Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0709380 | XP_013450091.1 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0709380 | sp|P42896|ENO_RICCO | 90.023 | 441 | 44 | 0 | 4 | 444 | 5 | 445 | 0.0 | 831 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0709380 | A0A072U338 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016440 | Msa0709380 | 0.829155 | 6.029917e-55 | -8.615850e-47 |
| Msa0042510 | Msa0709380 | 0.810638 | 1.043628e-50 | -8.615850e-47 |
| Msa0116600 | Msa0709380 | 0.803153 | 3.993754e-49 | -8.615850e-47 |
| Msa0621190 | Msa0709380 | 0.838775 | 2.353959e-57 | -8.615850e-47 |
| Msa0655970 | Msa0709380 | 0.808660 | 2.776304e-50 | -8.615850e-47 |
| Msa0709380 | Msa0812330 | 0.815176 | 1.057361e-51 | -8.615850e-47 |
| Msa0709380 | Msa0852620 | 0.806764 | 7.021662e-50 | -8.615850e-47 |
| Msa0709380 | Msa0880050 | 0.948917 | 3.634299e-107 | -8.615850e-47 |
| Msa0709380 | Msa0930360 | 0.839914 | 1.191097e-57 | -8.615850e-47 |
| Msa0709380 | Msa0930790 | 0.829765 | 4.285898e-55 | -8.615850e-47 |
| Msa0709380 | Msa1041830 | 0.987413 | 3.622792e-170 | -8.615850e-47 |
| Msa0709380 | Msa1124980 | 0.960429 | 1.511342e-118 | -8.615850e-47 |
| Msa0709380 | Msa1167360 | 0.953495 | 2.415927e-111 | -8.615850e-47 |
| Msa0709380 | Msa1387750 | 0.817311 | 3.522004e-52 | -8.615850e-47 |
| Msa0709380 | Msa1403520 | 0.804920 | 1.713627e-49 | -8.615850e-47 |
| Msa0709380 | Msa1423050 | 0.946874 | 2.002637e-105 | -8.615850e-47 |
| Msa0709380 | Msa1463510 | 0.880630 | 4.684926e-70 | -8.615850e-47 |
| Msa0709380 | Msa1465890 | 0.844070 | 9.491661e-59 | -8.615850e-47 |
| Msa0188740 | Msa0709380 | 0.819021 | 1.444982e-52 | -8.615850e-47 |
| Msa0192300 | Msa0709380 | 0.801153 | 1.029654e-48 | -8.615850e-47 |
| Msa0387290 | Msa0709380 | 0.857699 | 1.366467e-62 | -8.615850e-47 |
| Msa0477670 | Msa0709380 | 0.844083 | 9.414450e-59 | -8.615850e-47 |
| Msa0274940 | Msa0709380 | 0.814970 | 1.174346e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0709380 | MtrunA17_Chr7g0265741 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Msa0709380 | MtrunA17_Chr6g0476311 | 87.640 | 445 | 54 | 1 | 1 | 444 | 2 | 446 | 0.0 | 816 |
| Msa0709380 | MtrunA17_Chr2g0307671 | 68.182 | 440 | 128 | 7 | 2 | 440 | 63 | 491 | 0.0 | 602 |
| Msa0709380 | MtrunA17_Chr5g0447301 | 60.268 | 224 | 81 | 4 | 2 | 224 | 45 | 261 | 1.07e-84 | 261 |
| Msa0709380 | MtrunA17_Chr5g0447311 | 59.155 | 213 | 84 | 3 | 226 | 438 | 19 | 228 | 8.35e-84 | 256 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0709380 | AT2G36530.1 | 89.189 | 444 | 48 | 0 | 1 | 444 | 1 | 444 | 0.0 | 821 |
| Msa0709380 | AT2G36530.2 | 89.336 | 422 | 45 | 0 | 23 | 444 | 12 | 433 | 0.0 | 780 |
| Msa0709380 | AT1G74030.1 | 67.352 | 438 | 131 | 6 | 4 | 440 | 51 | 477 | 0.0 | 599 |
| Msa0709380 | AT2G29560.1 | 57.763 | 438 | 174 | 7 | 2 | 438 | 45 | 472 | 1.83e-175 | 500 |
Find 165 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCATATGCAGGAGTTTA+TGG | 0.174723 | 5_1:+533771 | Msa0709380:intron |
| TAATTAGACGTCATAAAATT+TGG | 0.221935 | 5_1:+536431 | Msa0709380:three_prime_UTR |
| AAACAACAGGTCAACCAAAT+TGG | 0.247163 | 5_1:+535434 | Msa0709380:intron |
| GTTACTACTCAACTGAAAAT+TGG | 0.253970 | 5_1:-536282 | None:intergenic |
| TCTCAGTCACGGATCCAATT+TGG | 0.266564 | 5_1:-535448 | None:intergenic |
| AAATATGTGGTTGGGTGTTT+AGG | 0.286685 | 5_1:+536650 | Msa0709380:three_prime_UTR |
| ATAAAATTTGGTCATGCATT+AGG | 0.291097 | 5_1:+536443 | Msa0709380:three_prime_UTR |
| CCCGCTTTCAATGTGATTAA+TGG | 0.296494 | 5_1:+533644 | Msa0709380:CDS |
| TGCAAGAGACACTGCTAATA+TGG | 0.297215 | 5_1:-533171 | None:intergenic |
| GGGTCTCAGACACCTGCTTA+TGG | 0.300267 | 5_1:-531366 | None:intergenic |
| CACTTTCAAAGCTTCTAGTA+TGG | 0.308227 | 5_1:-536022 | None:intergenic |
| TCAATTTCTGTCTGCTGAGT+TGG | 0.308960 | 5_1:-532978 | None:intergenic |
| CCTTGTATAGAGGAATCTTT+AGG | 0.321207 | 5_1:-533217 | None:intergenic |
| GGATCCTCAATTGAAACAAT+TGG | 0.323273 | 5_1:-535078 | None:intergenic |
| GACTTCCACACCCATCTTCA+TGG | 0.331030 | 5_1:-533827 | None:intergenic |
| TTAGTTTGAGCAATGAGATT+TGG | 0.336977 | 5_1:+536065 | Msa0709380:three_prime_UTR |
| TACGATAAACAAATTAGATT+TGG | 0.337185 | 5_1:+536695 | Msa0709380:three_prime_UTR |
| ACTTTACTCCACCGGTTGCT+TGG | 0.345294 | 5_1:+536394 | Msa0709380:three_prime_UTR |
| TAATGTTCTTAGGTTGTCAT+TGG | 0.357703 | 5_1:+534376 | Msa0709380:intron |
| CTTTACTCCACCGGTTGCTT+GGG | 0.361693 | 5_1:+536395 | Msa0709380:three_prime_UTR |
| TCAGGAAAACAAGGAAGGTT+TGG | 0.362760 | 5_1:+534223 | Msa0709380:CDS |
| GTCAGCCCCATAAAATAAAA+AGG | 0.371324 | 5_1:-536179 | None:intergenic |
| CAATTTCTGTCTGCTGAGTT+GGG | 0.375682 | 5_1:-532977 | None:intergenic |
| CAAAACCAAGTTCTTGTTAC+CGG | 0.376652 | 5_1:-533615 | None:intergenic |
| AAAGATCTGACGGGCCTTGA+TGG | 0.379603 | 5_1:-531486 | None:intergenic |
| AGCTTCTAGTATGGCTCGAC+AGG | 0.381624 | 5_1:-536013 | None:intergenic |
| TTAAGACCGGAGCACCTTGC+AGG | 0.385327 | 5_1:+535804 | Msa0709380:CDS |
| TGTTGGAGCCTCCTCTTTCA+AGG | 0.388440 | 5_1:+533801 | Msa0709380:CDS |
| GACAGAAATTGACAACTTCA+TGG | 0.389489 | 5_1:+532989 | Msa0709380:CDS |
| TCAAACTAAGGTTGGTTATC+CGG | 0.395194 | 5_1:-536051 | None:intergenic |
| GACGGCTCACAGAAGATATC+TGG | 0.395388 | 5_1:+535012 | Msa0709380:CDS |
| ACCTGAGGCTCGGTGGTAGA+TGG | 0.398239 | 5_1:-536474 | None:intergenic |
| ATCATACGATTTGAACTTCA+AGG | 0.407971 | 5_1:+534438 | Msa0709380:CDS |
| GCTAAGATGACCGGTGAGAT+TGG | 0.409902 | 5_1:+535129 | Msa0709380:CDS |
| AGCCGTCAGGATGTCCAAAA+AGG | 0.410162 | 5_1:+535478 | Msa0709380:CDS |
| GGTCTCAGACACCTGCTTAT+GGG | 0.420775 | 5_1:-531365 | None:intergenic |
| CAGCATATTGCAAACATTGC+CGG | 0.421071 | 5_1:+533596 | Msa0709380:intron |
| TTCATTGCTGATCTTGCTGT+TGG | 0.424087 | 5_1:+535668 | Msa0709380:CDS |
| TGACGGAACTGTTAATGAAT+GGG | 0.427486 | 5_1:+533022 | Msa0709380:CDS |
| GCAACCGGTGGAGTAAAGTT+TGG | 0.427490 | 5_1:-536390 | None:intergenic |
| CTCTGACCTGCAAGGTGCTC+CGG | 0.431664 | 5_1:-535810 | None:intergenic |
| CATTGCCGGTAACAAGAACT+TGG | 0.438486 | 5_1:+533610 | Msa0709380:CDS |
| GGTGCTGAAGCAGTGTATGC+TGG | 0.440630 | 5_1:+535974 | Msa0709380:CDS |
