AlfalfaGEDB | Msa0098040

M. sativa cultivar zhongmu-4 / Msa0098040

KEGG: K16670
GO: GO:0001708 GO:0003002 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009888 GO:0009889 GO:0009987 GO:0010051 GO:0010087 GO:0010089 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045165 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03790.16

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0098040	sp\|Q41330\|KN1_SOLLC	73.433	335	60	8	68	395	42	354	2.86e-164	467

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0098040	X2D315	93.955	397	5	4	1	396	1	379	0.0	759

TFs/TRs:

Gene ID	Type	Classification
Msa0098040	TF	HB-KNOX

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000050	Msa0098040	0.874919	4.634969e-68	-8.615850e-47
Msa0001940	Msa0098040	0.869053	4.128067e-66	-8.615850e-47
Msa0001960	Msa0098040	0.819309	1.242935e-52	-8.615850e-47
Msa0002580	Msa0098040	0.863204	2.941458e-64	-8.615850e-47
Msa0005890	Msa0098040	0.819501	1.123458e-52	-8.615850e-47
Msa0017670	Msa0098040	0.969784	1.238093e-130	-8.615850e-47
Msa0017930	Msa0098040	0.857419	1.653769e-62	-8.615850e-47
Msa0017950	Msa0098040	0.870275	1.650785e-66	-8.615850e-47
Msa0019900	Msa0098040	0.811470	6.890630e-51	-8.615850e-47
Msa0024550	Msa0098040	0.831871	1.305544e-55	-8.615850e-47
Msa0025160	Msa0098040	0.818647	1.757731e-52	-8.615850e-47
Msa0027280	Msa0098040	0.803969	2.704845e-49	-8.615850e-47
Msa0027820	Msa0098040	0.831261	1.845048e-55	-8.615850e-47
Msa0030700	Msa0098040	0.821675	3.558590e-53	-8.615850e-47
Msa0032460	Msa0098040	0.835603	1.524463e-56	-8.615850e-47
Msa0035060	Msa0098040	0.824730	6.890108e-54	-8.615850e-47
Msa0035270	Msa0098040	0.803659	3.136431e-49	-8.615850e-47
Msa0035340	Msa0098040	0.832663	8.313523e-56	-8.615850e-47
Msa0038290	Msa0098040	-0.813061	3.097074e-51	-8.615850e-47
Msa0042640	Msa0098040	0.856645	2.795907e-62	-8.615850e-47
Msa0048510	Msa0098040	0.806479	8.063734e-50	-8.615850e-47
Msa0050660	Msa0098040	0.831267	1.839001e-55	-8.615850e-47
Msa0050700	Msa0098040	0.833291	5.804031e-56	-8.615850e-47
Msa0050790	Msa0098040	0.842595	2.349035e-58	-8.615850e-47
Msa0054690	Msa0098040	0.830565	2.733214e-55	-8.615850e-47
Msa0067330	Msa0098040	0.817344	3.461619e-52	-8.615850e-47
Msa0077340	Msa0098040	0.872955	2.136418e-67	-8.615850e-47
Msa0077560	Msa0098040	0.827205	1.779333e-54	-8.615850e-47
Msa0078120	Msa0098040	0.806641	7.452805e-50	-8.615850e-47
Msa0080580	Msa0098040	0.824775	6.724084e-54	-8.615850e-47
Msa0081020	Msa0098040	0.801603	8.330926e-49	-8.615850e-47
Msa0081390	Msa0098040	0.836902	7.126978e-57	-8.615850e-47
Msa0081450	Msa0098040	0.830402	2.996263e-55	-8.615850e-47
Msa0081980	Msa0098040	0.813135	2.983027e-51	-8.615850e-47
Msa0082020	Msa0098040	0.805328	1.407901e-49	-8.615850e-47
Msa0094780	Msa0098040	0.831650	1.479775e-55	-8.615850e-47
Msa0098040	Msa0108410	0.803874	2.830392e-49	-8.615850e-47
Msa0098040	Msa0120400	0.832134	1.124339e-55	-8.615850e-47
Msa0098040	Msa0123070	0.805794	1.123878e-49	-8.615850e-47
Msa0098040	Msa0123340	0.826782	2.245993e-54	-8.615850e-47
Msa0098040	Msa0125360	0.845741	3.361712e-59	-8.615850e-47
Msa0098040	Msa0128460	0.819600	1.066516e-52	-8.615850e-47
Msa0098040	Msa0131900	0.809099	2.237168e-50	-8.615850e-47
Msa0098040	Msa0136650	0.811527	6.697418e-51	-8.615850e-47
Msa0098040	Msa0140130	0.830152	3.449148e-55	-8.615850e-47
Msa0098040	Msa0140280	0.845625	3.614673e-59	-8.615850e-47
Msa0098040	Msa0146650	0.807776	4.284617e-50	-8.615850e-47
Msa0098040	Msa0158860	0.821727	3.461717e-53	-8.615850e-47
Msa0098040	Msa0164330	0.821412	4.094378e-53	-8.615850e-47
Msa0098040	Msa0173290	0.816398	5.646378e-52	-8.615850e-47
Msa0098040	Msa0173690	0.844921	5.602275e-59	-8.615850e-47
Msa0098040	Msa0174290	0.807541	4.807660e-50	-8.615850e-47
Msa0098040	Msa0174450	0.821402	4.115721e-53	-8.615850e-47
Msa0098040	Msa0175750	0.817789	2.748756e-52	-8.615850e-47
Msa0098040	Msa0176060	0.803403	3.544552e-49	-8.615850e-47
Msa0098040	Msa0184500	0.804102	2.538257e-49	-8.615850e-47
Msa0098040	Msa0186010	0.860330	2.226777e-63	-8.615850e-47
Msa0098040	Msa0188610	0.804521	2.075957e-49	-8.615850e-47
Msa0098040	Msa0190570	0.805235	1.472241e-49	-8.615850e-47
Msa0098040	Msa0197100	0.821304	4.336359e-53	-8.615850e-47
Msa0098040	Msa0220920	0.807773	4.291723e-50	-8.615850e-47
Msa0098040	Msa0221000	0.849192	3.787288e-60	-8.615850e-47
Msa0098040	Msa0225100	0.866509	2.706918e-65	-8.615850e-47
Msa0098040	Msa0225860	0.839323	1.697040e-57	-8.615850e-47
Msa0098040	Msa0230780	0.830354	3.079035e-55	-8.615850e-47
Msa0098040	Msa0230800	0.826956	2.041168e-54	-8.615850e-47
Msa0098040	Msa0230840	0.832815	7.623338e-56	-8.615850e-47
Msa0098040	Msa0235290	0.820652	6.125229e-53	-8.615850e-47
Msa0098040	Msa0237420	0.802798	4.727956e-49	-8.615850e-47
Msa0098040	Msa0239030	0.823749	1.171213e-53	-8.615850e-47
Msa0098040	Msa0240900	0.836606	8.477401e-57	-8.615850e-47
Msa0098040	Msa0242590	0.801535	8.602092e-49	-8.615850e-47
Msa0098040	Msa0244640	0.874569	6.093870e-68	-8.615850e-47
Msa0098040	Msa0247890	0.803045	4.203573e-49	-8.615850e-47
Msa0098040	Msa0247940	0.801753	7.760046e-49	-8.615850e-47
Msa0098040	Msa0251710	0.826790	2.235735e-54	-8.615850e-47
Msa0098040	Msa0266180	0.867172	1.664130e-65	-8.615850e-47
Msa0098040	Msa0267110	0.801585	8.401757e-49	-8.615850e-47
Msa0098040	Msa0270280	0.803737	3.022605e-49	-8.615850e-47
Msa0098040	Msa0270340	0.824963	6.070375e-54	-8.615850e-47
Msa0098040	Msa0276740	0.837398	5.323275e-57	-8.615850e-47
Msa0098040	Msa0279690	0.806132	9.540194e-50	-8.615850e-47
Msa0098040	Msa0283330	0.855141	7.697230e-62	-8.615850e-47
Msa0098040	Msa0284800	0.814285	1.665618e-51	-8.615850e-47
Msa0098040	Msa0287740	0.867146	1.697292e-65	-8.615850e-47
Msa0098040	Msa0290720	0.813914	2.010952e-51	-8.615850e-47
Msa0098040	Msa0298410	0.821830	3.276429e-53	-8.615850e-47
Msa0098040	Msa0298470	0.841963	3.454301e-58	-8.615850e-47
Msa0098040	Msa0300240	0.812152	4.895074e-51	-8.615850e-47
Msa0098040	Msa0300270	0.811313	7.451173e-51	-8.615850e-47
Msa0098040	Msa0300320	0.817397	3.368655e-52	-8.615850e-47
Msa0098040	Msa0300680	0.838062	3.594032e-57	-8.615850e-47
Msa0098040	Msa0304680	0.801836	7.462083e-49	-8.615850e-47
Msa0098040	Msa0307270	0.827486	1.523863e-54	-8.615850e-47
Msa0098040	Msa0307670	0.969882	8.838259e-131	-8.615850e-47
Msa0098040	Msa0313900	0.810865	9.318261e-51	-8.615850e-47
Msa0098040	Msa0316680	0.817456	3.267504e-52	-8.615850e-47
Msa0098040	Msa0317970	0.809378	1.948987e-50	-8.615850e-47
Msa0098040	Msa0320500	0.830316	3.146237e-55	-8.615850e-47
Msa0098040	Msa0321620	0.868052	8.691919e-66	-8.615850e-47
Msa0098040	Msa0330380	0.804438	2.160571e-49	-8.615850e-47
Msa0098040	Msa0330520	0.861557	9.435823e-64	-8.615850e-47
Msa0098040	Msa0336110	0.813105	3.029106e-51	-8.615850e-47
Msa0098040	Msa0337580	0.829718	4.399565e-55	-8.615850e-47
Msa0098040	Msa0337700	0.843346	1.482505e-58	-8.615850e-47
Msa0098040	Msa0340500	0.834821	2.401615e-56	-8.615850e-47
Msa0098040	Msa0349210	0.835278	1.841162e-56	-8.615850e-47
Msa0098040	Msa0361910	0.821657	3.592610e-53	-8.615850e-47
Msa0098040	Msa0365210	0.827864	1.236429e-54	-8.615850e-47
Msa0098040	Msa0367690	0.869541	2.865573e-66	-8.615850e-47
Msa0098040	Msa0369790	0.845462	4.000908e-59	-8.615850e-47
Msa0098040	Msa0372300	0.831153	1.961646e-55	-8.615850e-47
Msa0098040	Msa0375640	0.801289	9.659845e-49	-8.615850e-47
Msa0098040	Msa0378720	0.836005	1.205690e-56	-8.615850e-47
Msa0098040	Msa0380620	0.806531	7.862612e-50	-8.615850e-47
Msa0098040	Msa0380670	0.840988	6.241059e-58	-8.615850e-47
Msa0098040	Msa0402070	-0.816954	4.237184e-52	-8.615850e-47
Msa0098040	Msa0408380	0.833198	6.122153e-56	-8.615850e-47
Msa0098040	Msa0412790	0.826154	3.168952e-54	-8.615850e-47
Msa0098040	Msa0415450	0.832480	9.229691e-56	-8.615850e-47
Msa0098040	Msa0419540	0.807429	5.076724e-50	-8.615850e-47
Msa0098040	Msa0424160	0.811161	8.041733e-51	-8.615850e-47
Msa0098040	Msa0428370	0.838603	2.607280e-57	-8.615850e-47
Msa0098040	Msa0428920	0.815040	1.133039e-51	-8.615850e-47
Msa0098040	Msa0430260	0.809316	2.009711e-50	-8.615850e-47
Msa0098040	Msa0430300	0.846382	2.250303e-59	-8.615850e-47
Msa0098040	Msa0432140	0.808934	2.426197e-50	-8.615850e-47
Msa0098040	Msa0436910	0.857478	1.588612e-62	-8.615850e-47
Msa0098040	Msa0453040	0.818732	1.680915e-52	-8.615850e-47
Msa0098040	Msa0457560	0.842232	2.932693e-58	-8.615850e-47
Msa0098040	Msa0457570	0.817134	3.860772e-52	-8.615850e-47
Msa0098040	Msa0460070	0.814976	1.170725e-51	-8.615850e-47
Msa0098040	Msa0464000	0.843186	1.635760e-58	-8.615850e-47
Msa0098040	Msa0465530	0.824387	8.299765e-54	-8.615850e-47
Msa0098040	Msa0472950	0.813694	2.248694e-51	-8.615850e-47
Msa0098040	Msa0474730	0.850350	1.797005e-60	-8.615850e-47
Msa0098040	Msa0476650	0.816187	6.292142e-52	-8.615850e-47
Msa0098040	Msa0481890	0.803846	2.868910e-49	-8.615850e-47
Msa0098040	Msa0483100	0.838016	3.693819e-57	-8.615850e-47
Msa0098040	Msa0491150	0.806013	1.010810e-49	-8.615850e-47
Msa0098040	Msa0509550	0.837942	3.859811e-57	-8.615850e-47
Msa0098040	Msa0513970	0.837327	5.550959e-57	-8.615850e-47
Msa0098040	Msa0517250	0.814021	1.904669e-51	-8.615850e-47
Msa0098040	Msa0519750	0.862764	4.022598e-64	-8.615850e-47
Msa0098040	Msa0519820	0.860256	2.344438e-63	-8.615850e-47
Msa0098040	Msa0519830	0.860419	2.093556e-63	-8.615850e-47
Msa0098040	Msa0520990	0.811999	5.285284e-51	-8.615850e-47
Msa0098040	Msa0528570	0.826636	2.433663e-54	-8.615850e-47
Msa0098040	Msa0529030	0.879523	1.162120e-69	-8.615850e-47
Msa0098040	Msa0530780	0.843590	1.276131e-58	-8.615850e-47
Msa0098040	Msa0534720	0.838823	2.287367e-57	-8.615850e-47
Msa0098040	Msa0541300	0.830757	2.453079e-55	-8.615850e-47
Msa0098040	Msa0541310	0.828070	1.103028e-54	-8.615850e-47
Msa0098040	Msa0543560	0.834667	2.625942e-56	-8.615850e-47
Msa0098040	Msa0548470	0.845962	2.927660e-59	-8.615850e-47
Msa0098040	Msa0550050	0.807018	6.204211e-50	-8.615850e-47
Msa0098040	Msa0557460	0.803893	2.805357e-49	-8.615850e-47
Msa0098040	Msa0565090	0.827427	1.574347e-54	-8.615850e-47
Msa0098040	Msa0567170	0.819758	9.817516e-53	-8.615850e-47
Msa0098040	Msa0570120	0.805548	1.265825e-49	-8.615850e-47
Msa0098040	Msa0571290	0.812599	3.909051e-51	-8.615850e-47
Msa0098040	Msa0574050	0.842648	2.274631e-58	-8.615850e-47
Msa0098040	Msa0576790	0.805807	1.116668e-49	-8.615850e-47
Msa0098040	Msa0580370	0.861535	9.580878e-64	-8.615850e-47
Msa0098040	Msa0581470	0.869471	3.020977e-66	-8.615850e-47
Msa0098040	Msa0583360	-0.851043	1.147210e-60	-8.615850e-47
Msa0098040	Msa0585020	0.834795	2.437867e-56	-8.615850e-47
Msa0098040	Msa0587620	0.838220	3.272027e-57	-8.615850e-47
Msa0098040	Msa0591170	0.805930	1.052425e-49	-8.615850e-47
Msa0098040	Msa0597270	0.853379	2.485033e-61	-8.615850e-47
Msa0098040	Msa0597790	0.829451	5.111487e-55	-8.615850e-47
Msa0098040	Msa0599420	0.828834	7.212854e-55	-8.615850e-47
Msa0098040	Msa0605560	0.823629	1.249660e-53	-8.615850e-47
Msa0098040	Msa0611210	0.861436	1.027716e-63	-8.615850e-47
Msa0098040	Msa0618070	0.803479	3.418456e-49	-8.615850e-47
Msa0098040	Msa0624420	0.838425	2.897946e-57	-8.615850e-47
Msa0098040	Msa0624900	0.848274	6.803310e-60	-8.615850e-47
Msa0098040	Msa0626450	0.810870	9.295332e-51	-8.615850e-47
Msa0098040	Msa0626490	0.804733	1.874942e-49	-8.615850e-47
Msa0098040	Msa0640110	0.800560	1.361336e-48	-8.615850e-47
Msa0098040	Msa0644410	0.835993	1.213775e-56	-8.615850e-47
Msa0098040	Msa0645960	0.806386	8.434189e-50	-8.615850e-47
Msa0098040	Msa0646510	0.804164	2.463019e-49	-8.615850e-47
Msa0098040	Msa0649200	0.803797	2.936009e-49	-8.615850e-47
Msa0098040	Msa0651550	0.853086	3.014843e-61	-8.615850e-47
Msa0098040	Msa0652770	0.840137	1.042166e-57	-8.615850e-47
Msa0098040	Msa0657720	0.815385	9.498907e-52	-8.615850e-47
Msa0098040	Msa0658640	0.830203	3.351547e-55	-8.615850e-47
Msa0098040	Msa0658880	0.816201	6.248007e-52	-8.615850e-47
Msa0098040	Msa0661150	0.813786	2.145449e-51	-8.615850e-47
Msa0098040	Msa0664600	0.808723	2.692094e-50	-8.615850e-47
Msa0098040	Msa0666700	0.810337	1.212132e-50	-8.615850e-47
Msa0098040	Msa0670100	0.827145	1.839330e-54	-8.615850e-47
Msa0098040	Msa0674480	0.858082	1.051705e-62	-8.615850e-47
Msa0098040	Msa0674560	0.825024	5.872894e-54	-8.615850e-47
Msa0098040	Msa0675330	0.838994	2.065798e-57	-8.615850e-47
Msa0098040	Msa0678380	0.806423	8.284416e-50	-8.615850e-47
Msa0098040	Msa0693330	0.801319	9.522170e-49	-8.615850e-47
Msa0098040	Msa0693890	0.809190	2.138223e-50	-8.615850e-47
Msa0098040	Msa0695270	0.816778	4.640589e-52	-8.615850e-47
Msa0098040	Msa0697160	0.801191	1.011687e-48	-8.615850e-47
