AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1399550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1399550 MtrunA17_Chr1g0212891 96.117 927 6 1 1 897 288 1214 0.0 1828
Msa1399550 MtrunA17_Chr4g0064451 88.556 935 69 4 1 897 226 1160 0.0 1698
Msa1399550 MtrunA17_Chr4g0064641 83.833 934 82 4 1 897 199 1100 0.0 1590
Msa1399550 MtrunA17_Chr6g0453861 87.919 298 19 2 228 525 1 281 5.11e-178 515
Msa1399550 MtrunA17_Chr6g0453881 97.419 155 4 0 739 893 22 176 9.02e-103 316
Msa1399550 MtrunA17_Chr6g0453871 94.040 151 9 0 540 690 27 177 2.15e-94 295
Msa1399550 MtrunA17_Chr8g0381071 24.096 913 574 24 7 892 265 1085 1.28e-57 215
Msa1399550 MtrunA17_Chr7g0268421 21.545 492 291 15 102 511 447 925 6.54e-22 102
Msa1399550 MtrunA17_Chr2g0291081 20.627 829 520 26 106 894 309 1039 4.10e-20 96.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1399550 AT3G55220.1 84.142 927 117 2 1 897 288 1214 0.0 1641
Msa1399550 AT3G55200.1 84.142 927 117 2 1 897 288 1214 0.0 1641
Msa1399550 AT3G55200.3 84.142 927 117 2 1 897 288 1214 0.0 1641
Msa1399550 AT3G55200.2 84.142 927 117 2 1 897 288 1214 0.0 1641
Msa1399550 AT4G21100.1 24.642 909 573 22 7 892 265 1084 3.60e-56 211
Msa1399550 AT4G05420.2 24.229 908 578 22 7 892 244 1063 7.25e-56 210
Msa1399550 AT4G05420.1 24.229 908 578 22 7 892 265 1084 1.16e-55 209
Msa1399550 AT3G11960.4 24.954 541 302 21 64 511 401 930 1.12e-23 108
Msa1399550 AT3G11960.1 24.584 541 304 20 64 511 401 930 1.31e-23 108
Msa1399550 AT3G11960.3 24.584 541 304 20 64 511 401 930 1.31e-23 108
Msa1399550 AT3G11960.2 24.259 540 307 19 64 511 343 872 1.62e-23 108

Find 271 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAATTTCTTCCACCTTAT+TGG 0.107277 tig0022368:+99315 None:intergenic
CACCAATCAGGCTGCCTATT+TGG 0.116798 tig0022368:-98161 Msa1399550:three_prime_UTR
TCTTGCTCTTAGTCAGTTTC+AGG 0.121560 tig0022368:-100080 Msa1399550:CDS
CCATGGTCTGTATCAGTTTA+AGG 0.147073 tig0022368:-101866 Msa1399550:CDS
GCTGCTCAAGCTGGGGAAAA+TGG 0.168763 tig0022368:-100470 Msa1399550:CDS
CATGCTTTCTTCACTTTGTT+AGG 0.202085 tig0022368:+98337 None:intergenic
GATACTCGATCCCGATTCTT+AGG 0.218899 tig0022368:-100872 Msa1399550:CDS
CTGACCTTCATATCAGTAAT+TGG 0.227439 tig0022368:+101709 None:intergenic
ACAGGTTGTATTTCCTGTTT+TGG 0.235680 tig0022368:+100318 None:intergenic
TCCAGCAGTTAAACTCCTTT+TGG 0.249420 tig0022368:+100180 None:intergenic
ACGCTTTCCTCTTACAATAA+TGG 0.255451 tig0022368:+100826 None:intergenic
CGCTTTCCTCTTACAATAAT+GGG 0.256574 tig0022368:+100827 None:intergenic
AGGAAATACAACCTGTCTTT+TGG 0.256892 tig0022368:-100311 Msa1399550:CDS
TCCCTTTCGGTTTCTTTGAT+AGG 0.272046 tig0022368:-101412 Msa1399550:CDS
TGTTCTCAGGCTATATGATT+TGG 0.274280 tig0022368:-100032 Msa1399550:CDS
CATATGAAAGGGGTGTTAAA+AGG 0.275163 tig0022368:+100747 None:intergenic
CAAACGGTATTAGGCATATC+AGG 0.275629 tig0022368:-101363 Msa1399550:CDS
ACAATTTCTTCCACCTTATT+GGG 0.286302 tig0022368:+99316 None:intergenic
TTTGCAATTGTCCTCTTTCC+AGG 0.290931 tig0022368:+101310 None:intergenic
CTAGTAACTTAGTACTTCTT+TGG 0.294381 tig0022368:-98196 Msa1399550:three_prime_UTR
GCGCTAGTCAAATGTTGATA+TGG 0.294873 tig0022368:-98491 Msa1399550:intron
ACCAATCAGGCTGCCTATTT+GGG 0.299150 tig0022368:-98160 Msa1399550:three_prime_UTR
GGAAGATTACTTGCAGGATT+AGG 0.309171 tig0022368:-100058 Msa1399550:CDS
TAGATTAGGTATACCTTAAC+AGG 0.323064 tig0022368:+99067 None:intergenic
AAGTTCATCCAAACGGTATT+AGG 0.325887 tig0022368:-101372 Msa1399550:CDS
TCAAGGAAAAGAAGCGATTC+TGG 0.327003 tig0022368:+101019 None:intergenic
CTTTGTCTGCCTTCAGGCAC+TGG 0.331981 tig0022368:+101148 None:intergenic
GTCTGGTGATGTTGCTTGTT+TGG 0.334942 tig0022368:-101179 Msa1399550:CDS
GTATACCTTAACAGGAAAAT+AGG 0.337995 tig0022368:+99075 None:intergenic
CTGGATTTATTCATATATAT+AGG 0.342989 tig0022368:-100162 Msa1399550:CDS
GTCTAGAACCGTGGTGGATA+TGG 0.343885 tig0022368:-100912 Msa1399550:CDS
CGGGATCTTTGTCTGCCTTC+AGG 0.344846 tig0022368:+101142 None:intergenic
CACCACCAAAAGTTTCCGTT+TGG 0.349636 tig0022368:+100559 None:intergenic
CGAGTACGGTGATATCTTTA+AGG 0.353137 tig0022368:-102016 Msa1399550:CDS
TCAATGTGTGTGCTCAAGTC+GGG 0.354836 tig0022368:-101919 Msa1399550:CDS
ATGGCAGGTGCGGACAAGTT+TGG 0.360544 tig0022368:-99442 Msa1399550:CDS
TTGTTTGCGGCGTCTGAGTT+TGG 0.365945 tig0022368:-101892 Msa1399550:CDS
TGTATCAGTTTAAGGGAATA+GGG 0.366882 tig0022368:-101858 Msa1399550:CDS
CCGGTATACCTAGTGCTGTT+TGG 0.366905 tig0022368:-101567 Msa1399550:CDS
GTTCTCAGGCTATATGATTT+GGG 0.367050 tig0022368:-100031 Msa1399550:CDS
CAATAATGGGAAACAGCTTC+GGG 0.367514 tig0022368:+100840 None:intergenic
AAGACAAATAAATCCCAAAT+AGG 0.368963 tig0022368:+98147 None:intergenic
CTGTTTCCCATTATTGTAAG+AGG 0.371337 tig0022368:-100833 Msa1399550:CDS
CTGTATCAGTTTAAGGGAAT+AGG 0.375822 tig0022368:-101859 Msa1399550:CDS
GCATCTGTTGGCGGTGAGGA+TGG 0.386597 tig0022368:-100989 Msa1399550:CDS
ACAATAATGGGAAACAGCTT+CGG 0.388090 tig0022368:+100839 None:intergenic
GAGGATCTTGAGAACAGGTT+TGG 0.390845 tig0022368:-101620 Msa1399550:CDS
GGACACTACTCCCTCCCTTT+CGG 0.391896 tig0022368:-101425 Msa1399550:CDS
TTTCAGGGAAGATTACTTGC+AGG 0.393367 tig0022368:-100064 Msa1399550:CDS
GCAACCCAAACGGAAACTTT+TGG 0.398492 tig0022368:-100564 Msa1399550:CDS
TTCAAGGGTTTCATATGAAA+GGG 0.399706 tig0022368:+100736 None:intergenic
ATGCTTTCTTCACTTTGTTA+GGG 0.400330 tig0022368:+98338 None:intergenic
CAGGATTAGGACCTGTTCTC+AGG 0.402109 tig0022368:-100045 Msa1399550:CDS
CATGGTCTGTATCAGTTTAA+GGG 0.404009 tig0022368:-101865 Msa1399550:CDS
CAACAGATGCTTGAACTTCA+AGG 0.404934 tig0022368:+101002 None:intergenic
AGTTGGGTCGAATAGACTTC+AGG 0.406260 tig0022368:-101287 Msa1399550:CDS
GCTGAATGGAGCTCCCAATA+AGG 0.407221 tig0022368:-99329 Msa1399550:CDS
CAAAAGCTGAATCAGATAAG+TGG 0.407316 tig0022368:-100366 Msa1399550:intron
CCCGTCTATACTTGCAGTAA+TGG 0.412306 tig0022368:+99545 None:intergenic
CTGCTCAAGCTGGGGAAAAT+GGG 0.413867 tig0022368:-100469 Msa1399550:CDS
TGGGAGGATCAAGTGGGAGC+AGG 0.415443 tig0022368:-99356 Msa1399550:CDS
TGAATAGAGACAATTGTGTT+GGG 0.418831 tig0022368:+99968 None:intergenic
GCAAACCAGCGTTCAGGAAA+AGG 0.418899 tig0022368:+100948 None:intergenic
AGAATTCTTGATCCCAAAAC+AGG 0.420804 tig0022368:-100331 Msa1399550:CDS
AAGAGGACAATTGCAAAAGT+TGG 0.422719 tig0022368:-101304 Msa1399550:CDS
TGCAGATCCATTGGTAATGT+TGG 0.427201 tig0022368:+98772 None:intergenic
GATGAATTGGACAGGACCCC+TGG 0.427518 tig0022368:-98736 Msa1399550:CDS
AGTTTCTTCAGTATTTCTCC+AGG 0.428293 tig0022368:+98718 None:intergenic
ACACACATTGAAGAAGTAAC+AGG 0.429037 tig0022368:+101931 None:intergenic
TGTCCCTCAGTTCACCAATC+AGG 0.439637 tig0022368:-98173 Msa1399550:three_prime_UTR
CTGATATGCCTAATACCGTT+TGG 0.441610 tig0022368:+101364 None:intergenic