| GTACCCAATTGTTTCAATTG+AGG | 0.440774 | 5_1:+535074 | Msa0709380:CDS |
| AAATCTCATTGCTCAAACTA+AGG | 0.442849 | 5_1:-536063 | None:intergenic |
| CTCATTGCTCAAACTAAGGT+TGG | 0.443078 | 5_1:-536059 | None:intergenic |
| AACACTAACCTGGTTGTACT+TGG | 0.444307 | 5_1:-535840 | None:intergenic |
| ATCACATTGAAAGCGGGAAC+AGG | 0.450874 | 5_1:-533638 | None:intergenic |
| TCTCTTGCAGTGTGCAAAGC+TGG | 0.451916 | 5_1:+533185 | Msa0709380:CDS |
| ACCATCTACCACCGAGCCTC+AGG | 0.453494 | 5_1:+536473 | Msa0709380:three_prime_UTR |
| GATCCTCAATTGAAACAATT+GGG | 0.460561 | 5_1:-535077 | None:intergenic |
| ACTCCACCGGTTGCTTGGGT+TGG | 0.461300 | 5_1:+536399 | Msa0709380:three_prime_UTR |
| GAGTTTATGGTTCTTCCTGT+TGG | 0.470295 | 5_1:+533784 | Msa0709380:CDS |
| TTGAAAGAGGAGGCTCCAAC+AGG | 0.471503 | 5_1:-533799 | None:intergenic |
| CTTCATGGCTTCCTTGAAAG+AGG | 0.475418 | 5_1:-533812 | None:intergenic |
| TCACATCGATTTCTTCTCCA+TGG | 0.477736 | 5_1:+531451 | Msa0709380:exon |
| TCCCAGTCATCCTGGTCAAA+AGG | 0.478242 | 5_1:-535099 | None:intergenic |
| GATGGAGGATCTGACTATCT+TGG | 0.478515 | 5_1:+532142 | Msa0709380:CDS |
| AGGAAACAAACTTGCAATGC+AGG | 0.487451 | 5_1:+533679 | Msa0709380:CDS |
| TTGACGGAACTGTTAATGAA+TGG | 0.488553 | 5_1:+533021 | Msa0709380:CDS |
| GTTCCTAGTGGTGCATCCAC+TGG | 0.489788 | 5_1:+531695 | Msa0709380:CDS |
| TTCATGGTTCAGAAGCTTGA+CGG | 0.490896 | 5_1:+533005 | Msa0709380:CDS |
| CATAGTGCTCCCAGTCATCC+TGG | 0.492578 | 5_1:-535107 | None:intergenic |
| ACCGTATAAAATATGTGGTT+GGG | 0.493409 | 5_1:+536642 | Msa0709380:three_prime_UTR |
| GGAACCAATGTACAAATTGT+TGG | 0.493520 | 5_1:+535150 | Msa0709380:CDS |
| CACCGTATAAAATATGTGGT+TGG | 0.494907 | 5_1:+536641 | Msa0709380:three_prime_UTR |
| AATTGTTGGTGATGATCTCT+TGG | 0.498883 | 5_1:+535164 | Msa0709380:CDS |
| GCTGTGATTAAGAAGAAATA+TGG | 0.499581 | 5_1:+534152 | Msa0709380:CDS |
| ATCACCAACAATTTGTACAT+TGG | 0.504433 | 5_1:-535154 | None:intergenic |
| AACAGCAAGATCAGCAATGA+AGG | 0.504723 | 5_1:-535666 | None:intergenic |
| ATATAGCCAACCCAAGCAAC+CGG | 0.504740 | 5_1:-536405 | None:intergenic |
| GGGGCTGACAAGTTATCCCC+TGG | 0.506892 | 5_1:+536193 | Msa0709380:three_prime_UTR |
| CTGAGAGTATTGAAGCCGTC+AGG | 0.511646 | 5_1:+535465 | Msa0709380:CDS |
| AAGTTCAAACCTTCTGTGGC+TGG | 0.511692 | 5_1:-535519 | None:intergenic |
| CATACCTTGCCGATCAATGC+TGG | 0.514212 | 5_1:-532776 | None:intergenic |
| TTGAGAATTGAGGAGGAGCT+TGG | 0.514397 | 5_1:+535953 | Msa0709380:CDS |
| GCAGTAAATGTTGGTGATGA+AGG | 0.515363 | 5_1:+534182 | Msa0709380:CDS |
| TTCTTAGGTTGTCATTGGAA+TGG | 0.517609 | 5_1:+534381 | Msa0709380:intron |
| GATCAATGCTGGTGCAATGA+TGG | 0.520209 | 5_1:-532765 | None:intergenic |
| ACTATAAATAACCCATAAGC+AGG | 0.523830 | 5_1:+531354 | Msa0709380:five_prime_UTR |
| TTTCAAGGAAGCCATGAAGA+TGG | 0.524759 | 5_1:+533816 | Msa0709380:CDS |
| TACATTGGTTCCAATCTCAC+CGG | 0.526389 | 5_1:-535139 | None:intergenic |
| TTGGCAGCTATTGAGAATTG+AGG | 0.528228 | 5_1:+535943 | Msa0709380:intron |
| AAAAGAAGCGAGAGTTGATA+GGG | 0.529115 | 5_1:+531331 | Msa0709380:five_prime_UTR |
| GGATAAATTACCTTGTATAG+AGG | 0.532813 | 5_1:-533227 | None:intergenic |
| CCTAAAGATTCCTCTATACA+AGG | 0.534980 | 5_1:+533217 | Msa0709380:CDS |
| AGCGAAAGTACCATCGGATA+CGG | 0.536390 | 5_1:-531663 | None:intergenic |
| AAGTCCGCCATTGACAAAGC+TGG | 0.537931 | 5_1:+534254 | Msa0709380:CDS |
| TGCAGCTTCTGAGTTCTACA+AGG | 0.538609 | 5_1:+534408 | Msa0709380:CDS |
| ATTGGAACGACATTGAAAGT+AGG | 0.539332 | 5_1:-536264 | None:intergenic |
| CAACTTAAGCAATCGTGAAG+AGG | 0.545215 | 5_1:-536541 | None:intergenic |
| GGTGTAACCAGCTTTGTCAA+TGG | 0.547964 | 5_1:-534261 | None:intergenic |
| GCAACCAAACTTTACTCCAC+CGG | 0.548449 | 5_1:+536386 | Msa0709380:three_prime_UTR |
| TTCAAGGAAGCCATGAAGAT+GGG | 0.550371 | 5_1:+533817 | Msa0709380:CDS |
| ATCATTGCACCAGCATTGAT+CGG | 0.553718 | 5_1:+532767 | Msa0709380:CDS |
| CCCCAACATTCAGGAAAACA+AGG | 0.562910 | 5_1:+534214 | Msa0709380:CDS |
| GAGGCTCTTGAGTTAAGAGA+TGG | 0.564582 | 5_1:+532124 | Msa0709380:CDS |
| GGCTGCTATTACCTCCATCA+AGG | 0.566953 | 5_1:+531472 | Msa0709380:CDS |
| GCTTTCAATGTGATTAATGG+TGG | 0.568679 | 5_1:+533647 | Msa0709380:CDS |
| CATACTAGAAGCTTTGAAAG+TGG | 0.569484 | 5_1:+536023 | Msa0709380:exon |
| GGAAGCCATGAAGATGGGTG+TGG | 0.573653 | 5_1:+533822 | Msa0709380:CDS |
| TCTTGGCAAGGGTGTATCAA+AGG | 0.577692 | 5_1:+532159 | Msa0709380:CDS |
| CAGACACCGTATAAAATATG+TGG | 0.578912 | 5_1:+536637 | Msa0709380:three_prime_UTR |
| AGTATGGCTCGACAGGGGTA+CGG | 0.579765 | 5_1:-536006 | None:intergenic |
| GTGTCCACAGAGAGTTCAGA+AGG | 0.580306 | 5_1:+535281 | Msa0709380:intron |
| TCTTGCTGTTGGTTTGTCAA+CGG | 0.581023 | 5_1:+535679 | Msa0709380:CDS |
| TAATATACAGACCTTGGGGT+TGG | 0.582575 | 5_1:-535190 | None:intergenic |
| AGACACTGCTAATATGGCAT+TGG | 0.587574 | 5_1:-533165 | None:intergenic |
| GATGGAGGTAATAGCAGCCA+TGG | 0.587616 | 5_1:-531468 | None:intergenic |
| AACATTCAGGAAAACAAGGA+AGG | 0.590478 | 5_1:+534218 | Msa0709380:CDS |
| CTGAAAAGAGAACTGTATTG+TGG | 0.590789 | 5_1:+536598 | Msa0709380:three_prime_UTR |
| CATGGCTTCCTTGAAAGAGG+AGG | 0.591923 | 5_1:-533809 | None:intergenic |
| CCATTAATCACATTGAAAGC+GGG | 0.594481 | 5_1:-533644 | None:intergenic |
| ATTAATGGTGGATCACATGC+AGG | 0.595757 | 5_1:+533659 | Msa0709380:CDS |
| GAACAGGGTCAAATTAAGAC+CGG | 0.596686 | 5_1:+535791 | Msa0709380:intron |
| CGTCAGATCTTTGACAGTCG+TGG | 0.597878 | 5_1:+531497 | Msa0709380:CDS |
| AGGATCTGACTATCTTGGCA+AGG | 0.598318 | 5_1:+532147 | Msa0709380:CDS |
| TGAAGACGAACCTCGACGGT+AGG | 0.599041 | 5_1:-531524 | None:intergenic |
| AAGCAATAAAACCTGAGGCT+CGG | 0.599744 | 5_1:-536484 | None:intergenic |
| GTGTCATGACCAGCCACAGA+AGG | 0.602021 | 5_1:+535510 | Msa0709380:CDS |
| CACGACTGTCAAAGATCTGA+CGG | 0.602120 | 5_1:-531496 | None:intergenic |
| GCAAGACGCTCTGACCTGCA+AGG | 0.602568 | 5_1:-535818 | None:intergenic |
| GGATCTGACTATCTTGGCAA+GGG | 0.603603 | 5_1:+532148 | Msa0709380:CDS |
| ACGACTGTCAAAGATCTGAC+GGG | 0.605306 | 5_1:-531495 | None:intergenic |
| ATGGGGTTGGTGCAAACAAA+AGG | 0.606880 | 5_1:+533040 | Msa0709380:CDS |
| ACCATTAATCACATTGAAAG+CGG | 0.610449 | 5_1:-533645 | None:intergenic |
| GCTTCTAGTATGGCTCGACA+GGG | 0.610899 | 5_1:-536012 | None:intergenic |