Msa0098040	Msa0701590	0.803990	2.677068e-49	-8.615850e-47
Msa0098040	Msa0702720	0.824478	7.897159e-54	-8.615850e-47
Msa0098040	Msa0702790	0.812655	3.801548e-51	-8.615850e-47
Msa0098040	Msa0702810	0.800953	1.131317e-48	-8.615850e-47
Msa0098040	Msa0703600	0.801306	9.582345e-49	-8.615850e-47
Msa0098040	Msa0703950	0.819878	9.217629e-53	-8.615850e-47
Msa0098040	Msa0704410	0.822847	1.902982e-53	-8.615850e-47
Msa0098040	Msa0706230	0.816058	6.725117e-52	-8.615850e-47
Msa0098040	Msa0709200	0.801981	6.964852e-49	-8.615850e-47
Msa0098040	Msa0709440	0.809192	2.136119e-50	-8.615850e-47
Msa0098040	Msa0720410	0.820784	5.711590e-53	-8.615850e-47
Msa0098040	Msa0721080	0.811510	6.754918e-51	-8.615850e-47
Msa0098040	Msa0725770	0.821218	4.538473e-53	-8.615850e-47
Msa0098040	Msa0734250	0.818008	2.452328e-52	-8.615850e-47
Msa0098040	Msa0735780	0.834200	3.438780e-56	-8.615850e-47
Msa0098040	Msa0741220	0.817582	3.060642e-52	-8.615850e-47
Msa0098040	Msa0741650	0.802964	4.369092e-49	-8.615850e-47
Msa0098040	Msa0752450	0.838661	2.518929e-57	-8.615850e-47
Msa0098040	Msa0756490	0.818052	2.396468e-52	-8.615850e-47
Msa0098040	Msa0760970	0.811357	7.290791e-51	-8.615850e-47
Msa0098040	Msa0762910	0.854166	1.475106e-61	-8.615850e-47
Msa0098040	Msa0766350	0.802874	4.559496e-49	-8.615850e-47
Msa0098040	Msa0770330	0.839533	1.496712e-57	-8.615850e-47
Msa0098040	Msa0773630	0.803119	4.059466e-49	-8.615850e-47
Msa0098040	Msa0780570	0.838792	2.329977e-57	-8.615850e-47
Msa0098040	Msa0792370	0.966410	6.972562e-126	-8.615850e-47
Msa0098040	Msa0795750	0.852654	4.004744e-61	-8.615850e-47
Msa0098040	Msa0795870	0.855360	6.648355e-62	-8.615850e-47
Msa0098040	Msa0803250	0.820800	5.665136e-53	-8.615850e-47
Msa0098040	Msa0805330	0.863072	3.230326e-64	-8.615850e-47
Msa0098040	Msa0811690	0.800624	1.320486e-48	-8.615850e-47
Msa0098040	Msa0815970	0.809999	1.433617e-50	-8.615850e-47
Msa0098040	Msa0819170	0.806825	6.814790e-50	-8.615850e-47
Msa0098040	Msa0822730	0.829599	4.705090e-55	-8.615850e-47
Msa0098040	Msa0824450	0.802170	6.371087e-49	-8.615850e-47
Msa0098040	Msa0826310	0.816186	6.296470e-52	-8.615850e-47
Msa0098040	Msa0826950	0.818863	1.569885e-52	-8.615850e-47
Msa0098040	Msa0828950	0.812111	4.997792e-51	-8.615850e-47
Msa0098040	Msa0828970	0.807129	5.877452e-50	-8.615850e-47
Msa0098040	Msa0829300	0.865886	4.264659e-65	-8.615850e-47
Msa0098040	Msa0829330	0.877014	8.823779e-69	-8.615850e-47
Msa0098040	Msa0833530	0.862650	4.360302e-64	-8.615850e-47
Msa0098040	Msa0833650	0.860656	1.773497e-63	-8.615850e-47
Msa0098040	Msa0835490	0.837210	5.946387e-57	-8.615850e-47
Msa0098040	Msa0841590	0.800588	1.343442e-48	-8.615850e-47
Msa0098040	Msa0842680	0.854929	8.871796e-62	-8.615850e-47
Msa0098040	Msa0851850	0.821349	4.232895e-53	-8.615850e-47
Msa0098040	Msa0855870	0.818326	2.078570e-52	-8.615850e-47
Msa0098040	Msa0859290	0.812607	3.893952e-51	-8.615850e-47
Msa0098040	Msa0864940	0.808371	3.200702e-50	-8.615850e-47
Msa0098040	Msa0871880	0.803233	3.843946e-49	-8.615850e-47
Msa0098040	Msa0876310	0.804406	2.193082e-49	-8.615850e-47
Msa0098040	Msa0876930	0.817107	3.914601e-52	-8.615850e-47
Msa0098040	Msa0876940	0.803287	3.747156e-49	-8.615850e-47
Msa0098040	Msa0878280	0.806249	9.017631e-50	-8.615850e-47
Msa0098040	Msa0894790	0.851185	1.046353e-60	-8.615850e-47
Msa0098040	Msa0921590	0.837510	4.980643e-57	-8.615850e-47
Msa0098040	Msa0935820	0.800455	1.429991e-48	-8.615850e-47
Msa0098040	Msa0945190	0.846499	2.090164e-59	-8.615850e-47
Msa0098040	Msa0967380	0.831865	1.309743e-55	-8.615850e-47
Msa0098040	Msa0967870	0.855670	5.399272e-62	-8.615850e-47
Msa0098040	Msa0974520	0.808558	2.919332e-50	-8.615850e-47
Msa0098040	Msa0979180	0.806493	8.007559e-50	-8.615850e-47
Msa0098040	Msa0994720	0.805346	1.395315e-49	-8.615850e-47
Msa0098040	Msa1011530	0.834971	2.200835e-56	-8.615850e-47
Msa0098040	Msa1021590	0.849538	3.033440e-60	-8.615850e-47
Msa0098040	Msa1034600	0.814752	1.313075e-51	-8.615850e-47
Msa0098040	Msa1037540	0.812122	4.968470e-51	-8.615850e-47
Msa0098040	Msa1041710	0.800899	1.160785e-48	-8.615850e-47
Msa0098040	Msa1042160	0.832131	1.126326e-55	-8.615850e-47
Msa0098040	Msa1042190	0.833291	5.801383e-56	-8.615850e-47
Msa0098040	Msa1044680	0.859493	3.981294e-63	-8.615850e-47
Msa0098040	Msa1051900	0.844569	6.972523e-59	-8.615850e-47
Msa0098040	Msa1064370	0.823233	1.546393e-53	-8.615850e-47
Msa0098040	Msa1071180	-0.802980	4.336126e-49	-8.615850e-47
Msa0098040	Msa1072940	0.825369	4.866812e-54	-8.615850e-47
Msa0098040	Msa1074220	0.803811	2.917473e-49	-8.615850e-47
Msa0098040	Msa1074370	0.804875	1.750710e-49	-8.615850e-47
Msa0098040	Msa1077990	0.820806	5.646753e-53	-8.615850e-47
Msa0098040	Msa1078820	0.800262	1.565429e-48	-8.615850e-47
Msa0098040	Msa1084530	0.803780	2.960857e-49	-8.615850e-47
Msa0098040	Msa1087650	0.855675	5.381890e-62	-8.615850e-47
Msa0098040	Msa1089450	0.806642	7.448166e-50	-8.615850e-47
Msa0098040	Msa1096960	0.812694	3.726801e-51	-8.615850e-47
Msa0098040	Msa1101880	0.811397	7.145258e-51	-8.615850e-47
Msa0098040	Msa1105640	0.846038	2.791874e-59	-8.615850e-47
Msa0098040	Msa1111380	0.813933	1.991437e-51	-8.615850e-47
Msa0098040	Msa1123970	0.805449	1.327568e-49	-8.615850e-47
Msa0098040	Msa1125820	0.807384	5.189192e-50	-8.615850e-47
Msa0098040	Msa1125990	0.814978	1.169577e-51	-8.615850e-47
Msa0098040	Msa1132840	0.862020	6.807851e-64	-8.615850e-47
Msa0098040	Msa1140220	0.806391	8.414139e-50	-8.615850e-47
Msa0098040	Msa1145300	0.820766	5.767234e-53	-8.615850e-47
Msa0098040	Msa1145580	0.801740	7.808151e-49	-8.615850e-47
Msa0098040	Msa1148960	0.832166	1.104026e-55	-8.615850e-47
Msa0098040	Msa1155170	-0.845914	3.016952e-59	-8.615850e-47
Msa0098040	Msa1160920	0.834636	2.673284e-56	-8.615850e-47
Msa0098040	Msa1163100	0.812394	4.333707e-51	-8.615850e-47
Msa0098040	Msa1167470	0.819848	9.364423e-53	-8.615850e-47
Msa0098040	Msa1169650	0.800261	1.566184e-48	-8.615850e-47
Msa0098040	Msa1171290	0.806130	9.549933e-50	-8.615850e-47
Msa0098040	Msa1175990	0.803785	2.953036e-49	-8.615850e-47
Msa0098040	Msa1184120	0.803992	2.675397e-49	-8.615850e-47
Msa0098040	Msa1184890	0.802815	4.689248e-49	-8.615850e-47
Msa0098040	Msa1186020	0.845743	3.356581e-59	-8.615850e-47
Msa0098040	Msa1190180	0.804114	2.522708e-49	-8.615850e-47
Msa0098040	Msa1192570	0.800579	1.349134e-48	-8.615850e-47
Msa0098040	Msa1200890	0.822366	2.461582e-53	-8.615850e-47
Msa0098040	Msa1205280	0.815684	8.147889e-52	-8.615850e-47
Msa0098040	Msa1206460	0.822721	2.035636e-53	-8.615850e-47
Msa0098040	Msa1208950	0.822001	2.992380e-53	-8.615850e-47
Msa0098040	Msa1211230	-0.817984	2.482993e-52	-8.615850e-47
Msa0098040	Msa1216110	0.814941	1.192212e-51	-8.615850e-47
Msa0098040	Msa1225860	-0.851477	8.653436e-61	-8.615850e-47
Msa0098040	Msa1226520	0.828746	7.575441e-55	-8.615850e-47
Msa0098040	Msa1228200	0.831913	1.274921e-55	-8.615850e-47
Msa0098040	Msa1236410	0.825429	4.710387e-54	-8.615850e-47
Msa0098040	Msa1240260	0.822148	2.766432e-53	-8.615850e-47
Msa0098040	Msa1265650	0.863378	2.598454e-64	-8.615850e-47
Msa0098040	Msa1268240	0.809506	1.829953e-50	-8.615850e-47
Msa0098040	Msa1271270	0.810530	1.101285e-50	-8.615850e-47
Msa0098040	Msa1277640	0.821477	3.955329e-53	-8.615850e-47
Msa0098040	Msa1297230	0.861451	1.016768e-63	-8.615850e-47
Msa0098040	Msa1298220	0.823972	1.038324e-53	-8.615850e-47
Msa0098040	Msa1299400	-0.820312	7.330971e-53	-8.615850e-47
Msa0098040	Msa1303560	0.859771	3.284560e-63	-8.615850e-47
Msa0098040	Msa1303650	0.857178	1.948294e-62	-8.615850e-47
Msa0098040	Msa1307630	0.816164	6.367549e-52	-8.615850e-47
Msa0098040	Msa1316330	0.830227	3.307555e-55	-8.615850e-47
Msa0098040	Msa1320670	0.827533	1.484850e-54	-8.615850e-47
Msa0098040	Msa1321550	0.800849	1.188474e-48	-8.615850e-47
Msa0098040	Msa1325410	-0.808577	2.892554e-50	-8.615850e-47
Msa0098040	Msa1331050	-0.807608	4.651446e-50	-8.615850e-47
Msa0098040	Msa1341840	0.845254	4.553985e-59	-8.615850e-47
Msa0098040	Msa1343180	0.804715	1.890906e-49	-8.615850e-47
Msa0098040	Msa1343430	0.853379	2.484124e-61	-8.615850e-47
Msa0098040	Msa1345100	0.809174	2.155131e-50	-8.615850e-47
Msa0098040	Msa1346560	0.837508	4.987818e-57	-8.615850e-47
Msa0098040	Msa1355450	0.805767	1.138681e-49	-8.615850e-47
Msa0098040	Msa1356600	-0.831709	1.430983e-55	-8.615850e-47
Msa0098040	Msa1357790	0.837183	6.041300e-57	-8.615850e-47
Msa0098040	Msa1359690	0.826902	2.102419e-54	-8.615850e-47
Msa0098040	Msa1366340	0.816313	5.897801e-52	-8.615850e-47
Msa0098040	Msa1372040	0.852755	3.749003e-61	-8.615850e-47
Msa0098040	Msa1382300	0.859075	5.316282e-63	-8.615850e-47
Msa0098040	Msa1390440	0.821896	3.164535e-53	-8.615850e-47
Msa0098040	Msa1392580	0.851456	8.772763e-61	-8.615850e-47
Msa0098040	Msa1393280	0.800319	1.524078e-48	-8.615850e-47
Msa0098040	Msa1397400	0.805346	1.395212e-49	-8.615850e-47
Msa0098040	Msa1403710	0.801281	9.695197e-49	-8.615850e-47
Msa0098040	Msa1405460	0.879657	1.041889e-69	-8.615850e-47
Msa0098040	Msa1407840	0.823036	1.719103e-53	-8.615850e-47
Msa0098040	Msa1409410	0.826783	2.244925e-54	-8.615850e-47
Msa0098040	Msa1412000	0.836537	8.831650e-57	-8.615850e-47
Msa0098040	Msa1414170	0.815332	9.760904e-52	-8.615850e-47
Msa0098040	Msa1414640	0.803213	3.881458e-49	-8.615850e-47
Msa0098040	Msa1415540	0.824407	8.207195e-54	-8.615850e-47
Msa0098040	Msa1417380	0.831315	1.789501e-55	-8.615850e-47
Msa0098040	Msa1420950	0.800506	1.395633e-48	-8.615850e-47
Msa0098040	Msa1427100	0.857084	2.076595e-62	-8.615850e-47
Msa0098040	Msa1432500	0.816654	4.946667e-52	-8.615850e-47
Msa0098040	Msa1434220	0.833717	4.542488e-56	-8.615850e-47
Msa0098040	Msa1437810	0.819176	1.332542e-52	-8.615850e-47
Msa0098040	Msa1440310	0.803904	2.789927e-49	-8.615850e-47
Msa0098040	Msa1440630	0.844234	8.578854e-59	-8.615850e-47
Msa0098040	Msa1440960	0.807018	6.204890e-50	-8.615850e-47
Msa0098040	Msa1450100	0.823429	1.392103e-53	-8.615850e-47
Msa0098040	Msa1454500	0.811008	8.676409e-51	-8.615850e-47
Msa0098040	Msa1461370	0.819861	9.297560e-53	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0098040	MtrunA17_Chr1g0151961	93.955	397	5	4	1	396	1	379	0.0	759
Msa0098040	MtrunA17_Chr2g0289201	58.730	252	90	3	136	383	117	358	3.26e-89	274
Msa0098040	MtrunA17_Chr5g0413201	48.693	306	144	4	72	371	8	306	1.09e-85	263
Msa0098040	MtrunA17_Chr5g0439391	55.187	241	94	3	136	372	46	276	2.76e-71	225
Msa0098040	MtrunA17_Chr1g0192791	48.413	252	117	4	136	379	19	265	9.48e-70	220
Msa0098040	MtrunA17_Chr2g0305101	33.463	257	149	5	125	359	83	339	1.33e-37	139
Msa0098040	MtrunA17_Chr1g0149651	32.342	269	151	6	122	359	152	420	2.34e-35	135
Msa0098040	MtrunA17_Chr5g0398181	31.418	261	139	5	132	359	23	276	1.18e-33	127
Msa0098040	MtrunA17_Chr3g0137241	31.597	288	156	8	113	359	68	355	1.92e-33	128
Msa0098040	MtrunA17_Chr4g0065241	32.800	250	146	5	132	359	66	315	3.90e-33	127
Msa0098040	MtrunA17_Chr7g0240371	39.726	73	42	1	289	361	296	366	1.39e-11	65.9
Msa0098040	MtrunA17_Chr4g0008591	43.243	74	39	2	288	361	351	421	1.68e-11	65.9
Msa0098040	MtrunA17_Chr4g0025521	50.909	55	27	0	307	361	409	463	3.70e-11	65.1
Msa0098040	MtrunA17_Chr3g0141941	37.000	100	55	4	262	361	315	406	6.86e-11	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0098040	AT4G08150.1	70.710	338	75	8	67	396	77	398	1.26e-154	442
Msa0098040	AT1G62360.1	57.037	270	105	3	112	375	95	359	1.79e-89	275
Msa0098040	AT1G23380.1	56.904	239	96	3	135	371	84	317	8.76e-85	261
Msa0098040	AT1G23380.2	56.432	241	96	4	135	371	84	319	1.04e-82	256
Msa0098040	AT1G70510.1	53.165	237	108	1	135	371	68	301	2.73e-78	244
Msa0098040	AT1G70510.2	52.282	241	108	2	135	371	68	305	5.03e-76	238
Msa0098040	AT5G25220.2	33.700	273	143	8	122	359	134	403	1.76e-35	135
Msa0098040	AT5G25220.1	32.180	289	158	8	106	359	118	403	2.13e-35	135
Msa0098040	AT1G62990.1	30.996	271	146	7	121	359	14	275	3.65e-35	131
Msa0098040	AT5G11060.1	33.603	247	137	7	137	359	124	367	9.03e-34	130
Msa0098040	AT4G32040.2	30.645	248	143	4	137	359	119	362	1.66e-32	126
Msa0098040	AT4G32040.1	30.242	248	144	4	137	359	119	362	2.09e-32	126
Msa0098040	AT1G19700.1	50.909	55	27	0	307	361	358	412	5.62e-11	64.7
Msa0098040	AT1G19700.3	50.909	55	27	0	307	361	358	412	5.62e-11	64.7
Msa0098040	AT1G19700.5	50.909	55	27	0	307	361	358	412	5.62e-11	64.7
Msa0098040	AT1G19700.4	50.909	55	27	0	307	361	358	412	5.62e-11	64.7
Msa0098040	AT1G19700.2	50.909	55	27	0	307	361	358	412	5.62e-11	64.7
Msa0098040	AT2G27220.1	49.091	55	28	0	307	361	235	289	7.66e-11	63.9
Msa0098040	AT2G27220.3	49.091	55	28	0	307	361	235	289	7.66e-11	63.9
Msa0098040	AT1G75430.1	49.091	55	28	0	307	361	209	263	7.97e-11	62.8