GTGGACCTCGATCTTCTTTG+AGG 0.444046 tig0022368:-101639 Msa1399550:CDS
CTCATTTGGAGATGCATATG+AGG 0.446107 tig0022368:-99147 Msa1399550:CDS
TCTTTGAGGATCTTGAGAAC+AGG 0.446199 tig0022368:-101625 Msa1399550:CDS
CATCTGTTGGCGGTGAGGAT+GGG 0.447167 tig0022368:-100988 Msa1399550:CDS
AAACCTTGTTAGGATTGATC+AGG 0.447236 tig0022368:-101746 Msa1399550:CDS
GGGGTCTCAATCCTAAGAAT+CGG 0.447794 tig0022368:+100861 None:intergenic
ACCACCAAAAGTTTCCGTTT+GGG 0.453593 tig0022368:+100560 None:intergenic
GAAGGTGTAGTTGCTGTTGC+TGG 0.455667 tig0022368:-100680 Msa1399550:CDS
ACTGTTAGTTTCATGCTTTG+TGG 0.455690 tig0022368:-98052 None:intergenic
TTTGTGTAGGATGTTATTGA+TGG 0.456962 tig0022368:-98814 Msa1399550:intron
CAGGTTGTTATTGCTCTAAA+CGG 0.457990 tig0022368:-101268 Msa1399550:CDS
AACCCTCTTCAGTTTCCATC+AGG 0.458606 tig0022368:+101803 None:intergenic
ATGGCAGTTTCCAAGCTTCC+CGG 0.458775 tig0022368:-101586 Msa1399550:CDS
ATTCAAGGGTTTCATATGAA+AGG 0.459170 tig0022368:+100735 None:intergenic
ATGAGCCAACAGCAAGAAAA+CGG 0.459614 tig0022368:+101122 None:intergenic
ATCTGTTGGCGGTGAGGATG+GGG 0.460428 tig0022368:-100987 Msa1399550:CDS
TCTGCCTGTCAAGTCGCCCT+TGG 0.460463 tig0022368:-100796 Msa1399550:CDS
TTCAATGTGTGTGCTCAAGT+CGG 0.460557 tig0022368:-101920 Msa1399550:CDS
GATGCCAATTACTGATATGA+AGG 0.461235 tig0022368:-101713 Msa1399550:CDS
TTCCTTCTGCAGACCGAGTA+CGG 0.463354 tig0022368:-102030 Msa1399550:CDS
TCCCAAATAGGCAGCCTGAT+TGG 0.463657 tig0022368:+98159 None:intergenic
CAAGCCAAGGGCGACTTGAC+AGG 0.464307 tig0022368:+100792 None:intergenic
TTGAATAGAGACAATTGTGT+TGG 0.464403 tig0022368:+99967 None:intergenic
GCGTTCAGGAAAAGGCTAGC+AGG 0.465299 tig0022368:+100956 None:intergenic
TATGATGCGGTAAGCCATCT+TGG 0.466751 tig0022368:+99484 None:intergenic
GCAGATCCATTGGTAATGTT+GGG 0.469512 tig0022368:+98773 None:intergenic
TTAGCCGTTGGCACAGCAAA+GGG 0.471255 tig0022368:-100217 Msa1399550:CDS
CTTGAAGTTCAAGCATCTGT+TGG 0.471375 tig0022368:-101001 Msa1399550:CDS
GGAACAGTTATGGGAAGTAT+TGG 0.471836 tig0022368:-99214 Msa1399550:CDS
GGAAAGCACAAGGGTGGCAT+TGG 0.472592 tig0022368:+101489 None:intergenic
CATTCTGCAAACCAGCGTTC+AGG 0.472769 tig0022368:+100942 None:intergenic
CTGAACGCTGGTTTGCAGAA+TGG 0.476157 tig0022368:-100941 Msa1399550:CDS
GCCACCCTTGTGCTTTCCAT+TGG 0.476366 tig0022368:-101484 Msa1399550:CDS
CAGGATCCAGTGATAAGATT+CGG 0.476586 tig0022368:+101086 None:intergenic
CTTAAAGATATCACCGTACT+CGG 0.477254 tig0022368:+102017 None:intergenic
CTTGCTCTTAGTCAGTTTCA+GGG 0.477422 tig0022368:-100079 Msa1399550:CDS
CTTCACTTTGTTAGGGAGCA+AGG 0.477697 tig0022368:+98345 None:intergenic
GGAGGATCAAGTGGGAGCAG+GGG 0.480502 tig0022368:-99354 Msa1399550:CDS
ATTAATGAGTGGAGAACTCC+TGG 0.480530 tig0022368:-101328 Msa1399550:CDS
CTGTCAAGTCGCCCTTGGCT+TGG 0.480711 tig0022368:-100791 Msa1399550:CDS
CCAAACAGCACTAGGTATAC+CGG 0.481385 tig0022368:+101567 None:intergenic
GGTTGCAGCACAAATTTCCT+AGG 0.481964 tig0022368:+100581 None:intergenic
GGATGTAACTGGTCAATTGA+TGG 0.484938 tig0022368:-101221 Msa1399550:CDS
GGGAGGATCAAGTGGGAGCA+GGG 0.490579 tig0022368:-99355 Msa1399550:CDS
AGAGTCTGCATACAATCATC+AGG 0.492699 tig0022368:+101067 None:intergenic
CATGGGGTTTCTCATTCATA+CGG 0.493766 tig0022368:-98318 Msa1399550:three_prime_UTR
TTTGGAGCTTCAGGATAATG+AGG 0.498161 tig0022368:-100293 Msa1399550:CDS
TGGGAGCAGGGGAAGCTGAA+TGG 0.498168 tig0022368:-99343 Msa1399550:CDS
AAAATGAGGCAGCAAATTCA+AGG 0.500144 tig0022368:+100720 None:intergenic
AAACTTGTCCGCACCTGCCA+TGG 0.500572 tig0022368:+99444 None:intergenic
CAACCTGATCAATCCTAACA+AGG 0.500777 tig0022368:+101743 None:intergenic
TCCATTACTGCAAGTATAGA+CGG 0.500792 tig0022368:-99546 Msa1399550:CDS
GGGATCAAGAATTCTGATGC+AGG 0.502138 tig0022368:+100339 None:intergenic
TGAGCCAACAGCAAGAAAAC+GGG 0.503097 tig0022368:+101123 None:intergenic
CAAGTCGGGGTTCTTGTTTG+CGG 0.503296 tig0022368:-101905 Msa1399550:CDS
AAATCATATAGCCTGAGAAC+AGG 0.504962 tig0022368:+100034 None:intergenic
TTTGTGTGGAAGAGATCATA+TGG 0.505435 tig0022368:-99110 Msa1399550:CDS
GGGTCTCAATCCTAAGAATC+GGG 0.509484 tig0022368:+100862 None:intergenic
GACTGCAATTTACGCCCAAA+AGG 0.509891 tig0022368:-100195 Msa1399550:CDS
GCCTCTCTTATACCAGGTGG+TGG 0.511589 tig0022368:-99253 Msa1399550:CDS
CATCAGCAAATATGTAGAGT+TGG 0.516125 tig0022368:+99515 None:intergenic
CGTTGGAACATGAGGGTGAT+CGG 0.516194 tig0022368:-101990 Msa1399550:CDS
GTTTCTTCAGTATTTCTCCA+GGG 0.524708 tig0022368:+98719 None:intergenic
GAGTTCTCCACTCATTAATA+CGG 0.525159 tig0022368:+101332 None:intergenic
AGAGGACAATTGCAAAAGTT+GGG 0.526698 tig0022368:-101303 Msa1399550:CDS
CTTCACAAAACTCAGGTTGA+AGG 0.527835 tig0022368:-100109 Msa1399550:CDS
TTTGGAGATGCATATGAGGC+AGG 0.529151 tig0022368:-99143 Msa1399550:CDS
TGTGATCTCATGCCTGCAAA+AGG 0.529541 tig0022368:-99275 Msa1399550:CDS
ACTAGGTATACCGGGAAGCT+TGG 0.532377 tig0022368:+101576 None:intergenic
CTCATGCAAGTTCATCCAAA+CGG 0.533265 tig0022368:-101379 Msa1399550:CDS
ATCCTGAAGCTCCAAAAGAC+AGG 0.533653 tig0022368:+100300 None:intergenic
TTAAGAAATGATCATTAGAG+AGG 0.534715 tig0022368:-98671 Msa1399550:intron
CCCAAAAGGAGTTTAACTGC+TGG 0.535933 tig0022368:-100181 Msa1399550:CDS
CCATTACTGCAAGTATAGAC+GGG 0.536221 tig0022368:-99545 Msa1399550:CDS
TGCTGCTATGCATAAACTGA+AGG 0.538015 tig0022368:-102064 None:intergenic
GAAGTTCAAGCATCTGTTGG+CGG 0.538634 tig0022368:-100998 Msa1399550:CDS
TGTTACTTGAGTAAGCCGTT+TGG 0.539518 tig0022368:-98368 Msa1399550:three_prime_UTR
GTGTTAAAAGGAAGTGTCCT+TGG 0.539650 tig0022368:+100759 None:intergenic
CTGATGATTGCGTTCCAAGA+TGG 0.539804 tig0022368:-99498 Msa1399550:CDS
TATCCACCACGGTTCTAGAC+AGG 0.542736 tig0022368:+100915 None:intergenic
TAAGGCTACGTTGGAACATG+AGG 0.542754 tig0022368:-101998 Msa1399550:CDS
ATATATAGGTTTCTAGAGGA+TGG 0.542765 tig0022368:-100148 Msa1399550:CDS
TTTAGCCGTTGGCACAGCAA+AGG 0.542918 tig0022368:-100218 Msa1399550:CDS
CAAAAGGCCTCTCTTATACC+AGG 0.543076 tig0022368:-99259 Msa1399550:CDS
GACAATCCGAATCTTATCAC+TGG 0.544039 tig0022368:-101092 Msa1399550:CDS
GTGGAGAAGCATGAAATGTC+TGG 0.546011 tig0022368:-101196 Msa1399550:CDS
TGTTAGGGAGCAAGGCCAAA+CGG 0.546455 tig0022368:+98353 None:intergenic
TTTCTTCAGTATTTCTCCAG+GGG 0.548741 tig0022368:+98720 None:intergenic
GACATTGCTCCAGTGCCTGA+AGG 0.549279 tig0022368:-101157 Msa1399550:CDS
TTCCATCAGGCTCGCAGACG+AGG 0.554048 tig0022368:+101816 None:intergenic
GAAATTGTACAATTTCATGT+TGG 0.555672 tig0022368:-99301 Msa1399550:CDS
TTTGTGCAGGTGTTGGCGAA+AGG 0.556137 tig0022368:-98396 Msa1399550:intron
GGCCTCGTCTGCGAGCCTGA+TGG 0.558067 tig0022368:-101818 Msa1399550:CDS
ACCGTGGTGGATATGGTCAC+AGG 0.558712 tig0022368:-100905 Msa1399550:CDS
GAGATAGAAGAGGATCCTAC+TGG 0.558794 tig0022368:-99379 Msa1399550:CDS
TTGTTATTGCTCTAAACGGA+GGG 0.559271 tig0022368:-101264 Msa1399550:CDS
