AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0645960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0645960 MtrunA17_Chr4g0023621 96.899 129 4 0 1 129 1 129 5.05e-87 252
Msa0645960 MtrunA17_Chr2g0323081 70.769 130 38 0 1 130 1 130 3.68e-63 191
Msa0645960 MtrunA17_Chr4g0049001 52.713 129 61 0 1 129 1 129 5.16e-50 158
Msa0645960 MtrunA17_Chr2g0280491 54.331 127 58 0 1 127 1 127 7.34e-43 140
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0645960 AT2G32280.1 63.566 129 47 0 1 129 1 129 1.31e-59 183
Msa0645960 AT2G32280.2 63.566 129 47 0 1 129 1 129 1.31e-59 183
Msa0645960 AT4G21310.1 59.690 129 52 0 1 129 1 129 4.73e-54 169
Msa0645960 AT4G21310.2 53.846 91 42 0 39 129 1 91 1.88e-33 115
Msa0645960 AT1G11500.1 38.028 142 76 2 6 140 6 142 9.87e-25 95.1
Msa0645960 AT1G11500.3 38.028 142 76 2 6 140 11 147 1.69e-24 94.7
Msa0645960 AT1G11500.2 40.625 96 52 1 45 140 24 114 2.01e-18 77.8
Msa0645960 AT1G05291.1 37.500 120 70 2 12 129 23 139 3.48e-13 65.1

Find 61 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGAAAACACAAATATTTC+TGG 0.152103 4_3:+51437472 None:intergenic
TGCGATTATGGCCCCTGTTT+TGG 0.195648 4_3:-51435332 Msa0645960:three_prime_UTR
TTCTCAACAAGTTGCGATTA+TGG 0.218709 4_3:-51435344 Msa0645960:three_prime_UTR
GATGTTGCAGCTGGTATTCT+TGG 0.255223 4_3:-51437396 Msa0645960:CDS
AATCATATTTCCCTTATGTT+AGG 0.259505 4_3:+51435382 None:intergenic
GTTGGGTGCAGCAGTGCTAT+TGG 0.296588 4_3:-51437154 Msa0645960:CDS
TGATTTACTCATTATTATCT+TGG 0.313721 4_3:-51435512 Msa0645960:three_prime_UTR
TTGGGTGCAGCAGTGCTATT+GGG 0.315421 4_3:-51437153 Msa0645960:CDS
CAATTGTGTTTGTTCTCAAC+AGG 0.330421 4_3:-51437094 Msa0645960:CDS
ATTGCAACCACCTAACAAAT+TGG 0.332978 4_3:+51437113 None:intergenic
AGTCATGATGCCTTCATGTT+GGG 0.345983 4_3:-51437177 Msa0645960:CDS
GGCAAAAGAGACCCATGTTT+AGG 0.350325 4_3:-51435425 Msa0645960:three_prime_UTR
TATATTACCAGGTTAAAATA+AGG 0.351790 4_3:+51437028 None:intergenic
GACGCCACGTGTCCCAAAAC+AGG 0.355530 4_3:+51435319 None:intergenic
CACCATCACTTTCTGTCCAT+TGG 0.356447 4_3:-51435743 Msa0645960:CDS
GGATTGTCCATGCTGGTGAT+AGG 0.356876 4_3:-51435807 Msa0645960:CDS
CAACATCCATGATAACAATT+AGG 0.363009 4_3:+51437412 None:intergenic
GCAAAAGAGACCCATGTTTA+GGG 0.381325 4_3:-51435424 Msa0645960:three_prime_UTR
ATCATATTTCCCTTATGTTA+GGG 0.383201 4_3:+51435383 None:intergenic
CATTGTTACCACTGCTTCCA+TGG 0.385326 4_3:-51435675 Msa0645960:CDS
GATGCCTTCATGTTGGGGTT+GGG 0.408304 4_3:-51437171 Msa0645960:CDS
AAAGTACTGAGAGTTGTCTA+TGG 0.408478 4_3:+51437052 None:intergenic
ATCAGGGTTGTAGTGGCTGT+TGG 0.413714 4_3:-51435828 Msa0645960:intron
AGCTGGTATTCTTGGCTTTG+AGG 0.413890 4_3:-51437388 Msa0645960:CDS
TTGTCTCCTAATTGTTATCA+TGG 0.414420 4_3:-51437418 Msa0645960:CDS
TTGAAAACACAAATATTTCT+GGG 0.422188 4_3:+51437473 None:intergenic
TGATGCCTTCATGTTGGGGT+TGG 0.426974 4_3:-51437172 Msa0645960:CDS
CGCAACTTGTTGAGAAGATA+AGG 0.431968 4_3:+51435351 None:intergenic
GATTGTCCATGCTGGTGATA+GGG 0.456865 4_3:-51435806 Msa0645960:CDS
AAAACAGGTTAAGCATTTGA+AGG 0.491275 4_3:-51437226 Msa0645960:intron
CATCACTTTCTGTCCATTGG+TGG 0.495015 4_3:-51435740 Msa0645960:CDS
TACAATATGGCTAGAGTAGG+AGG 0.513670 4_3:-51437450 Msa0645960:exon
TAGGGGCTATGTCAAACAAC+AGG 0.531371 4_3:-51435788 Msa0645960:CDS
AACATGAAGGCATCATGACT+TGG 0.534290 4_3:+51437180 None:intergenic
GTCATGATGCCTTCATGTTG+GGG 0.535583 4_3:-51437176 Msa0645960:CDS
GGCTGTTGGATTGTCCATGC+TGG 0.538448 4_3:-51435814 Msa0645960:CDS
TTCTCAACAGGAATTTGAGA+AGG 0.542952 4_3:-51437082 Msa0645960:CDS
CATATTTCCCTTATGTTAGG+GGG 0.545265 4_3:+51435385 None:intergenic
AAAACATGAAATTCCACCAA+TGG 0.549360 4_3:+51435727 None:intergenic
TCTTACAAAATACTAATCCA+TGG 0.550482 4_3:+51435658 None:intergenic
AGAGCATATTTCCCTAAACA+TGG 0.551374 4_3:+51435413 None:intergenic
CAATACAATATGGCTAGAGT+AGG 0.551922 4_3:-51437453 Msa0645960:exon
AGGTTAAGCATTTGAAGGTG+TGG 0.557434 4_3:-51437221 Msa0645960:CDS
GTTGTTGATCAGGGTTGTAG+TGG 0.569996 4_3:-51435835 Msa0645960:intron
AAGTCATGATGCCTTCATGT+TGG 0.571287 4_3:-51437178 Msa0645960:CDS
GTTATCATGGATGTTGCAGC+TGG 0.584347 4_3:-51437405 Msa0645960:CDS
AAGTACTGAGAGTTGTCTAT+GGG 0.588754 4_3:+51437053 None:intergenic
ATACTAATCCATGGAAGCAG+TGG 0.591196 4_3:+51435667 None:intergenic
ATTGTCCATGCTGGTGATAG+GGG 0.591559 4_3:-51435805 Msa0645960:CDS
TATGTCAAACAACAGGTCAA+AGG 0.592422 4_3:-51435781 Msa0645960:CDS
ACGCCACGTGTCCCAAAACA+GGG 0.593408 4_3:+51435320 None:intergenic
TCATATTTCCCTTATGTTAG+GGG 0.602228 4_3:+51435384 None:intergenic
TGCACCCAACCCCAACATGA+AGG 0.603813 4_3:+51437167 None:intergenic
TACTGAGAGTTGTCTATGGG+AGG 0.604411 4_3:+51437056 None:intergenic
AACAGGTCAAAGGATTCTTG+TGG 0.609881 4_3:-51435771 Msa0645960:CDS
GGCTGAAATAGCACAAAACA+AGG 0.619758 4_3:-51437367 Msa0645960:intron
AGTTCTAAGATTAGAAACAG+TGG 0.646953 4_3:+51437534 None:intergenic
CATAGCCCCTATCACCAGCA+TGG 0.647824 4_3:+51435800 None:intergenic
GAGCATATTTCCCTAAACAT+GGG 0.648214 4_3:+51435414 None:intergenic
CACCAATGGACAGAAAGTGA+TGG 0.662217 4_3:+51435741 None:intergenic
CGCCACGTGTCCCAAAACAG+GGG 0.699563 4_3:+51435321 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGAAATAATTAATAACA+AGG - chr4_3:51435570-51435589 Msa0645960:three_prime_UTR 10.0%
!!! AAATAGTACTTTTTTTAATT+GGG - chr4_3:51436876-51436895 Msa0645960:intron 10.0%
!!! TTTTGAAATAATTAATAACA+AGG - chr4_3:51435570-51435589 Msa0645960:three_prime_UTR 10.0%
!!! AAATAGTACTTTTTTTAATT+GGG - chr4_3:51436876-51436895 Msa0645960:intron 10.0%
!! TAAAATATATTCCAAAATGT+TGG + chr4_3:51435533-51435552 None:intergenic 15.0%
!!! TTTTTTATTTTCAACAAAAC+AGG - chr4_3:51435618-51435637 Msa0645960:exon 15.0%
!!! TCCAAATAAAATATTTTACA+GGG + chr4_3:51435977-51435996 None:intergenic 15.0%
!!! ATCCAAATAAAATATTTTAC+AGG + chr4_3:51435978-51435997 None:intergenic 15.0%
!! AAAATTAACTCAAATTAACA+GGG + chr4_3:51436115-51436134 None:intergenic 15.0%
!! GCAATTAAGTAAAAAAAAAA+AGG + chr4_3:51436292-51436311 None:intergenic 15.0%
!! AAAATGTTTGAATATCTAAT+CGG - chr4_3:51436480-51436499 Msa0645960:intron 15.0%
!!! CAAATAGTACTTTTTTTAAT+TGG - chr4_3:51436875-51436894 Msa0645960:intron 15.0%
!!! AATAGTACTTTTTTTAATTG+GGG - chr4_3:51436877-51436896 Msa0645960:intron 15.0%
!! ATATTTAGTGAATGATTATT+TGG + chr4_3:51436984-51437003 None:intergenic 15.0%
!! TAAAATATATTCCAAAATGT+TGG + chr4_3:51435533-51435552 None:intergenic 15.0%
!!! TTTTTTATTTTCAACAAAAC+AGG - chr4_3:51435618-51435637 Msa0645960:exon 15.0%
!!! TCCAAATAAAATATTTTACA+GGG + chr4_3:51435977-51435996 None:intergenic 15.0%
!!! ATCCAAATAAAATATTTTAC+AGG + chr4_3:51435978-51435997 None:intergenic 15.0%
!! AAAATTAACTCAAATTAACA+GGG + chr4_3:51436115-51436134 None:intergenic 15.0%
!! GCAATTAAGTAAAAAAAAAA+AGG + chr4_3:51436292-51436311 None:intergenic 15.0%
!! AAAATGTTTGAATATCTAAT+CGG - chr4_3:51436480-51436499 Msa0645960:intron 15.0%
!!! CAAATAGTACTTTTTTTAAT+TGG - chr4_3:51436875-51436894 Msa0645960:intron 15.0%
!!! AATAGTACTTTTTTTAATTG+GGG - chr4_3:51436877-51436896 Msa0645960:intron 15.0%
!! ATATTTAGTGAATGATTATT+TGG + chr4_3:51436984-51437003 None:intergenic 15.0%
!! TTGAAAACACAAATATTTCT+GGG + chr4_3:51435389-51435408 None:intergenic 20.0%
!! ATTGAAAACACAAATATTTC+TGG + chr4_3:51435390-51435409 None:intergenic 20.0%
!!! TTTGTGTTTTCAATACAATA+TGG - chr4_3:51435396-51435415 Msa0645960:three_prime_UTR 20.0%
!! TATATTACCAGGTTAAAATA+AGG + chr4_3:51435834-51435853 None:intergenic 20.0%
!!! TCCCTGTAAAATATTTTATT+TGG - chr4_3:51435973-51435992 Msa0645960:intron 20.0%
!! CAAATAATCTTCAAATTACA+AGG + chr4_3:51436006-51436025 None:intergenic 20.0%
!! CTTGTAATTTGAAGATTATT+TGG - chr4_3:51436004-51436023 Msa0645960:intron 20.0%
!! AAATTAACTCAAATTAACAG+GGG + chr4_3:51436114-51436133 None:intergenic 20.0%
!! CAAAATTAACTCAAATTAAC+AGG + chr4_3:51436116-51436135 None:intergenic 20.0%
!!! CTGTTAATTTGAGTTAATTT+TGG - chr4_3:51436114-51436133 Msa0645960:intron 20.0%
!!! AATTTGAAGTTTTTTGGTTT+TGG + chr4_3:51436189-51436208 None:intergenic 20.0%
!! AATCCAAAAAGAAAATTTAC+AGG - chr4_3:51436219-51436238 Msa0645960:intron 20.0%
!! ATCCAAAAAGAAAATTTACA+GGG - chr4_3:51436220-51436239 Msa0645960:intron 20.0%
!! AAATGTTTGAATATCTAATC+GGG - chr4_3:51436481-51436500 Msa0645960:intron 20.0%
!! TATTTAAAGAAAAGTGAAAG+TGG - chr4_3:51436563-51436582 Msa0645960:intron 20.0%
!! TATTGGATCAAAATACATTT+AGG + chr4_3:51436924-51436943 None:intergenic 20.0%
!! TATCAGTTACATTTAGTTAT+TGG + chr4_3:51436941-51436960 None:intergenic 20.0%
!! TGATTTACTCATTATTATCT+TGG - chr4_3:51437347-51437366 Msa0645960:intron 20.0%
!!! CTTTTGCCTTTTTTTAATAA+GGG + chr4_3:51437422-51437441 None:intergenic 20.0%
!!! TCTTTTGCCTTTTTTTAATA+AGG + chr4_3:51437423-51437442 None:intergenic 20.0%
!! TTGAAAACACAAATATTTCT+GGG + chr4_3:51435389-51435408 None:intergenic 20.0%
!! ATTGAAAACACAAATATTTC+TGG + chr4_3:51435390-51435409 None:intergenic 20.0%
!!! TTTGTGTTTTCAATACAATA+TGG - chr4_3:51435396-51435415 Msa0645960:three_prime_UTR 20.0%
!! TATATTACCAGGTTAAAATA+AGG + chr4_3:51435834-51435853 None:intergenic 20.0%
!!! TCCCTGTAAAATATTTTATT+TGG - chr4_3:51435973-51435992 Msa0645960:intron 20.0%
!! CAAATAATCTTCAAATTACA+AGG + chr4_3:51436006-51436025 None:intergenic 20.0%
!! CTTGTAATTTGAAGATTATT+TGG - chr4_3:51436004-51436023 Msa0645960:intron 20.0%
!! AAATTAACTCAAATTAACAG+GGG + chr4_3:51436114-51436133 None:intergenic 20.0%
!! CAAAATTAACTCAAATTAAC+AGG + chr4_3:51436116-51436135 None:intergenic 20.0%
!!! CTGTTAATTTGAGTTAATTT+TGG - chr4_3:51436114-51436133 Msa0645960:intron 20.0%
!!! AATTTGAAGTTTTTTGGTTT+TGG + chr4_3:51436189-51436208 None:intergenic 20.0%
!! AATCCAAAAAGAAAATTTAC+AGG - chr4_3:51436219-51436238 Msa0645960:intron 20.0%
!! ATCCAAAAAGAAAATTTACA+GGG - chr4_3:51436220-51436239 Msa0645960:intron 20.0%
!! AAATGTTTGAATATCTAATC+GGG - chr4_3:51436481-51436500 Msa0645960:intron 20.0%
!! TATTTAAAGAAAAGTGAAAG+TGG - chr4_3:51436563-51436582 Msa0645960:intron 20.0%
!! TATTGGATCAAAATACATTT+AGG + chr4_3:51436924-51436943 None:intergenic 20.0%
!! TATCAGTTACATTTAGTTAT+TGG + chr4_3:51436941-51436960 None:intergenic 20.0%
!! TGATTTACTCATTATTATCT+TGG - chr4_3:51437347-51437366 Msa0645960:intron 20.0%
!!! CTTTTGCCTTTTTTTAATAA+GGG + chr4_3:51437422-51437441 None:intergenic 20.0%
!!! TCTTTTGCCTTTTTTTAATA+AGG + chr4_3:51437423-51437442 None:intergenic 20.0%
!!! TAGTTTTGTTATTCCAAAAC+AGG + chr4_3:51435873-51435892 None:intergenic 25.0%
! TTGGAATAACAAAACTAGTT+AGG - chr4_3:51435876-51435895 Msa0645960:intron 25.0%
!! AATATTTTACAGGGAAAAAC+CGG + chr4_3:51435968-51435987 None:intergenic 25.0%
! TGTAGAGTCAAAATTTATGA+AGG - chr4_3:51436162-51436181 Msa0645960:intron 25.0%
!!! CCTTGTAATTTGAAGTTTTT+TGG + chr4_3:51436195-51436214 None:intergenic 25.0%
! CCAAAAAACTTCAAATTACA+AGG - chr4_3:51436192-51436211 Msa0645960:intron 25.0%
! AAAACTTCAAATTACAAGGA+CGG - chr4_3:51436196-51436215 Msa0645960:intron 25.0%
! TCCAAAAAGAAAATTTACAG+GGG - chr4_3:51436221-51436240 Msa0645960:intron 25.0%
! TTGTATCATTGTGATACTTA+TGG + chr4_3:51436323-51436342 None:intergenic 25.0%
! GTATCACAATGATACAATTT+AGG - chr4_3:51436326-51436345 Msa0645960:intron 25.0%
! ACGTAAATTTGGAGAAAATT+GGG + chr4_3:51436376-51436395 None:intergenic 25.0%
! AACGTAAATTTGGAGAAAAT+TGG + chr4_3:51436377-51436396 None:intergenic 25.0%
! AATGTTTGAATATCTAATCG+GGG - chr4_3:51436482-51436501 Msa0645960:intron 25.0%
!! TTAAGGTCAAAAGTACAATT+AGG - chr4_3:51436668-51436687 Msa0645960:intron 25.0%
!!! ACAATTAGGCCATTTTAATT+CGG - chr4_3:51436682-51436701 Msa0645960:intron 25.0%
!!! CTATGTACCATAGTTTTATT+CGG - chr4_3:51436813-51436832 Msa0645960:intron 25.0%
! TCTTACAAAATACTAATCCA+TGG + chr4_3:51437204-51437223 None:intergenic 25.0%
!! CTTTTGTAATAATTGTGCTA+AGG - chr4_3:51437313-51437332 Msa0645960:intron 25.0%
!!! GCAACATTTTAAAACTTATG+GGG + chr4_3:51437390-51437409 None:intergenic 25.0%
!!! CGCAACATTTTAAAACTTAT+GGG + chr4_3:51437391-51437410 None:intergenic 25.0%
!!! TCGCAACATTTTAAAACTTA+TGG + chr4_3:51437392-51437411 None:intergenic 25.0%
!!! GTTTTAAAATGTTGCGATTT+TGG - chr4_3:51437395-51437414 Msa0645960:CDS 25.0%
! TTTGGTCCCTTATTAAAAAA+AGG - chr4_3:51437413-51437432 Msa0645960:CDS 25.0%
! ATCATATTTCCCTTATGTTA+GGG + chr4_3:51437479-51437498 None:intergenic 25.0%
! AATCATATTTCCCTTATGTT+AGG + chr4_3:51437480-51437499 None:intergenic 25.0%
!!! TAGTTTTGTTATTCCAAAAC+AGG + chr4_3:51435873-51435892 None:intergenic 25.0%
! TTGGAATAACAAAACTAGTT+AGG - chr4_3:51435876-51435895 Msa0645960:intron 25.0%
!! AATATTTTACAGGGAAAAAC+CGG + chr4_3:51435968-51435987 None:intergenic 25.0%
! TGTAGAGTCAAAATTTATGA+AGG - chr4_3:51436162-51436181 Msa0645960:intron 25.0%
!!! CCTTGTAATTTGAAGTTTTT+TGG + chr4_3:51436195-51436214 None:intergenic 25.0%
! CCAAAAAACTTCAAATTACA+AGG - chr4_3:51436192-51436211 Msa0645960:intron 25.0%
! AAAACTTCAAATTACAAGGA+CGG - chr4_3:51436196-51436215 Msa0645960:intron 25.0%
! TCCAAAAAGAAAATTTACAG+GGG - chr4_3:51436221-51436240 Msa0645960:intron 25.0%
! TTGTATCATTGTGATACTTA+TGG + chr4_3:51436323-51436342 None:intergenic 25.0%
! GTATCACAATGATACAATTT+AGG - chr4_3:51436326-51436345 Msa0645960:intron 25.0%
! ACGTAAATTTGGAGAAAATT+GGG + chr4_3:51436376-51436395 None:intergenic 25.0%
! AACGTAAATTTGGAGAAAAT+TGG + chr4_3:51436377-51436396 None:intergenic 25.0%
! AATGTTTGAATATCTAATCG+GGG - chr4_3:51436482-51436501 Msa0645960:intron 25.0%
!! TTAAGGTCAAAAGTACAATT+AGG - chr4_3:51436668-51436687 Msa0645960:intron 25.0%
!!! ACAATTAGGCCATTTTAATT+CGG - chr4_3:51436682-51436701 Msa0645960:intron 25.0%
!!! CTATGTACCATAGTTTTATT+CGG - chr4_3:51436813-51436832 Msa0645960:intron 25.0%
! TCTTACAAAATACTAATCCA+TGG + chr4_3:51437204-51437223 None:intergenic 25.0%
!! CTTTTGTAATAATTGTGCTA+AGG - chr4_3:51437313-51437332 Msa0645960:intron 25.0%
!!! GCAACATTTTAAAACTTATG+GGG + chr4_3:51437390-51437409 None:intergenic 25.0%
!!! CGCAACATTTTAAAACTTAT+GGG + chr4_3:51437391-51437410 None:intergenic 25.0%
!!! TCGCAACATTTTAAAACTTA+TGG + chr4_3:51437392-51437411 None:intergenic 25.0%
!!! GTTTTAAAATGTTGCGATTT+TGG - chr4_3:51437395-51437414 Msa0645960:CDS 25.0%
! TTTGGTCCCTTATTAAAAAA+AGG - chr4_3:51437413-51437432 Msa0645960:CDS 25.0%
! ATCATATTTCCCTTATGTTA+GGG + chr4_3:51437479-51437498 None:intergenic 25.0%
! AATCATATTTCCCTTATGTT+AGG + chr4_3:51437480-51437499 None:intergenic 25.0%
!! AGTTCTAAGATTAGAAACAG+TGG + chr4_3:51435328-51435347 None:intergenic 30.0%
TTGTCTCCTAATTGTTATCA+TGG - chr4_3:51435441-51435460 Msa0645960:three_prime_UTR 30.0%
CAACATCCATGATAACAATT+AGG + chr4_3:51435450-51435469 None:intergenic 30.0%
! TATGCTTGAATCCAACATTT+TGG - chr4_3:51435519-51435538 Msa0645960:three_prime_UTR 30.0%
AAAACAGGTTAAGCATTTGA+AGG - chr4_3:51435633-51435652 Msa0645960:CDS 30.0%
!!! CATGTTTTAGCCAATTTGTT+AGG - chr4_3:51435736-51435755 Msa0645960:CDS 30.0%
!!! TACTTTGCCTTATTTTAACC+TGG - chr4_3:51435824-51435843 Msa0645960:CDS 30.0%
! ATTTTGTCCCCTGTAATTTT+AGG - chr4_3:51436046-51436065 Msa0645960:intron 30.0%
! ACCGATTTCCTAAAATTACA+GGG + chr4_3:51436057-51436076 None:intergenic 30.0%
! AACCGATTTCCTAAAATTAC+AGG + chr4_3:51436058-51436077 None:intergenic 30.0%
ACTCTACAAAATCGATGATA+TGG + chr4_3:51436150-51436169 None:intergenic 30.0%
CCAAAAAGAAAATTTACAGG+GGG - chr4_3:51436222-51436241 Msa0645960:intron 30.0%
TGGAAATGACGTATATTACA+GGG - chr4_3:51436250-51436269 Msa0645960:intron 30.0%
AATTTGGAGAAAATTGGGAT+GGG + chr4_3:51436371-51436390 None:intergenic 30.0%
AAATTTGGAGAAAATTGGGA+TGG + chr4_3:51436372-51436391 None:intergenic 30.0%
ATGTCATCTCAACGTAAATT+TGG + chr4_3:51436387-51436406 None:intergenic 30.0%
GTATTAAAGAATAGCCACAT+TGG + chr4_3:51436441-51436460 None:intergenic 30.0%
! TGTCACTTCAGTGAAAAATT+TGG - chr4_3:51436618-51436637 Msa0645960:intron 30.0%
TTGCACAATCATGATACTTA+AGG - chr4_3:51436651-51436670 Msa0645960:intron 30.0%
!!! CAATTAGGCCATTTTAATTC+GGG - chr4_3:51436683-51436702 Msa0645960:intron 30.0%
!!! ACCATAGTTTTATTCGGAAA+CGG - chr4_3:51436819-51436838 Msa0645960:intron 30.0%
GATCAACAACACAATCAAAA+GGG + chr4_3:51437014-51437033 None:intergenic 30.0%
TGATCAACAACACAATCAAA+AGG + chr4_3:51437015-51437034 None:intergenic 30.0%
!! TTTTGATTGTGTTGTTGATC+AGG - chr4_3:51437014-51437033 Msa0645960:intron 30.0%
! TTTGATTGTGTTGTTGATCA+GGG - chr4_3:51437015-51437034 Msa0645960:intron 30.0%
AAAACATGAAATTCCACCAA+TGG + chr4_3:51437135-51437154 None:intergenic 30.0%
!! GGAATTTCATGTTTTGTTCA+TGG - chr4_3:51437140-51437159 Msa0645960:CDS 30.0%
!!! TGTTCATGTTTTAGTGCTTT+TGG - chr4_3:51437245-51437264 Msa0645960:intron 30.0%
TCATATTTCCCTTATGTTAG+GGG + chr4_3:51437478-51437497 None:intergenic 30.0%
!! AGTTCTAAGATTAGAAACAG+TGG + chr4_3:51435328-51435347 None:intergenic 30.0%
TTGTCTCCTAATTGTTATCA+TGG - chr4_3:51435441-51435460 Msa0645960:three_prime_UTR 30.0%
CAACATCCATGATAACAATT+AGG + chr4_3:51435450-51435469 None:intergenic 30.0%
! TATGCTTGAATCCAACATTT+TGG - chr4_3:51435519-51435538 Msa0645960:three_prime_UTR 30.0%
AAAACAGGTTAAGCATTTGA+AGG - chr4_3:51435633-51435652 Msa0645960:CDS 30.0%
!!! CATGTTTTAGCCAATTTGTT+AGG - chr4_3:51435736-51435755 Msa0645960:CDS 30.0%
!!! TACTTTGCCTTATTTTAACC+TGG - chr4_3:51435824-51435843 Msa0645960:CDS 30.0%
! ATTTTGTCCCCTGTAATTTT+AGG - chr4_3:51436046-51436065 Msa0645960:intron 30.0%
! ACCGATTTCCTAAAATTACA+GGG + chr4_3:51436057-51436076 None:intergenic 30.0%
! AACCGATTTCCTAAAATTAC+AGG + chr4_3:51436058-51436077 None:intergenic 30.0%
ACTCTACAAAATCGATGATA+TGG + chr4_3:51436150-51436169 None:intergenic 30.0%
CCAAAAAGAAAATTTACAGG+GGG - chr4_3:51436222-51436241 Msa0645960:intron 30.0%
TGGAAATGACGTATATTACA+GGG - chr4_3:51436250-51436269 Msa0645960:intron 30.0%
AATTTGGAGAAAATTGGGAT+GGG + chr4_3:51436371-51436390 None:intergenic 30.0%
AAATTTGGAGAAAATTGGGA+TGG + chr4_3:51436372-51436391 None:intergenic 30.0%
ATGTCATCTCAACGTAAATT+TGG + chr4_3:51436387-51436406 None:intergenic 30.0%
GTATTAAAGAATAGCCACAT+TGG + chr4_3:51436441-51436460 None:intergenic 30.0%
! TGTCACTTCAGTGAAAAATT+TGG - chr4_3:51436618-51436637 Msa0645960:intron 30.0%
TTGCACAATCATGATACTTA+AGG - chr4_3:51436651-51436670 Msa0645960:intron 30.0%
!!! CAATTAGGCCATTTTAATTC+GGG - chr4_3:51436683-51436702 Msa0645960:intron 30.0%
!!! ACCATAGTTTTATTCGGAAA+CGG - chr4_3:51436819-51436838 Msa0645960:intron 30.0%
GATCAACAACACAATCAAAA+GGG + chr4_3:51437014-51437033 None:intergenic 30.0%
TGATCAACAACACAATCAAA+AGG + chr4_3:51437015-51437034 None:intergenic 30.0%
!! TTTTGATTGTGTTGTTGATC+AGG - chr4_3:51437014-51437033 Msa0645960:intron 30.0%
! TTTGATTGTGTTGTTGATCA+GGG - chr4_3:51437015-51437034 Msa0645960:intron 30.0%
AAAACATGAAATTCCACCAA+TGG + chr4_3:51437135-51437154 None:intergenic 30.0%
!! GGAATTTCATGTTTTGTTCA+TGG - chr4_3:51437140-51437159 Msa0645960:CDS 30.0%
!!! TGTTCATGTTTTAGTGCTTT+TGG - chr4_3:51437245-51437264 Msa0645960:intron 30.0%
TCATATTTCCCTTATGTTAG+GGG + chr4_3:51437478-51437497 None:intergenic 30.0%
! GATTTTCTTTCTGTTCTAGC+TGG + chr4_3:51435367-51435386 None:intergenic 35.0%
CAATACAATATGGCTAGAGT+AGG - chr4_3:51435406-51435425 Msa0645960:three_prime_UTR 35.0%
!!! GTTTTAGCCAATTTGTTAGG+TGG - chr4_3:51435739-51435758 Msa0645960:CDS 35.0%
ATTGCAACCACCTAACAAAT+TGG + chr4_3:51435749-51435768 None:intergenic 35.0%
CAATTGTGTTTGTTCTCAAC+AGG - chr4_3:51435765-51435784 Msa0645960:CDS 35.0%
TTCTCAACAGGAATTTGAGA+AGG - chr4_3:51435777-51435796 Msa0645960:CDS 35.0%
!! AAGTACTGAGAGTTGTCTAT+GGG + chr4_3:51435809-51435828 None:intergenic 35.0%
!! AAAGTACTGAGAGTTGTCTA+TGG + chr4_3:51435810-51435829 None:intergenic 35.0%
! TTGTTATTCCAAAACAGGAC+AGG + chr4_3:51435868-51435887 None:intergenic 35.0%
!!! GTGTTTTAGCCCTGTAATAA+AGG - chr4_3:51435936-51435955 Msa0645960:intron 35.0%
CGGAAATGACCTTTATTACA+GGG + chr4_3:51435948-51435967 None:intergenic 35.0%
CCTGTAATAAAGGTCATTTC+CGG - chr4_3:51435946-51435965 Msa0645960:intron 35.0%
! GGGGACAAAATTTTTCATGA+AGG + chr4_3:51436037-51436056 None:intergenic 35.0%
CCGATTTCCTAAAATTACAG+GGG + chr4_3:51436056-51436075 None:intergenic 35.0%
!! CCCCTGTAATTTTAGGAAAT+CGG - chr4_3:51436053-51436072 Msa0645960:intron 35.0%
! CGAAATTTGCTCAAATTGCA+GGG + chr4_3:51436086-51436105 None:intergenic 35.0%
CCTGCAATTTGAGCAAATTT+CGG - chr4_3:51436084-51436103 Msa0645960:intron 35.0%
ACAAAATCGATGATATGGCA+GGG + chr4_3:51436145-51436164 None:intergenic 35.0%
TACAAAATCGATGATATGGC+AGG + chr4_3:51436146-51436165 None:intergenic 35.0%
! CCCCCTGTAAATTTTCTTTT+TGG + chr4_3:51436225-51436244 None:intergenic 35.0%
AAAATTTACAGGGGGAAAAC+TGG - chr4_3:51436230-51436249 Msa0645960:intron 35.0%
CTGGAAATGACGTATATTAC+AGG - chr4_3:51436249-51436268 Msa0645960:intron 35.0%
GGAAATGACGTATATTACAG+GGG - chr4_3:51436251-51436270 Msa0645960:intron 35.0%
ATTTGGAGAAAATTGGGATG+GGG + chr4_3:51436370-51436389 None:intergenic 35.0%
CACTTCAGTGAAAAATTTGG+AGG - chr4_3:51436621-51436640 Msa0645960:intron 35.0%
TCGATTCACCCGAATTAAAA+TGG + chr4_3:51436694-51436713 None:intergenic 35.0%
TCCGTTTCCGAATAAAACTA+TGG + chr4_3:51436823-51436842 None:intergenic 35.0%
TATGTCAAACAACAGGTCAA+AGG - chr4_3:51437078-51437097 Msa0645960:CDS 35.0%
GAGCATATTTCCCTAAACAT+GGG + chr4_3:51437448-51437467 None:intergenic 35.0%
AGAGCATATTTCCCTAAACA+TGG + chr4_3:51437449-51437468 None:intergenic 35.0%
CATATTTCCCTTATGTTAGG+GGG + chr4_3:51437477-51437496 None:intergenic 35.0%
TTCTCAACAAGTTGCGATTA+TGG - chr4_3:51437515-51437534 Msa0645960:five_prime_UTR 35.0%
! GATTTTCTTTCTGTTCTAGC+TGG + chr4_3:51435367-51435386 None:intergenic 35.0%
CAATACAATATGGCTAGAGT+AGG - chr4_3:51435406-51435425 Msa0645960:three_prime_UTR 35.0%
!!! GTTTTAGCCAATTTGTTAGG+TGG - chr4_3:51435739-51435758 Msa0645960:CDS 35.0%
ATTGCAACCACCTAACAAAT+TGG + chr4_3:51435749-51435768 None:intergenic 35.0%
CAATTGTGTTTGTTCTCAAC+AGG - chr4_3:51435765-51435784 Msa0645960:CDS 35.0%
TTCTCAACAGGAATTTGAGA+AGG - chr4_3:51435777-51435796 Msa0645960:CDS 35.0%
!! AAGTACTGAGAGTTGTCTAT+GGG + chr4_3:51435809-51435828 None:intergenic 35.0%
!! AAAGTACTGAGAGTTGTCTA+TGG + chr4_3:51435810-51435829 None:intergenic 35.0%
! TTGTTATTCCAAAACAGGAC+AGG + chr4_3:51435868-51435887 None:intergenic 35.0%
!!! GTGTTTTAGCCCTGTAATAA+AGG - chr4_3:51435936-51435955 Msa0645960:intron 35.0%
CGGAAATGACCTTTATTACA+GGG + chr4_3:51435948-51435967 None:intergenic 35.0%
CCTGTAATAAAGGTCATTTC+CGG - chr4_3:51435946-51435965 Msa0645960:intron 35.0%
! GGGGACAAAATTTTTCATGA+AGG + chr4_3:51436037-51436056 None:intergenic 35.0%
CCGATTTCCTAAAATTACAG+GGG + chr4_3:51436056-51436075 None:intergenic 35.0%
!! CCCCTGTAATTTTAGGAAAT+CGG - chr4_3:51436053-51436072 Msa0645960:intron 35.0%
! CGAAATTTGCTCAAATTGCA+GGG + chr4_3:51436086-51436105 None:intergenic 35.0%
CCTGCAATTTGAGCAAATTT+CGG - chr4_3:51436084-51436103 Msa0645960:intron 35.0%
ACAAAATCGATGATATGGCA+GGG + chr4_3:51436145-51436164 None:intergenic 35.0%
TACAAAATCGATGATATGGC+AGG + chr4_3:51436146-51436165 None:intergenic 35.0%
! CCCCCTGTAAATTTTCTTTT+TGG + chr4_3:51436225-51436244 None:intergenic 35.0%
AAAATTTACAGGGGGAAAAC+TGG - chr4_3:51436230-51436249 Msa0645960:intron 35.0%
CTGGAAATGACGTATATTAC+AGG - chr4_3:51436249-51436268 Msa0645960:intron 35.0%
GGAAATGACGTATATTACAG+GGG - chr4_3:51436251-51436270 Msa0645960:intron 35.0%
ATTTGGAGAAAATTGGGATG+GGG + chr4_3:51436370-51436389 None:intergenic 35.0%
CACTTCAGTGAAAAATTTGG+AGG - chr4_3:51436621-51436640 Msa0645960:intron 35.0%
TCGATTCACCCGAATTAAAA+TGG + chr4_3:51436694-51436713 None:intergenic 35.0%
TCCGTTTCCGAATAAAACTA+TGG + chr4_3:51436823-51436842 None:intergenic 35.0%
TATGTCAAACAACAGGTCAA+AGG - chr4_3:51437078-51437097 Msa0645960:CDS 35.0%
GAGCATATTTCCCTAAACAT+GGG + chr4_3:51437448-51437467 None:intergenic 35.0%
AGAGCATATTTCCCTAAACA+TGG + chr4_3:51437449-51437468 None:intergenic 35.0%
CATATTTCCCTTATGTTAGG+GGG + chr4_3:51437477-51437496 None:intergenic 35.0%
TTCTCAACAAGTTGCGATTA+TGG - chr4_3:51437515-51437534 Msa0645960:five_prime_UTR 35.0%
TACAATATGGCTAGAGTAGG+AGG - chr4_3:51435409-51435428 Msa0645960:three_prime_UTR 40.0%
GGCTGAAATAGCACAAAACA+AGG - chr4_3:51435492-51435511 Msa0645960:three_prime_UTR 40.0%
AGGTTAAGCATTTGAAGGTG+TGG - chr4_3:51435638-51435657 Msa0645960:CDS 40.0%
!! AACATGAAGGCATCATGACT+TGG + chr4_3:51435682-51435701 None:intergenic 40.0%
AAGTCATGATGCCTTCATGT+TGG - chr4_3:51435681-51435700 Msa0645960:CDS 40.0%
AGTCATGATGCCTTCATGTT+GGG - chr4_3:51435682-51435701 Msa0645960:CDS 40.0%
AGAGGCAGAGATATATTACC+AGG + chr4_3:51435845-51435864 None:intergenic 40.0%
CCGGAAATGACCTTTATTAC+AGG + chr4_3:51435949-51435968 None:intergenic 40.0%
! AATTTGCTCAAATTGCAGGG+AGG + chr4_3:51436083-51436102 None:intergenic 40.0%
! CCGAAATTTGCTCAAATTGC+AGG + chr4_3:51436087-51436106 None:intergenic 40.0%
CAAAATCGATGATATGGCAG+GGG + chr4_3:51436144-51436163 None:intergenic 40.0%
! ATGGGGACTAGAAAGCATAA+GGG + chr4_3:51436353-51436372 None:intergenic 40.0%
AACAGGTCAAAGGATTCTTG+TGG - chr4_3:51437088-51437107 Msa0645960:CDS 40.0%
ATACTAATCCATGGAAGCAG+TGG + chr4_3:51437195-51437214 None:intergenic 40.0%
GCAAAAGAGACCCATGTTTA+GGG - chr4_3:51437435-51437454 Msa0645960:CDS 40.0%
! TCTTTTGACCCCCTAACATA+AGG - chr4_3:51437466-51437485 Msa0645960:exon 40.0%
! CTTTTGACCCCCTAACATAA+GGG - chr4_3:51437467-51437486 Msa0645960:five_prime_UTR 40.0%
!! CGCAACTTGTTGAGAAGATA+AGG + chr4_3:51437511-51437530 None:intergenic 40.0%
TACAATATGGCTAGAGTAGG+AGG - chr4_3:51435409-51435428 Msa0645960:three_prime_UTR 40.0%
GGCTGAAATAGCACAAAACA+AGG - chr4_3:51435492-51435511 Msa0645960:three_prime_UTR 40.0%
AGGTTAAGCATTTGAAGGTG+TGG - chr4_3:51435638-51435657 Msa0645960:CDS 40.0%
!! AACATGAAGGCATCATGACT+TGG + chr4_3:51435682-51435701 None:intergenic 40.0%
AAGTCATGATGCCTTCATGT+TGG - chr4_3:51435681-51435700 Msa0645960:CDS 40.0%
AGTCATGATGCCTTCATGTT+GGG - chr4_3:51435682-51435701 Msa0645960:CDS 40.0%
AGAGGCAGAGATATATTACC+AGG + chr4_3:51435845-51435864 None:intergenic 40.0%
CCGGAAATGACCTTTATTAC+AGG + chr4_3:51435949-51435968 None:intergenic 40.0%
! AATTTGCTCAAATTGCAGGG+AGG + chr4_3:51436083-51436102 None:intergenic 40.0%
! CCGAAATTTGCTCAAATTGC+AGG + chr4_3:51436087-51436106 None:intergenic 40.0%
CAAAATCGATGATATGGCAG+GGG + chr4_3:51436144-51436163 None:intergenic 40.0%
! ATGGGGACTAGAAAGCATAA+GGG + chr4_3:51436353-51436372 None:intergenic 40.0%
AACAGGTCAAAGGATTCTTG+TGG - chr4_3:51437088-51437107 Msa0645960:CDS 40.0%
ATACTAATCCATGGAAGCAG+TGG + chr4_3:51437195-51437214 None:intergenic 40.0%
GCAAAAGAGACCCATGTTTA+GGG - chr4_3:51437435-51437454 Msa0645960:CDS 40.0%
! TCTTTTGACCCCCTAACATA+AGG - chr4_3:51437466-51437485 Msa0645960:exon 40.0%
! CTTTTGACCCCCTAACATAA+GGG - chr4_3:51437467-51437486 Msa0645960:five_prime_UTR 40.0%
!! CGCAACTTGTTGAGAAGATA+AGG + chr4_3:51437511-51437530 None:intergenic 40.0%
GTTATCATGGATGTTGCAGC+TGG - chr4_3:51435454-51435473 Msa0645960:three_prime_UTR 45.0%
GATGTTGCAGCTGGTATTCT+TGG - chr4_3:51435463-51435482 Msa0645960:three_prime_UTR 45.0%
!! AGCTGGTATTCTTGGCTTTG+AGG - chr4_3:51435471-51435490 Msa0645960:three_prime_UTR 45.0%
GTCATGATGCCTTCATGTTG+GGG - chr4_3:51435683-51435702 Msa0645960:CDS 45.0%
TACTGAGAGTTGTCTATGGG+AGG + chr4_3:51435806-51435825 None:intergenic 45.0%
ATTCCAAAACAGGACAGGAG+AGG + chr4_3:51435863-51435882 None:intergenic 45.0%
! TGGGGACTAGAAAGCATAAG+GGG + chr4_3:51436352-51436371 None:intergenic 45.0%
! GATGGGGACTAGAAAGCATA+AGG + chr4_3:51436354-51436373 None:intergenic 45.0%
GTTGTTGATCAGGGTTGTAG+TGG - chr4_3:51437024-51437043 Msa0645960:intron 45.0%
GATTGTCCATGCTGGTGATA+GGG - chr4_3:51437053-51437072 Msa0645960:CDS 45.0%
ATTGTCCATGCTGGTGATAG+GGG - chr4_3:51437054-51437073 Msa0645960:CDS 45.0%
TAGGGGCTATGTCAAACAAC+AGG - chr4_3:51437071-51437090 Msa0645960:CDS 45.0%
CACCATCACTTTCTGTCCAT+TGG - chr4_3:51437116-51437135 Msa0645960:CDS 45.0%
CACCAATGGACAGAAAGTGA+TGG + chr4_3:51437121-51437140 None:intergenic 45.0%
CATCACTTTCTGTCCATTGG+TGG - chr4_3:51437119-51437138 Msa0645960:CDS 45.0%
CATTGTTACCACTGCTTCCA+TGG - chr4_3:51437184-51437203 Msa0645960:CDS 45.0%
GGCAAAAGAGACCCATGTTT+AGG - chr4_3:51437434-51437453 Msa0645960:CDS 45.0%
GTTATCATGGATGTTGCAGC+TGG - chr4_3:51435454-51435473 Msa0645960:three_prime_UTR 45.0%
GATGTTGCAGCTGGTATTCT+TGG - chr4_3:51435463-51435482 Msa0645960:three_prime_UTR 45.0%
!! AGCTGGTATTCTTGGCTTTG+AGG - chr4_3:51435471-51435490 Msa0645960:three_prime_UTR 45.0%
GTCATGATGCCTTCATGTTG+GGG - chr4_3:51435683-51435702 Msa0645960:CDS 45.0%
TACTGAGAGTTGTCTATGGG+AGG + chr4_3:51435806-51435825 None:intergenic 45.0%
ATTCCAAAACAGGACAGGAG+AGG + chr4_3:51435863-51435882 None:intergenic 45.0%
! TGGGGACTAGAAAGCATAAG+GGG + chr4_3:51436352-51436371 None:intergenic 45.0%
! GATGGGGACTAGAAAGCATA+AGG + chr4_3:51436354-51436373 None:intergenic 45.0%
GTTGTTGATCAGGGTTGTAG+TGG - chr4_3:51437024-51437043 Msa0645960:intron 45.0%
GATTGTCCATGCTGGTGATA+GGG - chr4_3:51437053-51437072 Msa0645960:CDS 45.0%
ATTGTCCATGCTGGTGATAG+GGG - chr4_3:51437054-51437073 Msa0645960:CDS 45.0%
TAGGGGCTATGTCAAACAAC+AGG - chr4_3:51437071-51437090 Msa0645960:CDS 45.0%
CACCATCACTTTCTGTCCAT+TGG - chr4_3:51437116-51437135 Msa0645960:CDS 45.0%
CACCAATGGACAGAAAGTGA+TGG + chr4_3:51437121-51437140 None:intergenic 45.0%
CATCACTTTCTGTCCATTGG+TGG - chr4_3:51437119-51437138 Msa0645960:CDS 45.0%
CATTGTTACCACTGCTTCCA+TGG - chr4_3:51437184-51437203 Msa0645960:CDS 45.0%
GGCAAAAGAGACCCATGTTT+AGG - chr4_3:51437434-51437453 Msa0645960:CDS 45.0%
TGATGCCTTCATGTTGGGGT+TGG - chr4_3:51435687-51435706 Msa0645960:CDS 50.0%
GATGCCTTCATGTTGGGGTT+GGG - chr4_3:51435688-51435707 Msa0645960:CDS 50.0%
! TTGGGTGCAGCAGTGCTATT+GGG - chr4_3:51435706-51435725 Msa0645960:CDS 50.0%
CCACATTGGCCAAGAGAGTT+GGG + chr4_3:51436427-51436446 None:intergenic 50.0%
ATCAGGGTTGTAGTGGCTGT+TGG - chr4_3:51437031-51437050 Msa0645960:intron 50.0%
GGATTGTCCATGCTGGTGAT+AGG - chr4_3:51437052-51437071 Msa0645960:CDS 50.0%
! TGCGATTATGGCCCCTGTTT+TGG - chr4_3:51437527-51437546 Msa0645960:five_prime_UTR 50.0%
! GCGATTATGGCCCCTGTTTT+GGG - chr4_3:51437528-51437547 Msa0645960:five_prime_UTR 50.0%
TGATGCCTTCATGTTGGGGT+TGG - chr4_3:51435687-51435706 Msa0645960:CDS 50.0%
GATGCCTTCATGTTGGGGTT+GGG - chr4_3:51435688-51435707 Msa0645960:CDS 50.0%
! TTGGGTGCAGCAGTGCTATT+GGG - chr4_3:51435706-51435725 Msa0645960:CDS 50.0%
CCACATTGGCCAAGAGAGTT+GGG + chr4_3:51436427-51436446 None:intergenic 50.0%
ATCAGGGTTGTAGTGGCTGT+TGG - chr4_3:51437031-51437050 Msa0645960:intron 50.0%
GGATTGTCCATGCTGGTGAT+AGG - chr4_3:51437052-51437071 Msa0645960:CDS 50.0%
! TGCGATTATGGCCCCTGTTT+TGG - chr4_3:51437527-51437546 Msa0645960:five_prime_UTR 50.0%
! GCGATTATGGCCCCTGTTTT+GGG - chr4_3:51437528-51437547 Msa0645960:five_prime_UTR 50.0%
TGCACCCAACCCCAACATGA+AGG + chr4_3:51435695-51435714 None:intergenic 55.0%
GTTGGGTGCAGCAGTGCTAT+TGG - chr4_3:51435705-51435724 Msa0645960:CDS 55.0%
! CTGCCTCTCCTGTCCTGTTT+TGG - chr4_3:51435857-51435876 Msa0645960:intron 55.0%
GCCAAGAGAGTTGGGAGTCA+CGG + chr4_3:51436419-51436438 None:intergenic 55.0%
CCCAACTCTCTTGGCCAATG+TGG - chr4_3:51436424-51436443 Msa0645960:intron 55.0%
GCCACATTGGCCAAGAGAGT+TGG + chr4_3:51436428-51436447 None:intergenic 55.0%
GGCTGTTGGATTGTCCATGC+TGG - chr4_3:51437045-51437064 Msa0645960:CDS 55.0%
CATAGCCCCTATCACCAGCA+TGG + chr4_3:51437062-51437081 None:intergenic 55.0%
TGCACCCAACCCCAACATGA+AGG + chr4_3:51435695-51435714 None:intergenic 55.0%
GTTGGGTGCAGCAGTGCTAT+TGG - chr4_3:51435705-51435724 Msa0645960:CDS 55.0%
! CTGCCTCTCCTGTCCTGTTT+TGG - chr4_3:51435857-51435876 Msa0645960:intron 55.0%
GCCAAGAGAGTTGGGAGTCA+CGG + chr4_3:51436419-51436438 None:intergenic 55.0%
CCCAACTCTCTTGGCCAATG+TGG - chr4_3:51436424-51436443 Msa0645960:intron 55.0%
GCCACATTGGCCAAGAGAGT+TGG + chr4_3:51436428-51436447 None:intergenic 55.0%
GGCTGTTGGATTGTCCATGC+TGG - chr4_3:51437045-51437064 Msa0645960:CDS 55.0%
CATAGCCCCTATCACCAGCA+TGG + chr4_3:51437062-51437081 None:intergenic 55.0%
GCCGTGACTCCCAACTCTCT+TGG - chr4_3:51436415-51436434 Msa0645960:intron 60.0%
GCCGTGACTCCCAACTCTCT+TGG - chr4_3:51436415-51436434 Msa0645960:intron 60.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 51435324 51437557 51435324 ID=Msa0645960;Name=Msa0645960
chr4_3 mRNA 51435324 51437557 51435324 ID=Msa0645960-mRNA-1;Parent=Msa0645960;Name=Msa0645960-mRNA-1;_AED=0.07;_eAED=0.07;_QI=91|1|1|1|1|1|3|299|175
chr4_3 exon 51435324 51435845 51435324 ID=Msa0645960-mRNA-1:exon:12481;Parent=Msa0645960-mRNA-1
chr4_3 exon 51437036 51437241 51437036 ID=Msa0645960-mRNA-1:exon:12480;Parent=Msa0645960-mRNA-1
chr4_3 exon 51437368 51437557 51437368 ID=Msa0645960-mRNA-1:exon:12479;Parent=Msa0645960-mRNA-1
chr4_3 five_prime_UTR 51437467 51437557 51437467 ID=Msa0645960-mRNA-1:five_prime_utr;Parent=Msa0645960-mRNA-1
chr4_3 CDS 51437368 51437466 51437368 ID=Msa0645960-mRNA-1:cds;Parent=Msa0645960-mRNA-1
chr4_3 CDS 51437036 51437241 51437036 ID=Msa0645960-mRNA-1:cds;Parent=Msa0645960-mRNA-1
chr4_3 CDS 51435623 51435845 51435623 ID=Msa0645960-mRNA-1:cds;Parent=Msa0645960-mRNA-1
chr4_3 three_prime_UTR 51435324 51435622 51435324 ID=Msa0645960-mRNA-1:three_prime_utr;Parent=Msa0645960-mRNA-1
Gene Sequence

>Msa0645960

ATGGCTAGAGTAGGAGGCATTGTTGTTTGTCTCCTAATTGTTATCATGGATGTTGCAGCTGGTATTCTTGGCTTTGAGGCTGAAATAGCACAAAACAAGGTTAAGCATTTGAAGGTGTGGATATTTGAGTGTAGAGAACCAAGTCATGATGCCTTCATGTTGGGGTTGGGTGCAGCAGTGCTATTGGGACTATCACATGTTTTAGCCAATTTGTTAGGTGGTTGCAATTGTGTTTGTTCTCAACAGGAATTTGAGAAGGCTTCCTCCCATAGACAACTCTCAGTACTTTGCCTTATTTTAACCTGGGTTGTAGTGGCTGTTGGATTGTCCATGCTGGTGATAGGGGCTATGTCAAACAACAGGTCAAAGGATTCTTGTGGTTTCACACCATCACTTTCTGTCCATTGGTGGAATTTCATGTTTTGTTCATGGTCTCTTCTCTGTTATATATTACATTGTTACCACTGCTTCCATGGATTAGTATTTTGTAAGATGATAACAACTAGAATTCACTTGTTCATGTTTTAG
Protein sequence

>Msa0645960

MARVGGIVVCLLIVIMDVAAGILGFEAEIAQNKVKHLKVWIFECREPSHDAFMLGLGAAVLLGLSHVLANLLGGCNCVCSQQEFEKASSHRQLSVLCLILTWVVVAVGLSMLVIGAMSNNRSKDSCGFTPSLSVHWWNFMFCSWSLLCYILHCYHCFHGLVFCKMITTRIHLFMF*