| GACAAAGTTCAAACCTTCTG+TGG | 0.611804 | 5_1:-535523 | None:intergenic |
| AGCTCTAGCGAAAGTACCAT+CGG | 0.612079 | 5_1:-531669 | None:intergenic |
| GCTAGAGCTGCTGTTCCTAG+TGG | 0.613085 | 5_1:+531683 | Msa0709380:CDS |
| GAGCACTATGCTAAGATGAC+CGG | 0.616214 | 5_1:+535120 | Msa0709380:CDS |
| GATCTGACGGGCCTTGATGG+AGG | 0.617525 | 5_1:-531483 | None:intergenic |
| TTTGTTGTATACGTAGCCAG+TGG | 0.625526 | 5_1:-536362 | None:intergenic |
| ATTGACAAAGCTGGTTACAC+CGG | 0.627043 | 5_1:+534263 | Msa0709380:CDS |
| ATACCAGTGGATGCACCACT+AGG | 0.628478 | 5_1:-531698 | None:intergenic |
| GATGCAAACCGACCTTCAGA+TGG | 0.629057 | 5_1:-533855 | None:intergenic |
| CAATAAAACCTGAGGCTCGG+TGG | 0.630433 | 5_1:-536481 | None:intergenic |
| GCTCTTGAGTTAAGAGATGG+AGG | 0.631055 | 5_1:+532127 | Msa0709380:CDS |
| TGTTTGCAGTGGAGAGACTG+AGG | 0.633750 | 5_1:+535640 | Msa0709380:intron |
| CTAATTATTAGGTATTTACG+AGG | 0.636389 | 5_1:+532105 | Msa0709380:intron |
| TTGTTGTATACGTAGCCAGT+GGG | 0.637900 | 5_1:-536361 | None:intergenic |
| GGCTTCAATACTCTCAGTCA+CGG | 0.640921 | 5_1:-535459 | None:intergenic |
| TGCACCAGCATTGATCGGCA+AGG | 0.641409 | 5_1:+532772 | Msa0709380:CDS |
| GCAGCTATTGAGAATTGAGG+AGG | 0.642636 | 5_1:+535946 | Msa0709380:intron |
| GAAGTGAAGACGAACCTCGA+CGG | 0.646889 | 5_1:-531528 | None:intergenic |
| TCAAAAGTATCACTACCCAC+TGG | 0.647418 | 5_1:+536346 | Msa0709380:three_prime_UTR |
| GGTCAAGATGCAGTAAATGT+TGG | 0.647677 | 5_1:+534173 | Msa0709380:CDS |
| GCGTCTTGCCAAGTACAACC+AGG | 0.651331 | 5_1:+535832 | Msa0709380:CDS |
| TAGCCAACCCAAGCAACCGG+TGG | 0.655770 | 5_1:-536402 | None:intergenic |
| TGAGCAATGAGATTTGGCTG+CGG | 0.657198 | 5_1:+536071 | Msa0709380:three_prime_UTR |
| GGAAGTCTATCACCATCTGA+AGG | 0.660829 | 5_1:+533843 | Msa0709380:CDS |
| TGCAATGATGGTGTTCACGT+TGG | 0.669626 | 5_1:-532753 | None:intergenic |
| GTAACCAGCTTTGTCAATGG+CGG | 0.670465 | 5_1:-534258 | None:intergenic |
| TCTCTTGGTTACCAACCCCA+AGG | 0.674267 | 5_1:+535179 | Msa0709380:CDS |
| GAACTGTTAATGAATGGGGT+TGG | 0.674740 | 5_1:+533027 | Msa0709380:CDS |
| TTGTAAAGACAGATGCGTTG+TGG | 0.674792 | 5_1:+536561 | Msa0709380:three_prime_UTR |
| GTTGATATAACCGTATCCGA+TGG | 0.679936 | 5_1:+531653 | Msa0709380:CDS |
| AGTTCAAGCAATAAAACCTG+AGG | 0.680048 | 5_1:-536489 | None:intergenic |
| CTCACAGAAGATATCTGGAG+AGG | 0.680128 | 5_1:+535017 | Msa0709380:CDS |
| GACGGAACTGTTAATGAATG+GGG | 0.691515 | 5_1:+533023 | Msa0709380:CDS |
| GTAAATGTTGGTGATGAAGG+TGG | 0.697402 | 5_1:+534185 | Msa0709380:CDS |
| TCGTGGCAATCCTACCGTCG+AGG | 0.699567 | 5_1:+531514 | Msa0709380:CDS |
| AGCTTCTGAGTTCTACAAGG+AGG | 0.702282 | 5_1:+534411 | Msa0709380:CDS |
| TTGACAATCCAGAACAACGA+CGG | 0.703661 | 5_1:+534994 | Msa0709380:intron |
| CTTCTAGTATGGCTCGACAG+GGG | 0.721455 | 5_1:-536011 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTCAAAAATAAAATTAAA+CGG | - | chr5_1:532086-532105 | None:intergenic | 10.0% |
| !!! | TATTTTTGAAACTAATTATT+AGG | + | chr5_1:532094-532113 | Msa0709380:intron | 10.0% |
| !! | AGTTGTATATATAAATAAAA+TGG | - | chr5_1:534790-534809 | None:intergenic | 10.0% |
| !!! | ATGAATTTTTTTTATTCTTT+TGG | + | chr5_1:535214-535233 | Msa0709380:intron | 10.0% |
| !!! | TGAATTTTTTTTATTCTTTT+GGG | + | chr5_1:535215-535234 | Msa0709380:intron | 10.0% |
| !! | AATCTGATTATGATTATTAT+AGG | + | chr5_1:531631-531650 | Msa0709380:intron | 15.0% |
| !!! | TTTTTGTGTGTTAATTATTA+TGG | + | chr5_1:531777-531796 | Msa0709380:intron | 15.0% |
| !! | TTGAAAATCATCATAAATAA+CGG | - | chr5_1:531829-531848 | None:intergenic | 15.0% |
| !!! | TAATAACTTGATATATCTTT+TGG | - | chr5_1:532322-532341 | None:intergenic | 15.0% |
| !!! | GTATTCATCTAATATTTTTT+TGG | + | chr5_1:533355-533374 | Msa0709380:intron | 15.0% |
| !!! | TCTAATATTTTTTTGGTATT+CGG | + | chr5_1:533362-533381 | Msa0709380:intron | 15.0% |
| !! | ATAAAAAGGTCAAAATTTAT+TGG | - | chr5_1:536168-536187 | None:intergenic | 15.0% |
| !!! | ATTTTGACCTTTTTATTTTA+TGG | + | chr5_1:536172-536191 | Msa0709380:three_prime_UTR | 15.0% |
| !!! | TTTTGACCTTTTTATTTTAT+GGG | + | chr5_1:536173-536192 | Msa0709380:three_prime_UTR | 15.0% |
| !!! | TTTTCATCAATTCTATTTTG+TGG | + | chr5_1:531736-531755 | Msa0709380:intron | 20.0% |
| !! | GAAATCTACTTAAATATCTA+TGG | - | chr5_1:532005-532024 | None:intergenic | 20.0% |
| !! | TTAAGAAACAGAAAATATGA+TGG | - | chr5_1:532196-532215 | None:intergenic | 20.0% |
| !! | AAATAGAACGAAATGAAAAT+AGG | - | chr5_1:532393-532412 | None:intergenic | 20.0% |
| !!! | GTCTTTTATTTTGTCTTTTT+TGG | + | chr5_1:532413-532432 | Msa0709380:intron | 20.0% |
| !!! | TTTATTTTGTCTTTTTTGGA+AGG | + | chr5_1:532417-532436 | Msa0709380:intron | 20.0% |
| !! | ACCAAAAAAAAAATGAAACA+AGG | - | chr5_1:532578-532597 | None:intergenic | 20.0% |
| !! | ATGATAAAAAAAACTGTCAT+CGG | - | chr5_1:532848-532867 | None:intergenic | 20.0% |
| !! | TCACTTAACTATACTATAAT+GGG | - | chr5_1:532874-532893 | None:intergenic | 20.0% |
| !! | TTCACTTAACTATACTATAA+TGG | - | chr5_1:532875-532894 | None:intergenic | 20.0% |
| !! | AAAATTAATTCCATTACTAG+AGG | + | chr5_1:532913-532932 | Msa0709380:intron | 20.0% |
| !!! | AAAATTTAGATAATGCCTTT+TGG | - | chr5_1:533900-533919 | None:intergenic | 20.0% |
| !!! | AGATTTGTTTCATATTATTG+AGG | - | chr5_1:533929-533948 | None:intergenic | 20.0% |
| !!! | ACATTTTGTATAATGTTCTT+AGG | + | chr5_1:534366-534385 | Msa0709380:intron | 20.0% |
| !! | TATAAATAAAATGGCTAACA+AGG | - | chr5_1:534781-534800 | None:intergenic | 20.0% |
| !! | TATATATACAACTTGAAAGA+TGG | + | chr5_1:534797-534816 | Msa0709380:intron | 20.0% |
| !! | TACAAATTAATATACGACAT+TGG | + | chr5_1:534872-534891 | Msa0709380:intron | 20.0% |
| !!! | TCAACATAAATGTTTTTTTG+AGG | - | chr5_1:534939-534958 | None:intergenic | 20.0% |
| !! | AAAAGGAAACGTTATTATAT+TGG | - | chr5_1:535756-535775 | None:intergenic | 20.0% |
| !!! | TTTGACCTTTTTATTTTATG+GGG | + | chr5_1:536174-536193 | Msa0709380:three_prime_UTR | 20.0% |
| !! | TAATTAGACGTCATAAAATT+TGG | + | chr5_1:536431-536450 | Msa0709380:three_prime_UTR | 20.0% |
| !! | TACGATAAACAAATTAGATT+TGG | + | chr5_1:536695-536714 | Msa0709380:three_prime_UTR | 20.0% |
| ! | CTAATTATTAGGTATTTACG+AGG | + | chr5_1:532105-532124 | Msa0709380:intron | 25.0% |
| !! | AAAGTATTTCTCCTAATGAA+GGG | - | chr5_1:532258-532277 | None:intergenic | 25.0% |
| !!! | AAAAGTATTTCTCCTAATGA+AGG | - | chr5_1:532259-532278 | None:intergenic | 25.0% |
| !!! | TTGTGCTTTAGATTTCTTTT+TGG | + | chr5_1:532356-532375 | Msa0709380:intron | 25.0% |
| ! | TTTCCATTCCTTCATAAAAT+AGG | - | chr5_1:532461-532480 | None:intergenic | 25.0% |
| !! | TGGTAGTTTTCTAATCATAA+AGG | - | chr5_1:532489-532508 | None:intergenic | 25.0% |
| ! | TATGATTAGAAAACTACCAA+TGG | + | chr5_1:532490-532509 | Msa0709380:intron | 25.0% |
| ! | TTGAGAAAAGAAATGAATGA+AGG | - | chr5_1:532527-532546 | None:intergenic | 25.0% |
| ! | AAAAAAAAATGAAACAAGGC+AGG | - | chr5_1:532574-532593 | None:intergenic | 25.0% |
| !!! | GCCTTGTTTCATTTTTTTTT+TGG | + | chr5_1:532574-532593 | Msa0709380:intron | 25.0% |
| !!! | TATTCTCACCTGATTTTTTT+TGG | + | chr5_1:532714-532733 | Msa0709380:intron | 25.0% |
| !! | TATTACATTAGTGTTTTCTC+TGG | + | chr5_1:532809-532828 | Msa0709380:intron | 25.0% |
| ! | CACTTAACTATACTATAATG+GGG | - | chr5_1:532873-532892 | None:intergenic | 25.0% |
| ! | AAAAAACAATCAGAACTAGA+AGG | - | chr5_1:533124-533143 | None:intergenic | 25.0% |
| !!! | TTCTAGTTCTGATTGTTTTT+TGG | + | chr5_1:533123-533142 | Msa0709380:intron | 25.0% |
| !!! | TTCTGATTGTTTTTTGGTTT+TGG | + | chr5_1:533129-533148 | Msa0709380:intron | 25.0% |
| ! | TGGTACTTAACTGTATTTAA+AGG | + | chr5_1:533258-533277 | Msa0709380:intron | 25.0% |
| ! | AATGGACATAAAAGAAAACT+GGG | - | chr5_1:533514-533533 | None:intergenic | 25.0% |
| ! | AAATGGACATAAAAGAAAAC+TGG | - | chr5_1:533515-533534 | None:intergenic | 25.0% |
| ! | AAACGACTCAACTAAAAAAA+TGG | - | chr5_1:533532-533551 | None:intergenic | 25.0% |
| !!! | TGTTTTTTACCAGTAATAAG+CGG | + | chr5_1:533974-533993 | Msa0709380:intron | 25.0% |
| !! | CTCTATTCAATTTTCTGTTT+CGG | + | chr5_1:534304-534323 | Msa0709380:intron | 25.0% |
| !! | AATTTTCTGTTTCGGTTATT+TGG | + | chr5_1:534312-534331 | Msa0709380:intron | 25.0% |
| ! | TTCTCAGATTTATTCATTTG+AGG | + | chr5_1:534336-534355 | Msa0709380:intron | 25.0% |
| ! | TCTCAGATTTATTCATTTGA+GGG | + | chr5_1:534337-534356 | Msa0709380:intron | 25.0% |
| !! | AACAATAGAAACAGTTCTTT+TGG | + | chr5_1:534678-534697 | Msa0709380:intron | 25.0% |
| ! | ATTCTTAACCCTTCTTAAAA+AGG | - | chr5_1:534732-534751 | None:intergenic | 25.0% |
| ! | TCATATAATATACAGACCTT+GGG | - | chr5_1:535198-535217 | None:intergenic | 25.0% |
| ! | TTCATATAATATACAGACCT+TGG | - | chr5_1:535199-535218 | None:intergenic | 25.0% |
| ! | ATCAATACATTTATCTACCT+AGG | - | chr5_1:535392-535411 | None:intergenic | 25.0% |
| ! | CAACTGTAAGATATTTAACA+AGG | + | chr5_1:535581-535600 | Msa0709380:intron | 25.0% |
| !!! | TCATATATTTTTGTTTGCAG+TGG | + | chr5_1:535629-535648 | Msa0709380:intron | 25.0% |
| ! | AACGTTATTATATTGGACAT+GGG | - | chr5_1:535749-535768 | None:intergenic | 25.0% |
| ! | AAACGTTATTATATTGGACA+TGG | - | chr5_1:535750-535769 | None:intergenic | 25.0% |
| ! | TCAAGATACGATTAACAAAA+AGG | - | chr5_1:535773-535792 | None:intergenic | 25.0% |
| !! | TTTGTTGATTACATTTGCTT+CGG | + | chr5_1:535861-535880 | Msa0709380:intron | 25.0% |
| ! | ATAAAATTTGGTCATGCATT+AGG | + | chr5_1:536443-536462 | Msa0709380:three_prime_UTR | 25.0% |
| ACTATAAATAACCCATAAGC+AGG | + | chr5_1:531354-531373 | Msa0709380:five_prime_UTR | 30.0% | |
| ! | AGATTTCGTAGATTTTACTC+TGG | + | chr5_1:532018-532037 | Msa0709380:intron | 30.0% |
| ! | CTCAACTACCTATTTTATGA+AGG | + | chr5_1:532450-532469 | Msa0709380:intron | 30.0% |
| ! | CTACCTATTTTATGAAGGAA+TGG | + | chr5_1:532455-532474 | Msa0709380:intron | 30.0% |
| TACTGCATAAAAAAGTGAGA+TGG | + | chr5_1:532649-532668 | Msa0709380:intron | 30.0% | |
| GGATAAATTACCTTGTATAG+AGG | - | chr5_1:533230-533249 | None:intergenic | 30.0% | |
| ATGGACATAAAAGAAAACTG+GGG | - | chr5_1:533513-533532 | None:intergenic | 30.0% | |
| ACCATTAATCACATTGAAAG+CGG | - | chr5_1:533648-533667 | None:intergenic | 30.0% | |
| TACTGGTAAAAAACAAAGCT+TGG | - | chr5_1:533969-533988 | None:intergenic | 30.0% | |
| !!! | GTTTTTTACCAGTAATAAGC+GGG | + | chr5_1:533975-533994 | Msa0709380:intron | 30.0% |
| GCTGTGATTAAGAAGAAATA+TGG | + | chr5_1:534152-534171 | Msa0709380:CDS | 30.0% | |
| CGAAACAGAAAATTGAATAG+AGG | - | chr5_1:534306-534325 | None:intergenic | 30.0% | |
| ! | TAATGTTCTTAGGTTGTCAT+TGG | + | chr5_1:534376-534395 | Msa0709380:intron | 30.0% |
| ATCATACGATTTGAACTTCA+AGG | + | chr5_1:534438-534457 | Msa0709380:CDS | 30.0% | |
| TAATAACAACTCTGGTACTA+AGG | - | chr5_1:534646-534665 | None:intergenic | 30.0% | |
| !! | AATATCCGTCCTTTTTAAGA+AGG | + | chr5_1:534720-534739 | Msa0709380:intron | 30.0% |
| !! | ATATCCGTCCTTTTTAAGAA+GGG | + | chr5_1:534721-534740 | Msa0709380:intron | 30.0% |
| TTAACCCTTCTTAAAAAGGA+CGG | - | chr5_1:534728-534747 | None:intergenic | 30.0% | |
| GATCCTCAATTGAAACAATT+GGG | - | chr5_1:535080-535099 | None:intergenic | 30.0% | |
| ATCACCAACAATTTGTACAT+TGG | - | chr5_1:535157-535176 | None:intergenic | 30.0% | |
| CATATAATATACAGACCTTG+GGG | - | chr5_1:535197-535216 | None:intergenic | 30.0% | |
| !! | TCAAGGTACTCTCATTTTAT+TGG | + | chr5_1:535337-535356 | Msa0709380:intron | 30.0% |
| ! | CTTGACATATTTGAAACAAC+AGG | + | chr5_1:535421-535440 | Msa0709380:intron | 30.0% |
| ACAATTGTTGAACTGAGATA+AGG | - | chr5_1:535710-535729 | None:intergenic | 30.0% | |
| TTGTTAATCGTATCTTGAAC+AGG | + | chr5_1:535775-535794 | Msa0709380:intron | 30.0% | |
| TGTTAATCGTATCTTGAACA+GGG | + | chr5_1:535776-535795 | Msa0709380:intron | 30.0% | |
| AAATCTCATTGCTCAAACTA+AGG | - | chr5_1:536066-536085 | None:intergenic | 30.0% | |
| ! | TTAGTTTGAGCAATGAGATT+TGG | + | chr5_1:536065-536084 | Msa0709380:three_prime_UTR | 30.0% |
| ! | ACACAACTTTAAAAATCCAG+GGG | - | chr5_1:536212-536231 | None:intergenic | 30.0% |
| ! | CACACAACTTTAAAAATCCA+GGG | - | chr5_1:536213-536232 | None:intergenic | 30.0% |
| GTTACTACTCAACTGAAAAT+TGG | - | chr5_1:536285-536304 | None:intergenic | 30.0% | |
| ! | TGAGTAGTAACGATTTTTGT+TGG | + | chr5_1:536294-536313 | Msa0709380:three_prime_UTR | 30.0% |
| ACCGTATAAAATATGTGGTT+GGG | + | chr5_1:536642-536661 | Msa0709380:three_prime_UTR | 30.0% | |
| ! | ACCCAACCACATATTTTATA+CGG | - | chr5_1:536646-536665 | None:intergenic | 30.0% |