AGTGGAGAACTCCTGGAAAG+AGG 0.561736 tig0022368:-101321 Msa1399550:CDS
GTGGTGATTGAGAGTGATCA+AGG 0.562419 tig0022368:-100542 Msa1399550:CDS
GAATAGAGACAATTGTGTTG+GGG 0.562664 tig0022368:+99969 None:intergenic
TACCGTGATCGAATTTATGT+TGG 0.567908 tig0022368:-99941 Msa1399550:CDS
CAGTCCCTTTGCTGTGCCAA+CGG 0.568057 tig0022368:+100213 None:intergenic
ACCTATCAAAGAAACCGAAA+GGG 0.568715 tig0022368:+101411 None:intergenic
CAGAAGAGCGTGAAGCTGCA+AGG 0.569941 tig0022368:-100508 Msa1399550:CDS
CACCTATCAAAGAAACCGAA+AGG 0.569957 tig0022368:+101410 None:intergenic
TGAAACTGACTAAGAGCAAG+AGG 0.570088 tig0022368:+100082 None:intergenic
TTCCTAGGCGTGTATCTAAG+TGG 0.571777 tig0022368:+100596 None:intergenic
AATTTGTGCTGCAACCCAAA+CGG 0.572113 tig0022368:-100574 Msa1399550:CDS
CACCGTACTCGGTCTGCAGA+AGG 0.573412 tig0022368:+102028 None:intergenic
AAATTGCTGATGAATTGGAC+AGG 0.573426 tig0022368:-98744 Msa1399550:CDS
AACTGGTCAATTGATGGAGG+TGG 0.575888 tig0022368:-101215 Msa1399550:CDS
CTAACAAAGTGAAGAAAGCA+TGG 0.576307 tig0022368:-98336 Msa1399550:three_prime_UTR
GATGATTGTATGCAGACTCT+AGG 0.576719 tig0022368:-101064 Msa1399550:CDS
CGTTCAGGAAAAGGCTAGCA+GGG 0.576888 tig0022368:+100957 None:intergenic
CAGCCTGATTGGTGAACTGA+GGG 0.578746 tig0022368:+98170 None:intergenic
AGGTTTGGCTGTCAGTGAGA+TGG 0.579043 tig0022368:-101605 Msa1399550:CDS
TGAACTACTTCACAAAACTC+AGG 0.579866 tig0022368:-100116 Msa1399550:CDS
AGAAATACTGAAGAAACTTG+AGG 0.583807 tig0022368:-98713 Msa1399550:CDS
TTCTTCGACTGTCTCACCAA+TGG 0.584841 tig0022368:+101468 None:intergenic
ATGGGGTTTCTCATTCATAC+GGG 0.586235 tig0022368:-98317 Msa1399550:three_prime_UTR
TGATATCTTTAAGGCTACGT+TGG 0.586642 tig0022368:-102007 Msa1399550:CDS
AAAAGCTGAATCAGATAAGT+GGG 0.587805 tig0022368:-100365 Msa1399550:intron
TTCACAGTCCAAACAGCACT+AGG 0.590414 tig0022368:+101559 None:intergenic
CTATGCATAAACTGAAGGGT+GGG 0.590795 tig0022368:-102059 Msa1399550:CDS
GAGCCTGATGGAAACTGAAG+AGG 0.592145 tig0022368:-101806 Msa1399550:CDS
ATTAGGCATATCAGGGAGGA+TGG 0.594759 tig0022368:-101355 Msa1399550:CDS
TTGTGTAGGATGTTATTGAT+GGG 0.596283 tig0022368:-98813 Msa1399550:intron
TGGTGAATGTAACCAAGCCA+AGG 0.597932 tig0022368:+100779 None:intergenic
AACATAAATTCGATCACGGT+AGG 0.599144 tig0022368:+99943 None:intergenic
TGTAGTTGCTGTTGCTGGTG+AGG 0.599449 tig0022368:-100675 Msa1399550:CDS
GGTTTCTCATTCATACGGGA+AGG 0.600563 tig0022368:-98313 Msa1399550:three_prime_UTR
TCATATATATAGGTTTCTAG+AGG 0.601291 tig0022368:-100152 Msa1399550:CDS
GTCGAAGAAGTCAGTGACAG+TGG 0.603224 tig0022368:-101454 Msa1399550:CDS
CTACTGGTGGGAGGATCAAG+TGG 0.603845 tig0022368:-99363 Msa1399550:CDS
AAGGCTACGTTGGAACATGA+GGG 0.604063 tig0022368:-101997 Msa1399550:CDS
TCATCTGACCAATGTGTGGA+AGG 0.604252 tig0022368:-100698 Msa1399550:CDS
TAACAAAGTGAAGAAAGCAT+GGG 0.604497 tig0022368:-98335 Msa1399550:three_prime_UTR
CCTTAAACTGATACAGACCA+TGG 0.608246 tig0022368:+101866 None:intergenic
CAAACAGCACTAGGTATACC+GGG 0.608706 tig0022368:+101568 None:intergenic
TTCTCATTCATACGGGAAGG+CGG 0.611144 tig0022368:-98310 Msa1399550:three_prime_UTR
CAATGTGTGTGCTCAAGTCG+GGG 0.611721 tig0022368:-101918 Msa1399550:CDS
TCAAGGGTTTCATATGAAAG+GGG 0.612132 tig0022368:+100737 None:intergenic
TTATGTTGGTGACATTCAAG+AGG 0.615248 tig0022368:-99927 Msa1399550:intron
GCAATTCCCAACATTACCAA+TGG 0.615421 tig0022368:-98779 Msa1399550:CDS
AAAATGCACTCTCCACCACC+TGG 0.615658 tig0022368:+99241 None:intergenic
GCGTCTGAGTTTGGAAACCA+TGG 0.616506 tig0022368:-101883 Msa1399550:CDS
ACATTGGTCAGATGAAAATG+AGG 0.617656 tig0022368:+100706 None:intergenic
GGTCAGCAATCTGTTTGAAG+AGG 0.618125 tig0022368:-101692 Msa1399550:CDS
CAGGATAATCCACCTTTGTG+TGG 0.618306 tig0022368:-99124 Msa1399550:CDS
AATAGGGGATGATGATGATG+TGG 0.618832 tig0022368:-101842 Msa1399550:CDS
CAACTACACCTTCCACACAT+TGG 0.622894 tig0022368:+100690 None:intergenic
GTATCAGTTTAAGGGAATAG+GGG 0.623605 tig0022368:-101857 Msa1399550:CDS
TATCAAAGAAACCGAAAGGG+AGG 0.624663 tig0022368:+101414 None:intergenic
TGTGTAGGATGTTATTGATG+GGG 0.626687 tig0022368:-98812 Msa1399550:intron
TGATCTCTTCCACACAAAGG+TGG 0.626831 tig0022368:+99115 None:intergenic
TCTCACCAATGGAAAGCACA+AGG 0.627318 tig0022368:+101479 None:intergenic
AAATGAGGCAGCAAATTCAA+GGG 0.628031 tig0022368:+100721 None:intergenic
ACCAATGGAAAGCACAAGGG+TGG 0.628099 tig0022368:+101483 None:intergenic
TCAAGCATCTGTTGGCGGTG+AGG 0.629370 tig0022368:-100993 Msa1399550:CDS
ATAGAAGAGGATCCTACTGG+TGG 0.629808 tig0022368:-99376 Msa1399550:CDS
GAATGGAGCTCCCAATAAGG+TGG 0.630059 tig0022368:-99326 Msa1399550:CDS
AAGAAGTACTAAGTTACTAG+AGG 0.632636 tig0022368:+98199 None:intergenic
AAACGGTATTAGGCATATCA+GGG 0.636543 tig0022368:-101362 Msa1399550:CDS
CACCAACATAAATTCGATCA+CGG 0.637531 tig0022368:+99939 None:intergenic
TGTATCTGATGAGATAGAAG+AGG 0.638499 tig0022368:-99389 Msa1399550:CDS
ATCTCATCAGATACATCCTG+CGG 0.640738 tig0022368:+99397 None:intergenic
CACTTGATCCTCCCACCAGT+AGG 0.641173 tig0022368:+99364 None:intergenic
TACTGGTGGGAGGATCAAGT+GGG 0.642790 tig0022368:-99362 Msa1399550:CDS
ATCAAAGAAACCGAAAGGGA+GGG 0.644655 tig0022368:+101415 None:intergenic
TCGAAGAAGTCAGTGACAGT+GGG 0.645296 tig0022368:-101453 Msa1399550:CDS
AGCCTGATGGAAACTGAAGA+GGG 0.645359 tig0022368:-101805 Msa1399550:CDS
TGTTATTGCTCTAAACGGAG+GGG 0.650865 tig0022368:-101263 Msa1399550:CDS
GGTGAATGTAACCAAGCCAA+GGG 0.653180 tig0022368:+100780 None:intergenic
TAGAAGAGGATCCTACTGGT+GGG 0.654087 tig0022368:-99375 Msa1399550:CDS
CATTGAAGAAGTAACAGGAA+TGG 0.657283 tig0022368:+101936 None:intergenic
GCTATGCATAAACTGAAGGG+TGG 0.658331 tig0022368:-102060 Msa1399550:CDS
TACCTTAACAGGAAAATAGG+CGG 0.658889 tig0022368:+99078 None:intergenic
AAGAGGATCCTACTGGTGGG+AGG 0.659185 tig0022368:-99372 Msa1399550:CDS
ATAATGGGAAACAGCTTCGG+GGG 0.660763 tig0022368:+100842 None:intergenic
ATGTTGGGAATTGCTCACAT+AGG 0.661639 tig0022368:+98788 None:intergenic
GCTGCTATGCATAAACTGAA+GGG 0.662832 tig0022368:-102063 None:intergenic
TCCACCACCTGGTATAAGAG+AGG 0.664259 tig0022368:+99252 None:intergenic
GCAGCCTGATTGGTGAACTG+AGG 0.664886 tig0022368:+98169 None:intergenic
GTTGTTATTGCTCTAAACGG+AGG 0.667721 tig0022368:-101265 Msa1399550:CDS
AGGATGGCCGTATTAATGAG+TGG 0.667784 tig0022368:-101339 Msa1399550:CDS
TGGTGTCCTGTCTAGAACCG+TGG 0.672484 tig0022368:-100921 Msa1399550:CDS
AGGGGATGATGATGATGTGG+AGG 0.675506 tig0022368:-101839 Msa1399550:CDS
TTCCACTTAGATACACGCCT+AGG 0.676656 tig0022368:-100598 Msa1399550:CDS
AATAATGGGAAACAGCTTCG+GGG 0.677979 tig0022368:+100841 None:intergenic
TGGCTTGGTTACATTCACCA+AGG 0.678729 tig0022368:-100776 Msa1399550:CDS
CCATGGTGTCAAAATCTATG+TGG 0.684812 tig0022368:+99461 None:intergenic
AACAAAGTGAAGAAAGCATG+GGG 0.689891 tig0022368:-98334 Msa1399550:three_prime_UTR