Find 118 sgRNAs with CRISPR-Local

Find 564 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTACACACACGACTCATTTA+AGG	0.124114	1_3:+3921646	None:intergenic
TAACTTTAGTTTGTGGTATT+TGG	0.189589	1_3:-3921623	Msa0098040:three_prime_UTR
CTTGAACTTTGATTTGAATT+TGG	0.198147	1_3:+3931793	None:intergenic
ATCAGAAGACATGCAGTTTA+TGG	0.215872	1_3:-3922254	Msa0098040:CDS
AACAATTAATATGGTCACTA+TGG	0.246085	1_3:+3921822	None:intergenic
CTTTGATTTGAATTTGGATT+TGG	0.263194	1_3:+3931799	None:intergenic
CATTATATGTTACTCTTTGT+TGG	0.270999	1_3:-3921729	Msa0098040:three_prime_UTR
GCTGATGGTCCCTACCGTTT+AGG	0.271349	1_3:-3922175	Msa0098040:CDS
ACCAGTTATTTATTTGCTTC+TGG	0.277102	1_3:+3922308	None:intergenic
TTGAGGATGAGCAATGATTT+TGG	0.278077	1_3:+3931432	None:intergenic
TTTGGATTTGGATTTGGATT+TGG	0.287094	1_3:+3931817	None:intergenic
TTTGGATTTGGATTTGGATT+TGG	0.287094	1_3:+3931823	None:intergenic
GCAATGGAGTACAAGAAATT+TGG	0.293232	1_3:+3931769	None:intergenic
TTTGGATTTGGATTTGGATT+TGG	0.304722	1_3:+3931811	None:intergenic
TTTGAATTTGGATTTGGATT+TGG	0.320735	1_3:+3931805	None:intergenic
ACAGAGTGCAGCTCTTTATA+TGG	0.322707	1_3:-3922212	Msa0098040:CDS
ACCATGAATTGGTCTAGTTC+TGG	0.338115	1_3:+3930994	None:intergenic
CTGATGGTCCCTACCGTTTA+GGG	0.343258	1_3:-3922174	Msa0098040:CDS
CTAGACAAAAGCTACTTAAT+TGG	0.349186	1_3:-3922993	Msa0098040:CDS
ACCAAACGAGCCACCACTTC+CGG	0.349272	1_3:+3931084	None:intergenic
ACCGGAAGTGGTGGCTCGTT+TGG	0.365361	1_3:-3931085	Msa0098040:CDS
TTAGTCCATTTCTCAAATTA+CGG	0.369191	1_3:+3922104	None:intergenic
TGAAGATGAAAGTTGTTCAT+TGG	0.383854	1_3:+3931682	None:intergenic
GATATATGAAGCGTTGATAC+TGG	0.384637	1_3:-3922141	Msa0098040:three_prime_UTR
GACAAAGAAAACAATTAATA+TGG	0.387956	1_3:+3921813	None:intergenic
ACCAGAAGCAAATAAATAAC+TGG	0.406580	1_3:-3922309	Msa0098040:CDS
ATTATAATATATAGTTTAAG+TGG	0.417051	1_3:-3921981	Msa0098040:three_prime_UTR
ACCAGCCGTAATTTGAGAAA+TGG	0.428135	1_3:-3922109	Msa0098040:three_prime_UTR
GTTGGTGTTGGTGTTGGTGT+TGG	0.428209	1_3:+3931734	None:intergenic
GAAAGGAAAATTACCTAAAG+AGG	0.441916	1_3:-3923016	Msa0098040:CDS
AAATCCATAGCCTCTTGTAT+AGG	0.443002	1_3:+3930725	None:intergenic
ATGATGATTATGCATAATAT+TGG	0.443654	1_3:+3931513	None:intergenic
GTTGGTGTTGGTGTTGGTGT+TGG	0.444222	1_3:+3931728	None:intergenic
GTAGCATTGGCTGAATCAAC+AGG	0.445109	1_3:-3922337	Msa0098040:CDS
TTACAAATGGCCTTATCCTT+CGG	0.445371	1_3:-3922959	Msa0098040:intron
ATATTTGTTCTCATTAAAGC+TGG	0.445786	1_3:+3931547	None:intergenic
TGTTGATGTTGTACTTGATC+AGG	0.447416	1_3:+3931631	None:intergenic
GATTGTGTTGGTGTTGGTGT+TGG	0.454560	1_3:+3931722	None:intergenic
ATCATAATCATGGCCCTAAA+CGG	0.455352	1_3:+3922161	None:intergenic
GTTGATGATTGTGTTGGTGT+TGG	0.460652	1_3:+3931716	None:intergenic
ATTGGCTGAATCAACAGGTT+TGG	0.461797	1_3:-3922332	Msa0098040:CDS
TGAACATTATCACCAATGTC+GGG	0.462343	1_3:-3922080	Msa0098040:three_prime_UTR
CAAATTCAAATCAAAGTTCA+AGG	0.464843	1_3:-3931792	Msa0098040:CDS
TCAGGTTGAAAACAATTGTC+TGG	0.466169	1_3:+3931649	None:intergenic
TTGGTTGTTTCCACTAGCAA+TGG	0.467119	1_3:+3931753	None:intergenic
AACTTTCATCTTCAATCAAG+TGG	0.468283	1_3:-3931673	Msa0098040:CDS
TCCAGAACTAGACCAATTCA+TGG	0.475218	1_3:-3930995	Msa0098040:intron
CACTTTGCAATGGACCCCTT+CGG	0.484187	1_3:-3930673	Msa0098040:CDS
GGTGGGAATTGCATTACAAA+TGG	0.484691	1_3:-3922972	Msa0098040:CDS
CGCTTCATATATCATAATCA+TGG	0.486017	1_3:+3922151	None:intergenic
TCTGCTCGAGGATCAATCTC+TGG	0.491728	1_3:+3923123	None:intergenic
TTATAATATAATATATAAAA+CGG	0.497706	1_3:+3921997	None:intergenic
GACATGCATAACATGAAACT+TGG	0.498903	1_3:-3921879	Msa0098040:three_prime_UTR
ACCAATGTCGGGGTGGTGGT+TGG	0.501049	1_3:-3922069	Msa0098040:three_prime_UTR
GATTGGAGCTCCACCGGAAG+TGG	0.502488	1_3:-3931097	Msa0098040:CDS
GGACCCCTTCGGATCTTCCC+TGG	0.503797	1_3:-3930662	Msa0098040:intron
TCAATCAAAGGAAGAGGCAC+TGG	0.507111	1_3:-3922282	Msa0098040:CDS
TCCATTTCTCAAATTACGGC+TGG	0.507610	1_3:+3922108	None:intergenic
TGGTATTTGGAGTGCTCAGA+AGG	0.508759	1_3:-3921610	Msa0098040:three_prime_UTR
TTATAACGTACCGAAGGATA+AGG	0.509147	1_3:+3922949	None:intergenic
CACTATATTTCTTCAGCAAG+TGG	0.509181	1_3:+3923082	None:intergenic
GATTATGTTGATGATTGTGT+TGG	0.509559	1_3:+3931710	None:intergenic
GACAAAAGCTACTTAATTGG+TGG	0.509834	1_3:-3922990	Msa0098040:CDS
TTATATGGATGGTCATTACA+TGG	0.510806	1_3:-3922197	Msa0098040:CDS
AAGGCCTATACAAGAGGCTA+TGG	0.514686	1_3:-3930729	Msa0098040:CDS
TGGCTCGTTTGGTTGCGTCT+AGG	0.518848	1_3:-3931074	Msa0098040:CDS
AGCTTACATGGATTGTCAAA+AGG	0.519024	1_3:-3931392	Msa0098040:intron
TTGAACATTATCACCAATGT+CGG	0.520681	1_3:-3922081	Msa0098040:three_prime_UTR
TTCTTGTACTCCATTGCTAG+TGG	0.520994	1_3:-3931763	Msa0098040:CDS
GAGGATCAAGAGAATAGTGG+TGG	0.527205	1_3:-3923162	Msa0098040:CDS
ACAATTAATATGGTCACTAT+GGG	0.527439	1_3:+3921823	None:intergenic
AATTCACGGTCTTCTGCTCG+AGG	0.528363	1_3:+3923111	None:intergenic
CATCATCATCAAGGAGGAGG+AGG	0.530576	1_3:-3931496	Msa0098040:CDS
CACTTGCTGAAGAAATATAG+TGG	0.533238	1_3:-3923081	Msa0098040:CDS
TAATATATAGTTTAAGTGGA+AGG	0.538110	1_3:-3921977	Msa0098040:three_prime_UTR
GAAGAGGATCAAGAGAATAG+TGG	0.545053	1_3:-3923165	Msa0098040:CDS
GCTTCACCACTAGAACTGCT+TGG	0.545490	1_3:+3931469	None:intergenic
TCCAACCACCACCCCGACAT+TGG	0.547179	1_3:+3922068	None:intergenic
TATGTAGATTGGAGCTCCAC+CGG	0.547316	1_3:-3931103	Msa0098040:intron
GGAATCAGAGAAGGTAGCAT+TGG	0.547951	1_3:-3922350	Msa0098040:CDS
TATTTGTTCTCATTAAAGCT+GGG	0.551107	1_3:+3931548	None:intergenic
TATCACCAATGTCGGGGTGG+TGG	0.551798	1_3:-3922073	Msa0098040:three_prime_UTR
ATGCATAATCATCATCATCA+AGG	0.555030	1_3:-3931505	Msa0098040:CDS
ATAAACTGCATGTCTTCTGA+TGG	0.556878	1_3:+3922256	None:intergenic
AGACATGCAGTTTATGGTGA+TGG	0.558113	1_3:-3922248	Msa0098040:CDS
CAGCTAAATACACTTTGCAA+TGG	0.562110	1_3:-3930683	Msa0098040:CDS
TAATCATGGCCCTAAACGGT+AGG	0.564867	1_3:+3922165	None:intergenic
TGGAGCTCCACCGGAAGTGG+TGG	0.570424	1_3:-3931094	Msa0098040:CDS
GGTTCATCAATCAAAGGAAG+AGG	0.570775	1_3:-3922288	Msa0098040:CDS
TGTAAAAGACTAGAGTATTG+AGG	0.573212	1_3:+3931415	None:intergenic
TGTGTAGTAACTTTAGTTTG+TGG	0.577107	1_3:-3921630	Msa0098040:three_prime_UTR
AGTGCAGCTCTTTATATGGA+TGG	0.581356	1_3:-3922208	Msa0098040:CDS
GGGAGTCCAAGCAGTTCTAG+TGG	0.587384	1_3:-3931475	Msa0098040:CDS
ATAACTGGTTCATCAATCAA+AGG	0.592016	1_3:-3922294	Msa0098040:CDS
ACAAAAGCTACTTAATTGGT+GGG	0.596461	1_3:-3922989	Msa0098040:CDS
AATCATCATCATCAAGGAGG+AGG	0.600518	1_3:-3931499	Msa0098040:CDS
ACTCACCAGGGAAGATCCGA+AGG	0.608503	1_3:+3930657	None:intergenic
TTATCTTCAATATGAAGCGT+CGG	0.612636	1_3:-3922044	Msa0098040:three_prime_UTR
ATCATCATCAAGGAGGAGGA+GGG	0.622603	1_3:-3931495	Msa0098040:CDS
ATTAACAAGGCCTATACAAG+AGG	0.622954	1_3:-3930735	Msa0098040:CDS
AGGCGTTGGTTCATCAGAAG+AGG	0.623533	1_3:-3923181	Msa0098040:CDS
AATCATGGCCCTAAACGGTA+GGG	0.623950	1_3:+3922166	None:intergenic
ATGCAGTTTATGGTGATGGA+TGG	0.624056	1_3:-3922244	Msa0098040:CDS
ATATAAAGAGCTGCACTCTG+TGG	0.627158	1_3:+3922214	None:intergenic
AAACGAGCCACCACTTCCGG+TGG	0.627824	1_3:+3931087	None:intergenic
AGTTGTCACTACCAGAGTGT+AGG	0.636397	1_3:+3921752	None:intergenic
GATGGTCATTACATGGCTGA+TGG	0.643940	1_3:-3922190	Msa0098040:CDS
CACTATATAGGAATCAGAGA+AGG	0.647456	1_3:-3922359	Msa0098040:intron
CATGCTTGTGAAGTATAGAG+AGG	0.648293	1_3:-3930759	Msa0098040:CDS
CATTATCACCAATGTCGGGG+TGG	0.670905	1_3:-3922076	Msa0098040:three_prime_UTR
GAACATTATCACCAATGTCG+GGG	0.675009	1_3:-3922079	Msa0098040:three_prime_UTR
CTCACCAGGGAAGATCCGAA+GGG	0.678902	1_3:+3930658	None:intergenic
CTAGGCAAGAGTTTGAAGCA+AGG	0.689197	1_3:-3931056	Msa0098040:CDS
CATAATCATCATCATCAAGG+AGG	0.690149	1_3:-3931502	Msa0098040:CDS
AATTACGTACTCCTACACTC+TGG	0.700657	1_3:-3921763	Msa0098040:three_prime_UTR
TTATGCATAATATTGGTGTG+TGG	0.710252	1_3:+3931520	None:intergenic
AGTATAGAGAGGAATTAACA+AGG	0.714149	1_3:-3930748	Msa0098040:CDS
TCACCAGGGAAGATCCGAAG+GGG	0.724320	1_3:+3930659	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATATATATATAAAAAAAT+GGG	+	chr1_3:3922245-3922264	None:intergenic	0.0%
!!	AAAATATATATATAAAAAAA+TGG	+	chr1_3:3922246-3922265	None:intergenic	0.0%
!!!	TTTTTTTTTTTTTTTTTTTA+AGG	-	chr1_3:3923817-3923836	Msa0098040:intron	0.0%
!!	AATTTAAAAATATATTATAA+AGG	+	chr1_3:3926458-3926477	None:intergenic	0.0%
!!!	AATTTTTTTTTATATTTTTT+TGG	+	chr1_3:3927328-3927347	None:intergenic	0.0%
!!	AATAATAAAAAATAAAAAAA+GGG	+	chr1_3:3929058-3929077	None:intergenic	0.0%
!!	TTATAATATAATATATAAAA+CGG	+	chr1_3:3931410-3931429	None:intergenic	0.0%
!!	TTTAAACTTAATAATTATCA+TGG	+	chr1_3:3922508-3922527	None:intergenic	10.0%
!!!	AAAAAAAAAAAAAGTATGTT+GGG	+	chr1_3:3923809-3923828	None:intergenic	10.0%
!!!	AAAAAAAAAAAAAAGTATGT+TGG	+	chr1_3:3923810-3923829	None:intergenic	10.0%
!!	AAGTTAAAAAAATATGATTA+AGG	+	chr1_3:3926043-3926062	None:intergenic	10.0%
!!!	AAATAATTTTCATTTTTTCA+TGG	+	chr1_3:3926769-3926788	None:intergenic	10.0%
!!	TAAATGTAAAATTACATAAA+AGG	-	chr1_3:3926975-3926994	Msa0098040:intron	10.0%
!!!	TTTTATTAATGTATAATAAC+TGG	+	chr1_3:3927134-3927153	None:intergenic	10.0%
!!	GTTAAATAGTATTAATTTAT+AGG	-	chr1_3:3927272-3927291	Msa0098040:intron	10.0%
!!!	TATTTTACTTGAAATTATAA+AGG	-	chr1_3:3927608-3927627	Msa0098040:intron	10.0%
!!!	ATTTTACTTGAAATTATAAA+GGG	-	chr1_3:3927609-3927628	Msa0098040:intron	10.0%
!!!	CTTTTAAATTATTTTTTTAG+AGG	-	chr1_3:3928383-3928402	Msa0098040:intron	10.0%
!!!	ATTTTCTTAAATGTTTTTAT+AGG	-	chr1_3:3928936-3928955	Msa0098040:intron	10.0%
!!!	TTTTCTTAAATGTTTTTATA+GGG	-	chr1_3:3928937-3928956	Msa0098040:intron	10.0%
!!!	TAATTACATGATTTTTTTTT+AGG	-	chr1_3:3929287-3929306	Msa0098040:intron	10.0%
!!	ATAGAGTATAAATAATTATA+CGG	-	chr1_3:3929676-3929695	Msa0098040:intron	10.0%
!!	AATCTATAAAAAAAATACTT+TGG	-	chr1_3:3929908-3929927	Msa0098040:intron	10.0%
!!	TATATATATATAAAATGAGA+AGG	+	chr1_3:3930556-3930575	None:intergenic	10.0%
!!!	CATGTAATTTTTTTATTAAT+AGG	+	chr1_3:3930918-3930937	None:intergenic	10.0%
!!	ATTATAATATATAGTTTAAG+TGG	-	chr1_3:3931423-3931442	Msa0098040:CDS	10.0%
!!!	TTTTTAAATTGTTATCATGA+TGG	+	chr1_3:3922215-3922234	None:intergenic	15.0%
!!!	TTTTTTTATTGTTGCTAAAA+CGG	-	chr1_3:3923294-3923313	Msa0098040:intron	15.0%
!!!	CTATGAAAAATTTATAGTTT+TGG	-	chr1_3:3923688-3923707	Msa0098040:intron	15.0%
!!!	AAAAAAAAAAAAGTATGTTG+GGG	+	chr1_3:3923808-3923827	None:intergenic	15.0%
!!	AATAATATCATATAAGTTGT+TGG	+	chr1_3:3924006-3924025	None:intergenic	15.0%
!!!	AATTTTTTTCGAAATTTTAG+TGG	-	chr1_3:3925128-3925147	Msa0098040:intron	15.0%
!!!	ATTTTTTTCGAAATTTTAGT+GGG	-	chr1_3:3925129-3925148	Msa0098040:intron	15.0%
!!	CTAATTATTTATAAATGAAG+AGG	-	chr1_3:3925294-3925313	Msa0098040:intron	15.0%
!!	CTCTAATAAATAAGATTAAA+AGG	+	chr1_3:3925374-3925393	None:intergenic	15.0%
!!	TTATTTATTAGAGACATTTA+GGG	-	chr1_3:3925381-3925400	Msa0098040:intron	15.0%
!!!	TAATCTAATGATAATTTTGT+CGG	+	chr1_3:3925519-3925538	None:intergenic	15.0%
!!!	TATTGTTATTATTATTAGGT+TGG	-	chr1_3:3925577-3925596	Msa0098040:intron	15.0%
!!	GAACAACTATTATTATTATT+AGG	-	chr1_3:3925616-3925635	Msa0098040:intron	15.0%
!!	TAGTAATAAAAATTGTTACA+AGG	+	chr1_3:3925690-3925709	None:intergenic	15.0%
!!	GAAATAATAGATTAGTAATA+GGG	+	chr1_3:3925723-3925742	None:intergenic	15.0%
!!	TGAAATAATAGATTAGTAAT+AGG	+	chr1_3:3925724-3925743	None:intergenic	15.0%
!!	TCCTTATATAATTAAGTTTA+AGG	-	chr1_3:3925798-3925817	Msa0098040:intron	15.0%
!!	CCTTATATAATTAAGTTTAA+GGG	-	chr1_3:3925799-3925818	Msa0098040:intron	15.0%
!!!	ATTTTAATTAAAAACGTGTT+TGG	+	chr1_3:3925870-3925889	None:intergenic	15.0%
!!	AATTTAAATGTCTCTTATAT+AGG	-	chr1_3:3926000-3926019	Msa0098040:intron	15.0%
!!	ATTTAAATGTCTCTTATATA+GGG	-	chr1_3:3926001-3926020	Msa0098040:intron	15.0%
!!	AGATAATTAAAGATATCTAA+AGG	+	chr1_3:3926221-3926240	None:intergenic	15.0%
!!!	ATTTCGCTTTTAATAATTTT+TGG	-	chr1_3:3926475-3926494	Msa0098040:intron	15.0%
!!!	TTTTATGTTTTTGACATTTA+TGG	-	chr1_3:3926632-3926651	Msa0098040:intron	15.0%
!!!	TTTATGTTTTTGACATTTAT+GGG	-	chr1_3:3926633-3926652	Msa0098040:intron	15.0%
!!	AAAGTTATTTATACTTGAAA+AGG	-	chr1_3:3926710-3926729	Msa0098040:intron	15.0%
!!	AAAAATTGTTAAAAAAACGA+AGG	-	chr1_3:3927216-3927235	Msa0098040:intron	15.0%
!!	ATTAATACTATTTAACGATT+TGG	+	chr1_3:3927268-3927287	None:intergenic	15.0%
!!!	AATATATATGTTTTTAATGC+AGG	+	chr1_3:3927592-3927611	None:intergenic	15.0%
!!!	AGGTTTTAGATTAAATAATA+AGG	-	chr1_3:3927639-3927658	Msa0098040:intron	15.0%
!!!	GGTTTTAGATTAAATAATAA+GGG	-	chr1_3:3927640-3927659	Msa0098040:intron	15.0%
!!	TTAAATAATAAGGGTAAAAT+TGG	-	chr1_3:3927649-3927668	Msa0098040:intron	15.0%
!!	TCATTGAAAAAATAAACTAA+GGG	+	chr1_3:3927871-3927890	None:intergenic	15.0%
!!	GAAAAACAAATATTTAATGA+AGG	-	chr1_3:3927897-3927916	Msa0098040:intron	15.0%
!!!	TGAACTCTTTTTAAAAAAAA+TGG	-	chr1_3:3928350-3928369	Msa0098040:intron	15.0%
!!	AAATAGATAAAATTCATTCT+TGG	-	chr1_3:3928618-3928637	Msa0098040:intron	15.0%
!!	ATAAGTCATAAATTAACAAT+TGG	-	chr1_3:3929337-3929356	Msa0098040:intron	15.0%
!!	TAAGTCATAAATTAACAATT+GGG	-	chr1_3:3929338-3929357	Msa0098040:intron	15.0%
!!!	GTTAAAATTTTGTAAAAAAG+TGG	-	chr1_3:3929496-3929515	Msa0098040:intron	15.0%
!!	TGAGTCAAAAAAAAAAAAAT+AGG	+	chr1_3:3930097-3930116	None:intergenic	15.0%
!!!	AGTAATAAAATTTACTTTTG+TGG	+	chr1_3:3930717-3930736	None:intergenic	15.0%
!!	ATGATGATTATGCATAATAT+TGG	+	chr1_3:3921894-3921913	None:intergenic	20.0%
!!	TTTCAGTCAGAAATTAAATT+TGG	-	chr1_3:3922182-3922201	Msa0098040:CDS	20.0%
!!	TAAACAAACTATATGTAGAT+TGG	-	chr1_3:3922290-3922309	Msa0098040:CDS	20.0%
!!!	ATTAGAACTTATAGATTTTG+TGG	-	chr1_3:3922574-3922593	Msa0098040:intron	20.0%
!!	AATATCATCTTCACTTATAT+GGG	+	chr1_3:3923043-3923062	None:intergenic	20.0%
!!	AAATATCATCTTCACTTATA+TGG	+	chr1_3:3923044-3923063	None:intergenic	20.0%
!!	AGGTTAGGTATAAAAAAAAA+AGG	+	chr1_3:3923215-3923234	None:intergenic	20.0%
!!	GAATTGAAAAGTGATTAAAA+CGG	+	chr1_3:3923550-3923569	None:intergenic	20.0%
!!!	TTCAATTCTCTATTTTCTTT+TGG	-	chr1_3:3923562-3923581	Msa0098040:intron	20.0%
!!!	TCAATTCTCTATTTTCTTTT+GGG	-	chr1_3:3923563-3923582	Msa0098040:intron	20.0%
!!!	AAAAAAAAAAAGTATGTTGG+GGG	+	chr1_3:3923807-3923826	None:intergenic	20.0%
!!	TATACTTATGACATTATAGT+TGG	+	chr1_3:3924425-3924444	None:intergenic	20.0%
!!	GAGATGAAAATACTTATAAA+TGG	+	chr1_3:3924564-3924583	None:intergenic	20.0%
!!!	CTAGCAATAAAGTTTTAAAA+AGG	-	chr1_3:3924660-3924679	Msa0098040:intron	20.0%
!!	TTGGTAAGTTATAAAGAAAA+TGG	-	chr1_3:3924943-3924962	Msa0098040:intron	20.0%
!!	ATTATCAATTGAATGAAACA+AGG	-	chr1_3:3925009-3925028	Msa0098040:intron	20.0%
!!!	TTTTTTTCGAAATTTTAGTG+GGG	-	chr1_3:3925130-3925149	Msa0098040:intron	20.0%
!!!	ATTCTGGAAATTATTTTTGT+AGG	-	chr1_3:3925168-3925187	Msa0098040:intron	20.0%
!!!	TTCTGGAAATTATTTTTGTA+GGG	-	chr1_3:3925169-3925188	Msa0098040:intron	20.0%
!!	CTTATTTATTAGAGACATTT+AGG	-	chr1_3:3925380-3925399	Msa0098040:intron	20.0%
!!!	TATTTTTAATTTGACGTGTT+TGG	-	chr1_3:3925443-3925462	Msa0098040:intron	20.0%
!!!	TTTGGTTCAATTTTTAAGAA+AGG	-	chr1_3:3925461-3925480	Msa0098040:intron	20.0%
!!!	TTGGTTCAATTTTTAAGAAA+GGG	-	chr1_3:3925462-3925481	Msa0098040:intron	20.0%
!!	AGGAAAAGTTGTTAATAATA+TGG	+	chr1_3:3925670-3925689	None:intergenic	20.0%
!!	CCCTTAAACTTAATTATATA+AGG	+	chr1_3:3925802-3925821	None:intergenic	20.0%
!!!	TATCTGGTTTAAAATATAGA+CGG	-	chr1_3:3925959-3925978	Msa0098040:intron	20.0%
!!	AAAATATGATTAAGGACTAA+AGG	+	chr1_3:3926035-3926054	None:intergenic	20.0%
!!!	TTATGTTTTTGACATTTATG+GGG	-	chr1_3:3926634-3926653	Msa0098040:intron	20.0%
!!	TATCTAAATCCTTTATCATT+TGG	-	chr1_3:3926659-3926678	Msa0098040:intron	20.0%
!!	TGAGACAAGTTTAATATAAA+AGG	-	chr1_3:3927465-3927484	Msa0098040:intron	20.0%
!!	ATAAAAGGCAAAGAATTTAA+CGG	-	chr1_3:3927480-3927499	Msa0098040:intron	20.0%
!!!	TGGTTCGTTAATTTTTTTTT+TGG	+	chr1_3:3927508-3927527	None:intergenic	20.0%
!!!	TTCATTTTATATTCCTTTGA+AGG	+	chr1_3:3927545-3927564	None:intergenic	20.0%
!!	AAATTATAAAGGGTAAAACA+AGG	-	chr1_3:3927619-3927638	Msa0098040:intron	20.0%
!!	CTCATTGAAAAAATAAACTA+AGG	+	chr1_3:3927872-3927891	None:intergenic	20.0%
!!	TTGAATAATAAGGGTAAATA+TGG	-	chr1_3:3928021-3928040	Msa0098040:intron	20.0%
!!	TTCATATTAGATACATTCTT+CGG	+	chr1_3:3928254-3928273	None:intergenic	20.0%
!!	TTTGAATTGCATTCAAATAA+TGG	-	chr1_3:3928494-3928513	Msa0098040:intron	20.0%
!!	TTGAATTGCATTCAAATAAT+GGG	-	chr1_3:3928495-3928514	Msa0098040:intron	20.0%
!!!	AAACGATGCTTATTTTTTAT+AGG	+	chr1_3:3928694-3928713	None:intergenic	20.0%
!!	ATACTATAATAACATGAAAG+TGG	+	chr1_3:3928827-3928846	None:intergenic	20.0%
!!!	TCTCATAAAATTCACTTTTA+TGG	-	chr1_3:3928964-3928983	Msa0098040:intron	20.0%
!!	TAAAGTTGCTAATTAACTTT+AGG	+	chr1_3:3929234-3929253	None:intergenic	20.0%
!!	AAAGTTAATTAGCAACTTTA+AGG	-	chr1_3:3929234-3929253	Msa0098040:intron	20.0%
!!!	AAAATTTTGTAAAAAAGTGG+TGG	-	chr1_3:3929499-3929518	Msa0098040:intron	20.0%
!!!	AAATTTTGTAAAAAAGTGGT+GGG	-	chr1_3:3929500-3929519	Msa0098040:intron	20.0%
!!	CTTGAAAAAAAATATAAAGG+TGG	+	chr1_3:3929529-3929548	None:intergenic	20.0%
!!	GCACTTGAAAAAAAATATAA+AGG	+	chr1_3:3929532-3929551	None:intergenic	20.0%
!!	AGTATAAATAATTATACGGA+AGG	-	chr1_3:3929680-3929699	Msa0098040:intron	20.0%
!!!	TGTGAAATAATGTTTTCATT+CGG	-	chr1_3:3929748-3929767	Msa0098040:intron	20.0%
!!	ATTCTAATATCATCTTAGAA+CGG	+	chr1_3:3929891-3929910	None:intergenic	20.0%
!!	TGATTTATAAATCCTAAGTT+AGG	-	chr1_3:3930019-3930038	Msa0098040:intron	20.0%
!!!	ATACATTTTGCTATAGATAT+AGG	+	chr1_3:3930066-3930085	None:intergenic	20.0%
!!	AATTACTTAGACATTAATGT+TGG	-	chr1_3:3930159-3930178	Msa0098040:intron	20.0%
!!!	TAAAATTTACTTTTGTGGTT+TGG	+	chr1_3:3930712-3930731	None:intergenic	20.0%
!!	TATATTCGAAACAAATGAAT+TGG	+	chr1_3:3930832-3930851	None:intergenic	20.0%
!!!	AAAAATTACATGTTGCATTT+TGG	-	chr1_3:3930926-3930945	Msa0098040:intron	20.0%
!!	TAATATATAGTTTAAGTGGA+AGG	-	chr1_3:3931427-3931446	Msa0098040:CDS	20.0%
!!	GACAAAGAAAACAATTAATA+TGG	+	chr1_3:3931594-3931613	None:intergenic	20.0%
!	TTTGAATTTGGATTTGGATT+TGG	+	chr1_3:3921602-3921621	None:intergenic	25.0%
!!!	CTTTGATTTGAATTTGGATT+TGG	+	chr1_3:3921608-3921627	None:intergenic	25.0%
!!!	CTTGAACTTTGATTTGAATT+TGG	+	chr1_3:3921614-3921633	None:intergenic	25.0%
!	CAAATTCAAATCAAAGTTCA+AGG	-	chr1_3:3921612-3921631	Msa0098040:three_prime_UTR	25.0%
!	TATTTGTTCTCATTAAAGCT+GGG	+	chr1_3:3921859-3921878	None:intergenic	25.0%
!	ATATTTGTTCTCATTAAAGC+TGG	+	chr1_3:3921860-3921879	None:intergenic	25.0%
!	TTGGTTAATCTCAAATTTAG+TGG	-	chr1_3:3922121-3922140	Msa0098040:three_prime_UTR	25.0%
!	TTAATCTCAAATTTAGTGGA+AGG	-	chr1_3:3922125-3922144	Msa0098040:three_prime_UTR	25.0%
!	TAAATTGTTATCATGATGGT+GGG	+	chr1_3:3922211-3922230	None:intergenic	25.0%
!	TTAAATTGTTATCATGATGG+TGG	+	chr1_3:3922212-3922231	None:intergenic	25.0%
!	AAATGGTGTTTATGTTTAAC+AGG	-	chr1_3:3922609-3922628	Msa0098040:intron	25.0%
!	ACGAACTCATAAATTAATTC+TGG	-	chr1_3:3922869-3922888	Msa0098040:intron	25.0%
!	GATAAAAAATGTAGCGATTA+GGG	+	chr1_3:3923084-3923103	None:intergenic	25.0%
!	TGATAAAAAATGTAGCGATT+AGG	+	chr1_3:3923085-3923104	None:intergenic	25.0%
!!!	TTGTATTTTTTTTTCCCCTT+TGG	-	chr1_3:3923178-3923197	Msa0098040:CDS	25.0%
!!	TTTTATACCTAACCTTTTAG+AGG	-	chr1_3:3923220-3923239	Msa0098040:intron	25.0%
!!	TTTATACCTAACCTTTTAGA+GGG	-	chr1_3:3923221-3923240	Msa0098040:intron	25.0%
!	GAAACAGTAAAAAATTCATC+TGG	+	chr1_3:3923273-3923292	None:intergenic	25.0%
!	TCTGACAAAATTATTCTTCT+AGG	-	chr1_3:3923376-3923395	Msa0098040:intron	25.0%
!	CTGACAAAATTATTCTTCTA+GGG	-	chr1_3:3923377-3923396	Msa0098040:intron	25.0%
!	AAAAAAGGATGCAAAAGAAA+GGG	+	chr1_3:3923753-3923772	None:intergenic	25.0%
!	TAAAAAAGGATGCAAAAGAA+AGG	+	chr1_3:3923754-3923773	None:intergenic	25.0%
!!!	TCCTTTTTTACAAAACACAT+TGG	-	chr1_3:3923764-3923783	Msa0098040:intron	25.0%
!!	TCCAATGTGTTTTGTAAAAA+AGG	+	chr1_3:3923768-3923787	None:intergenic	25.0%
!	AAATATGATCAAAGTATGTC+AGG	+	chr1_3:3924093-3924112	None:intergenic	25.0%
!	AATATCATATAAGCTGTTGT+TGG	-	chr1_3:3924137-3924156	Msa0098040:intron	25.0%
!	TTAACTAGGTCATCTAATAT+GGG	-	chr1_3:3924266-3924285	Msa0098040:intron	25.0%
!	GAGGGAGTAATAAAAAAATA+AGG	-	chr1_3:3924292-3924311	Msa0098040:intron	25.0%
!!	GAAATTTTATAAGCTGTTGT+TGG	-	chr1_3:3924735-3924754	Msa0098040:intron	25.0%
!	TATAAAGAAAATGGCAGAAA+AGG	-	chr1_3:3924952-3924971	Msa0098040:intron	25.0%
!!	GGTAAAATTGGAATTTTAGA+TGG	-	chr1_3:3925211-3925230	Msa0098040:intron	25.0%
!!!	ATAATTAGATAGTGCCATTT+AGG	+	chr1_3:3925282-3925301	None:intergenic	25.0%
!	TAAAAGGAGTAATTATCAAG+TGG	+	chr1_3:3925358-3925377	None:intergenic	25.0%
!!!	TTCAATTTTTAAGAAAGGGA+GGG	-	chr1_3:3925466-3925485	Msa0098040:intron	25.0%
!	ACTCATAAGCATGTATTTAT+CGG	+	chr1_3:3926296-3926315	None:intergenic	25.0%
!	ATAATGCATATAGTCAAACA+AGG	-	chr1_3:3926346-3926365	Msa0098040:intron	25.0%
!	TTGATTGATCCAAATGATAA+AGG	+	chr1_3:3926671-3926690	None:intergenic	25.0%
!	AGAAGTCATTATAAAATGGA+GGG	+	chr1_3:3926794-3926813	None:intergenic	25.0%
!	AGACAGAAGTCATTATAAAA+TGG	+	chr1_3:3926798-3926817	None:intergenic	25.0%
!!	TTTTATAATGACTTCTGTCT+TGG	-	chr1_3:3926798-3926817	Msa0098040:intron	25.0%
!	TTTATAATGACTTCTGTCTT+GGG	-	chr1_3:3926799-3926818	Msa0098040:intron	25.0%
!!!	TGAAGGCATTTAATTGTATA+TGG	+	chr1_3:3927528-3927547	None:intergenic	25.0%
!	ATACAATTAAATGCCTTCAA+AGG	-	chr1_3:3927529-3927548	Msa0098040:intron	25.0%
!!	AAGCTATAAGCTCATTTTAA+TGG	-	chr1_3:3927832-3927851	Msa0098040:intron	25.0%
!!!	AGCTTTTGCTTTGAATAATA+AGG	-	chr1_3:3928011-3928030	Msa0098040:intron	25.0%
!!!	GCTTTTGCTTTGAATAATAA+GGG	-	chr1_3:3928012-3928031	Msa0098040:intron	25.0%
!	TTAGACACATCCATTAAAAA+AGG	-	chr1_3:3928412-3928431	Msa0098040:intron	25.0%
!!!	AAAATTGCAGCCTTTTTTAA+TGG	+	chr1_3:3928425-3928444	None:intergenic	25.0%
!!!	GATGCTTATTTTTTATAGGA+GGG	+	chr1_3:3928690-3928709	None:intergenic	25.0%
!!!	AGCATCGTTTTAGAAAAAAT+TGG	-	chr1_3:3928704-3928723	Msa0098040:intron	25.0%
!!!	GTTTCCATGAAGTTTTTTTA+TGG	-	chr1_3:3928898-3928917	Msa0098040:intron	25.0%
!	TTGTCCATAAAAAAACTTCA+TGG	+	chr1_3:3928905-3928924	None:intergenic	25.0%
!	ATTGAATGTAGAAGTGATAT+CGG	+	chr1_3:3929192-3929211	None:intergenic	25.0%
!!	CATCTAAGGTACAAATTTAA+GGG	+	chr1_3:3929569-3929588	None:intergenic	25.0%
!	GATTTATAAATCAACTTGCA+AGG	+	chr1_3:3930012-3930031	None:intergenic	25.0%
!!	ATATAGGCCTTTAAGAATTT+GGG	+	chr1_3:3930050-3930069	None:intergenic	25.0%
!	TGAGTAGATGATAAAAATGA+AGG	-	chr1_3:3930203-3930222	Msa0098040:intron	25.0%
!!	TTTTCCTTTCTTTTTCTTCT+TGG	+	chr1_3:3930378-3930397	None:intergenic	25.0%
!!!	CAAGAATATTCGATTTTTTG+CGG	+	chr1_3:3930606-3930625	None:intergenic	25.0%
!!!	GTTTAATTTGGATCGATTTT+TGG	+	chr1_3:3930956-3930975	None:intergenic	25.0%
!	GAGAAAGGAAAAAAAAACTA+TGG	+	chr1_3:3930997-3931016	None:intergenic	25.0%
!!	GAAGAATATAACTTTGAGAA+AGG	+	chr1_3:3931012-3931031	None:intergenic	25.0%
!	TCTCAAAGTTATATTCTTCT+TGG	-	chr1_3:3931013-3931032	Msa0098040:CDS	25.0%
!	TTAGTCCATTTCTCAAATTA+CGG	+	chr1_3:3931303-3931322	None:intergenic	25.0%
!	ACAATTAATATGGTCACTAT+GGG	+	chr1_3:3931584-3931603	None:intergenic	25.0%
!	AACAATTAATATGGTCACTA+TGG	+	chr1_3:3931585-3931604	None:intergenic	25.0%
!	CATTATATGTTACTCTTTGT+TGG	-	chr1_3:3931675-3931694	Msa0098040:CDS	25.0%
!!!	TAACTTTAGTTTGTGGTATT+TGG	-	chr1_3:3931781-3931800	Msa0098040:CDS	25.0%
	TTTGGATTTGGATTTGGATT+TGG	+	chr1_3:3921578-3921597	None:intergenic	30.0%
	TTTGGATTTGGATTTGGATT+TGG	+	chr1_3:3921578-3921597	None:intergenic	30.0%
	TTTGGATTTGGATTTGGATT+TGG	+	chr1_3:3921578-3921597	None:intergenic	30.0%
!!	GATTATGTTGATGATTGTGT+TGG	+	chr1_3:3921697-3921716	None:intergenic	30.0%
	TGAAGATGAAAGTTGTTCAT+TGG	+	chr1_3:3921725-3921744	None:intergenic	30.0%
	AACTTTCATCTTCAATCAAG+TGG	-	chr1_3:3921731-3921750	Msa0098040:three_prime_UTR	30.0%
	AAAGCTGGGTAATGAAAAAT+CGG	+	chr1_3:3921845-3921864	None:intergenic	30.0%
	TTATGCATAATATTGGTGTG+TGG	+	chr1_3:3921887-3921906	None:intergenic	30.0%
	ATGCATAATCATCATCATCA+AGG	-	chr1_3:3921899-3921918	Msa0098040:three_prime_UTR	30.0%
!!	TGTAAAAGACTAGAGTATTG+AGG	+	chr1_3:3921992-3922011	None:intergenic	30.0%
!	TAGTCTTTTACAAGCTTACA+TGG	-	chr1_3:3922000-3922019	Msa0098040:three_prime_UTR	30.0%
!!!	AGGGGGTATATTTTGTTTTA+TGG	-	chr1_3:3922436-3922455	Msa0098040:intron	30.0%
	AGTATAGAGAGGAATTAACA+AGG	-	chr1_3:3922656-3922675	Msa0098040:intron	30.0%
!!	TTGAAAGCATGTGAGATTTT+TGG	+	chr1_3:3922996-3923015	None:intergenic	30.0%
	AAGGAAATCAAATGTCCAAA+GGG	+	chr1_3:3923196-3923215	None:intergenic	30.0%
	AAAGGAAATCAAATGTCCAA+AGG	+	chr1_3:3923197-3923216	None:intergenic	30.0%
!	GAATAATTTTGTCAGAACTC+AGG	+	chr1_3:3923372-3923391	None:intergenic	30.0%
!	CAGCAAAACATTGATTAACA+AGG	+	chr1_3:3923406-3923425	None:intergenic	30.0%
!!	TGTTTTGCTGACTAAAAACT+CGG	-	chr1_3:3923416-3923435	Msa0098040:intron	30.0%
	ACTCTTTCTCATCATTACAT+TGG	-	chr1_3:3923495-3923514	Msa0098040:intron	30.0%
!	CATTACATTGGTCAGTTTTT+CGG	-	chr1_3:3923507-3923526	Msa0098040:intron	30.0%
	TCAAACAGGTCATCTAATAA+GGG	+	chr1_3:3924054-3924073	None:intergenic	30.0%
!	AAAAGTGCAAATTGTCAAAC+AGG	+	chr1_3:3924068-3924087	None:intergenic	30.0%
	GTTAACTAGGTCATCTAATA+TGG	-	chr1_3:3924265-3924284	Msa0098040:intron	30.0%
	CTAGGTCATTTATTGTAGAA+CGG	-	chr1_3:3924349-3924368	Msa0098040:intron	30.0%
	AGAACTAACTCATGTATGTT+GGG	+	chr1_3:3924539-3924558	None:intergenic	30.0%
	CTTCTTAACAAGTGTCATAA+CGG	+	chr1_3:3924706-3924725	None:intergenic	30.0%
!	GACACTTGTTAAGAAGTTTA+AGG	-	chr1_3:3924710-3924729	Msa0098040:intron	30.0%
!	CTTAACAAGGAATTGGTTTA+TGG	+	chr1_3:3924778-3924797	None:intergenic	30.0%
	CAAGCACTAATTCTATTCAT+TGG	-	chr1_3:3924924-3924943	Msa0098040:intron	30.0%
!	AACCCTCATTCAATTTTGTA+GGG	-	chr1_3:3925067-3925086	Msa0098040:intron	30.0%
	ATCCCTACAAAATTGAATGA+GGG	+	chr1_3:3925072-3925091	None:intergenic	30.0%
	TTTCAATTTACCGTTTACTC+TGG	+	chr1_3:3925102-3925121	None:intergenic	30.0%
	GTGAAGCATGAATAAAATTC+TGG	-	chr1_3:3925152-3925171	Msa0098040:intron	30.0%
	AATGCTAAAAGGGGTAAAAT+TGG	-	chr1_3:3925199-3925218	Msa0098040:intron	30.0%
!!	TGGAATTTTAGATGGTTTGT+AGG	-	chr1_3:3925219-3925238	Msa0098040:intron	30.0%
!!	GGAATTTTAGATGGTTTGTA+GGG	-	chr1_3:3925220-3925239	Msa0098040:intron	30.0%
!!	GAATTTTAGATGGTTTGTAG+GGG	-	chr1_3:3925221-3925240	Msa0098040:intron	30.0%
	ACCAGGTAAAATTTCCTAAA+TGG	-	chr1_3:3925265-3925284	Msa0098040:intron	30.0%
!!	GTTCAATTTTTAAGAAAGGG+AGG	-	chr1_3:3925465-3925484	Msa0098040:intron	30.0%
!!	TCAATTTTTAAGAAAGGGAG+GGG	-	chr1_3:3925467-3925486	Msa0098040:intron	30.0%
	ATCAATCTTTGTGGACTTAA+GGG	+	chr1_3:3925938-3925957	None:intergenic	30.0%
	TATCAATCTTTGTGGACTTA+AGG	+	chr1_3:3925939-3925958	None:intergenic	30.0%
	TCCACAAAGATTGATATATC+TGG	-	chr1_3:3925943-3925962	Msa0098040:intron	30.0%
	ACCAGATATATCAATCTTTG+TGG	+	chr1_3:3925947-3925966	None:intergenic	30.0%
	GTAAAACATCAAAGACATCA+AGG	+	chr1_3:3926096-3926115	None:intergenic	30.0%
	GACTATATGCATTATTCACA+TGG	+	chr1_3:3926341-3926360	None:intergenic	30.0%
!	TCAAACAAGGTCTATCATTT+TGG	-	chr1_3:3926359-3926378	Msa0098040:intron	30.0%
!	CAAACAAGGTCTATCATTTT+GGG	-	chr1_3:3926360-3926379	Msa0098040:intron	30.0%
!	TGGTGATGTAAAATACTTAC+TGG	+	chr1_3:3926502-3926521	None:intergenic	30.0%
!	TTAAAAGTATGGTCGAAAAG+TGG	+	chr1_3:3926522-3926541	None:intergenic	30.0%
!	CATGAGTTGACTTAAAAGTA+TGG	+	chr1_3:3926533-3926552	None:intergenic	30.0%
	CAGAAGTCATTATAAAATGG+AGG	+	chr1_3:3926795-3926814	None:intergenic	30.0%
!	TGAAGTGTTTGGTAAAATAG+CGG	-	chr1_3:3926939-3926958	Msa0098040:intron	30.0%
	ACGAGCTTATAACTTATTTC+AGG	+	chr1_3:3927750-3927769	None:intergenic	30.0%
	TTGACAAAAAAAGCTCTGTT+TGG	+	chr1_3:3927788-3927807	None:intergenic	30.0%
	AAATAAACTAAGGGTCTGTT+TGG	+	chr1_3:3927862-3927881	None:intergenic	30.0%
	TATTTAATGAAGGCTCTGTT+TGG	-	chr1_3:3927907-3927926	Msa0098040:intron	30.0%
	TTGACAAAAAAAGCTCTGTT+TGG	+	chr1_3:3927788-3927807	None:intergenic	30.0%
!!!	AGAGCTAAAAGCTCTTTTTT+TGG	-	chr1_3:3928213-3928232	Msa0098040:intron	30.0%
!!!	GAGCTAAAAGCTCTTTTTTT+GGG	-	chr1_3:3928214-3928233	Msa0098040:intron	30.0%
	CTAATATGAATCTAGTCCAA+TGG	-	chr1_3:3928264-3928283	Msa0098040:intron	30.0%
	TAAAAATACGAGTCTTCCAT+TGG	+	chr1_3:3928283-3928302	None:intergenic	30.0%
	TAACTATTGTTAGATGACGA+TGG	-	chr1_3:3928461-3928480	Msa0098040:intron	30.0%
	TATAGTGTGACTTTGAATTC+TGG	-	chr1_3:3928521-3928540	Msa0098040:intron	30.0%
	TTCACACTTATATAGTGTGT+GGG	-	chr1_3:3928556-3928575	Msa0098040:intron	30.0%
!!!	CGATGCTTATTTTTTATAGG+AGG	+	chr1_3:3928691-3928710	None:intergenic	30.0%
	TCCTCAATTTCGATATTTCA+AGG	-	chr1_3:3928774-3928793	Msa0098040:intron	30.0%
	ACCTTGAAATATCGAAATTG+AGG	+	chr1_3:3928778-3928797	None:intergenic	30.0%
	GTGCAAACGAATTTAATGTA+AGG	+	chr1_3:3928805-3928824	None:intergenic	30.0%
	ATACTTAATGCAATGCACTA+AGG	-	chr1_3:3929027-3929046	Msa0098040:intron	30.0%
!	CCATCTAAGGTACAAATTTA+AGG	+	chr1_3:3929570-3929589	None:intergenic	30.0%
	CCTTAAATTTGTACCTTAGA+TGG	-	chr1_3:3929567-3929586	Msa0098040:intron	30.0%
!!!	TTGTTTTTTCTCTCCATCTA+AGG	+	chr1_3:3929583-3929602	None:intergenic	30.0%
!	AAAAACAATGTTTCTGTGTG+TGG	-	chr1_3:3929595-3929614	Msa0098040:intron	30.0%
	TTAAGTCAAAAACCATGCAT+TGG	-	chr1_3:3929722-3929741	Msa0098040:intron	30.0%
!	TTGTTATTGAAAGTCCCATA+TGG	-	chr1_3:3929776-3929795	Msa0098040:intron	30.0%
	TGTTATTGAAAGTCCCATAT+GGG	-	chr1_3:3929777-3929796	Msa0098040:intron	30.0%
!	AGTCTTATATGATCCCATAT+GGG	+	chr1_3:3929793-3929812	None:intergenic	30.0%
!	AAGTCTTATATGATCCCATA+TGG	+	chr1_3:3929794-3929813	None:intergenic	30.0%
	TACGTCTATCTATCTATAAG+TGG	-	chr1_3:3929815-3929834	Msa0098040:intron	30.0%
	ACGTCTATCTATCTATAAGT+GGG	-	chr1_3:3929816-3929835	Msa0098040:intron	30.0%
!	CCATACAAAATTGAGTTGTA+AGG	+	chr1_3:3929852-3929871	None:intergenic	30.0%
!	CCTTACAACTCAATTTTGTA+TGG	-	chr1_3:3929849-3929868	Msa0098040:intron	30.0%
	AATATCATCTTAGAACGGTT+GGG	+	chr1_3:3929886-3929905	None:intergenic	30.0%
	TAATATCATCTTAGAACGGT+TGG	+	chr1_3:3929887-3929906	None:intergenic	30.0%
!	GATATAGGCCTTTAAGAATT+TGG	+	chr1_3:3930051-3930070	None:intergenic	30.0%
	CTTTCCAAGAAGAAAAAGAA+AGG	-	chr1_3:3930371-3930390	Msa0098040:intron	30.0%
	GAAAGGAAAATTACCTAAAG+AGG	-	chr1_3:3930388-3930407	Msa0098040:intron	30.0%
	CTAGACAAAAGCTACTTAAT+TGG	-	chr1_3:3930411-3930430	Msa0098040:intron	30.0%
	ACAAAAGCTACTTAATTGGT+GGG	-	chr1_3:3930415-3930434	Msa0098040:intron	30.0%
!!!	TTCGCTTTTTTTTATCGGTT+TGG	+	chr1_3:3930581-3930600	None:intergenic	30.0%
!!!	CGGTATTCGCTTTTTTTTAT+CGG	+	chr1_3:3930586-3930605	None:intergenic	30.0%
	CGCAAAAAATCGAATATTCT+TGG	-	chr1_3:3930604-3930623	Msa0098040:intron	30.0%
!!	GTTGTTTTGTAAAAACCGTT+AGG	-	chr1_3:3930639-3930658	Msa0098040:intron	30.0%
	CATCACATTGTGGTTTAATT+TGG	+	chr1_3:3930968-3930987	None:intergenic	30.0%
	TGGACATATGATCACTATAT+AGG	-	chr1_3:3931033-3931052	Msa0098040:CDS	30.0%
	ACCAGAAGCAAATAAATAAC+TGG	-	chr1_3:3931095-3931114	Msa0098040:CDS	30.0%
	ACCAGTTATTTATTTGCTTC+TGG	+	chr1_3:3931099-3931118	None:intergenic	30.0%
!	ATAACTGGTTCATCAATCAA+AGG	-	chr1_3:3931110-3931129	Msa0098040:intron	30.0%
	TTATATGGATGGTCATTACA+TGG	-	chr1_3:3931207-3931226	Msa0098040:intron	30.0%
	CGCTTCATATATCATAATCA+TGG	+	chr1_3:3931256-3931275	None:intergenic	30.0%
	TTGAACATTATCACCAATGT+CGG	-	chr1_3:3931323-3931342	Msa0098040:intron	30.0%
	TTATCTTCAATATGAAGCGT+CGG	-	chr1_3:3931360-3931379	Msa0098040:intron	30.0%
!!	TGTGTAGTAACTTTAGTTTG+TGG	-	chr1_3:3931774-3931793	Msa0098040:CDS	30.0%
	GCAATGGAGTACAAGAAATT+TGG	+	chr1_3:3921638-3921657	None:intergenic	35.0%
!!	TCAGGTTGAAAACAATTGTC+TGG	+	chr1_3:3921758-3921777	None:intergenic	35.0%
	TGTTGATGTTGTACTTGATC+AGG	+	chr1_3:3921776-3921795	None:intergenic	35.0%
	CATAATCATCATCATCAAGG+AGG	-	chr1_3:3921902-3921921	Msa0098040:three_prime_UTR	35.0%
!	TTGAGGATGAGCAATGATTT+TGG	+	chr1_3:3921975-3921994	None:intergenic	35.0%
!	AGCTTACATGGATTGTCAAA+AGG	-	chr1_3:3922012-3922031	Msa0098040:three_prime_UTR	35.0%