| !! | AAAAGAAGCGAGAGTTGATA+GGG | + | chr5_1:531331-531350 | Msa0709380:five_prime_UTR | 35.0% |
| !! | AGATTTTACTCTGGTACTGA+TGG | + | chr5_1:532027-532046 | Msa0709380:intron | 35.0% |
| TTCCAGTTATACCCTTCATT+AGG | + | chr5_1:532244-532263 | Msa0709380:intron | 35.0% | |
| ATCACAATGACCTCTAGTAA+TGG | - | chr5_1:532926-532945 | None:intergenic | 35.0% | |
| GACAGAAATTGACAACTTCA+TGG | + | chr5_1:532989-533008 | Msa0709380:CDS | 35.0% | |
| TTGACGGAACTGTTAATGAA+TGG | + | chr5_1:533021-533040 | Msa0709380:CDS | 35.0% | |
| TGACGGAACTGTTAATGAAT+GGG | + | chr5_1:533022-533041 | Msa0709380:CDS | 35.0% | |
| TGTGATAGATTACGATCTAC+AGG | - | chr5_1:533082-533101 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTTTGGTTTCAGCT+TGG | + | chr5_1:533140-533159 | Msa0709380:intron | 35.0% |
| CCTTGTATAGAGGAATCTTT+AGG | - | chr5_1:533220-533239 | None:intergenic | 35.0% | |
| CCTAAAGATTCCTCTATACA+AGG | + | chr5_1:533217-533236 | Msa0709380:CDS | 35.0% | |
| GGTAATTTATCCATGAACTG+TGG | + | chr5_1:533238-533257 | Msa0709380:intron | 35.0% | |
| ATTTAAAGGCCTCTGTTAGT+TGG | + | chr5_1:533272-533291 | Msa0709380:intron | 35.0% | |
| TCAACTTCAATTACACGACA+TGG | - | chr5_1:533300-533319 | None:intergenic | 35.0% | |
| TTCGGTACTTAAGAACAACA+TGG | + | chr5_1:533380-533399 | Msa0709380:intron | 35.0% | |
| CAAAACCAAGTTCTTGTTAC+CGG | - | chr5_1:533618-533637 | None:intergenic | 35.0% | |
| CCATTAATCACATTGAAAGC+GGG | - | chr5_1:533647-533666 | None:intergenic | 35.0% | |
| GCTTTCAATGTGATTAATGG+TGG | + | chr5_1:533647-533666 | Msa0709380:CDS | 35.0% | |
| ATTCGTTTACCTCTTCCAAA+AGG | + | chr5_1:533882-533901 | Msa0709380:intron | 35.0% | |
| !! | TAGATAATGCCTTTTGGAAG+AGG | - | chr5_1:533894-533913 | None:intergenic | 35.0% |
| TCTATCCACATATGCTTTGA+TGG | + | chr5_1:534051-534070 | Msa0709380:intron | 35.0% | |
| AAGAACCATCAAAGCATATG+TGG | - | chr5_1:534059-534078 | None:intergenic | 35.0% | |
| GTTCCTTCTGATATCATTTC+AGG | + | chr5_1:534130-534149 | Msa0709380:intron | 35.0% | |
| !!! | TCCTTGTTTTCCTGAATGTT+GGG | - | chr5_1:534218-534237 | None:intergenic | 35.0% |
| !!! | TTCCTTGTTTTCCTGAATGT+TGG | - | chr5_1:534219-534238 | None:intergenic | 35.0% |
| AACATTCAGGAAAACAAGGA+AGG | + | chr5_1:534218-534237 | Msa0709380:CDS | 35.0% | |
| GGAGAAAAAACTTACTTTGC+CGG | - | chr5_1:534285-534304 | None:intergenic | 35.0% | |
| ! | TTCTTAGGTTGTCATTGGAA+TGG | + | chr5_1:534381-534400 | Msa0709380:intron | 35.0% |
| AAAGAGTGAGAAAGGAAAGT+CGG | - | chr5_1:534555-534574 | None:intergenic | 35.0% | |
| ! | ACTTTCCTTTCTCACTCTTT+TGG | + | chr5_1:534555-534574 | Msa0709380:intron | 35.0% |
| AGGCTTTCTAATAACAACTC+TGG | - | chr5_1:534654-534673 | None:intergenic | 35.0% | |
| ! | AGAGTTGTTATTAGAAAGCC+TGG | + | chr5_1:534653-534672 | Msa0709380:intron | 35.0% |
| ! | GAGTTGTTATTAGAAAGCCT+GGG | + | chr5_1:534654-534673 | Msa0709380:intron | 35.0% |
| !! | AACTGTTTCTATTGTTACCC+AGG | - | chr5_1:534674-534693 | None:intergenic | 35.0% |
| ! | AGAAACAGTTCTTTTGGCAA+AGG | + | chr5_1:534684-534703 | Msa0709380:intron | 35.0% |
| ! | GAAACAGTTCTTTTGGCAAA+GGG | + | chr5_1:534685-534704 | Msa0709380:intron | 35.0% |
| GTACCCAATTGTTTCAATTG+AGG | + | chr5_1:535074-535093 | Msa0709380:CDS | 35.0% | |
| GGATCCTCAATTGAAACAAT+TGG | - | chr5_1:535081-535100 | None:intergenic | 35.0% | |
| GGAACCAATGTACAAATTGT+TGG | + | chr5_1:535150-535169 | Msa0709380:CDS | 35.0% | |
| !! | AATTGTTGGTGATGATCTCT+TGG | + | chr5_1:535164-535183 | Msa0709380:CDS | 35.0% |
| AGCAAAAAGCAACAAATCAG+AGG | - | chr5_1:535259-535278 | None:intergenic | 35.0% | |
| AAACAACAGGTCAACCAAAT+TGG | + | chr5_1:535434-535453 | Msa0709380:intron | 35.0% | |
| GTAATCAACAAACACTAACC+TGG | - | chr5_1:535853-535872 | None:intergenic | 35.0% | |
| AAGCTCAAGCAGTTTCTAAT+TGG | + | chr5_1:535909-535928 | Msa0709380:intron | 35.0% | |
| TCAAGCAGTTTCTAATTGGT+TGG | + | chr5_1:535913-535932 | Msa0709380:intron | 35.0% | |
| CACTTTCAAAGCTTCTAGTA+TGG | - | chr5_1:536025-536044 | None:intergenic | 35.0% | |
| !! | CATACTAGAAGCTTTGAAAG+TGG | + | chr5_1:536023-536042 | Msa0709380:exon | 35.0% |
| !! | AGCTTTGAAAGTGGAAAAAC+CGG | + | chr5_1:536032-536051 | Msa0709380:three_prime_UTR | 35.0% |
| ! | TCAAACTAAGGTTGGTTATC+CGG | - | chr5_1:536054-536073 | None:intergenic | 35.0% |
| GTCAGCCCCATAAAATAAAA+AGG | - | chr5_1:536182-536201 | None:intergenic | 35.0% | |
| ! | CCACACAACTTTAAAAATCC+AGG | - | chr5_1:536214-536233 | None:intergenic | 35.0% |
| !!! | CCTGGATTTTTAAAGTTGTG+TGG | + | chr5_1:536211-536230 | Msa0709380:three_prime_UTR | 35.0% |
| ATTGGAACGACATTGAAAGT+AGG | - | chr5_1:536267-536286 | None:intergenic | 35.0% | |
| AGTTCAAGCAATAAAACCTG+AGG | - | chr5_1:536492-536511 | None:intergenic | 35.0% | |
| CTGAAAAGAGAACTGTATTG+TGG | + | chr5_1:536598-536617 | Msa0709380:three_prime_UTR | 35.0% | |
| CAGACACCGTATAAAATATG+TGG | + | chr5_1:536637-536656 | Msa0709380:three_prime_UTR | 35.0% | |
| CACCGTATAAAATATGTGGT+TGG | + | chr5_1:536641-536660 | Msa0709380:three_prime_UTR | 35.0% | |
| AAATATGTGGTTGGGTGTTT+AGG | + | chr5_1:536650-536669 | Msa0709380:three_prime_UTR | 35.0% | |
| !! | TCACATCGATTTCTTCTCCA+TGG | + | chr5_1:531451-531470 | Msa0709380:exon | 40.0% |
| GAAATCGATGAGCGATAGAT+CGG | - | chr5_1:531581-531600 | None:intergenic | 40.0% | |
| GTTGATATAACCGTATCCGA+TGG | + | chr5_1:531653-531672 | Msa0709380:CDS | 40.0% | |
| ! | CTCCTAATGAAGGGTATAAC+TGG | - | chr5_1:532249-532268 | None:intergenic | 40.0% |
| GAAATGAATGAAGGCTCAGA+AGG | - | chr5_1:532518-532537 | None:intergenic | 40.0% | |
| TGCAGGTGCCAAAAAAAATC+AGG | - | chr5_1:532725-532744 | None:intergenic | 40.0% | |
| !!! | TGATTTTTTTTGGCACCTGC+AGG | + | chr5_1:532724-532743 | Msa0709380:intron | 40.0% |
| !! | ATCATTGCACCAGCATTGAT+CGG | + | chr5_1:532767-532786 | Msa0709380:CDS | 40.0% |
| CAATTTCTGTCTGCTGAGTT+GGG | - | chr5_1:532980-532999 | None:intergenic | 40.0% | |
| TCAATTTCTGTCTGCTGAGT+TGG | - | chr5_1:532981-533000 | None:intergenic | 40.0% | |
| TTCATGGTTCAGAAGCTTGA+CGG | + | chr5_1:533005-533024 | Msa0709380:CDS | 40.0% | |
| GACGGAACTGTTAATGAATG+GGG | + | chr5_1:533023-533042 | Msa0709380:CDS | 40.0% | |
| GAACTGTTAATGAATGGGGT+TGG | + | chr5_1:533027-533046 | Msa0709380:CDS | 40.0% | |
| AGACACTGCTAATATGGCAT+TGG | - | chr5_1:533168-533187 | None:intergenic | 40.0% | |
| TGCAAGAGACACTGCTAATA+TGG | - | chr5_1:533174-533193 | None:intergenic | 40.0% | |
| CAGTTAAGTACCACAGTTCA+TGG | - | chr5_1:533251-533270 | None:intergenic | 40.0% | |
| ACTTCTTTATGTCCATTCCG+TGG | + | chr5_1:533570-533589 | Msa0709380:intron | 40.0% | |
| CTTCTTTATGTCCATTCCGT+GGG | + | chr5_1:533571-533590 | Msa0709380:intron | 40.0% | |
| CAGCATATTGCAAACATTGC+CGG | + | chr5_1:533596-533615 | Msa0709380:intron | 40.0% | |
| CCCGCTTTCAATGTGATTAA+TGG | + | chr5_1:533644-533663 | Msa0709380:CDS | 40.0% | |
| !! | ATTAATGGTGGATCACATGC+AGG | + | chr5_1:533659-533678 | Msa0709380:CDS | 40.0% |
| AGGAAACAAACTTGCAATGC+AGG | + | chr5_1:533679-533698 | Msa0709380:CDS | 40.0% | |
| TTCTGATGTCATGCATATGC+AGG | + | chr5_1:533762-533781 | Msa0709380:intron | 40.0% | |
| CATGCATATGCAGGAGTTTA+TGG | + | chr5_1:533771-533790 | Msa0709380:intron | 40.0% | |
| GAGTTTATGGTTCTTCCTGT+TGG | + | chr5_1:533784-533803 | Msa0709380:CDS | 40.0% | |
| TTTCAAGGAAGCCATGAAGA+TGG | + | chr5_1:533816-533835 | Msa0709380:CDS | 40.0% | |
| TTCAAGGAAGCCATGAAGAT+GGG | + | chr5_1:533817-533836 | Msa0709380:CDS | 40.0% | |
| !! | TAAAAGCACCCGCTTATTAC+TGG | - | chr5_1:533986-534005 | None:intergenic | 40.0% |
| ! | TAATAAGCGGGTGCTTTTAC+TGG | + | chr5_1:533987-534006 | Msa0709380:intron | 40.0% |
| CAGCCTGAAATGATATCAGA+AGG | - | chr5_1:534136-534155 | None:intergenic | 40.0% | |
| GGTCAAGATGCAGTAAATGT+TGG | + | chr5_1:534173-534192 | Msa0709380:CDS | 40.0% | |
| !! | GCAGTAAATGTTGGTGATGA+AGG | + | chr5_1:534182-534201 | Msa0709380:CDS | 40.0% |
| !! | GTAAATGTTGGTGATGAAGG+TGG | + | chr5_1:534185-534204 | Msa0709380:CDS | 40.0% |
| !! | CTTGTTTTCCTGAATGTTGG+GGG | - | chr5_1:534216-534235 | None:intergenic | 40.0% |
| !!! | CCTTGTTTTCCTGAATGTTG+GGG | - | chr5_1:534217-534236 | None:intergenic | 40.0% |
| TCAGGAAAACAAGGAAGGTT+TGG | + | chr5_1:534223-534242 | Msa0709380:CDS | 40.0% | |
| ATTGACAAAGCTGGTTACAC+CGG | + | chr5_1:534263-534282 | Msa0709380:CDS | 40.0% | |
| ! | AAGGATTTGAGACTTCTGAG+CGG | - | chr5_1:534515-534534 | None:intergenic | 40.0% |
| !! | GAAAGTCGGTTTGAAGAGAA+GGG | - | chr5_1:534541-534560 | None:intergenic | 40.0% |
| AAGCACCAAAAGAGTGAGAA+AGG | - | chr5_1:534563-534582 | None:intergenic | 40.0% | |
| CTAAGGTGTATAATCAGCAC+AGG | - | chr5_1:534629-534648 | None:intergenic | 40.0% | |
| TTGACAATCCAGAACAACGA+CGG | + | chr5_1:534994-535013 | Msa0709380:intron | 40.0% | |
| ! | AATTGAGGATCCTTTTGACC+AGG | + | chr5_1:535089-535108 | Msa0709380:CDS | 40.0% |
| !! | TACATTGGTTCCAATCTCAC+CGG | - | chr5_1:535142-535161 | None:intergenic | 40.0% |
| TAATATACAGACCTTGGGGT+TGG | - | chr5_1:535193-535212 | None:intergenic | 40.0% | |
| ! | ATGCAATGCTCTTTTGCTCA+AGG | + | chr5_1:535320-535339 | Msa0709380:CDS | 40.0% |
| ! | GGCAAATATTTTCTGCAGAG+AGG | + | chr5_1:535358-535377 | Msa0709380:intron | 40.0% |
| GACAAAGTTCAAACCTTCTG+TGG | - | chr5_1:535526-535545 | None:intergenic | 40.0% | |
| AACAGCAAGATCAGCAATGA+AGG | - | chr5_1:535669-535688 | None:intergenic | 40.0% | |
| ! | TTCATTGCTGATCTTGCTGT+TGG | + | chr5_1:535668-535687 | Msa0709380:CDS | 40.0% |
| !! | TCTTGCTGTTGGTTTGTCAA+CGG | + | chr5_1:535679-535698 | Msa0709380:CDS | 40.0% |
| GAACAGGGTCAAATTAAGAC+CGG | + | chr5_1:535791-535810 | Msa0709380:intron | 40.0% | |
| AACACTAACCTGGTTGTACT+TGG | - | chr5_1:535843-535862 | None:intergenic | 40.0% | |
| TACATTTGCTTCGGTTGCTT+CGG | + | chr5_1:535870-535889 | Msa0709380:intron | 40.0% | |
| TTGGCAGCTATTGAGAATTG+AGG | + | chr5_1:535943-535962 | Msa0709380:intron | 40.0% | |
| CTCATTGCTCAAACTAAGGT+TGG | - | chr5_1:536062-536081 | None:intergenic | 40.0% | |
| !! | TCAAAAGTATCACTACCCAC+TGG | + | chr5_1:536346-536365 | Msa0709380:three_prime_UTR | 40.0% |
| TTGTTGTATACGTAGCCAGT+GGG | - | chr5_1:536364-536383 | None:intergenic | 40.0% | |
| ! | TTTGTTGTATACGTAGCCAG+TGG | - | chr5_1:536365-536384 | None:intergenic | 40.0% |
| AAGCAATAAAACCTGAGGCT+CGG | - | chr5_1:536487-536506 | None:intergenic | 40.0% | |
| CAACTTAAGCAATCGTGAAG+AGG | - | chr5_1:536544-536563 | None:intergenic | 40.0% | |
| TTGTAAAGACAGATGCGTTG+TGG | + | chr5_1:536561-536580 | Msa0709380:three_prime_UTR | 40.0% | |
| ! | AGAGTGCGTGTTTTGTGTGA+GGG | - | chr5_1:531389-531408 | None:intergenic | 45.0% |
| !! | AAGAGTGCGTGTTTTGTGTG+AGG | - | chr5_1:531390-531409 | None:intergenic | 45.0% |
| ACGACTGTCAAAGATCTGAC+GGG | - | chr5_1:531498-531517 | None:intergenic | 45.0% | |
| CACGACTGTCAAAGATCTGA+CGG | - | chr5_1:531499-531518 | None:intergenic | 45.0% | |
| !! | AGCGAAAGTACCATCGGATA+CGG | - | chr5_1:531666-531685 | None:intergenic | 45.0% |
| !! | AGCTCTAGCGAAAGTACCAT+CGG | - | chr5_1:531672-531691 | None:intergenic | 45.0% |
| GAGTGAAGCATACATACCAG+TGG | - | chr5_1:531714-531733 | None:intergenic | 45.0% | |
| GAGGCTCTTGAGTTAAGAGA+TGG | + | chr5_1:532124-532143 | Msa0709380:CDS | 45.0% | |
| GCTCTTGAGTTAAGAGATGG+AGG | + | chr5_1:532127-532146 | Msa0709380:CDS | 45.0% | |
| GATGGAGGATCTGACTATCT+TGG | + | chr5_1:532142-532161 | Msa0709380:CDS | 45.0% | |
| AGGATCTGACTATCTTGGCA+AGG | + | chr5_1:532147-532166 | Msa0709380:CDS | 45.0% | |
| GGATCTGACTATCTTGGCAA+GGG | + | chr5_1:532148-532167 | Msa0709380:CDS | 45.0% | |
| ! | TCTTGGCAAGGGTGTATCAA+AGG | + | chr5_1:532159-532178 | Msa0709380:CDS | 45.0% |
| ! | TGCAATGATGGTGTTCACGT+TGG | - | chr5_1:532756-532775 | None:intergenic | 45.0% |
| GATCAATGCTGGTGCAATGA+TGG | - | chr5_1:532768-532787 | None:intergenic | 45.0% | |
| CTTGCCTTTATGCAACGAAC+AGG | + | chr5_1:532953-532972 | Msa0709380:intron | 45.0% | |
| !! | ATGGGGTTGGTGCAAACAAA+AGG | + | chr5_1:533040-533059 | Msa0709380:CDS | 45.0% |
| GACATGGATCCAACTAACAG+AGG | - | chr5_1:533284-533303 | None:intergenic | 45.0% | |
| TTTGCAATATGCTGCACCCA+CGG | - | chr5_1:533590-533609 | None:intergenic | 45.0% | |
| CATTGCCGGTAACAAGAACT+TGG | + | chr5_1:533610-533629 | Msa0709380:CDS | 45.0% | |
| ATCACATTGAAAGCGGGAAC+AGG | - | chr5_1:533641-533660 | None:intergenic | 45.0% | |
| CAAACTCAAGCACACGAGAA+CGG | - | chr5_1:533720-533739 | None:intergenic | 45.0% | |
| CTTCATGGCTTCCTTGAAAG+AGG | - | chr5_1:533815-533834 | None:intergenic | 45.0% | |
| GGAAGTCTATCACCATCTGA+AGG | + | chr5_1:533843-533862 | Msa0709380:CDS | 45.0% | |
| GTCTATCACCATCTGAAGGT+CGG | + | chr5_1:533847-533866 | Msa0709380:intron | 45.0% | |
| GCATATGTGGATAGACACCA+GGG | - | chr5_1:534046-534065 | None:intergenic | 45.0% | |
| AGCATATGTGGATAGACACC+AGG | - | chr5_1:534047-534066 | None:intergenic | 45.0% | |
| CCCCAACATTCAGGAAAACA+AGG | + | chr5_1:534214-534233 | Msa0709380:CDS | 45.0% | |
| ! | GTAACCAGCTTTGTCAATGG+CGG | - | chr5_1:534261-534280 | None:intergenic | 45.0% |
| ! | GGTGTAACCAGCTTTGTCAA+TGG | - | chr5_1:534264-534283 | None:intergenic | 45.0% |
| TGCAGCTTCTGAGTTCTACA+AGG | + | chr5_1:534408-534427 | Msa0709380:CDS | 45.0% | |
| AGCTTCTGAGTTCTACAAGG+AGG | + | chr5_1:534411-534430 | Msa0709380:CDS | 45.0% | |
| ! | AGGATTTGAGACTTCTGAGC+GGG | - | chr5_1:534514-534533 | None:intergenic | 45.0% |
| GGTTTGAAGAGAAGGGAGTA+AGG | - | chr5_1:534534-534553 | None:intergenic | 45.0% | |
| !! | GGAAAGTCGGTTTGAAGAGA+AGG | - | chr5_1:534542-534561 | None:intergenic | 45.0% |
| AGGTGTATAATCAGCACAGG+AGG | - | chr5_1:534626-534645 | None:intergenic | 45.0% | |
| CTCACAGAAGATATCTGGAG+AGG | + | chr5_1:535017-535036 | Msa0709380:CDS | 45.0% | |
| ! | ATCCTTTTGACCAGGATGAC+TGG | + | chr5_1:535097-535116 | Msa0709380:CDS | 45.0% |
| ! | TCCTTTTGACCAGGATGACT+GGG | + | chr5_1:535098-535117 | Msa0709380:CDS | 45.0% |
| GAGCACTATGCTAAGATGAC+CGG | + | chr5_1:535120-535139 | Msa0709380:CDS | 45.0% | |
| ATTGCCTTCTGAACTCTCTG+TGG | - | chr5_1:535288-535307 | None:intergenic | 45.0% | |
| GCAGAGAGGTTATTAGACCT+AGG | + | chr5_1:535372-535391 | Msa0709380:intron | 45.0% | |
| TCTCAGTCACGGATCCAATT+TGG | - | chr5_1:535451-535470 | None:intergenic | 45.0% | |
| GGCTTCAATACTCTCAGTCA+CGG | - | chr5_1:535462-535481 | None:intergenic | 45.0% | |
| ! | AGCCTTTTTGGACATCCTGA+CGG | - | chr5_1:535483-535502 | None:intergenic | 45.0% |
| GATGTCCAAAAAGGCTGGAT+GGG | + | chr5_1:535487-535506 | Msa0709380:CDS | 45.0% | |
| ATGTCCAAAAAGGCTGGATG+GGG | + | chr5_1:535488-535507 | Msa0709380:CDS | 45.0% | |
| AAGTTCAAACCTTCTGTGGC+TGG | - | chr5_1:535522-535541 | None:intergenic | 45.0% | |
| ! | CTAATTGGTTGGTGCTCACT+TGG | + | chr5_1:535924-535943 | Msa0709380:intron | 45.0% |
| GCAGCTATTGAGAATTGAGG+AGG | + | chr5_1:535946-535965 | Msa0709380:intron | 45.0% | |
| TTGAGAATTGAGGAGGAGCT+TGG | + | chr5_1:535953-535972 | Msa0709380:CDS | 45.0% | |
| TGAGCAATGAGATTTGGCTG+CGG | + | chr5_1:536071-536090 | Msa0709380:three_prime_UTR | 45.0% | |
| GCAACCAAACTTTACTCCAC+CGG | + | chr5_1:536386-536405 | Msa0709380:three_prime_UTR | 45.0% | |
| ATATAGCCAACCCAAGCAAC+CGG | - | chr5_1:536408-536427 | None:intergenic | 45.0% | |
| !! | TTTGAAAAATATTATAAAAT+AGG | + | chr5_1:531962-531981 | Msa0709380:intron | 5.0% |
| GGTCTCAGACACCTGCTTAT+GGG | - | chr5_1:531368-531387 | None:intergenic | 50.0% | |
| GATGGAGGTAATAGCAGCCA+TGG | - | chr5_1:531471-531490 | None:intergenic | 50.0% | |
| GGCTGCTATTACCTCCATCA+AGG | + | chr5_1:531472-531491 | Msa0709380:CDS | 50.0% | |
| ! | AAAGATCTGACGGGCCTTGA+TGG | - | chr5_1:531489-531508 | None:intergenic | 50.0% |
| CGTCAGATCTTTGACAGTCG+TGG | + | chr5_1:531497-531516 | Msa0709380:CDS | 50.0% | |
| GAAGTGAAGACGAACCTCGA+CGG | - | chr5_1:531531-531550 | None:intergenic | 50.0% | |
| ATACCAGTGGATGCACCACT+AGG | - | chr5_1:531701-531720 | None:intergenic | 50.0% | |
| GAAGGCTCAGAAGGATCCAT+TGG | - | chr5_1:532509-532528 | None:intergenic | 50.0% | |
| CATACCTTGCCGATCAATGC+TGG | - | chr5_1:532779-532798 | None:intergenic | 50.0% | |
| GGGTCCTGTTCGTTGCATAA+AGG | - | chr5_1:532960-532979 | None:intergenic | 50.0% | |
| TCTCTTGCAGTGTGCAAAGC+TGG | + | chr5_1:533185-533204 | Msa0709380:CDS | 50.0% | |
| AATATGCTGCACCCACGGAA+TGG | - | chr5_1:533585-533604 | None:intergenic | 50.0% | |
| TTGAAAGAGGAGGCTCCAAC+AGG | - | chr5_1:533802-533821 | None:intergenic | 50.0% | |
| TGTTGGAGCCTCCTCTTTCA+AGG | + | chr5_1:533801-533820 | Msa0709380:CDS | 50.0% | |
| CATGGCTTCCTTGAAAGAGG+AGG | - | chr5_1:533812-533831 | None:intergenic | 50.0% | |
| GACTTCCACACCCATCTTCA+TGG | - | chr5_1:533830-533849 | None:intergenic | 50.0% | |
| GATGCAAACCGACCTTCAGA+TGG | - | chr5_1:533858-533877 | None:intergenic | 50.0% | |
| AAGTCCGCCATTGACAAAGC+TGG | + | chr5_1:534254-534273 | Msa0709380:CDS | 50.0% | |
| ! | GGATTTGAGACTTCTGAGCG+GGG | - | chr5_1:534513-534532 | None:intergenic | 50.0% |
| ! | TCAGCACAGGAGGCATAATG+AGG | - | chr5_1:534616-534635 | None:intergenic | 50.0% |
| GACGGCTCACAGAAGATATC+TGG | + | chr5_1:535012-535031 | Msa0709380:CDS | 50.0% | |
| TCCCAGTCATCCTGGTCAAA+AGG | - | chr5_1:535102-535121 | None:intergenic | 50.0% | |
| GCTAAGATGACCGGTGAGAT+TGG | + | chr5_1:535129-535148 | Msa0709380:CDS | 50.0% | |
| TCTCTTGGTTACCAACCCCA+AGG | + | chr5_1:535179-535198 | Msa0709380:CDS | 50.0% | |
| GTGTCCACAGAGAGTTCAGA+AGG | + | chr5_1:535281-535300 | Msa0709380:intron | 50.0% | |
| !! | CTGAGAGTATTGAAGCCGTC+AGG | + | chr5_1:535465-535484 | Msa0709380:CDS | 50.0% |
| AGCCGTCAGGATGTCCAAAA+AGG | + | chr5_1:535478-535497 | Msa0709380:CDS | 50.0% | |
| GTCAGGATGTCCAAAAAGGC+TGG | + | chr5_1:535482-535501 | Msa0709380:CDS | 50.0% | |
| GGATGTCCAAAAAGGCTGGA+TGG | + | chr5_1:535486-535505 | Msa0709380:CDS | 50.0% | |
| TGTTTGCAGTGGAGAGACTG+AGG | + | chr5_1:535640-535659 | Msa0709380:intron | 50.0% | |
| CTTCTAGTATGGCTCGACAG+GGG | - | chr5_1:536014-536033 | None:intergenic | 50.0% | |
| GCTTCTAGTATGGCTCGACA+GGG | - | chr5_1:536015-536034 | None:intergenic | 50.0% | |
| AGCTTCTAGTATGGCTCGAC+AGG | - | chr5_1:536016-536035 | None:intergenic | 50.0% | |
| GCAACCGGTGGAGTAAAGTT+TGG | - | chr5_1:536393-536412 | None:intergenic | 50.0% | |
| ! | ACTTTACTCCACCGGTTGCT+TGG | + | chr5_1:536394-536413 | Msa0709380:three_prime_UTR | 50.0% |
| ! | CTTTACTCCACCGGTTGCTT+GGG | + | chr5_1:536395-536414 | Msa0709380:three_prime_UTR | 50.0% |
| CAATAAAACCTGAGGCTCGG+TGG | - | chr5_1:536484-536503 | None:intergenic | 50.0% | |
| GGGTCTCAGACACCTGCTTA+TGG | - | chr5_1:531369-531388 | None:intergenic | 55.0% | |
| TGAAGACGAACCTCGACGGT+AGG | - | chr5_1:531527-531546 | None:intergenic | 55.0% | |
| GCTAGAGCTGCTGTTCCTAG+TGG | + | chr5_1:531683-531702 | Msa0709380:CDS | 55.0% | |
| GTTCCTAGTGGTGCATCCAC+TGG | + | chr5_1:531695-531714 | Msa0709380:CDS | 55.0% | |
| !! | TGCACCAGCATTGATCGGCA+AGG | + | chr5_1:532772-532791 | Msa0709380:CDS | 55.0% |
| CTGGGGTGACTATGTTGCTG+CGG | - | chr5_1:533496-533515 | None:intergenic | 55.0% | |
| GGAAGCCATGAAGATGGGTG+TGG | + | chr5_1:533822-533841 | Msa0709380:CDS | 55.0% | |
| ATGTGGATAGACACCAGGGC+TGG | - | chr5_1:534042-534061 | None:intergenic | 55.0% | |
| ! | TGGCTTTGCCCCCAACATTC+AGG | + | chr5_1:534205-534224 | Msa0709380:CDS | 55.0% |
| TCTGAGCGGGGAGATTGGTA+TGG | - | chr5_1:534501-534520 | None:intergenic | 55.0% | |
| AGACTTCTGAGCGGGGAGAT+TGG | - | chr5_1:534506-534525 | None:intergenic | 55.0% | |
| TCTGTGAGCCGTCGTTGTTC+TGG | - | chr5_1:535005-535024 | None:intergenic | 55.0% | |
| CATAGTGCTCCCAGTCATCC+TGG | - | chr5_1:535110-535129 | None:intergenic | 55.0% | |
| ! | GACACCCCATCCAGCCTTTT+TGG | - | chr5_1:535495-535514 | None:intergenic | 55.0% |
| GTGTCATGACCAGCCACAGA+AGG | + | chr5_1:535510-535529 | Msa0709380:CDS | 55.0% | |
| ! | TTAAGACCGGAGCACCTTGC+AGG | + | chr5_1:535804-535823 | Msa0709380:CDS | 55.0% |
| GCGTCTTGCCAAGTACAACC+AGG | + | chr5_1:535832-535851 | Msa0709380:CDS | 55.0% | |
| ! | GGTGCTGAAGCAGTGTATGC+TGG | + | chr5_1:535974-535993 | Msa0709380:CDS | 55.0% |
| AGTATGGCTCGACAGGGGTA+CGG | - | chr5_1:536009-536028 | None:intergenic | 55.0% | |
| ! | GATCTGACGGGCCTTGATGG+AGG | - | chr5_1:531486-531505 | None:intergenic | 60.0% |
| TCGTGGCAATCCTACCGTCG+AGG | + | chr5_1:531514-531533 | Msa0709380:CDS | 60.0% | |
| TCACGTTGGCAACAGCCTGC+AGG | - | chr5_1:532742-532761 | None:intergenic | 60.0% | |
| AGTCTCCTTTGTGCCAGCCC+TGG | + | chr5_1:534026-534045 | Msa0709380:intron | 60.0% | |
| ! | AGACACCAGGGCTGGCACAA+AGG | - | chr5_1:534034-534053 | None:intergenic | 60.0% |
| ! | CTCTGACCTGCAAGGTGCTC+CGG | - | chr5_1:535813-535832 | None:intergenic | 60.0% |
| GCAAGACGCTCTGACCTGCA+AGG | - | chr5_1:535821-535840 | None:intergenic | 60.0% | |
| GGGGCTGACAAGTTATCCCC+TGG | + | chr5_1:536193-536212 | Msa0709380:three_prime_UTR | 60.0% | |
| ! | ACTCCACCGGTTGCTTGGGT+TGG | + | chr5_1:536399-536418 | Msa0709380:three_prime_UTR | 60.0% |
| TAGCCAACCCAAGCAACCGG+TGG | - | chr5_1:536405-536424 | None:intergenic | 60.0% | |
| ACCATCTACCACCGAGCCTC+AGG | + | chr5_1:536473-536492 | Msa0709380:three_prime_UTR | 60.0% | |
| !! | ACCTGAGGCTCGGTGGTAGA+TGG | - | chr5_1:536477-536496 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 531331 | 536744 | 531331 | ID=Msa0709380;Name=Msa0709380 |
| chr5_1 | mRNA | 531331 | 536744 | 531331 | ID=Msa0709380-mRNA-1;Parent=Msa0709380;Name=Msa0709380-mRNA-1;_AED=0.14;_eAED=0.14;_QI=139|1|1|1|1|1|16|714|444 |
| chr5_1 | exon | 531331 | 531535 | 531331 | ID=Msa0709380-mRNA-1:exon:183;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 531653 | 531716 | 531653 | ID=Msa0709380-mRNA-1:exon:184;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 532116 | 532180 | 532116 | ID=Msa0709380-mRNA-1:exon:185;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 532746 | 532793 | 532746 | ID=Msa0709380-mRNA-1:exon:186;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 532975 | 533061 | 532975 | ID=Msa0709380-mRNA-1:exon:187;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 533158 | 533238 | 533158 | ID=Msa0709380-mRNA-1:exon:188;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 533599 | 533700 | 533599 | ID=Msa0709380-mRNA-1:exon:189;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 533784 | 533864 | 533784 | ID=Msa0709380-mRNA-1:exon:190;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 534152 | 534289 | 534152 | ID=Msa0709380-mRNA-1:exon:191;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 534388 | 534465 | 534388 | ID=Msa0709380-mRNA-1:exon:192;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 535006 | 535200 | 535006 | ID=Msa0709380-mRNA-1:exon:193;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 535291 | 535341 | 535291 | ID=Msa0709380-mRNA-1:exon:194;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 535443 | 535531 | 535443 | ID=Msa0709380-mRNA-1:exon:195;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 535649 | 535700 | 535649 | ID=Msa0709380-mRNA-1:exon:196;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 535797 | 535853 | 535797 | ID=Msa0709380-mRNA-1:exon:197;Parent=Msa0709380-mRNA-1 |
| chr5_1 | exon | 535950 | 536744 | 535950 | ID=Msa0709380-mRNA-1:exon:198;Parent=Msa0709380-mRNA-1 |
| chr5_1 | five_prime_UTR | 531331 | 531469 | 531331 | ID=Msa0709380-mRNA-1:five_prime_utr;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 531470 | 531535 | 531470 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 531653 | 531716 | 531653 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 532116 | 532180 | 532116 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 532746 | 532793 | 532746 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 532975 | 533061 | 532975 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 533158 | 533238 | 533158 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 533599 | 533700 | 533599 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 533784 | 533864 | 533784 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 534152 | 534289 | 534152 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 534388 | 534465 | 534388 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 535006 | 535200 | 535006 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 535291 | 535341 | 535291 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 535443 | 535531 | 535443 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 535649 | 535700 | 535649 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 535797 | 535853 | 535797 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | CDS | 535950 | 536030 | 535950 | ID=Msa0709380-mRNA-1:cds;Parent=Msa0709380-mRNA-1 |
| chr5_1 | three_prime_UTR | 536031 | 536744 | 536031 | ID=Msa0709380-mRNA-1:three_prime_utr;Parent=Msa0709380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