CTCACCAATGGAAAGCACAA+GGG 0.694771 tig0022368:+101480 None:intergenic
AAGATCCTCAAAGAAGATCG+AGG 0.696463 tig0022368:+101634 None:intergenic
ACCTGTGACCATATCCACCA+CGG 0.703407 tig0022368:+100904 None:intergenic
ATATGATCTCTTCCACACAA+AGG 0.705374 tig0022368:+99112 None:intergenic
AAGGCCTCTCTTATACCAGG+TGG 0.708767 tig0022368:-99256 Msa1399550:CDS
TGTCCTGTCTAGAACCGTGG+TGG 0.721061 tig0022368:-100918 Msa1399550:CDS
AAAATCTATGTGGTATGATG+CGG 0.724478 tig0022368:+99471 None:intergenic
TGTAACTGGTCAATTGATGG+AGG 0.727200 tig0022368:-101218 Msa1399550:CDS
CGGTATTAGGCATATCAGGG+AGG 0.747835 tig0022368:-101359 Msa1399550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTACTATTGAAAGATT+AGG - tig0022368:99466-99485 Msa1399550:CDS 15.0%
!!! AATTTTCATGATAAAGAATA+CGG - tig0022368:99863-99882 Msa1399550:intron 15.0%
!! GAAAATACAATAAATTACAA+CGG + tig0022368:100276-100295 None:intergenic 15.0%
!!! ATATTTGAATTTTACTAAAC+TGG - tig0022368:100357-100376 Msa1399550:intron 15.0%
!!! AAATAGAACTTTCTTAATTT+TGG - tig0022368:100439-100458 Msa1399550:intron 15.0%
!! CAAAAAATTAATACTATCTA+TGG + tig0022368:101257-101276 None:intergenic 15.0%
!!! AGTATTAATTTTTTGACAAA+CGG - tig0022368:101262-101281 Msa1399550:CDS 15.0%
!! CTAAAAATAAAGTCATAAAT+GGG + tig0022368:101843-101862 None:intergenic 15.0%
!! TCTAAAAATAAAGTCATAAA+TGG + tig0022368:101844-101863 None:intergenic 15.0%
!! CTGGATTTATTCATATATAT+AGG - tig0022368:99948-99967 Msa1399550:CDS 20.0%
!!! GTTTCTTTAATATTTGAGTT+AGG - tig0022368:100232-100251 Msa1399550:CDS 20.0%
!! AAATTCAAATATTAACACTC+TGG + tig0022368:100349-100368 None:intergenic 20.0%
!!! ATATTTTTGAAACTTGACTA+AGG - tig0022368:100411-100430 Msa1399550:intron 20.0%
!!! ATTTTATATGGAACAGTTAT+GGG - tig0022368:100887-100906 Msa1399550:CDS 20.0%
!! ATAATAACAGAAAGAATCAA+TGG + tig0022368:101076-101095 None:intergenic 20.0%
!! TCATATATATAGGTTTCTAG+AGG - tig0022368:99958-99977 Msa1399550:CDS 25.0%
!! TATATGATTTGGGAAAAAGA+CGG - tig0022368:100089-100108 Msa1399550:CDS 25.0%
! AAATATAAAACAATCCCTTC+TGG + tig0022368:100397-100416 None:intergenic 25.0%
!! TTGGAAATATCTATTTTGTG+CGG - tig0022368:100687-100706 Msa1399550:CDS 25.0%
! GAAATTGTACAATTTCATGT+TGG - tig0022368:100809-100828 Msa1399550:CDS 25.0%
!! CATTTTATATGGAACAGTTA+TGG - tig0022368:100886-100905 Msa1399550:CDS 25.0%
!!! TGTTGATTTCTTTTCTCATT+TGG - tig0022368:100949-100968 Msa1399550:CDS 25.0%
! TCAATGGCATAATATAGATT+AGG + tig0022368:101060-101079 None:intergenic 25.0%
! TTAAGAAATGATCATTAGAG+AGG - tig0022368:101439-101458 Msa1399550:CDS 25.0%
! ATAGTACTGTTATGATTGAT+AGG - tig0022368:101501-101520 Msa1399550:CDS 25.0%
!!! AACAGATCATTTTTGAACAA+GGG - tig0022368:101587-101606 Msa1399550:CDS 25.0%
! ATTCGTCAAATCAAAATTCT+CGG + tig0022368:101671-101690 None:intergenic 25.0%
!!! TTTTTAGAGACAAATGTTAC+TGG - tig0022368:101856-101875 Msa1399550:CDS 25.0%
! AAGACAAATAAATCCCAAAT+AGG + tig0022368:101966-101985 None:intergenic 25.0%
TGTATCAGTTTAAGGGAATA+GGG - tig0022368:98252-98271 Msa1399550:three_prime_UTR 30.0%
CCACAAAGAGTAAAAATTTG+AGG + tig0022368:98449-98468 None:intergenic 30.0%
! CCTCAAATTTTTACTCTTTG+TGG - tig0022368:98446-98465 Msa1399550:intron 30.0%
!! GGAGCTTATATATTTTGAAG+TGG - tig0022368:98868-98887 Msa1399550:intron 30.0%
!!! TATTTTGAAGTGGATGTAAC+TGG - tig0022368:98878-98897 Msa1399550:intron 30.0%
TTCAAGGGTTTCATATGAAA+GGG + tig0022368:99377-99396 None:intergenic 30.0%
ATTCAAGGGTTTCATATGAA+AGG + tig0022368:99378-99397 None:intergenic 30.0%
AAAAGCTGAATCAGATAAGT+GGG - tig0022368:99745-99764 Msa1399550:intron 30.0%
! ATATATAGGTTTCTAGAGGA+TGG - tig0022368:99962-99981 Msa1399550:CDS 30.0%
TGAATAGAGACAATTGTGTT+GGG + tig0022368:100145-100164 None:intergenic 30.0%
TTGAATAGAGACAATTGTGT+TGG + tig0022368:100146-100165 None:intergenic 30.0%
! TTTTTATTAGAGCTCCAGAA+GGG - tig0022368:100380-100399 Msa1399550:intron 30.0%
AAAATCTATGTGGTATGATG+CGG + tig0022368:100642-100661 None:intergenic 30.0%
ACAATTTCTTCCACCTTATT+GGG + tig0022368:100797-100816 None:intergenic 30.0%
TACAATTTCTTCCACCTTAT+TGG + tig0022368:100798-100817 None:intergenic 30.0%
GTATACCTTAACAGGAAAAT+AGG + tig0022368:101038-101057 None:intergenic 30.0%
TAGATTAGGTATACCTTAAC+AGG + tig0022368:101046-101065 None:intergenic 30.0%
CCATCAAGGAAAATATAACA+GGG + tig0022368:101148-101167 None:intergenic 30.0%
! CCTGTTATATTTTCCTTGAT+GGG - tig0022368:101146-101165 Msa1399550:CDS 30.0%
AATGAACAACACGAAATGTA+TGG + tig0022368:101221-101240 None:intergenic 30.0%
! TACATTTCGTGTTGTTCATT+TGG - tig0022368:101221-101240 Msa1399550:CDS 30.0%
GGAGTTCTATATATTTGTGT+AGG - tig0022368:101283-101302 Msa1399550:CDS 30.0%
TTTGTGTAGGATGTTATTGA+TGG - tig0022368:101296-101315 Msa1399550:CDS 30.0%
TTGTGTAGGATGTTATTGAT+GGG - tig0022368:101297-101316 Msa1399550:CDS 30.0%
GAGAAAAATTGCTGATGAAT+TGG - tig0022368:101361-101380 Msa1399550:CDS 30.0%
AGAAATACTGAAGAAACTTG+AGG - tig0022368:101397-101416 Msa1399550:CDS 30.0%
CTTGTTCAAAAATGATCTGT+TGG + tig0022368:101588-101607 None:intergenic 30.0%
!! CAACAGATCATTTTTGAACA+AGG - tig0022368:101586-101605 Msa1399550:CDS 30.0%
!! ACAGATCATTTTTGAACAAG+GGG - tig0022368:101588-101607 Msa1399550:CDS 30.0%
ATGCTTTCTTCACTTTGTTA+GGG + tig0022368:101775-101794 None:intergenic 30.0%
! TAACAAAGTGAAGAAAGCAT+GGG - tig0022368:101775-101794 Msa1399550:CDS 30.0%
!! AAGAAGTACTAAGTTACTAG+AGG + tig0022368:101914-101933 None:intergenic 30.0%
CTAGTAACTTAGTACTTCTT+TGG - tig0022368:101914-101933 Msa1399550:CDS 30.0%
CTTAAAGATATCACCGTACT+CGG + tig0022368:98096-98115 None:intergenic 35.0%
!! TGATATCTTTAAGGCTACGT+TGG - tig0022368:98103-98122 Msa1399550:three_prime_UTR 35.0%
CATTGAAGAAGTAACAGGAA+TGG + tig0022368:98177-98196 None:intergenic 35.0%
ACACACATTGAAGAAGTAAC+AGG + tig0022368:98182-98201 None:intergenic 35.0%
CATGGTCTGTATCAGTTTAA+GGG - tig0022368:98245-98264 Msa1399550:three_prime_UTR 35.0%
CTGTATCAGTTTAAGGGAAT+AGG - tig0022368:98251-98270 Msa1399550:three_prime_UTR 35.0%
GTATCAGTTTAAGGGAATAG+GGG - tig0022368:98253-98272 Msa1399550:three_prime_UTR 35.0%
!! ACAAGGTTTTTCAGTTTCCT+GGG + tig0022368:98353-98372 None:intergenic 35.0%
!! AACAAGGTTTTTCAGTTTCC+TGG + tig0022368:98354-98373 None:intergenic 35.0%
GGAAACTGAAAAACCTTGTT+AGG - tig0022368:98354-98373 Msa1399550:three_prime_UTR 35.0%
AAACCTTGTTAGGATTGATC+AGG - tig0022368:98364-98383 Msa1399550:three_prime_UTR 35.0%
GATGCCAATTACTGATATGA+AGG - tig0022368:98397-98416 Msa1399550:intron 35.0%
CTGACCTTCATATCAGTAAT+TGG + tig0022368:98404-98423 None:intergenic 35.0%
! ATTTTTACTCTTTGTGGTCG+TGG - tig0022368:98452-98471 Msa1399550:intron 35.0%
ACCTATCAAAGAAACCGAAA+GGG + tig0022368:98702-98721 None:intergenic 35.0%
AAGTTCATCCAAACGGTATT+AGG - tig0022368:98738-98757 Msa1399550:CDS 35.0%
AAACGGTATTAGGCATATCA+GGG - tig0022368:98748-98767 Msa1399550:CDS 35.0%
GAGTTCTCCACTCATTAATA+CGG + tig0022368:98781-98800 None:intergenic 35.0%
AAGAGGACAATTGCAAAAGT+TGG - tig0022368:98806-98825 Msa1399550:CDS 35.0%
AGAGGACAATTGCAAAAGTT+GGG - tig0022368:98807-98826 Msa1399550:CDS 35.0%
! CAGGTTGTTATTGCTCTAAA+CGG - tig0022368:98842-98861 Msa1399550:intron 35.0%
! TTGTTATTGCTCTAAACGGA+GGG - tig0022368:98846-98865 Msa1399550:intron 35.0%
! ACAATAATGGGAAACAGCTT+CGG + tig0022368:99274-99293 None:intergenic 35.0%
CTGTTTCCCATTATTGTAAG+AGG - tig0022368:99277-99296 Msa1399550:CDS 35.0%
CGCTTTCCTCTTACAATAAT+GGG + tig0022368:99286-99305 None:intergenic 35.0%
ACGCTTTCCTCTTACAATAA+TGG + tig0022368:99287-99306 None:intergenic 35.0%
!! CATATGAAAGGGGTGTTAAA+AGG + tig0022368:99366-99385 None:intergenic 35.0%
TCAAGGGTTTCATATGAAAG+GGG + tig0022368:99376-99395 None:intergenic 35.0%
AAATGAGGCAGCAAATTCAA+GGG + tig0022368:99392-99411 None:intergenic 35.0%
AAAATGAGGCAGCAAATTCA+AGG + tig0022368:99393-99412 None:intergenic 35.0%
ACATTGGTCAGATGAAAATG+AGG + tig0022368:99407-99426 None:intergenic 35.0%
! ATTTTCATCTGACCAATGTG+TGG - tig0022368:99408-99427 Msa1399550:CDS 35.0%
! CACTTATCTGATTCAGCTTT+TGG + tig0022368:99746-99765 None:intergenic 35.0%
CAAAAGCTGAATCAGATAAG+TGG - tig0022368:99744-99763 Msa1399550:intron 35.0%
AGAATTCTTGATCCCAAAAC+AGG - tig0022368:99779-99798 Msa1399550:intron 35.0%
! CAGGTTGTATTTCCTGTTTT+GGG + tig0022368:99794-99813 None:intergenic 35.0%
! ACAGGTTGTATTTCCTGTTT+TGG + tig0022368:99795-99814 None:intergenic 35.0%
! AGGAAATACAACCTGTCTTT+TGG - tig0022368:99799-99818 Msa1399550:intron 35.0%
TGAACTACTTCACAAAACTC+AGG - tig0022368:99994-100013 Msa1399550:CDS 35.0%
AAATCATATAGCCTGAGAAC+AGG + tig0022368:100079-100098 None:intergenic 35.0%
TGTTCTCAGGCTATATGATT+TGG - tig0022368:100078-100097 Msa1399550:CDS 35.0%
GTTCTCAGGCTATATGATTT+GGG - tig0022368:100079-100098 Msa1399550:CDS 35.0%
TGGGAAAAAGACGGTTATTA+AGG - tig0022368:100098-100117 Msa1399550:CDS 35.0%
GAATAGAGACAATTGTGTTG+GGG + tig0022368:100144-100163 None:intergenic 35.0%
AACATAAATTCGATCACGGT+AGG + tig0022368:100170-100189 None:intergenic 35.0%
TACCGTGATCGAATTTATGT+TGG - tig0022368:100169-100188 Msa1399550:CDS 35.0%
CACCAACATAAATTCGATCA+CGG + tig0022368:100174-100193 None:intergenic 35.0%
!! TTATGTTGGTGACATTCAAG+AGG - tig0022368:100183-100202 Msa1399550:CDS 35.0%
! GTTTTTATTAGAGCTCCAGA+AGG - tig0022368:100379-100398 Msa1399550:intron 35.0%
TCCATTACTGCAAGTATAGA+CGG - tig0022368:100564-100583 Msa1399550:CDS 35.0%
CATCAGCAAATATGTAGAGT+TGG + tig0022368:100598-100617 None:intergenic 35.0%
TGTATCTGATGAGATAGAAG+AGG - tig0022368:100721-100740 Msa1399550:CDS 35.0%
ATATGATCTCTTCCACACAA+AGG + tig0022368:101001-101020 None:intergenic 35.0%
TTTGTGTGGAAGAGATCATA+TGG - tig0022368:101000-101019 Msa1399550:CDS 35.0%
TACCTTAACAGGAAAATAGG+CGG + tig0022368:101035-101054 None:intergenic 35.0%
TTTGACATCCATATACTGGA+TGG - tig0022368:101113-101132 Msa1399550:CDS 35.0%
! CCCTGTTATATTTTCCTTGA+TGG - tig0022368:101145-101164 Msa1399550:CDS 35.0%
CCCATCAAGGAAAATATAAC+AGG + tig0022368:101149-101168 None:intergenic 35.0%
TGTGTAGGATGTTATTGATG+GGG - tig0022368:101298-101317 Msa1399550:CDS 35.0%
! ATTTTTCTCTGCAGATCCAT+TGG + tig0022368:101350-101369 None:intergenic 35.0%
AAATTGCTGATGAATTGGAC+AGG - tig0022368:101366-101385 Msa1399550:CDS 35.0%
TTTCTTCAGTATTTCTCCAG+GGG + tig0022368:101393-101412 None:intergenic 35.0%
GTTTCTTCAGTATTTCTCCA+GGG + tig0022368:101394-101413 None:intergenic 35.0%
AGTTTCTTCAGTATTTCTCC+AGG + tig0022368:101395-101414 None:intergenic 35.0%
!! GTATGATCTCCTATTTCTGT+TGG - tig0022368:101461-101480 Msa1399550:CDS 35.0%
GACAGTAAACCAACAGAAAT+AGG + tig0022368:101473-101492 None:intergenic 35.0%
!! GTGTGATTTGTATTTTGTGC+AGG - tig0022368:101701-101720 Msa1399550:CDS 35.0%
! TTTGTATTTTGTGCAGGTGT+TGG - tig0022368:101707-101726 Msa1399550:CDS 35.0%
CATGCTTTCTTCACTTTGTT+AGG + tig0022368:101776-101795 None:intergenic 35.0%
CTAACAAAGTGAAGAAAGCA+TGG - tig0022368:101774-101793 Msa1399550:CDS 35.0%
! AACAAAGTGAAGAAAGCATG+GGG - tig0022368:101776-101795 Msa1399550:CDS 35.0%
CGAGTACGGTGATATCTTTA+AGG - tig0022368:98094-98113 Msa1399550:three_prime_UTR 40.0%
TTCAATGTGTGTGCTCAAGT+CGG - tig0022368:98190-98209 Msa1399550:three_prime_UTR 40.0%
CCTTAAACTGATACAGACCA+TGG + tig0022368:98247-98266 None:intergenic 40.0%
CCATGGTCTGTATCAGTTTA+AGG - tig0022368:98244-98263 Msa1399550:three_prime_UTR 40.0%
! AATAGGGGATGATGATGATG+TGG - tig0022368:98268-98287 Msa1399550:three_prime_UTR 40.0%
CAACCTGATCAATCCTAACA+AGG + tig0022368:98370-98389 None:intergenic 40.0%
AAGATCCTCAAAGAAGATCG+AGG + tig0022368:98479-98498 None:intergenic 40.0%
! TCTTTGAGGATCTTGAGAAC+AGG - tig0022368:98485-98504 Msa1399550:intron 40.0%
ATCAAAGAAACCGAAAGGGA+GGG + tig0022368:98698-98717 None:intergenic 40.0%
TATCAAAGAAACCGAAAGGG+AGG + tig0022368:98699-98718 None:intergenic 40.0%
TCCCTTTCGGTTTCTTTGAT+AGG - tig0022368:98698-98717 Msa1399550:CDS 40.0%
CACCTATCAAAGAAACCGAA+AGG + tig0022368:98703-98722 None:intergenic 40.0%
CTCATGCAAGTTCATCCAAA+CGG - tig0022368:98731-98750 Msa1399550:CDS 40.0%
CTGATATGCCTAATACCGTT+TGG + tig0022368:98749-98768 None:intergenic 40.0%
CAAACGGTATTAGGCATATC+AGG - tig0022368:98747-98766 Msa1399550:CDS 40.0%
ATTAATGAGTGGAGAACTCC+TGG - tig0022368:98782-98801 Msa1399550:CDS 40.0%
TTTGCAATTGTCCTCTTTCC+AGG + tig0022368:98803-98822 None:intergenic 40.0%
! GTTGTTATTGCTCTAAACGG+AGG - tig0022368:98845-98864 Msa1399550:intron 40.0%
! TGTTATTGCTCTAAACGGAG+GGG - tig0022368:98847-98866 Msa1399550:intron 40.0%
GGATGTAACTGGTCAATTGA+TGG - tig0022368:98889-98908 Msa1399550:intron 40.0%
TGTAACTGGTCAATTGATGG+AGG - tig0022368:98892-98911 Msa1399550:intron 40.0%
ATGAGCCAACAGCAAGAAAA+CGG + tig0022368:98991-99010 None:intergenic 40.0%
GACAATCCGAATCTTATCAC+TGG - tig0022368:99018-99037 Msa1399550:intron 40.0%
CAGGATCCAGTGATAAGATT+CGG + tig0022368:99027-99046 None:intergenic 40.0%
AGAGTCTGCATACAATCATC+AGG + tig0022368:99046-99065 None:intergenic 40.0%
GATGATTGTATGCAGACTCT+AGG - tig0022368:99046-99065 Msa1399550:intron 40.0%
TCAAGGAAAAGAAGCGATTC+TGG + tig0022368:99094-99113 None:intergenic 40.0%
CAACAGATGCTTGAACTTCA+AGG + tig0022368:99111-99130 None:intergenic 40.0%
CTTGAAGTTCAAGCATCTGT+TGG - tig0022368:99109-99128 Msa1399550:CDS 40.0%
! AATAATGGGAAACAGCTTCG+GGG + tig0022368:99272-99291 None:intergenic 40.0%
! CAATAATGGGAAACAGCTTC+GGG + tig0022368:99273-99292 None:intergenic 40.0%
!! GTGTTAAAAGGAAGTGTCCT+TGG + tig0022368:99354-99373 None:intergenic 40.0%
AATTTGTGCTGCAACCCAAA+CGG - tig0022368:99536-99555 Msa1399550:CDS 40.0%
ACCACCAAAAGTTTCCGTTT+GGG + tig0022368:99553-99572 None:intergenic 40.0%
!!! TGCAAGGAAAGAGTGTTTTG+AGG - tig0022368:99618-99637 Msa1399550:intron 40.0%
ACCATAATGCTCATCAGAGA+GGG + tig0022368:99720-99739 None:intergenic 40.0%
AACCATAATGCTCATCAGAG+AGG + tig0022368:99721-99740 None:intergenic 40.0%
! TTTGGAGCTTCAGGATAATG+AGG - tig0022368:99817-99836 Msa1399550:intron 40.0%
! CCAGCAGTTAAACTCCTTTT+GGG + tig0022368:99932-99951 None:intergenic 40.0%
! TCCAGCAGTTAAACTCCTTT+TGG + tig0022368:99933-99952 None:intergenic 40.0%
!! CTTCACAAAACTCAGGTTGA+AGG - tig0022368:100001-100020 Msa1399550:CDS 40.0%
TGAAACTGACTAAGAGCAAG+AGG + tig0022368:100031-100050 None:intergenic 40.0%
TCTTGCTCTTAGTCAGTTTC+AGG - tig0022368:100030-100049 Msa1399550:CDS 40.0%
CTTGCTCTTAGTCAGTTTCA+GGG - tig0022368:100031-100050 Msa1399550:CDS 40.0%
TTTCAGGGAAGATTACTTGC+AGG - tig0022368:100046-100065 Msa1399550:CDS 40.0%
GGAAGATTACTTGCAGGATT+AGG - tig0022368:100052-100071 Msa1399550:CDS 40.0%
CTGACACTATAACCTGTCTT+TGG - tig0022368:100323-100342 Msa1399550:CDS 40.0%
! ACTTGCAGTAATGGAAAGAC+TGG + tig0022368:100559-100578 None:intergenic 40.0%
CCATTACTGCAAGTATAGAC+GGG - tig0022368:100565-100584 Msa1399550:CDS 40.0%
! CCATGGTGTCAAAATCTATG+TGG + tig0022368:100652-100671 None:intergenic 40.0%
!! CCACATAGATTTTGACACCA+TGG - tig0022368:100649-100668 Msa1399550:CDS 40.0%
!! ATAGATTTTGACACCATGGC+AGG - tig0022368:100653-100672 Msa1399550:CDS 40.0%
ATCTCATCAGATACATCCTG+CGG + tig0022368:100716-100735 None:intergenic 40.0%
!! GGTGGAGAGTGCATTTTATA+TGG - tig0022368:100875-100894 Msa1399550:CDS 40.0%
! GGAACAGTTATGGGAAGTAT+TGG - tig0022368:100896-100915 Msa1399550:CDS 40.0%
CTCATTTGGAGATGCATATG+AGG - tig0022368:100963-100982 Msa1399550:CDS 40.0%
! ATCCGCCTATTTTCCTGTTA+AGG - tig0022368:101030-101049 Msa1399550:CDS 40.0%
GCTGTTTGACATCCATATAC+TGG - tig0022368:101109-101128 Msa1399550:CDS 40.0%
GAAAGCTTCCATCCAGTATA+TGG + tig0022368:101124-101143 None:intergenic 40.0%
! GACTTTTTAAACCATGCCTC+TGG - tig0022368:101178-101197 Msa1399550:CDS 40.0%
! CATGTAGGTATTTTCACCAG+AGG + tig0022368:101197-101216 None:intergenic 40.0%
CACGAAATGTATGGACATGT+AGG + tig0022368:101212-101231 None:intergenic 40.0%
ATGTTGGGAATTGCTCACAT+AGG + tig0022368:101325-101344 None:intergenic 40.0%
GCAATTCCCAACATTACCAA+TGG - tig0022368:101331-101350 Msa1399550:CDS 40.0%
!! GCAGATCCATTGGTAATGTT+GGG + tig0022368:101340-101359 None:intergenic 40.0%
!! TGCAGATCCATTGGTAATGT+TGG + tig0022368:101341-101360 None:intergenic 40.0%
GCGCTAGTCAAATGTTGATA+TGG - tig0022368:101619-101638 Msa1399550:CDS 40.0%
! TGTTACTTGAGTAAGCCGTT+TGG - tig0022368:101742-101761 Msa1399550:CDS 40.0%
CATGGGGTTTCTCATTCATA+CGG - tig0022368:101792-101811 Msa1399550:CDS 40.0%
ATGGGGTTTCTCATTCATAC+GGG - tig0022368:101793-101812 Msa1399550:CDS 40.0%
TAAGGCTACGTTGGAACATG+AGG - tig0022368:98112-98131 Msa1399550:three_prime_UTR 45.0%
AAGGCTACGTTGGAACATGA+GGG - tig0022368:98113-98132 Msa1399550:three_prime_UTR 45.0%
TCAATGTGTGTGCTCAAGTC+GGG - tig0022368:98191-98210 Msa1399550:three_prime_UTR 45.0%
AGCCTGATGGAAACTGAAGA+GGG - tig0022368:98305-98324 Msa1399550:three_prime_UTR 45.0%
AACCCTCTTCAGTTTCCATC+AGG + tig0022368:98310-98329 None:intergenic 45.0%
GGTCAGCAATCTGTTTGAAG+AGG - tig0022368:98418-98437 Msa1399550:intron 45.0%
GAGGATCTTGAGAACAGGTT+TGG - tig0022368:98490-98509 Msa1399550:intron 45.0%
CAAACAGCACTAGGTATACC+GGG + tig0022368:98545-98564 None:intergenic 45.0%
CCAAACAGCACTAGGTATAC+CGG + tig0022368:98546-98565 None:intergenic 45.0%
TTCACAGTCCAAACAGCACT+AGG + tig0022368:98554-98573 None:intergenic 45.0%
! CTCACCAATGGAAAGCACAA+GGG + tig0022368:98633-98652 None:intergenic 45.0%
! TCTCACCAATGGAAAGCACA+AGG + tig0022368:98634-98653 None:intergenic 45.0%
TTCTTCGACTGTCTCACCAA+TGG + tig0022368:98645-98664 None:intergenic 45.0%
TCGAAGAAGTCAGTGACAGT+GGG - tig0022368:98657-98676 Msa1399550:intron 45.0%
!! AGTCAGTGACAGTGGGTTTT+TGG - tig0022368:98664-98683 Msa1399550:intron 45.0%
ATTAGGCATATCAGGGAGGA+TGG - tig0022368:98755-98774 Msa1399550:CDS 45.0%
AGGATGGCCGTATTAATGAG+TGG - tig0022368:98771-98790 Msa1399550:CDS 45.0%
AGTTGGGTCGAATAGACTTC+AGG - tig0022368:98823-98842 Msa1399550:intron 45.0%
AACTGGTCAATTGATGGAGG+TGG - tig0022368:98895-98914 Msa1399550:intron 45.0%
! GTGGAGAAGCATGAAATGTC+TGG - tig0022368:98914-98933 Msa1399550:intron 45.0%
! GTCTGGTGATGTTGCTTGTT+TGG - tig0022368:98931-98950 Msa1399550:intron 45.0%
!! AGATCCCGTTTTCTTGCTGT+TGG - tig0022368:98983-99002 Msa1399550:intron 45.0%
TGAGCCAACAGCAAGAAAAC+GGG + tig0022368:98990-99009 None:intergenic 45.0%
GAAGTTCAAGCATCTGTTGG+CGG - tig0022368:99112-99131 Msa1399550:CDS 45.0%
GATACTCGATCCCGATTCTT+AGG - tig0022368:99238-99257 Msa1399550:CDS 45.0%
GGGTCTCAATCCTAAGAATC+GGG + tig0022368:99251-99270 None:intergenic 45.0%
GGGGTCTCAATCCTAAGAAT+CGG + tig0022368:99252-99271 None:intergenic 45.0%
! ATAATGGGAAACAGCTTCGG+GGG + tig0022368:99271-99290 None:intergenic 45.0%
GGTGAATGTAACCAAGCCAA+GGG + tig0022368:99333-99352 None:intergenic 45.0%
TGGTGAATGTAACCAAGCCA+AGG + tig0022368:99334-99353 None:intergenic 45.0%
!! TGGCTTGGTTACATTCACCA+AGG - tig0022368:99334-99353 Msa1399550:CDS 45.0%
TCATCTGACCAATGTGTGGA+AGG - tig0022368:99412-99431 Msa1399550:CDS 45.0%
CAACTACACCTTCCACACAT+TGG + tig0022368:99423-99442 None:intergenic 45.0%
TTCCACTTAGATACACGCCT+AGG - tig0022368:99512-99531 Msa1399550:CDS 45.0%
TTCCTAGGCGTGTATCTAAG+TGG + tig0022368:99517-99536 None:intergenic 45.0%
GGTTGCAGCACAAATTTCCT+AGG + tig0022368:99532-99551 None:intergenic 45.0%
! GCAACCCAAACGGAAACTTT+TGG - tig0022368:99546-99565 Msa1399550:CDS 45.0%
! ACCCAAACGGAAACTTTTGG+TGG - tig0022368:99549-99568 Msa1399550:CDS 45.0%
CACCACCAAAAGTTTCCGTT+TGG + tig0022368:99554-99573 None:intergenic 45.0%
GTGGTGATTGAGAGTGATCA+AGG - tig0022368:99568-99587 Msa1399550:intron 45.0%
! GACAGAAAGTGCAGACCAAA+TGG - tig0022368:99663-99682 Msa1399550:intron 45.0%
AGTGCAGACCAAATGGAGAA+TGG - tig0022368:99670-99689 Msa1399550:intron 45.0%
CATAATGCTCATCAGAGAGG+GGG + tig0022368:99718-99737 None:intergenic 45.0%
CCATAATGCTCATCAGAGAG+GGG + tig0022368:99719-99738 None:intergenic 45.0%
GGGATCAAGAATTCTGATGC+AGG + tig0022368:99774-99793 None:intergenic 45.0%
!!! AACCTGTCTTTTGGAGCTTC+AGG - tig0022368:99808-99827 Msa1399550:intron 45.0%
ATCCTGAAGCTCCAAAAGAC+AGG + tig0022368:99813-99832 None:intergenic 45.0%
! TACGGAACTCTTTTAGCCGT+TGG - tig0022368:99881-99900 Msa1399550:intron 45.0%
GACTGCAATTTACGCCCAAA+AGG - tig0022368:99915-99934 Msa1399550:intron 45.0%
CCCAAAAGGAGTTTAACTGC+TGG - tig0022368:99929-99948 Msa1399550:CDS 45.0%
TTAACACTCTGGCCAAAGAC+AGG + tig0022368:100338-100357 None:intergenic 45.0%
CCCGTCTATACTTGCAGTAA+TGG + tig0022368:100568-100587 None:intergenic 45.0%
CTGATGATTGCGTTCCAAGA+TGG - tig0022368:100612-100631 Msa1399550:CDS 45.0%
TATGATGCGGTAAGCCATCT+TGG + tig0022368:100629-100648 None:intergenic 45.0%
GAGATAGAAGAGGATCCTAC+TGG - tig0022368:100731-100750 Msa1399550:CDS 45.0%
ATAGAAGAGGATCCTACTGG+TGG - tig0022368:100734-100753 Msa1399550:CDS 45.0%
TAGAAGAGGATCCTACTGGT+GGG - tig0022368:100735-100754 Msa1399550:CDS 45.0%
TGTGATCTCATGCCTGCAAA+AGG - tig0022368:100835-100854 Msa1399550:CDS 45.0%
! GTATAAGAGAGGCCTTTTGC+AGG + tig0022368:100850-100869 None:intergenic 45.0%
CAAAAGGCCTCTCTTATACC+AGG - tig0022368:100851-100870 Msa1399550:CDS 45.0%
TTTGGAGATGCATATGAGGC+AGG - tig0022368:100967-100986 Msa1399550:CDS 45.0%
CAGGATAATCCACCTTTGTG+TGG - tig0022368:100986-101005 Msa1399550:CDS 45.0%
TGATCTCTTCCACACAAAGG+TGG + tig0022368:100998-101017 None:intergenic 45.0%
AGTCATAAGCAGACCCATCA+AGG + tig0022368:101162-101181 None:intergenic 45.0%
! AGGTATTTTCACCAGAGGCA+TGG + tig0022368:101192-101211 None:intergenic 45.0%
CTTCACTTTGTTAGGGAGCA+AGG + tig0022368:101768-101787 None:intergenic 45.0%
GGTTTCTCATTCATACGGGA+AGG - tig0022368:101797-101816 Msa1399550:CDS 45.0%
TTCTCATTCATACGGGAAGG+CGG - tig0022368:101800-101819 Msa1399550:CDS 45.0%
ACCAATCAGGCTGCCTATTT+GGG - tig0022368:101950-101969 Msa1399550:CDS 45.0%
TTCCTTCTGCAGACCGAGTA+CGG - tig0022368:98080-98099 Msa1399550:three_prime_UTR 50.0%
CGTTGGAACATGAGGGTGAT+CGG - tig0022368:98120-98139 Msa1399550:three_prime_UTR 50.0%
CAATGTGTGTGCTCAAGTCG+GGG - tig0022368:98192-98211 Msa1399550:three_prime_UTR 50.0%
! CAAGTCGGGGTTCTTGTTTG+CGG - tig0022368:98205-98224 Msa1399550:three_prime_UTR 50.0%
TTGTTTGCGGCGTCTGAGTT+TGG - tig0022368:98218-98237 Msa1399550:three_prime_UTR 50.0%
GCGTCTGAGTTTGGAAACCA+TGG - tig0022368:98227-98246 Msa1399550:three_prime_UTR 50.0%
! AGGGGATGATGATGATGTGG+AGG - tig0022368:98271-98290 Msa1399550:three_prime_UTR 50.0%
GAGCCTGATGGAAACTGAAG+AGG - tig0022368:98304-98323 Msa1399550:three_prime_UTR 50.0%
! TTCCTGGGCTGGAAAAACAC+AGG + tig0022368:98338-98357 None:intergenic 50.0%
!! GGTTTTTCAGTTTCCTGGGC+TGG + tig0022368:98349-98368 None:intergenic 50.0%
GTGGACCTCGATCTTCTTTG+AGG - tig0022368:98471-98490 Msa1399550:intron 50.0%
AGGTTTGGCTGTCAGTGAGA+TGG - tig0022368:98505-98524 Msa1399550:three_prime_UTR 50.0%
ATGGCAGTTTCCAAGCTTCC+CGG - tig0022368:98524-98543 Msa1399550:three_prime_UTR 50.0%
ACTAGGTATACCGGGAAGCT+TGG + tig0022368:98537-98556 None:intergenic 50.0%
! CCGGTATACCTAGTGCTGTT+TGG - tig0022368:98543-98562 Msa1399550:intron 50.0%
! ACCAATGGAAAGCACAAGGG+TGG + tig0022368:98630-98649 None:intergenic 50.0%
GTCGAAGAAGTCAGTGACAG+TGG - tig0022368:98656-98675 Msa1399550:intron 50.0%
CGGTATTAGGCATATCAGGG+AGG - tig0022368:98751-98770 Msa1399550:CDS 50.0%
AGTGGAGAACTCCTGGAAAG+AGG - tig0022368:98789-98808 Msa1399550:CDS 50.0%
CGTTCAGGAAAAGGCTAGCA+GGG + tig0022368:99156-99175 None:intergenic 50.0%
GCAAACCAGCGTTCAGGAAA+AGG + tig0022368:99165-99184 None:intergenic 50.0%
CATTCTGCAAACCAGCGTTC+AGG + tig0022368:99171-99190 None:intergenic 50.0%
!! CTGAACGCTGGTTTGCAGAA+TGG - tig0022368:99169-99188 Msa1399550:CDS 50.0%
!! TATCCACCACGGTTCTAGAC+AGG + tig0022368:99198-99217 None:intergenic 50.0%
!! GTCTAGAACCGTGGTGGATA+TGG - tig0022368:99198-99217 Msa1399550:CDS 50.0%
ACCTGTGACCATATCCACCA+CGG + tig0022368:99209-99228 None:intergenic 50.0%
! GAAGGTGTAGTTGCTGTTGC+TGG - tig0022368:99430-99449 Msa1399550:CDS 50.0%
! TGTAGTTGCTGTTGCTGGTG+AGG - tig0022368:99435-99454 Msa1399550:CDS 50.0%
!!! TGTTTTGAGGCTGCTCAAGC+TGG - tig0022368:99631-99650 Msa1399550:intron 50.0%
!!! GTTTTGAGGCTGCTCAAGCT+GGG - tig0022368:99632-99651 Msa1399550:intron 50.0%
!!! TTTTGAGGCTGCTCAAGCTG+GGG - tig0022368:99633-99652 Msa1399550:intron 50.0%
CTGCTCAAGCTGGGGAAAAT+GGG - tig0022368:99641-99660 Msa1399550:intron 50.0%
GCAGACCAAATGGAGAATGG+CGG - tig0022368:99673-99692 Msa1399550:intron 50.0%
ATCCTCCGCCATTCTCCATT+TGG + tig0022368:99681-99700 None:intergenic 50.0%
CCCCTCTCTGATGAGCATTA+TGG - tig0022368:99716-99735 Msa1399550:intron 50.0%
TTTAGCCGTTGGCACAGCAA+AGG - tig0022368:99892-99911 Msa1399550:intron 50.0%
TTAGCCGTTGGCACAGCAAA+GGG - tig0022368:99893-99912 Msa1399550:intron 50.0%
CAGGATTAGGACCTGTTCTC+AGG - tig0022368:100065-100084 Msa1399550:CDS 50.0%
! TTTTGACACCATGGCAGGTG+CGG - tig0022368:100658-100677 Msa1399550:CDS 50.0%
TACTGGTGGGAGGATCAAGT+GGG - tig0022368:100748-100767 Msa1399550:CDS 50.0%
GCTGAATGGAGCTCCCAATA+AGG - tig0022368:100781-100800 Msa1399550:CDS 50.0%
GAATGGAGCTCCCAATAAGG+TGG - tig0022368:100784-100803 Msa1399550:CDS 50.0%
AAGGCCTCTCTTATACCAGG+TGG - tig0022368:100854-100873 Msa1399550:CDS 50.0%
TCCACCACCTGGTATAAGAG+AGG + tig0022368:100861-100880 None:intergenic 50.0%
AAAATGCACTCTCCACCACC+TGG + tig0022368:100872-100891 None:intergenic 50.0%
!! TTTGTGCAGGTGTTGGCGAA+AGG - tig0022368:101714-101733 Msa1399550:CDS 50.0%
TGTTAGGGAGCAAGGCCAAA+CGG + tig0022368:101760-101779 None:intergenic 50.0%
TGTCCCTCAGTTCACCAATC+AGG - tig0022368:101937-101956 Msa1399550:CDS 50.0%
CAGCCTGATTGGTGAACTGA+GGG + tig0022368:101943-101962 None:intergenic 50.0%
CACCAATCAGGCTGCCTATT+TGG - tig0022368:101949-101968 Msa1399550:CDS 50.0%
TCCCAAATAGGCAGCCTGAT+TGG + tig0022368:101954-101973 None:intergenic 50.0%
! AGCCTGTGTTTTTCCAGCCC+AGG - tig0022368:98333-98352 Msa1399550:three_prime_UTR 55.0%
! GGAAAGCACAAGGGTGGCAT+TGG + tig0022368:98624-98643 None:intergenic 55.0%
GCCACCCTTGTGCTTTCCAT+TGG - tig0022368:98626-98645 Msa1399550:intron 55.0%
GGACACTACTCCCTCCCTTT+CGG - tig0022368:98685-98704 Msa1399550:exon 55.0%
GACATTGCTCCAGTGCCTGA+AGG - tig0022368:98953-98972 Msa1399550:intron 55.0%
CTTTGTCTGCCTTCAGGCAC+TGG + tig0022368:98965-98984 None:intergenic 55.0%
CGGGATCTTTGTCTGCCTTC+AGG + tig0022368:98971-98990 None:intergenic 55.0%
TCAAGCATCTGTTGGCGGTG+AGG - tig0022368:99117-99136 Msa1399550:CDS 55.0%
CATCTGTTGGCGGTGAGGAT+GGG - tig0022368:99122-99141 Msa1399550:CDS 55.0%
ATCTGTTGGCGGTGAGGATG+GGG - tig0022368:99123-99142 Msa1399550:CDS 55.0%
GCGTTCAGGAAAAGGCTAGC+AGG + tig0022368:99157-99176 None:intergenic 55.0%
!!! GCTAGCCTTTTCCTGAACGC+TGG - tig0022368:99157-99176 Msa1399550:CDS 55.0%
! TGGTGTCCTGTCTAGAACCG+TGG - tig0022368:99189-99208 Msa1399550:CDS 55.0%
! TGTCCTGTCTAGAACCGTGG+TGG - tig0022368:99192-99211 Msa1399550:CDS 55.0%
!! ACCGTGGTGGATATGGTCAC+AGG - tig0022368:99205-99224 Msa1399550:CDS 55.0%
! CAGAAGAGCGTGAAGCTGCA+AGG - tig0022368:99602-99621 Msa1399550:intron 55.0%
GCTGCTCAAGCTGGGGAAAA+TGG - tig0022368:99640-99659 Msa1399550:intron 55.0%
GACCAAATGGAGAATGGCGG+AGG - tig0022368:99676-99695 Msa1399550:intron 55.0%
! ATGGAGAATGGCGGAGGATG+AGG - tig0022368:99682-99701 Msa1399550:intron 55.0%
! CAGTCCCTTTGCTGTGCCAA+CGG + tig0022368:99900-99919 None:intergenic 55.0%
AAACTTGTCCGCACCTGCCA+TGG + tig0022368:100669-100688 None:intergenic 55.0%
ATGGCAGGTGCGGACAAGTT+TGG - tig0022368:100668-100687 Msa1399550:CDS 55.0%
! CTATTTTGTGCGGTTGCCGC+AGG - tig0022368:100697-100716 Msa1399550:CDS 55.0%
AAGAGGATCCTACTGGTGGG+AGG - tig0022368:100738-100757 Msa1399550:CDS 55.0%
CACTTGATCCTCCCACCAGT+AGG + tig0022368:100749-100768 None:intergenic 55.0%
CTACTGGTGGGAGGATCAAG+TGG - tig0022368:100747-100766 Msa1399550:CDS 55.0%
GCCTCTCTTATACCAGGTGG+TGG - tig0022368:100857-100876 Msa1399550:CDS 55.0%
GATGAATTGGACAGGACCCC+TGG - tig0022368:101374-101393 Msa1399550:CDS 55.0%
GCAGCCTGATTGGTGAACTG+AGG + tig0022368:101944-101963 None:intergenic 55.0%
CACCGTACTCGGTCTGCAGA+AGG + tig0022368:98085-98104 None:intergenic 60.0%
TTCCATCAGGCTCGCAGACG+AGG + tig0022368:98297-98316 None:intergenic 60.0%
GCATCTGTTGGCGGTGAGGA+TGG - tig0022368:99121-99140 Msa1399550:CDS 60.0%
TCTGCCTGTCAAGTCGCCCT+TGG - tig0022368:99314-99333 Msa1399550:CDS 60.0%
CAAGCCAAGGGCGACTTGAC+AGG + tig0022368:99321-99340 None:intergenic 60.0%
CTGTCAAGTCGCCCTTGGCT+TGG - tig0022368:99319-99338 Msa1399550:CDS 60.0%
TGGGAGGATCAAGTGGGAGC+AGG - tig0022368:100754-100773 Msa1399550:CDS 60.0%
GGGAGGATCAAGTGGGAGCA+GGG - tig0022368:100755-100774 Msa1399550:CDS 60.0%
GGAGGATCAAGTGGGAGCAG+GGG - tig0022368:100756-100775 Msa1399550:CDS 60.0%
TGGGAGCAGGGGAAGCTGAA+TGG - tig0022368:100767-100786 Msa1399550:CDS 60.0%
GGCCTCGTCTGCGAGCCTGA+TGG - tig0022368:98292-98311 Msa1399550:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
tig0022368 gene 98053 102079 98053 ID=Msa1399550;Name=Msa1399550
tig0022368 mRNA 98053 102079 98053 ID=Msa1399550-mRNA-1;Parent=Msa1399550;Name=Msa1399550-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.8|0.66|1|0.6|0.66|6|445|897
tig0022368 exon 98053 98409 98053 ID=Msa1399550-mRNA-1:exon:17216;Parent=Msa1399550-mRNA-1
tig0022368 exon 98492 98561 98492 ID=Msa1399550-mRNA-1:exon:17215;Parent=Msa1399550-mRNA-1
tig0022368 exon 98672 98827 98672 ID=Msa1399550-mRNA-1:exon:17214;Parent=Msa1399550-mRNA-1
tig0022368 exon 99081 99572 99081 ID=Msa1399550-mRNA-1:exon:17213;Parent=Msa1399550-mRNA-1
tig0022368 exon 99928 100373 99928 ID=Msa1399550-mRNA-1:exon:17212;Parent=Msa1399550-mRNA-1
tig0022368 exon 100462 102079 100462 ID=Msa1399550-mRNA-1:exon:17211;Parent=Msa1399550-mRNA-1
tig0022368 CDS 100462 102079 100462 ID=Msa1399550-mRNA-1:cds;Parent=Msa1399550-mRNA-1
tig0022368 CDS 99928 100373 99928 ID=Msa1399550-mRNA-1:cds;Parent=Msa1399550-mRNA-1
tig0022368 CDS 99081 99572 99081 ID=Msa1399550-mRNA-1:cds;Parent=Msa1399550-mRNA-1
tig0022368 CDS 98690 98827 98690 ID=Msa1399550-mRNA-1:cds;Parent=Msa1399550-mRNA-1
tig0022368 three_prime_UTR 98672 98689 98672 ID=Msa1399550-mRNA-1:three_prime_utr;Parent=Msa1399550-mRNA-1
tig0022368 three_prime_UTR 98492 98561 98492 ID=Msa1399550-mRNA-1:three_prime_utr;Parent=Msa1399550-mRNA-1
tig0022368 three_prime_UTR 98053 98409 98053 ID=Msa1399550-mRNA-1:three_prime_utr;Parent=Msa1399550-mRNA-1
Gene Sequence

>Msa1399550

ATGCATAAACTGAAGGGTGGGTTCTTTTTCCTTCTGCAGACCGAGTACGGTGATATCTTTAAGGCTACGTTGGAACATGAGGGTGATCGGATTTCTGAATTGAAGATCAAGTATTTTGATACCATTCCTGTTACTTCTTCAATGTGTGTGCTCAAGTCGGGGTTCTTGTTTGCGGCGTCTGAGTTTGGAAACCATGGTCTGTATCAGTTTAAGGGAATAGGGGATGATGATGATGTGGAGGCCTCGTCTGCGAGCCTGATGGAAACTGAAGAGGGTTTTCAGCCTGTGTTTTTCCAGCCCAGGAAACTGAAAAACCTTGTTAGGATTGATCAGGTTGAAAGTTTGATGCCAATTACTGATATGAAGGTCAGCAATCTGTTTGAAGAGGAGACTCCTCAAATTTTTACTCTTTGTGGTCGTGGACCTCGATCTTCTTTGAGGATCTTGAGAACAGGTTTGGCTGTCAGTGAGATGGCAGTTTCCAAGCTTCCCGGTATACCTAGTGCTGTTTGGACTGTGAAGAAGAATGTCATTGATGAGTTTGATGCTTATATCGTTGTGTCGTTCACCAATGCCACCCTTGTGCTTTCCATTGGTGAGACAGTCGAAGAAGTCAGTGACAGTGGGTTTTTGGACACTACTCCCTCCCTTTCGGTTTCTTTGATAGGTGATGATTCTCTCATGCAAGTTCATCCAAACGGTATTAGGCATATCAGGGAGGATGGCCGTATTAATGAGTGGAGAACTCCTGGAAAGAGGACAATTGCAAAAGTTGGGTCGAATAGACTTCAGGTTGTTATTGCTCTAAACGGAGGGGAGCTTATATATTTTGAAGTGGATGTAACTGGTCAATTGATGGAGGTGGAGAAGCATGAAATGTCTGGTGATGTTGCTTGTTTGGACATTGCTCCAGTGCCTGAAGGCAGACAAAGATCCCGTTTTCTTGCTGTTGGCTCATATGACAAGACAATCCGAATCTTATCACTGGATCCTGATGATTGTATGCAGACTCTAGGTATACAGAGTCTTTCTTCAGCTCCAGAATCGCTTCTTTTCCTTGAAGTTCAAGCATCTGTTGGCGGTGAGGATGGGGCAGATCACCCTGCTAGCCTTTTCCTGAACGCTGGTTTGCAGAATGGTGTCCTGTCTAGAACCGTGGTGGATATGGTCACAGGTCTGCTTTCTGATACTCGATCCCGATTCTTAGGATTGAGACCCCCGAAGCTGTTTCCCATTATTGTAAGAGGAAAGCGTGCTATGCTCTGCCTGTCAAGTCGCCCTTGGCTTGGTTACATTCACCAAGGACACTTCCTTTTAACACCCCTTTCATATGAAACCCTTGAATTTGCTGCCTCATTTTCATCTGACCAATGTGTGGAAGGTGTAGTTGCTGTTGCTGGTGAGGCGTTGAGAATTTTTACTATTGAAAGATTAGGAGAAACATTTAACGAGACAGTTATTCCACTTAGATACACGCCTAGGAAATTTGTGCTGCAACCCAAACGGAAACTTTTGGTGGTGATTGAGAGTGATCAAGGAGCATTTACTGCAGAAGAGCGTGAAGCTGCAAGGAAAGAGTGTTTTGAGGCTGCTCAAGCTGGGGAAAATGGGACAGAAAATAAGTGGGCATCCTGCATCAGAATTCTTGATCCCAAAACAGGAAATACAACCTGTCTTTTGGAGCTTCAGGATAATGAGGCTGCATTCAGCGTATGCACAGTAAATTTTCATGATAAAGAATACGGAACTCTTTTAGCCGTTGGCACAGCAAAGGGACTGCAATTTACGCCCAAAAGGAGTTTAACTGCTGGATTTATTCATATATATAGGTTTCTAGAGGATGGAAGATCTCTTGAACTACTTCACAAAACTCAGGTTGAAGGTGTTCCTCTTGCTCTTAGTCAGTTTCAGGGAAGATTACTTGCAGGATTAGGACCTGTTCTCAGGCTATATGATTTGGGAAAAAGACGGTTATTAAGGAAGTGTGAGAATAAGCTATTCCCCAACACAATTGTCTCTATTCAAACCTACCGTGATCGAATTTATGTTGGTGACATTCAAGAGTCTTTCCATTACTGCAAGTATAGACGGGATGAAAACCAACTCTACATATTTGCTGATGATTGCGTTCCAAGATGGCTTACCGCATCATACCACATAGATTTTGACACCATGGCAGGTGCGGACAAGTTTGGAAATATCTATTTTGTGCGGTTGCCGCAGGATGTATCTGATGAGATAGAAGAGGATCCTACTGGTGGGAGGATCAAGTGGGAGCAGGGGAAGCTGAATGGAGCTCCCAATAAGGTGGAAGAAATTGTACAATTTCATGTTGGTGATGTGATCTCATGCCTGCAAAAGGCCTCTCTTATACCAGGTGGTGGAGAGTGCATTTTATATGGAACAGTTATGGGAAGTATTGGAGCATTACATGCTTTTACTTCACGAGATGATGTTGATTTCTTTTCTCATTTGGAGATGCATATGAGGCAGGATAATCCACCTTTGTGTGGAAGAGATCATATGGCTTATAGATCCGCCTATTTTCCTGTTAAGGATGTTATTGATGGGGACCTATGTGAGCAATTCCCAACATTACCAATGGATCTGCAGAGAAAAATTGCTGATGAATTGGACAGGACCCCTGGAGAAATACTGAAGAAACTTGAGGAAGTACGAAATAAGATTATTTAA
Protein sequence

>Msa1399550

MHKLKGGFFFLLQTEYGDIFKATLEHEGDRISELKIKYFDTIPVTSSMCVLKSGFLFAASEFGNHGLYQFKGIGDDDDVEASSASLMETEEGFQPVFFQPRKLKNLVRIDQVESLMPITDMKVSNLFEEETPQIFTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNVIDEFDAYIVVSFTNATLVLSIGETVEEVSDSGFLDTTPSLSVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRTIAKVGSNRLQVVIALNGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDKTIRILSLDPDDCMQTLGIQSLSSAPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLSRTVVDMVTGLLSDTRSRFLGLRPPKLFPIIVRGKRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCVEGVVAVAGEALRIFTIERLGETFNETVIPLRYTPRKFVLQPKRKLLVVIESDQGAFTAEEREAARKECFEAAQAGENGTENKWASCIRILDPKTGNTTCLLELQDNEAAFSVCTVNFHDKEYGTLLAVGTAKGLQFTPKRSLTAGFIHIYRFLEDGRSLELLHKTQVEGVPLALSQFQGRLLAGLGPVLRLYDLGKRRLLRKCENKLFPNTIVSIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKLNGAPNKVEEIVQFHVGDVISCLQKASLIPGGGECILYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPGEILKKLEEVRNKII*