791-5810 Msa1459690:CDS 55.0%
TCTTCCCCTAGGCACCTCAA+AGG + tig0040401:6380-6399 Msa1459690:intron 55.0%
GCATCTATGGGGGTGAGGAA+AGG - tig0040401:6768-6787 None:intergenic 55.0%
TTGCCTGAAATTGAGGGCCC+TGG + tig0040401:7117-7136 Msa1459690:CDS 55.0%
GCACCACAGAAGAACTCTCC+CGG - tig0040401:7755-7774 None:intergenic 55.0%
CCCTTGATCTGAGCATCCCA+AGG + tig0040401:7859-7878 Msa1459690:CDS 55.0%
GCCCACAAGAGAAGCTTCCT+TGG - tig0040401:7879-7898 None:intergenic 55.0%
TGGGCCTATGTGCTAGTGCA+TGG + tig0040401:7894-7913 Msa1459690:CDS 55.0%
! GGTGTTACCGATCCCCTCTT+TGG - tig0040401:9056-9075 None:intergenic 55.0%
ACATCCTTGCAGTGTGGGCG+GGG - tig0040401:332-351 None:intergenic 60.0%
! GGGCTTTGCTGTGTCGGTGA+AGG + tig0040401:2034-2053 Msa1459690:CDS 60.0%
GTCGGTGAAGGTGGCAAAGG+TGG + tig0040401:2046-2065 Msa1459690:CDS 60.0%
CCTGTCAAGAGGTCCTCTGG+TGG - tig0040401:2826-2845 None:intergenic 60.0%
CCACCAGAGGACCTCTTGAC+AGG + tig0040401:2823-2842 Msa1459690:CDS 60.0%
TCAGAGGAGGCTGGGTCTGA+AGG + tig0040401:2898-2917 Msa1459690:CDS 60.0%
GCAAGACACCGGGTTCTGCT+GGG + tig0040401:5634-5653 Msa1459690:CDS 60.0%
GCAGGCGAGTTTGTAAGCGC+AGG - tig0040401:8411-8430 None:intergenic 60.0%
TGAAGAGTTGGGGCCGTAGC+AGG - tig0040401:8429-8448 None:intergenic 60.0%
GCTACGGCCCCAACTCTTCA+TGG + tig0040401:8429-8448 Msa1459690:CDS 60.0%
CATCCTTGCAGTGTGGGCGG+GGG - tig0040401:331-350 None:intergenic 65.0%
CGCAAGACACCGGGTTCTGC+TGG + tig0040401:5633-5652 Msa1459690:CDS 65.0%
GGGGGTGAGGAAAGGGGTTG+TGG - tig0040401:6658-6677 None:intergenic 65.0%
TGTGGGCGGGGGACTGAACC+TGG - tig0040401:320-339 None:intergenic 70.0%
AGTCCCCCGCCCACACTGCA+AGG + tig0040401:325-344 Msa1459690:CDS 70.0%
GGGGGTGAGGAAAGGGGTCG+TGG - tig0040401:6760-6779 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0040401 gene 2 9240 2 ID=Msa1459690;Name=Msa1459690
tig0040401 mRNA 2 9240 2 ID=Msa1459690-mRNA-1;Parent=Msa1459690;Name=Msa1459690-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.92|0.78|1|1|1|14|512|1468
tig0040401 exon 2 871 2 ID=Msa1459690-mRNA-1:exon:22369;Parent=Msa1459690-mRNA-1
tig0040401 exon 1676 1882 1676 ID=Msa1459690-mRNA-1:exon:22370;Parent=Msa1459690-mRNA-1
tig0040401 exon 1992 2654 1992 ID=Msa1459690-mRNA-1:exon:22371;Parent=Msa1459690-mRNA-1
tig0040401 exon 2763 2998 2763 ID=Msa1459690-mRNA-1:exon:22372;Parent=Msa1459690-mRNA-1
tig0040401 exon 3152 3362 3152 ID=Msa1459690-mRNA-1:exon:22373;Parent=Msa1459690-mRNA-1
tig0040401 exon 3497 3652 3497 ID=Msa1459690-mRNA-1:exon:22374;Parent=Msa1459690-mRNA-1
tig0040401 exon 4266 4423 4266 ID=Msa1459690-mRNA-1:exon:22375;Parent=Msa1459690-mRNA-1
tig0040401 exon 4505 4697 4505 ID=Msa1459690-mRNA-1:exon:22376;Parent=Msa1459690-mRNA-1
tig0040401 exon 4868 5250 4868 ID=Msa1459690-mRNA-1:exon:22377;Parent=Msa1459690-mRNA-1
tig0040401 exon 5632 5812 5632 ID=Msa1459690-mRNA-1:exon:22378;Parent=Msa1459690-mRNA-1
tig0040401 exon 6934 7163 6934 ID=Msa1459690-mRNA-1:exon:22379;Parent=Msa1459690-mRNA-1
tig0040401 exon 7305 7968 7305 ID=Msa1459690-mRNA-1:exon:22380;Parent=Msa1459690-mRNA-1
tig0040401 exon 8378 8450 8378 ID=Msa1459690-mRNA-1:exon:22381;Parent=Msa1459690-mRNA-1
tig0040401 exon 8547 9240 8547 ID=Msa1459690-mRNA-1:exon:22382;Parent=Msa1459690-mRNA-1
tig0040401 CDS 2 871 2 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 CDS 1676 1882 1676 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 CDS 1992 2654 1992 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 CDS 2763 2998 2763 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 CDS 3152 3362 3152 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 CDS 3497 3652 3497 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 CDS 4266 4423 4266 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 CDS 4505 4697 4505 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 CDS 4868 5250 4868 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 CDS 5632 5812 5632 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 CDS 6934 7163 6934 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 CDS 7305 7968 7305 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 CDS 8378 8450 8378 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 CDS 8547 8728 8547 ID=Msa1459690-mRNA-1:cds;Parent=Msa1459690-mRNA-1
tig0040401 three_prime_UTR 8729 9240 8729 ID=Msa1459690-mRNA-1:three_prime_utr;Parent=Msa1459690-mRNA-1
Gene Sequence

>Msa1459690

GAGGCATCTTATCATCTTTGCAAGATTGTAGAGTCTGTAGCTCTTGATTATCCTTTTCAATTGACTAGTGCCTTGAATGAAGGTTGCAATTTAATTGACGGTTTCCAAGAGACTAGGGGTACATCAATACGTACCTCCACTGAGAATATTTCAGATTTGGACAACTCACTTTTGATGAAAAACAGTTCATTCTGGTCTCGATTTTACTGGATAAGTGGGAGACTGTCTATTTTTGAAGGCAACAAGGCAAAAGCTTGTGAAGAATTTTGTATTGCTTTGTCACTTTTGGCAAAAAGGGAAAAAATGGAACATTCTCCAGGTTCAGTCCCCCGCCCACACTGCAAGGATGTAAAAGAGATAAACATCGATAGAGTTCTTTATGAAGTTAATATATTGAAAGTCAATTTTTTGATGGAAAAGTCTGTCAGTAGGATGATGGAACAAGAAAAGTATTTGGACTGTGTATCTCTACTTTCTCCACTTCTGCTCTCCACAGAGGATGTCTACTTCAATTCATTTTCTTTATGCATGGCAGATAAAAAAGATGAAAAGATAACTTCCATCGAGCTCAGGGCTCTAGATGTTCTAATTGAAGCATGTCAGAAGACAAGGCCAATGGATGTAGATATGTATTTCAATTGTCATTACAGAAAACTGAAAATACTTATGGCATTGATGGGTTTGAATACAAGTATTACATCATGTAAATCTTCTGATCAAACACTCGGTTTCACTGCACCTTCTAATTTGGATGTTGACTCAAATGAAAGCTCTAGCAAGCACTGTAGTCACTTGGCTGCTGAGGAAGTGAAGGCACTCTCTGACTGTATATCACAAGTGAAGAAAGTTATTGATCATTTTGGAGATTCCGATGGCCTCACAGTTCCAACAAGCAGCCTTTGTCAAATGCAATCTCTGCTACTGTTAATCATGAGCTATGTCGCGAATGTACTTGTCTGTAACAAAACCTCGGCACAAGTAATCTCTGATCAAGTGGAAAGTAGCTGTTTTGTTGATGCAGCCATTGTTTTCTGCAAACTCCAGCATCTTAGCGGAACCACACCTATCAAAACTCAAGTTGATTTAATTGCTGCAACACATGACATGCTTGCTGAATATGGGCTTTGCTGTGTCGGTGAAGGTGGCAAAGGTGGAGAAGGAACATTTCTTAGATTTGCAATAAAGCATCTCTTGGCCTTGGATATGAAGTTTAAATCCATCTTTAACCTTAAAAATAAAGAATCAATGCGATGCCAAGAAGCGTCCAAAAACAGTACTGTCAATGTAACTATGGAAGATTCAAAATCTGATACATTAGATATCCGGATGGATTGGACCAGAATTGATGAAATTACCTCTGTCAAAAAGGATGTTTCCGAAGGAATATCTAAAGGCATTTCATGTTGCAAAGTTCAGAATAAAGACAGTAAGGAAGAAGAGTCTGAAAATCACTTGAGTTCTGGGACTGACTGTCAGTTAGTTAAGGGTGAAAATTCATGCAATCAATTGATTGAATGTGTAAATGAACTTTCAGAAGATGAAAGGGAAGAACTTGAGTCTATCATTGACAGTGCATTAGATCAGTGCTTTTTCTGTTTATATGGATTAAACCTAAGGTCTGATTCATCCTATGAAGATGATCTAGTGATGCACAAAAATTCAAGCCGGGGAGATTATCAGACCAAGGAACAGTGTGCTGATGTTTTCAAGTATGTTCTTCCTTATGCAAAGGAATCTTCTAAAACTGGACTGGTCAAGCTCCGTAGAGTTTTAAGAGCTATCAGGAAACACTTTCTTCAGCCACCAGAGGACCTCTTGACAGGAAATCCAATTGATAATTTCCTAGATGATCCTAATCTATGTGAAGATAAACTATCAGAGGAGGCTGGGTCTGAAGGATTTCTTGAAACTATAACTAAGACCATGTTTCCTGATGTGGGAGGTCTTGGACAGTATAACACAACACTGTTGAAGAGGTCTGAGCCATACTTGGATGTCTACTGTAACTTGTATCATTTCTTGGCTCTGTCCGAGGAAATGAGTGCAACAGATAAATGGCCTGGATTTGTGCTGACCAAGGAAGGGGAAGAATTTGTTGAGCAAAATGCTAAGCTCTTCAAATATGATCTCATGTACAATCCTCTGCGCTTTGAAAGCTGGCAGCGACTTGGAAATATTTATGATGAGGAAGTAGATTTGTTACTTAACGATGGTAGCAAGCACATTAACGTAGTAGGATGGAGGAAGAATCCTACTTTATCTGAGAGAGTGGAAACAAGCCGAAGAAGGAGTAGACGGTGCCTACTAATGAGTTTAGCTTTGGCAAAGACATCTGCTCAGCAGTGTGAGATACATGAGTTGTTGGCATTGGTATACTACGACAGTCTTCAAAATGTAGTCCCATTTTATGATCAGAGATCTGTTTTGCCCTTAAAGGATGCAGCATGGACGGCGTTCTGTGAGAGCTCAATGAAACATTTTAAGAAAGCCTTCGCACTTAAGGAAGATTGGTTGCATGCATTTTACTTGGGTAAACTTAGCGAAAAGCTTGAATATTCGCATGAAATTGCCTTATCATATTACAATAAAGCTATTGCTTTGAATACATCAGCTGTTGATCCTGTCTATAGGATGCATGCCTCACGCTTGAAACTATTATTTAAGCGCGGAAAACAGAATGCAGAGATTCTGAAGGTTATTTCAGCCTACGCCTTTGATCAATCTGTAAAAGAAGCTGTCACAAGTATCCTTGGCAGCACAGATAGCTCATCTTTAAATACAAAGGAGACATGTATCAATGCCAATTCTGTGGAAACAAAGCATGAAGGGTTACTAAAATTGGATACTGCATGGTCTATACTTTACAATGATTGCCTTTCTGCGCTTGAAACTTGTGTCGAGGGGGAACTCAAACATTTCCATAAGGCTAGATACATGCTGGCTCAAGGGTTGTATAGAAGGGGTGAGAGTGGTGATATAGAGAGGGCAACAGATCAACTATCTTTCTGTTTCAAATCTTCACGCTCATCATTTACCATAAACATGTGGGAAATTGATAGCATGACAAAAAAAGGAAGGCGCAAGACACCGGGTTCTGCTGGGAATAAGAAAGGCCTTGAGGTTAACTTACCAGAAAGTTCTCGAAAATTCATTACTTGCATCCGAAAGTATGTGCTGTTTTATCTCAAACTATTGGAGGAGACAGGAGATAGATGTATTCTTGAACGTGCATATGTTTCTCTCCGGGGAGATAAGCGGTTTTCATTATGCATTGAAGATCTTGTACCAGTGGCTATCGGAAAGTATTTAAAAGCTATGATTACAACCATGCGCCATTCTCAGACTACTGCTTCTGTTCCAGTGAGTAGTTCTGACAATGTGTTGGAGAGAATGTTTGCTTTATTTATGGAGCAAGGAAGCTTATGGCCAGAAATATGCAGCTTGCCTGAAATTGAGGGCCCTGGTATATCAGAGAGTATCCTGTATGGGTATCTGCATGACCATATAGCATTGTTGGAGATAAATGGAAAATTGGAAACTCTTGAAACAATTAATGAGAAGATTCGAAAACGTTTTAAGAATCCTAAACTCTCAAATAGTAGCTGTGCAAAAGTTTGTAAGCATGCTTCTGTTGCTTTGTGTCGATCTCTTATATACAATTTGGCACAAATCACTCCTGTATCAAGTGGATTCTCAAATGGGATTCAGGTCCATGATTTGACTGATGATGGAATGGAATATAGCCAGTTTCTCTGTATTGATTTGCAGCCACGTGAAATATGGAATACAGCTTTTGAAGATTCATCTCTTTTAGAAAATATCAAAACAAAATGGAGTGCCATTTTATCAAAAATAAAGGATATGCTGATAAAGAAAGCTTCTGATGAAAATTTGGAAATAGCAAACACTTTGCTTAGAGCTTGCTATAATTTTTACCGGGAGAGTTCTTCTGTGGTGCTTACCTCTGGCCTCAACTTTTATGTAATTCCATCTCAATTAGTAACAGAGACACCGTTCGATCCAACTATGTCCGGAGTTGAAACCCTTGATCTGAGCATCCCAAGGAAGCTTCTCTTGTGGGCCTATGTGCTAGTGCATGGACGTTATACAAATATATCAATTGTTGTGAAGCATTGTGAAGAAATTTCGAAGTCAAAGATGAAAAGAGGGAGTGGAATGTCACCTGCGCTTACAAACTCGCCTGCTACGGCCCCAACTCTTCATGGTAGCAGTAGAAGTGGACCAAATGACGTTGATTCTACCCATGTCACAACAGTAGGGAGTGGTTTACTTTGCACCGATGACATTCAGAAGAATCTATTTGGTTCTCCCCAGTTGCATCAATGTACAACTAACGATGCTGAGAGGAGCAATGTGAACGCACGTGAAGTAGAGACACGAGATTGA
Protein sequence

>Msa1459690

EASYHLCKIVESVALDYPFQLTSALNEGCNLIDGFQETRGTSIRTSTENISDLDNSLLMKNSSFWSRFYWISGRLSIFEGNKAKACEEFCIALSLLAKREKMEHSPGSVPRPHCKDVKEINIDRVLYEVNILKVNFLMEKSVSRMMEQEKYLDCVSLLSPLLLSTEDVYFNSFSLCMADKKDEKITSIELRALDVLIEACQKTRPMDVDMYFNCHYRKLKILMALMGLNTSITSCKSSDQTLGFTAPSNLDVDSNESSSKHCSHLAAEEVKALSDCISQVKKVIDHFGDSDGLTVPTSSLCQMQSLLLLIMSYVANVLVCNKTSAQVISDQVESSCFVDAAIVFCKLQHLSGTTPIKTQVDLIAATHDMLAEYGLCCVGEGGKGGEGTFLRFAIKHLLALDMKFKSIFNLKNKESMRCQEASKNSTVNVTMEDSKSDTLDIRMDWTRIDEITSVKKDVSEGISKGISCCKVQNKDSKEEESENHLSSGTDCQLVKGENSCNQLIECVNELSEDEREELESIIDSALDQCFFCLYGLNLRSDSSYEDDLVMHKNSSRGDYQTKEQCADVFKYVLPYAKESSKTGLVKLRRVLRAIRKHFLQPPEDLLTGNPIDNFLDDPNLCEDKLSEEAGSEGFLETITKTMFPDVGGLGQYNTTLLKRSEPYLDVYCNLYHFLALSEEMSATDKWPGFVLTKEGEEFVEQNAKLFKYDLMYNPLRFESWQRLGNIYDEEVDLLLNDGSKHINVVGWRKNPTLSERVETSRRRSRRCLLMSLALAKTSAQQCEIHELLALVYYDSLQNVVPFYDQRSVLPLKDAAWTAFCESSMKHFKKAFALKEDWLHAFYLGKLSEKLEYSHEIALSYYNKAIALNTSAVDPVYRMHASRLKLLFKRGKQNAEILKVISAYAFDQSVKEAVTSILGSTDSSSLNTKETCINANSVETKHEGLLKLDTAWSILYNDCLSALETCVEGELKHFHKARYMLAQGLYRRGESGDIERATDQLSFCFKSSRSSFTINMWEIDSMTKKGRRKTPGSAGNKKGLEVNLPESSRKFITCIRKYVLFYLKLLEETGDRCILERAYVSLRGDKRFSLCIEDLVPVAIGKYLKAMITTMRHSQTTASVPVSSSDNVLERMFALFMEQGSLWPEICSLPEIEGPGISESILYGYLHDHIALLEINGKLETLETINEKIRKRFKNPKLSNSSCAKVCKHASVALCRSLIYNLAQITPVSSGFSNGIQVHDLTDDGMEYSQFLCIDLQPREIWNTAFEDSSLLENIKTKWSAILSKIKDMLIKKASDENLEIANTLLRACYNFYRESSSVVLTSGLNFYVIPSQLVTETPFDPTMSGVETLDLSIPRKLLLWAYVLVHGRYTNISIVVKHCEEISKSKMKRGSGMSPALTNSPATAPTLHGSSRSGPNDVDSTHVTTVGSGLLCTDDIQKNLFGSPQLHQCTTNDAERSNVNAREVETRD*