!	AACCCTCTTTTTCTCTTGAA+GGG	+	chr1_3:3922102-3922121	None:intergenic	35.0%
!	AAACCCTCTTTTTCTCTTGA+AGG	+	chr1_3:3922103-3922122	None:intergenic	35.0%
	TTCAAGAGAAAAAGAGGGTT+TGG	-	chr1_3:3922102-3922121	Msa0098040:three_prime_UTR	35.0%
	TAGACCAATTCATGGTACAA+GGG	-	chr1_3:3922417-3922436	Msa0098040:intron	35.0%
!!!	TGTGGTTTTAGACGTTGAAA+TGG	-	chr1_3:3922592-3922611	Msa0098040:intron	35.0%
	ATTAACAAGGCCTATACAAG+AGG	-	chr1_3:3922669-3922688	Msa0098040:intron	35.0%
	AAATCCATAGCCTCTTGTAT+AGG	+	chr1_3:3922682-3922701	None:intergenic	35.0%
	CAGCTAAATACACTTTGCAA+TGG	-	chr1_3:3922721-3922740	Msa0098040:intron	35.0%
!	AGATAAAGTACTACTCACCA+GGG	+	chr1_3:3922762-3922781	None:intergenic	35.0%
!	AAGATAAAGTACTACTCACC+AGG	+	chr1_3:3922763-3922782	None:intergenic	35.0%
	AGGAAATCAAATGTCCAAAG+GGG	+	chr1_3:3923195-3923214	None:intergenic	35.0%
!!	GTTTTGCTGACTAAAAACTC+GGG	-	chr1_3:3923417-3923436	Msa0098040:intron	35.0%
	GACTAAAAACTCGGGTTTAT+CGG	-	chr1_3:3923425-3923444	Msa0098040:intron	35.0%
!	ATCGGTTTCTAAGGATTCAT+TGG	-	chr1_3:3923443-3923462	Msa0098040:intron	35.0%
!	TCGGTTTCTAAGGATTCATT+GGG	-	chr1_3:3923444-3923463	Msa0098040:intron	35.0%
	AGTGATTAAAACGGCATTAG+CGG	+	chr1_3:3923541-3923560	None:intergenic	35.0%
	GCAAATGTTAACCTATGCTT+GGG	-	chr1_3:3923585-3923604	Msa0098040:intron	35.0%
	CAAATGTTAACCTATGCTTG+GGG	-	chr1_3:3923586-3923605	Msa0098040:intron	35.0%
!	AAAAAAAGTATGTTGGGGGT+TGG	+	chr1_3:3923803-3923822	None:intergenic	35.0%
!!	TCAACTGTGTCACTTAACAT+GGG	+	chr1_3:3923878-3923897	None:intergenic	35.0%
	GTCAAACAGGTCATCTAATA+AGG	+	chr1_3:3924055-3924074	None:intergenic	35.0%
	TATGTGTGTCTGAGTTAACT+AGG	-	chr1_3:3924252-3924271	Msa0098040:intron	35.0%
	AATAGTGCACATTGTCAACT+AGG	-	chr1_3:3924331-3924350	Msa0098040:intron	35.0%
	GTCATTTATTGTAGAACGGA+GGG	-	chr1_3:3924353-3924372	Msa0098040:intron	35.0%
	TATAGTTGGCCAATATCAGA+TGG	+	chr1_3:3924411-3924430	None:intergenic	35.0%
	GAAAGTTACTTGTGACATTG+TGG	-	chr1_3:3924472-3924491	Msa0098040:intron	35.0%
	GAGAACTAACTCATGTATGT+TGG	+	chr1_3:3924540-3924559	None:intergenic	35.0%
	AAGTCAAAAGCCATGTTAAC+AGG	-	chr1_3:3924596-3924615	Msa0098040:intron	35.0%
	CTCAAAAACACCTGTTAACA+TGG	+	chr1_3:3924609-3924628	None:intergenic	35.0%
!	CGGTTTTCTTAACAAGGAAT+TGG	+	chr1_3:3924785-3924804	None:intergenic	35.0%
!!!	TCTCATCGGTTTTCTTAACA+AGG	+	chr1_3:3924791-3924810	None:intergenic	35.0%
	TAAGAAAACCGATGAGAGAA+AGG	-	chr1_3:3924794-3924813	Msa0098040:intron	35.0%
	TGCAATTACCTTTCTCTCAT+CGG	+	chr1_3:3924805-3924824	None:intergenic	35.0%
	TCGAATGAATCTCTCTTGAT+CGG	-	chr1_3:3924861-3924880	Msa0098040:intron	35.0%
	TGAAACAAGGCATGTGAAAA+AGG	-	chr1_3:3925022-3925041	Msa0098040:intron	35.0%
	GAAACAAGGCATGTGAAAAA+GGG	-	chr1_3:3925023-3925042	Msa0098040:intron	35.0%
!	CAACCCTCATTCAATTTTGT+AGG	-	chr1_3:3925066-3925085	Msa0098040:intron	35.0%
	CATCCCTACAAAATTGAATG+AGG	+	chr1_3:3925073-3925092	None:intergenic	35.0%
!	GATGTCATTTCCAGAGTAAA+CGG	-	chr1_3:3925089-3925108	Msa0098040:intron	35.0%
	AGGGTGAAACAAATGCTAAA+AGG	-	chr1_3:3925188-3925207	Msa0098040:intron	35.0%
	GGGTGAAACAAATGCTAAAA+GGG	-	chr1_3:3925189-3925208	Msa0098040:intron	35.0%
	GGTGAAACAAATGCTAAAAG+GGG	-	chr1_3:3925190-3925209	Msa0098040:intron	35.0%
!	GCCATTTAGGAAATTTTACC+TGG	+	chr1_3:3925269-3925288	None:intergenic	35.0%
	TGGTCGATAATTAGTACTCA+AGG	+	chr1_3:3925338-3925357	None:intergenic	35.0%
!!!	TTTGGTTCGAGAGTTTTGAA+GGG	-	chr1_3:3925408-3925427	Msa0098040:intron	35.0%
	GGTTGGAAGTTGTATTATCT+TGG	-	chr1_3:3925594-3925613	Msa0098040:intron	35.0%
!	AAAAACGTGTTTGGTTCACA+AGG	+	chr1_3:3925861-3925880	None:intergenic	35.0%
	GCTCTGTTTGGTAAAAATAG+CGG	-	chr1_3:3926821-3926840	Msa0098040:intron	35.0%
!	GATAAGCTAGTTGAAGTGTT+TGG	-	chr1_3:3926928-3926947	Msa0098040:intron	35.0%
!	GATAAGCTAGTTGAAGTGTT+TGG	-	chr1_3:3926928-3926947	Msa0098040:intron	35.0%
	ACGAGCTTATAGCTTATTTC+AGG	+	chr1_3:3928122-3928141	None:intergenic	35.0%
	CTTCACACTTATATAGTGTG+TGG	-	chr1_3:3928555-3928574	Msa0098040:intron	35.0%
	AAGCAATTTCTTGACACACA+GGG	+	chr1_3:3928658-3928677	None:intergenic	35.0%
	TAAGCAATTTCTTGACACAC+AGG	+	chr1_3:3928659-3928678	None:intergenic	35.0%
	AGGTCATCCACATGAAATAA+AGG	+	chr1_3:3929159-3929178	None:intergenic	35.0%
	TAGAAGTGATATCGGATACA+AGG	+	chr1_3:3929184-3929203	None:intergenic	35.0%
	TATTTCACATGACCAATGCA+TGG	+	chr1_3:3929737-3929756	None:intergenic	35.0%
!	CAAAATTGAGTTGTAAGGTG+AGG	+	chr1_3:3929847-3929866	None:intergenic	35.0%
	TGCTATAAGATCTCTCACAT+TGG	-	chr1_3:3929937-3929956	Msa0098040:intron	35.0%
!	GATGATAAAAATGAAGGCGT+TGG	-	chr1_3:3930209-3930228	Msa0098040:intron	35.0%
!!	GCAAGTGGTTTTTCAATTCA+CGG	+	chr1_3:3930310-3930329	None:intergenic	35.0%
	CACTATATTTCTTCAGCAAG+TGG	+	chr1_3:3930325-3930344	None:intergenic	35.0%
!	CACTTGCTGAAGAAATATAG+TGG	-	chr1_3:3930323-3930342	Msa0098040:intron	35.0%
	GACAAAAGCTACTTAATTGG+TGG	-	chr1_3:3930414-3930433	Msa0098040:intron	35.0%
!!	TTACAAATGGCCTTATCCTT+CGG	-	chr1_3:3930445-3930464	Msa0098040:intron	35.0%
	TTATAACGTACCGAAGGATA+AGG	+	chr1_3:3930458-3930477	None:intergenic	35.0%
	GAAATCTGATCTGATCCTAA+CGG	+	chr1_3:3930657-3930676	None:intergenic	35.0%
!!	TGGTTTGGTTCAGTTTAGTT+TGG	+	chr1_3:3930697-3930716	None:intergenic	35.0%
	ATGGAACATACATCACATTG+TGG	+	chr1_3:3930978-3930997	None:intergenic	35.0%
	CACTATATAGGAATCAGAGA+AGG	-	chr1_3:3931045-3931064	Msa0098040:CDS	35.0%
	ATAAACTGCATGTCTTCTGA+TGG	+	chr1_3:3931151-3931170	None:intergenic	35.0%
	ATCAGAAGACATGCAGTTTA+TGG	-	chr1_3:3931150-3931169	Msa0098040:intron	35.0%
	ATCATAATCATGGCCCTAAA+CGG	+	chr1_3:3931246-3931265	None:intergenic	35.0%
!!	GATATATGAAGCGTTGATAC+TGG	-	chr1_3:3931263-3931282	Msa0098040:intron	35.0%
	TGAACATTATCACCAATGTC+GGG	-	chr1_3:3931324-3931343	Msa0098040:intron	35.0%
	GACATGCATAACATGAAACT+TGG	-	chr1_3:3931525-3931544	Msa0098040:CDS	35.0%
	TTCTTGTACTCCATTGCTAG+TGG	-	chr1_3:3921641-3921660	Msa0098040:three_prime_UTR	40.0%
!	TTGGTTGTTTCCACTAGCAA+TGG	+	chr1_3:3921654-3921673	None:intergenic	40.0%
!!	GTTGATGATTGTGTTGGTGT+TGG	+	chr1_3:3921691-3921710	None:intergenic	40.0%
	AATCATCATCATCAAGGAGG+AGG	-	chr1_3:3921905-3921924	Msa0098040:three_prime_UTR	40.0%
!	TCTTTTTCTCTTGAAGGGCA+GGG	+	chr1_3:3922097-3922116	None:intergenic	40.0%
	TGCCCTTCAAGAGAAAAAGA+GGG	-	chr1_3:3922097-3922116	Msa0098040:three_prime_UTR	40.0%
	TCCAGAACTAGACCAATTCA+TGG	-	chr1_3:3922409-3922428	Msa0098040:intron	40.0%
!	ACCATGAATTGGTCTAGTTC+TGG	+	chr1_3:3922413-3922432	None:intergenic	40.0%
	CTAGACCAATTCATGGTACA+AGG	-	chr1_3:3922416-3922435	Msa0098040:intron	40.0%
	AGACCAATTCATGGTACAAG+GGG	-	chr1_3:3922418-3922437	Msa0098040:intron	40.0%
!	TTCGATTTGCACTGTGATGT+CGG	-	chr1_3:3922533-3922552	Msa0098040:intron	40.0%
	CATGCTTGTGAAGTATAGAG+AGG	-	chr1_3:3922645-3922664	Msa0098040:intron	40.0%
!	TCGAGTGTTTCTGAACATAC+TGG	-	chr1_3:3922961-3922980	Msa0098040:CDS	40.0%
	TCTCACATGCTTTCAAATCG+TGG	-	chr1_3:3923000-3923019	Msa0098040:CDS	40.0%
	CTCACATGCTTTCAAATCGT+GGG	-	chr1_3:3923001-3923020	Msa0098040:CDS	40.0%
!	AATGCTCCCTCTAAAAGGTT+AGG	+	chr1_3:3923230-3923249	None:intergenic	40.0%
	ACAACAATGCTCCCTCTAAA+AGG	+	chr1_3:3923235-3923254	None:intergenic	40.0%
	TAAAACGGAAATCCACACGT+TGG	-	chr1_3:3923309-3923328	Msa0098040:intron	40.0%
	GGCAAATGTTAACCTATGCT+TGG	-	chr1_3:3923584-3923603	Msa0098040:intron	40.0%
!!	ATTCCTTAACTTGTGCCCTT+AGG	-	chr1_3:3923711-3923730	Msa0098040:intron	40.0%
!!	TTCCTTAACTTGTGCCCTTA+GGG	-	chr1_3:3923712-3923731	Msa0098040:intron	40.0%
	CATGTTATCTTGTGCCCTAA+GGG	+	chr1_3:3923729-3923748	None:intergenic	40.0%
	TCATGTTATCTTGTGCCCTA+AGG	+	chr1_3:3923730-3923749	None:intergenic	40.0%
	AACTTCAAGTATGTTGGGGT+TGG	+	chr1_3:3923847-3923866	None:intergenic	40.0%
	AGGGAACTTCAAGTATGTTG+GGG	+	chr1_3:3923851-3923870	None:intergenic	40.0%
	GAGGGAACTTCAAGTATGTT+GGG	+	chr1_3:3923852-3923871	None:intergenic	40.0%
!!	GTCAACTGTGTCACTTAACA+TGG	+	chr1_3:3923879-3923898	None:intergenic	40.0%
	ACAGGTCATCTAATAAGGGA+CGG	+	chr1_3:3924050-3924069	None:intergenic	40.0%
	CTAGGTCATCTAATATGGGA+CGG	-	chr1_3:3924270-3924289	Msa0098040:intron	40.0%
	GGTCATTTATTGTAGAACGG+AGG	-	chr1_3:3924352-3924371	Msa0098040:intron	40.0%
	GTTACTTGTGACATTGTGGT+TGG	-	chr1_3:3924476-3924495	Msa0098040:intron	40.0%
	TGTTGTTGGATTCGTCTCAT+CGG	-	chr1_3:3924749-3924768	Msa0098040:intron	40.0%
	AATCTCTCTTGATCGGTGAT+GGG	-	chr1_3:3924868-3924887	Msa0098040:intron	40.0%
	AGGGGTGAATGTATAAGTGT+TGG	-	chr1_3:3925239-3925258	Msa0098040:intron	40.0%
	GGGGTGAATGTATAAGTGTT+GGG	-	chr1_3:3925240-3925259	Msa0098040:intron	40.0%
!	GGGTGAATGTATAAGTGTTG+GGG	-	chr1_3:3925241-3925260	Msa0098040:intron	40.0%
!	AGAGACATTTAGGGTCTGTT+TGG	-	chr1_3:3925390-3925409	Msa0098040:intron	40.0%
!!	GTTTGGTTCGAGAGTTTTGA+AGG	-	chr1_3:3925407-3925426	Msa0098040:intron	40.0%
!!!	TTGGTTCGAGAGTTTTGAAG+GGG	-	chr1_3:3925409-3925428	Msa0098040:intron	40.0%
!!!	GTCTATCATTTTGGGACAGT+GGG	-	chr1_3:3926368-3926387	Msa0098040:intron	40.0%
!!	GGTAACACTTTAGCTCTGTT+TGG	+	chr1_3:3928149-3928168	None:intergenic	40.0%
	ATACATTCTTCGGCTCTGTT+TGG	+	chr1_3:3928244-3928263	None:intergenic	40.0%
!	GGCTGTTCCTTTATTTCATG+TGG	-	chr1_3:3929149-3929168	Msa0098040:intron	40.0%
	ACTCTAACGTAGAGTTCAGT+CGG	+	chr1_3:3929422-3929441	None:intergenic	40.0%
	ACTGAACTCTACGTTAGAGT+TGG	-	chr1_3:3929422-3929441	Msa0098040:intron	40.0%
!	ATTTGGGATGAGCCTAACTT+AGG	+	chr1_3:3930034-3930053	None:intergenic	40.0%
	GGCTCATCCCAAATTCTTAA+AGG	-	chr1_3:3930040-3930059	Msa0098040:intron	40.0%
	GAAGAGGATCAAGAGAATAG+TGG	-	chr1_3:3930239-3930258	Msa0098040:intron	40.0%
!	AGCTTTTGTCTAGCCTCTTT+AGG	+	chr1_3:3930404-3930423	None:intergenic	40.0%
	GGTGGGAATTGCATTACAAA+TGG	-	chr1_3:3930432-3930451	Msa0098040:intron	40.0%
	GGAGATTTATAACGTACCGA+AGG	+	chr1_3:3930464-3930483	None:intergenic	40.0%
	GAAGAATGTGAGAAGAGAGT+AGG	+	chr1_3:3930485-3930504	None:intergenic	40.0%
	ATTGGCTGAATCAACAGGTT+TGG	-	chr1_3:3931072-3931091	Msa0098040:CDS	40.0%
	GGTTCATCAATCAAAGGAAG+AGG	-	chr1_3:3931116-3931135	Msa0098040:intron	40.0%
	AGACATGCAGTTTATGGTGA+TGG	-	chr1_3:3931156-3931175	Msa0098040:intron	40.0%
!!	ATGCAGTTTATGGTGATGGA+TGG	-	chr1_3:3931160-3931179	Msa0098040:intron	40.0%
	ATATAAAGAGCTGCACTCTG+TGG	+	chr1_3:3931193-3931212	None:intergenic	40.0%
	ACAGAGTGCAGCTCTTTATA+TGG	-	chr1_3:3931192-3931211	Msa0098040:intron	40.0%
	AGTGCAGCTCTTTATATGGA+TGG	-	chr1_3:3931196-3931215	Msa0098040:intron	40.0%
	ACCAGCCGTAATTTGAGAAA+TGG	-	chr1_3:3931295-3931314	Msa0098040:intron	40.0%
	TCCATTTCTCAAATTACGGC+TGG	+	chr1_3:3931299-3931318	None:intergenic	40.0%
	GAACATTATCACCAATGTCG+GGG	-	chr1_3:3931325-3931344	Msa0098040:intron	40.0%
	AATTACGTACTCCTACACTC+TGG	-	chr1_3:3931641-3931660	Msa0098040:CDS	40.0%
	CTACACACACGACTCATTTA+AGG	+	chr1_3:3931761-3931780	None:intergenic	40.0%
!!	GATTGTGTTGGTGTTGGTGT+TGG	+	chr1_3:3921685-3921704	None:intergenic	45.0%
	ATCATCATCAAGGAGGAGGA+GGG	-	chr1_3:3921909-3921928	Msa0098040:three_prime_UTR	45.0%
!	CTCTTTTTCTCTTGAAGGGC+AGG	+	chr1_3:3922098-3922117	None:intergenic	45.0%
	CTGCCCTTCAAGAGAAAAAG+AGG	-	chr1_3:3922096-3922115	Msa0098040:three_prime_UTR	45.0%
	TATGTAGATTGGAGCTCCAC+CGG	-	chr1_3:3922301-3922320	Msa0098040:CDS	45.0%
!	CTAGGCAAGAGTTTGAAGCA+AGG	-	chr1_3:3922348-3922367	Msa0098040:CDS	45.0%
	GACCAATTCATGGTACAAGG+GGG	-	chr1_3:3922419-3922438	Msa0098040:intron	45.0%
	TACCCCCTTGTACCATGAAT+TGG	+	chr1_3:3922424-3922443	None:intergenic	45.0%
	AAGGCCTATACAAGAGGCTA+TGG	-	chr1_3:3922675-3922694	Msa0098040:intron	45.0%
	TGTCACTGATGTGTGAGTGA+CGG	-	chr1_3:3922910-3922929	Msa0098040:intron	45.0%
	TTTCAAATCGTGGGAGCAGA+AGG	-	chr1_3:3923010-3923029	Msa0098040:CDS	45.0%
	TTCAAATCGTGGGAGCAGAA+GGG	-	chr1_3:3923011-3923030	Msa0098040:CDS	45.0%
	AGAACTCAGGAGCTAAGCTT+TGG	+	chr1_3:3923359-3923378	None:intergenic	45.0%
!!	CTCGGGTTTATCGGTTTCTA+AGG	-	chr1_3:3923434-3923453	Msa0098040:intron	45.0%
	AAACGGCATTAGCGGTAAGA+CGG	+	chr1_3:3923533-3923552	None:intergenic	45.0%
	AAGTATGTTGGGGGTTGGAT+TGG	+	chr1_3:3923798-3923817	None:intergenic	45.0%
	GGAGGGAACTTCAAGTATGT+TGG	+	chr1_3:3923853-3923872	None:intergenic	45.0%
!!	GTCACTTAACATGGGTTGGA+GGG	+	chr1_3:3923870-3923889	None:intergenic	45.0%
!!	TGTCACTTAACATGGGTTGG+AGG	+	chr1_3:3923871-3923890	None:intergenic	45.0%
!!	CTGTGTCACTTAACATGGGT+TGG	+	chr1_3:3923874-3923893	None:intergenic	45.0%
	GTCATCTAATAAGGGACGGA+GGG	+	chr1_3:3924046-3924065	None:intergenic	45.0%
	GTCATCTAATATGGGACGGA+GGG	-	chr1_3:3924274-3924293	Msa0098040:intron	45.0%
	GAGTAGTACTTGGGTGACAT+TGG	-	chr1_3:3924375-3924394	Msa0098040:intron	45.0%
	GTGCCAATGCCATCTGATAT+TGG	-	chr1_3:3924399-3924418	Msa0098040:intron	45.0%
	TGGCCAATATCAGATGGCAT+TGG	+	chr1_3:3924405-3924424	None:intergenic	45.0%
	GAATCTCTCTTGATCGGTGA+TGG	-	chr1_3:3924867-3924886	Msa0098040:intron	45.0%
!!	TGTATAAGTGTTGGGGTACC+AGG	-	chr1_3:3925248-3925267	Msa0098040:intron	45.0%
	AGAGGATCGTTGCATACTCA+AGG	-	chr1_3:3925312-3925331	Msa0098040:intron	45.0%
!!!	TTCGAGAGTTTTGAAGGGGA+GGG	-	chr1_3:3925413-3925432	Msa0098040:intron	45.0%
!!	TTTTAAGAAAGGGAGGGGAG+AGG	-	chr1_3:3925472-3925491	Msa0098040:intron	45.0%
!!	GTTGGTTCGAGAATTAGGAG+GGG	+	chr1_3:3925912-3925931	None:intergenic	45.0%
!!	CGTTGGTTCGAGAATTAGGA+GGG	+	chr1_3:3925913-3925932	None:intergenic	45.0%
	CCTCCTAATTCTCGAACCAA+CGG	-	chr1_3:3925911-3925930	Msa0098040:intron	45.0%
!!!	GGTCTATCATTTTGGGACAG+TGG	-	chr1_3:3926367-3926386	Msa0098040:intron	45.0%
	ATGTCTCTCGATGTGATGCA+CGG	-	chr1_3:3929127-3929146	Msa0098040:intron	45.0%
	GTGATATCGGATACAAGGTC+AGG	+	chr1_3:3929179-3929198	None:intergenic	45.0%
	GTAGAGTTCAGTCGGAAGTA+AGG	+	chr1_3:3929414-3929433	None:intergenic	45.0%
	GAGGATCAAGAGAATAGTGG+TGG	-	chr1_3:3930242-3930261	Msa0098040:intron	45.0%
	GGAATCAGAGAAGGTAGCAT+TGG	-	chr1_3:3931054-3931073	Msa0098040:CDS	45.0%
!!	GTAGCATTGGCTGAATCAAC+AGG	-	chr1_3:3931067-3931086	Msa0098040:CDS	45.0%
!	TCAATCAAAGGAAGAGGCAC+TGG	-	chr1_3:3931122-3931141	Msa0098040:intron	45.0%
	GATGGTCATTACATGGCTGA+TGG	-	chr1_3:3931214-3931233	Msa0098040:intron	45.0%
	AATCATGGCCCTAAACGGTA+GGG	+	chr1_3:3931241-3931260	None:intergenic	45.0%
	TAATCATGGCCCTAAACGGT+AGG	+	chr1_3:3931242-3931261	None:intergenic	45.0%
	AGTTGTCACTACCAGAGTGT+AGG	+	chr1_3:3931655-3931674	None:intergenic	45.0%
!	TGGTATTTGGAGTGCTCAGA+AGG	-	chr1_3:3931794-3931813	Msa0098040:CDS	45.0%
!!	AATATATATATAAAAAAATG+GGG	+	chr1_3:3922244-3922263	None:intergenic	5.0%
!!	CAATAATAAATATTATTATA+AGG	+	chr1_3:3925562-3925581	None:intergenic	5.0%
!!!	TTATTATTGTTATTATTATT+AGG	-	chr1_3:3925573-3925592	Msa0098040:intron	5.0%
!!!	TTTTATTAAATTTTTGTTTT+CGG	-	chr1_3:3927073-3927092	Msa0098040:intron	5.0%
!!	CAATAATAAAAAATAAAAAA+AGG	+	chr1_3:3929059-3929078	None:intergenic	5.0%
!!	GTTGGTGTTGGTGTTGGTGT+TGG	+	chr1_3:3921673-3921692	None:intergenic	50.0%
!!	GTTGGTGTTGGTGTTGGTGT+TGG	+	chr1_3:3921673-3921692	None:intergenic	50.0%
	CATCATCATCAAGGAGGAGG+AGG	-	chr1_3:3921908-3921927	Msa0098040:three_prime_UTR	50.0%
	GCTTCACCACTAGAACTGCT+TGG	+	chr1_3:3921938-3921957	None:intergenic	50.0%
	CACTTTGCAATGGACCCCTT+CGG	-	chr1_3:3922731-3922750	Msa0098040:intron	50.0%
	GTCACTGATGTGTGAGTGAC+GGG	-	chr1_3:3922911-3922930	Msa0098040:intron	50.0%
	AACATAGAGTCGCCAACGTG+TGG	+	chr1_3:3923324-3923343	None:intergenic	50.0%
	ACACGTTGGCGACTCTATGT+TGG	-	chr1_3:3923323-3923342	Msa0098040:intron	50.0%
	CACGTTGGCGACTCTATGTT+GGG	-	chr1_3:3923324-3923343	Msa0098040:intron	50.0%
	ACCTATGCTTGGGGCTGTTA+AGG	-	chr1_3:3923595-3923614	Msa0098040:intron	50.0%
	TCCTTAACAGCCCCAAGCAT+AGG	+	chr1_3:3923599-3923618	None:intergenic	50.0%
!	TGCCCTAAGGGCACAAGTTA+AGG	+	chr1_3:3923717-3923736	None:intergenic	50.0%
!	TGTTGGGGGTTGGATTGGAA+TGG	+	chr1_3:3923793-3923812	None:intergenic	50.0%
	GGTCATCTAATAAGGGACGG+AGG	+	chr1_3:3924047-3924066	None:intergenic	50.0%
	GGTCATCTAATATGGGACGG+AGG	-	chr1_3:3924273-3924292	Msa0098040:intron	50.0%
	AGAACGGAGGGAGTAGTACT+TGG	-	chr1_3:3924365-3924384	Msa0098040:intron	50.0%
	GAACGGAGGGAGTAGTACTT+GGG	-	chr1_3:3924366-3924385	Msa0098040:intron	50.0%
!!!	GTTCGAGAGTTTTGAAGGGG+AGG	-	chr1_3:3925412-3925431	Msa0098040:intron	50.0%
!!!	TCGAGAGTTTTGAAGGGGAG+GGG	-	chr1_3:3925414-3925433	Msa0098040:intron	50.0%
!	TGTTTGGTTCACAAGGCGAG+GGG	+	chr1_3:3925854-3925873	None:intergenic	50.0%
!	GTGTTTGGTTCACAAGGCGA+GGG	+	chr1_3:3925855-3925874	None:intergenic	50.0%
	TTCGAGAATTAGGAGGGGAG+GGG	+	chr1_3:3925907-3925926	None:intergenic	50.0%
	GTTCGAGAATTAGGAGGGGA+GGG	+	chr1_3:3925908-3925927	None:intergenic	50.0%
!!	CCGTTGGTTCGAGAATTAGG+AGG	+	chr1_3:3925914-3925933	None:intergenic	50.0%
!!	GGTCCGTTGGTTCGAGAATT+AGG	+	chr1_3:3925917-3925936	None:intergenic	50.0%
	TTGTGGACTTAAGGGTCCGT+TGG	+	chr1_3:3925930-3925949	None:intergenic	50.0%
	CTTCTGTCTTGGGCTCTGTT+TGG	-	chr1_3:3926809-3926828	Msa0098040:intron	50.0%
	TTCTTGACACACAGGGACAC+AGG	+	chr1_3:3928651-3928670	None:intergenic	50.0%
	CATCACATCGAGAGACATGC+GGG	+	chr1_3:3929125-3929144	None:intergenic	50.0%
	GCATCACATCGAGAGACATG+CGG	+	chr1_3:3929126-3929145	None:intergenic	50.0%
	TGTCTCTCGATGTGATGCAC+GGG	-	chr1_3:3929128-3929147	Msa0098040:intron	50.0%
!!	AGGCGTTGGTTCATCAGAAG+AGG	-	chr1_3:3930223-3930242	Msa0098040:intron	50.0%
	TCTGCTCGAGGATCAATCTC+TGG	+	chr1_3:3930284-3930303	None:intergenic	50.0%
	AATTCACGGTCTTCTGCTCG+AGG	+	chr1_3:3930296-3930315	None:intergenic	50.0%
	CTGATGGTCCCTACCGTTTA+GGG	-	chr1_3:3931230-3931249	Msa0098040:intron	50.0%
	CATTATCACCAATGTCGGGG+TGG	-	chr1_3:3931328-3931347	Msa0098040:intron	50.0%
!	GGGAGTCCAAGCAGTTCTAG+TGG	-	chr1_3:3921929-3921948	Msa0098040:three_prime_UTR	55.0%
	ACCAAACGAGCCACCACTTC+CGG	+	chr1_3:3922323-3922342	None:intergenic	55.0%
	TGGCTCGTTTGGTTGCGTCT+AGG	-	chr1_3:3922330-3922349	Msa0098040:CDS	55.0%
	TCACCAGGGAAGATCCGAAG+GGG	+	chr1_3:3922748-3922767	None:intergenic	55.0%
	CTCACCAGGGAAGATCCGAA+GGG	+	chr1_3:3922749-3922768	None:intergenic	55.0%
	ACTCACCAGGGAAGATCCGA+AGG	+	chr1_3:3922750-3922769	None:intergenic	55.0%
	AATCGTGGGAGCAGAAGGGT+AGG	-	chr1_3:3923015-3923034	Msa0098040:CDS	55.0%
	ATCGTGGGAGCAGAAGGGTA+GGG	-	chr1_3:3923016-3923035	Msa0098040:CDS	55.0%
!!!	AGAGTTTTGAAGGGGAGGGG+AGG	-	chr1_3:3925417-3925436	Msa0098040:intron	55.0%
!!!	GAGTTTTGAAGGGGAGGGGA+GGG	-	chr1_3:3925418-3925437	Msa0098040:intron	55.0%
!!!	AGTTTTGAAGGGGAGGGGAG+GGG	-	chr1_3:3925419-3925438	Msa0098040:intron	55.0%
	AAGAAAGGGAGGGGAGAGGA+AGG	-	chr1_3:3925476-3925495	Msa0098040:intron	55.0%
	AGAAAGGGAGGGGAGAGGAA+GGG	-	chr1_3:3925477-3925496	Msa0098040:intron	55.0%
!	CGTGTTTGGTTCACAAGGCG+AGG	+	chr1_3:3925856-3925875	None:intergenic	55.0%
	AGAATTAGGAGGGGAGGGGA+GGG	+	chr1_3:3925903-3925922	None:intergenic	55.0%
	GGTTCGAGAATTAGGAGGGG+AGG	+	chr1_3:3925909-3925928	None:intergenic	55.0%
	TTGACACACAGGGACACAGG+AGG	+	chr1_3:3928648-3928667	None:intergenic	55.0%
	GCTGATGGTCCCTACCGTTT+AGG	-	chr1_3:3931229-3931248	Msa0098040:intron	55.0%
	TATCACCAATGTCGGGGTGG+TGG	-	chr1_3:3931331-3931350	Msa0098040:intron	55.0%
	GATTGGAGCTCCACCGGAAG+TGG	-	chr1_3:3922307-3922326	Msa0098040:CDS	60.0%
	AAACGAGCCACCACTTCCGG+TGG	+	chr1_3:3922320-3922339	None:intergenic	60.0%
	ACCGGAAGTGGTGGCTCGTT+TGG	-	chr1_3:3922319-3922338	Msa0098040:CDS	60.0%
	TTGGTTCACAAGGCGAGGGG+AGG	+	chr1_3:3925851-3925870	None:intergenic	60.0%
	GAATTAGGAGGGGAGGGGAG+GGG	+	chr1_3:3925902-3925921	None:intergenic	60.0%
	GAGAATTAGGAGGGGAGGGG+AGG	+	chr1_3:3925904-3925923	None:intergenic	60.0%
!	ACCAATGTCGGGGTGGTGGT+TGG	-	chr1_3:3931335-3931354	Msa0098040:intron	60.0%
	TCCAACCACCACCCCGACAT+TGG	+	chr1_3:3931339-3931358	None:intergenic	60.0%
	TGGAGCTCCACCGGAAGTGG+TGG	-	chr1_3:3922310-3922329	Msa0098040:CDS	65.0%
	GGACCCCTTCGGATCTTCCC+TGG	-	chr1_3:3922742-3922761	Msa0098040:intron	65.0%
	TAGGAGGGGAGGGGAGGGGA+GGG	+	chr1_3:3925898-3925917	None:intergenic	70.0%
	TTAGGAGGGGAGGGGAGGGG+AGG	+	chr1_3:3925899-3925918	None:intergenic	70.0%
	AGGAGGGGAGGGGAGGGGAG+GGG	+	chr1_3:3925897-3925916	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_3	gene	3921560	3931866	3921560	ID=Msa0098040;Name=Msa0098040
chr1_3	mRNA	3921560	3931866	3921560	ID=Msa0098040-mRNA-1;Parent=Msa0098040;Name=Msa0098040-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0\|1\|0.8\|1\|1\|1\|5\|608\|396
chr1_3	exon	3921560	3922371	3921560	ID=Msa0098040-mRNA-1:exon:1282;Parent=Msa0098040-mRNA-1
chr1_3	exon	3922960	3923216	3922960	ID=Msa0098040-mRNA-1:exon:1281;Parent=Msa0098040-mRNA-1
chr1_3	exon	3930663	3930795	3930663	ID=Msa0098040-mRNA-1:exon:1280;Parent=Msa0098040-mRNA-1
chr1_3	exon	3930996	3931118	3930996	ID=Msa0098040-mRNA-1:exon:1279;Parent=Msa0098040-mRNA-1
chr1_3	exon	3931393	3931866	3931393	ID=Msa0098040-mRNA-1:exon:1278;Parent=Msa0098040-mRNA-1
chr1_3	CDS	3931393	3931866	3931393	ID=Msa0098040-mRNA-1:cds;Parent=Msa0098040-mRNA-1
chr1_3	CDS	3930996	3931118	3930996	ID=Msa0098040-mRNA-1:cds;Parent=Msa0098040-mRNA-1
chr1_3	CDS	3930663	3930795	3930663	ID=Msa0098040-mRNA-1:cds;Parent=Msa0098040-mRNA-1
chr1_3	CDS	3922960	3923216	3922960	ID=Msa0098040-mRNA-1:cds;Parent=Msa0098040-mRNA-1
chr1_3	CDS	3922168	3922371	3922168	ID=Msa0098040-mRNA-1:cds;Parent=Msa0098040-mRNA-1
chr1_3	three_prime_UTR	3921560	3922167	3921560	ID=Msa0098040-mRNA-1:three_prime_utr;Parent=Msa0098040-mRNA-1

Gene Sequence

>Msa0098040

ATGGAGGAATACACTAATAATCCAAATCCAAATCCAAATCCAAATCCAAATCCAAATTCAAATCAAAGTTCAAGGCCAAATTTCTTGTACTCCATTGCTAGTGGAAACAACCAACACCAACACCAACACCAACACCAACACAATCATCAACATAATCAGATTCCAATGAACAACTTTCATCTTCAATCAAGTGGACCAGACAATTGTTTTCAACCTGATCAAGTACAACATCAACACTCTGCTGTGAAAACTGAAGCAAATAGTACTTCACAACTTCACACTCCGATTTTTCATTACCCAGCTTTAATGAGAACAAATATTATTCCACACACCAATATTATGCATAATCATCATCATCAAGGAGGAGGAGGGAGTCCAAGCAGTTCTAGTGGTGAAGCTGAAGCTATAAAAGCCAAAATCATTGCTCATCCTCAATACTCTAGTCTTTTACAAGCTTACATGGATTGTCAAAAGATTGGAGCTCCACCGGAAGTGGTGGCTCGTTTGGTTGCGTCTAGGCAAGAGTTTGAAGCAAGGCAAAGATCTTCAGTTAACTCAAGAGAAGCTTCTAAAGATCCAGAACTAGACCAATTCATGGAAGCATATTATGACATGCTTGTGAAGTATAGAGAGGAATTAACAAGGCCTATACAAGAGGCTATGGATTTCATGAGAAGAATAGAAACTCAGCTAAATACACTTTGCAATGGACCCCTTCGGATCTTCCCTGATGATAAAAATGAAGGCGTTGGTTCATCAGAAGAGGATCAAGAGAATAGTGGTGGAGAAACAGATCAACTTCCAGAGATTGATCCTCGAGCAGAAGACCGTGAATTGAAAAACCACTTGCTGAAGAAATATAGTGGTTACTTGAGTAGTCTTAAGCAAGAACTTTCCAAGAAGAAAAAGAAAGGAAAATTACCTAAAGAGGCTAGACAAAAGCTACTTAATTGGTGGGAATTGCATTACAAATGGCCTTATCCTTCGGAATCAGAGAAGGTAGCATTGGCTGAATCAACAGGTTTGGACCAGAAGCAAATAAATAACTGGTTCATCAATCAAAGGAAGAGGCACTGGAAACCATCAGAAGACATGCAGTTTATGGTGATGGATGGACTGCATCCACAGAGTGCAGCTCTTTATATGGATGGTCATTACATGGCTGATGGTCCCTACCGTTTAGGGCCATGA

Protein sequence

>Msa0098040

MEEYTNNPNPNPNPNPNPNSNQSSRPNFLYSIASGNNQHQHQHQHQHNHQHNQIPMNNFHLQSSGPDNCFQPDQVQHQHSAVKTEANSTSQLHTPIFHYPALMRTNIIPHTNIMHNHHHQGGGGSPSSSSGEAEAIKAKIIAHPQYSSLLQAYMDCQKIGAPPEVVARLVASRQEFEARQRSSVNSREASKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNTLCNGPLRIFPDDKNEGVGSSEEDQENSGGETDQLPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQSAALYMDGHYMADGPYRLGP*