Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041830 | XP_013450091.1 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041830 | sp|P42896|ENO_RICCO | 90.023 | 441 | 44 | 0 | 4 | 444 | 5 | 445 | 0.0 | 831 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041830 | A0A072U338 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003330 | Msa1041830 | 0.801539 | 8.586700e-49 | -8.615850e-47 |
| Msa0016440 | Msa1041830 | 0.821185 | 4.618713e-53 | -8.615850e-47 |
| Msa0042510 | Msa1041830 | 0.810172 | 1.315389e-50 | -8.615850e-47 |
| Msa0116600 | Msa1041830 | 0.812573 | 3.961713e-51 | -8.615850e-47 |
| Msa0116690 | Msa1041830 | 0.800330 | 1.516269e-48 | -8.615850e-47 |
| Msa0619230 | Msa1041830 | 0.800753 | 1.243285e-48 | -8.615850e-47 |
| Msa0621190 | Msa1041830 | 0.840541 | 8.170052e-58 | -8.615850e-47 |
| Msa0655970 | Msa1041830 | 0.844724 | 6.331588e-59 | -8.615850e-47 |
| Msa0656320 | Msa1041830 | 0.812386 | 4.352127e-51 | -8.615850e-47 |
| Msa0709380 | Msa1041830 | 0.987413 | 3.622792e-170 | -8.615850e-47 |
| Msa0790450 | Msa1041830 | 0.810740 | 9.917599e-51 | -8.615850e-47 |
| Msa0132890 | Msa1041830 | 0.811355 | 7.298427e-51 | -8.615850e-47 |
| Msa0188740 | Msa1041830 | 0.835801 | 1.358214e-56 | -8.615850e-47 |
| Msa0192050 | Msa1041830 | 0.801295 | 9.629875e-49 | -8.615850e-47 |
| Msa0192300 | Msa1041830 | 0.823582 | 1.282039e-53 | -8.615850e-47 |
| Msa0195030 | Msa1041830 | 0.817716 | 2.854105e-52 | -8.615850e-47 |
| Msa0216640 | Msa1041830 | 0.804400 | 2.199876e-49 | -8.615850e-47 |
| Msa0237180 | Msa1041830 | 0.801392 | 9.199470e-49 | -8.615850e-47 |
| Msa0373550 | Msa1041830 | 0.819796 | 9.623759e-53 | -8.615850e-47 |
| Msa0382670 | Msa1041830 | 0.828758 | 7.524154e-55 | -8.615850e-47 |
| Msa0387290 | Msa1041830 | 0.859435 | 4.146014e-63 | -8.615850e-47 |
| Msa0389800 | Msa1041830 | 0.809699 | 1.663376e-50 | -8.615850e-47 |
| Msa0416470 | Msa1041830 | 0.801012 | 1.100485e-48 | -8.615850e-47 |
| Msa0436830 | Msa1041830 | -0.817956 | 2.520256e-52 | -8.615850e-47 |
| Msa0468140 | Msa1041830 | 0.815462 | 9.132281e-52 | -8.615850e-47 |
| Msa0468660 | Msa1041830 | 0.806117 | 9.613358e-50 | -8.615850e-47 |
| Msa0477670 | Msa1041830 | 0.822656 | 2.108045e-53 | -8.615850e-47 |
| Msa0982260 | Msa1041830 | 0.809697 | 1.664414e-50 | -8.615850e-47 |
| Msa1041830 | Msa1046140 | 0.800356 | 1.497761e-48 | -8.615850e-47 |
| Msa1041830 | Msa1124980 | 0.979495 | 4.297292e-148 | -8.615850e-47 |
| Msa1041830 | Msa1152860 | 0.813328 | 2.705614e-51 | -8.615850e-47 |
| Msa1041830 | Msa1167360 | 0.979458 | 5.170379e-148 | -8.615850e-47 |
| Msa1041830 | Msa1185870 | 0.804644 | 1.956340e-49 | -8.615850e-47 |
| Msa1041830 | Msa1237040 | 0.818591 | 1.810051e-52 | -8.615850e-47 |
| Msa1041830 | Msa1307730 | 0.813284 | 2.766607e-51 | -8.615850e-47 |
| Msa1041830 | Msa1317390 | 0.827084 | 1.901658e-54 | -8.615850e-47 |
| Msa1041830 | Msa1387750 | 0.817049 | 4.034165e-52 | -8.615850e-47 |
| Msa1041830 | Msa1390760 | 0.803035 | 4.224640e-49 | -8.615850e-47 |
| Msa1041830 | Msa1423050 | 0.977339 | 1.392538e-143 | -8.615850e-47 |
| Msa1041830 | Msa1450560 | 0.814846 | 1.251310e-51 | -8.615850e-47 |
| Msa1041830 | Msa1463510 | 0.873491 | 1.410844e-67 | -8.615850e-47 |
| Msa1041830 | Msa1465890 | 0.840554 | 8.108277e-58 | -8.615850e-47 |
| Msa0243750 | Msa1041830 | 0.809522 | 1.814983e-50 | -8.615850e-47 |
| Msa0274940 | Msa1041830 | 0.830709 | 2.521008e-55 | -8.615850e-47 |
| Msa0282290 | Msa1041830 | 0.808317 | 3.286770e-50 | -8.615850e-47 |
| Msa0301250 | Msa1041830 | 0.820087 | 8.256608e-53 | -8.615850e-47 |
| Msa0315660 | Msa1041830 | 0.813668 | 2.277677e-51 | -8.615850e-47 |
| Msa0482760 | Msa1041830 | 0.816661 | 4.929540e-52 | -8.615850e-47 |
| Msa0500420 | Msa1041830 | 0.801851 | 7.408669e-49 | -8.615850e-47 |
| Msa0511760 | Msa1041830 | 0.801333 | 9.459870e-49 | -8.615850e-47 |
| Msa0852620 | Msa1041830 | 0.805246 | 1.464166e-49 | -8.615850e-47 |
| Msa0880050 | Msa1041830 | 0.977813 | 1.545032e-144 | -8.615850e-47 |
| Msa0930360 | Msa1041830 | 0.849122 | 3.959437e-60 | -8.615850e-47 |
| Msa0930790 | Msa1041830 | 0.845711 | 3.423792e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041830 | MtrunA17_Chr7g0265741 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Msa1041830 | MtrunA17_Chr6g0476311 | 87.640 | 445 | 54 | 1 | 1 | 444 | 2 | 446 | 0.0 | 816 |
| Msa1041830 | MtrunA17_Chr2g0307671 | 68.182 | 440 | 128 | 7 | 2 | 440 | 63 | 491 | 0.0 | 602 |
| Msa1041830 | MtrunA17_Chr5g0447301 | 60.268 | 224 | 81 | 4 | 2 | 224 | 45 | 261 | 1.07e-84 | 261 |
| Msa1041830 | MtrunA17_Chr5g0447311 | 59.155 | 213 | 84 | 3 | 226 | 438 | 19 | 228 | 8.35e-84 | 256 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041830 | AT2G36530.1 | 89.189 | 444 | 48 | 0 | 1 | 444 | 1 | 444 | 0.0 | 821 |
| Msa1041830 | AT2G36530.2 | 89.336 | 422 | 45 | 0 | 23 | 444 | 12 | 433 | 0.0 | 780 |
| Msa1041830 | AT1G74030.1 | 67.352 | 438 | 131 | 6 | 4 | 440 | 51 | 477 | 0.0 | 599 |
| Msa1041830 | AT2G29560.1 | 57.763 | 438 | 174 | 7 | 2 | 438 | 45 | 472 | 1.83e-175 | 500 |
Find 165 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCATATGCAGGAGTTTA+TGG | 0.174723 | 7_1:+79492935 | Msa1041830:intron |
| TAATTAGACGTCATAAAATT+TGG | 0.221935 | 7_1:+79495605 | Msa1041830:three_prime_UTR |
| AAACAACAGGTCAACCAAAT+TGG | 0.247163 | 7_1:+79494608 | Msa1041830:intron |
| GTTACTACTCAACTGAAAAT+TGG | 0.253970 | 7_1:-79495456 | None:intergenic |
| TCTCAGTCACGGATCCAATT+TGG | 0.266564 | 7_1:-79494622 | None:intergenic |
| AAATATGTGGTTGGGTGTTT+AGG | 0.286685 | 7_1:+79495824 | Msa1041830:three_prime_UTR |
| ATAAAATTTGGTCATGCATT+AGG | 0.291097 | 7_1:+79495617 | Msa1041830:three_prime_UTR |
| CCCGCTTTCAATGTGATTAA+TGG | 0.296494 | 7_1:+79492806 | Msa1041830:CDS |
| TGCAAGAGACACTGCTAATA+TGG | 0.297215 | 7_1:-79492331 | None:intergenic |
| GGGTCTCAGACACCTGCTTA+TGG | 0.300267 | 7_1:-79490517 | None:intergenic |
| CACTTTCAAAGCTTCTAGTA+TGG | 0.308227 | 7_1:-79495196 | None:intergenic |
| TCAATTTCTGTCTGCTGAGT+TGG | 0.308960 | 7_1:-79492138 | None:intergenic |
| CCTTGTATAGAGGAATCTTT+AGG | 0.321207 | 7_1:-79492377 | None:intergenic |
| GGATCCTCAATTGAAACAAT+TGG | 0.323273 | 7_1:-79494252 | None:intergenic |
| GACTTCCACACCCATCTTCA+TGG | 0.331030 | 7_1:-79492991 | None:intergenic |
| TTAGTTTGAGCAATGAGATT+TGG | 0.336977 | 7_1:+79495239 | Msa1041830:three_prime_UTR |
| TACGATAAACAAATTAGATT+TGG | 0.337185 | 7_1:+79495871 | Msa1041830:three_prime_UTR |
| CAATGTTCTTAGGTTGTCAT+TGG | 0.342489 | 7_1:+79493531 | Msa1041830:intron |
| ACTTTACTCCACCGGTTGCT+TGG | 0.345294 | 7_1:+79495568 | Msa1041830:three_prime_UTR |
| CTTTACTCCACCGGTTGCTT+GGG | 0.361693 | 7_1:+79495569 | Msa1041830:three_prime_UTR |
| TCAGGAAAACAAGGAAGGTT+TGG | 0.362760 | 7_1:+79493387 | Msa1041830:CDS |
| GTCAGCCCCATAAAATAAAA+AGG | 0.371324 | 7_1:-79495353 | None:intergenic |
| CAATTTCTGTCTGCTGAGTT+GGG | 0.375682 | 7_1:-79492137 | None:intergenic |
| CAAAACCAAGTTCTTGTTAC+CGG | 0.376652 | 7_1:-79492777 | None:intergenic |
| AAAGATCTGACGGGCCTTGA+TGG | 0.379603 | 7_1:-79490637 | None:intergenic |
| AGCTTCTAGTATGGCTCGAC+AGG | 0.381624 | 7_1:-79495187 | None:intergenic |
| TTAAGACCGGAGCACCTTGC+AGG | 0.385327 | 7_1:+79494978 | Msa1041830:CDS |
| TGTTGGAGCCTCCTCTTTCA+AGG | 0.388440 | 7_1:+79492965 | Msa1041830:CDS |
| GACAGAAATTGACAACTTCA+TGG | 0.389489 | 7_1:+79492149 | Msa1041830:CDS |
| TCAAACTAAGGTTGGTTATC+CGG | 0.395194 | 7_1:-79495225 | None:intergenic |
| GACGGCTCACAGAAGATATC+TGG | 0.395388 | 7_1:+79494186 | Msa1041830:CDS |
| ACCTGAGGCTCGGTGGTAGA+TGG | 0.398239 | 7_1:-79495648 | None:intergenic |
| ATCATACGATTTGAACTTCA+AGG | 0.407971 | 7_1:+79493593 | Msa1041830:CDS |
| GCTAAGATGACCGGTGAGAT+TGG | 0.409902 | 7_1:+79494303 | Msa1041830:CDS |
| AGCCGTCAGGATGTCCAAAA+AGG | 0.410162 | 7_1:+79494652 | Msa1041830:CDS |
| GGTCTCAGACACCTGCTTAT+GGG | 0.420775 | 7_1:-79490516 | None:intergenic |
| CAGCATATTGCAAACATTGC+CGG | 0.421071 | 7_1:+79492758 | Msa1041830:intron |
| TTCATTGCTGATCTTGCTGT+TGG | 0.424087 | 7_1:+79494842 | Msa1041830:CDS |
| TGACGGAACTGTTAATGAAT+GGG | 0.427486 | 7_1:+79492182 | Msa1041830:CDS |
| GCAACCGGTGGAGTAAAGTT+TGG | 0.427490 | 7_1:-79495564 | None:intergenic |
| CTCTGACCTGCAAGGTGCTC+CGG | 0.431664 | 7_1:-79494984 | None:intergenic |
| CATTGCCGGTAACAAGAACT+TGG | 0.438486 | 7_1:+79492772 | Msa1041830:CDS |
| GGTGCTGAAGCAGTGTATGC+TGG | 0.440630 | 7_1:+79495148 | Msa1041830:CDS |
| GTACCCAATTGTTTCAATTG+AGG | 0.440774 | 7_1:+79494248 | Msa1041830:CDS |
| AAATCTCATTGCTCAAACTA+AGG | 0.442849 | 7_1:-79495237 | None:intergenic |
| CTCATTGCTCAAACTAAGGT+TGG | 0.443078 | 7_1:-79495233 | None:intergenic |
| AACACTAACCTGGTTGTACT+TGG | 0.444307 | 7_1:-79495014 | None:intergenic |
| ATCACATTGAAAGCGGGAAC+AGG | 0.450874 | 7_1:-79492800 | None:intergenic |
| TCTCTTGCAGTGTGCAAAGC+TGG | 0.451916 | 7_1:+79492345 | Msa1041830:CDS |
| ACCATCTACCACCGAGCCTC+AGG | 0.453494 | 7_1:+79495647 | Msa1041830:three_prime_UTR |
| GATCCTCAATTGAAACAATT+GGG | 0.460561 | 7_1:-79494251 | None:intergenic |
| ACTCCACCGGTTGCTTGGGT+TGG | 0.461300 | 7_1:+79495573 | Msa1041830:three_prime_UTR |
| GAGTTTATGGTTCTTCCTGT+TGG | 0.470295 | 7_1:+79492948 | Msa1041830:CDS |
| TTGAAAGAGGAGGCTCCAAC+AGG | 0.471503 | 7_1:-79492963 | None:intergenic |
| CTTCATGGCTTCCTTGAAAG+AGG | 0.475418 | 7_1:-79492976 | None:intergenic |
| TCACATCGATTTCTTCTCCA+TGG | 0.477736 | 7_1:+79490602 | Msa1041830:exon |
| TCCCAGTCATCCTGGTCAAA+AGG | 0.478242 | 7_1:-79494273 | None:intergenic |
| GATGGAGGATCTGACTATCT+TGG | 0.478515 | 7_1:+79491298 | Msa1041830:CDS |
| AGGAAACAAACTTGCAATGC+AGG | 0.487451 | 7_1:+79492841 | Msa1041830:CDS |
| TTGACGGAACTGTTAATGAA+TGG | 0.488553 | 7_1:+79492181 | Msa1041830:CDS |
| GTTCCTAGTGGTGCATCCAC+TGG | 0.489788 | 7_1:+79490849 | Msa1041830:CDS |
| TTCATGGTTCAGAAGCTTGA+CGG | 0.490896 | 7_1:+79492165 | Msa1041830:CDS |
| CATAGTGCTCCCAGTCATCC+TGG | 0.492578 | 7_1:-79494281 | None:intergenic |
| ACCGTATAAAATATGTGGTT+GGG | 0.493409 | 7_1:+79495816 | Msa1041830:three_prime_UTR |
| GGAACCAATGTACAAATTGT+TGG | 0.493520 | 7_1:+79494324 | Msa1041830:CDS |
| CACCGTATAAAATATGTGGT+TGG | 0.494907 | 7_1:+79495815 | Msa1041830:three_prime_UTR |
| AATTGTTGGTGATGATCTCT+TGG | 0.498883 | 7_1:+79494338 | Msa1041830:CDS |
| GCTGTGATTAAGAAGAAATA+TGG | 0.499581 | 7_1:+79493316 | Msa1041830:CDS |
| ATCACCAACAATTTGTACAT+TGG | 0.504433 | 7_1:-79494328 | None:intergenic |
| AACAGCAAGATCAGCAATGA+AGG | 0.504723 | 7_1:-79494840 | None:intergenic |
| ATATAGCCAACCCAAGCAAC+CGG | 0.504740 | 7_1:-79495579 | None:intergenic |
| GGGGCTGACAAGTTATCCCC+TGG | 0.506892 | 7_1:+79495367 | Msa1041830:three_prime_UTR |
| CTGAGAGTATTGAAGCCGTC+AGG | 0.511646 | 7_1:+79494639 | Msa1041830:CDS |
| AAGTTCAAACCTTCTGTGGC+TGG | 0.511692 | 7_1:-79494693 | None:intergenic |
| CATACCTTGCCGATCAATGC+TGG | 0.514212 | 7_1:-79491936 | None:intergenic |
| TTGAGAATTGAGGAGGAGCT+TGG | 0.514397 | 7_1:+79495127 | Msa1041830:CDS |
| GCAGTAAATGTTGGTGATGA+AGG | 0.515363 | 7_1:+79493346 | Msa1041830:CDS |
| TTCTTAGGTTGTCATTGGAA+TGG | 0.517609 | 7_1:+79493536 | Msa1041830:intron |
| GATCAATGCTGGTGCAATGA+TGG | 0.520209 | 7_1:-79491925 | None:intergenic |
| ACTATAAATAACCCATAAGC+AGG | 0.523830 | 7_1:+79490505 | Msa1041830:five_prime_UTR |
| TTTCAAGGAAGCCATGAAGA+TGG | 0.524759 | 7_1:+79492980 | Msa1041830:CDS |
| TACATTGGTTCCAATCTCAC+CGG | 0.526389 | 7_1:-79494313 | None:intergenic |
| TTGGCAGCTATTGAGAATTG+AGG | 0.528228 | 7_1:+79495117 | Msa1041830:intron |
| AAAAGAAGCGAGAGTTGATA+GGG | 0.529115 | 7_1:+79490482 | Msa1041830:five_prime_UTR |
| GGATAAATTACCTTGTATAG+AGG | 0.532813 | 7_1:-79492387 | None:intergenic |
| CAACTTAATCAATCGTGAAG+AGG | 0.534326 | 7_1:-79495715 | None:intergenic |
| CCTAAAGATTCCTCTATACA+AGG | 0.534980 | 7_1:+79492377 | Msa1041830:CDS |
| AGCGAAAGTACCATCGGATA+CGG | 0.536390 | 7_1:-79490817 | None:intergenic |
| AAGTCCGCCATTGACAAAGC+TGG | 0.537931 | 7_1:+79493418 | Msa1041830:CDS |
| TGCAGCTTCTGAGTTCTACA+AGG | 0.538609 | 7_1:+79493563 | Msa1041830:CDS |
| ATTGGAACGACATTGAAAGT+AGG | 0.539332 | 7_1:-79495438 | None:intergenic |
| GGTGTAACCAGCTTTGTCAA+TGG | 0.547964 | 7_1:-79493425 | None:intergenic |
| GCAACCAAACTTTACTCCAC+CGG | 0.548449 | 7_1:+79495560 | Msa1041830:three_prime_UTR |
| TTCAAGGAAGCCATGAAGAT+GGG | 0.550371 | 7_1:+79492981 | Msa1041830:CDS |
| ATCATTGCACCAGCATTGAT+CGG | 0.553718 | 7_1:+79491927 | Msa1041830:CDS |
| CCCCAACATTCAGGAAAACA+AGG | 0.562910 | 7_1:+79493378 | Msa1041830:CDS |
| GAGGCTCTTGAGTTAAGAGA+TGG | 0.564582 | 7_1:+79491280 | Msa1041830:CDS |
| GGCTGCTATTACCTCCATCA+AGG | 0.566953 | 7_1:+79490623 | Msa1041830:CDS |
| GCTTTCAATGTGATTAATGG+TGG | 0.568679 | 7_1:+79492809 | Msa1041830:CDS |
| CATACTAGAAGCTTTGAAAG+TGG | 0.569484 | 7_1:+79495197 | Msa1041830:exon |
| GGAAGCCATGAAGATGGGTG+TGG | 0.573653 | 7_1:+79492986 | Msa1041830:CDS |
| TCTTGGCAAGGGTGTATCAA+AGG | 0.577692 | 7_1:+79491315 | Msa1041830:CDS |
| CAGACACCGTATAAAATATG+TGG | 0.578912 | 7_1:+79495811 | Msa1041830:three_prime_UTR |
| AGTATGGCTCGACAGGGGTA+CGG | 0.579765 | 7_1:-79495180 | None:intergenic |
| GTGTCCACAGAGAGTTCAGA+AGG | 0.580306 | 7_1:+79494455 | Msa1041830:intron |
| TCTTGCTGTTGGTTTGTCAA+CGG | 0.581023 | 7_1:+79494853 | Msa1041830:CDS |
| TAATATACAGACCTTGGGGT+TGG | 0.582575 | 7_1:-79494364 | None:intergenic |
| AGACACTGCTAATATGGCAT+TGG | 0.587574 | 7_1:-79492325 | None:intergenic |
| GATGGAGGTAATAGCAGCCA+TGG | 0.587616 | 7_1:-79490619 | None:intergenic |
| AACATTCAGGAAAACAAGGA+AGG | 0.590478 | 7_1:+79493382 | Msa1041830:CDS |
| CTGAAAAGAGAACTGTATTG+TGG | 0.590789 | 7_1:+79495772 | Msa1041830:three_prime_UTR |
| CATGGCTTCCTTGAAAGAGG+AGG | 0.591923 | 7_1:-79492973 | None:intergenic |
| CCATTAATCACATTGAAAGC+GGG | 0.594481 | 7_1:-79492806 | None:intergenic |
| ATTAATGGTGGATCACATGC+AGG | 0.595757 | 7_1:+79492821 | Msa1041830:CDS |
| GAACAGGGTCAAATTAAGAC+CGG | 0.596686 | 7_1:+79494965 | Msa1041830:intron |
| CGTCAGATCTTTGACAGTCG+TGG | 0.597878 | 7_1:+79490648 | Msa1041830:CDS |
| AGGATCTGACTATCTTGGCA+AGG | 0.598318 | 7_1:+79491303 | Msa1041830:CDS |
| TGAAGACGAACCTCGACGGT+AGG | 0.599041 | 7_1:-79490675 | None:intergenic |
| AAGCAATAAAACCTGAGGCT+CGG | 0.599744 | 7_1:-79495658 | None:intergenic |
| GTGTCATGACCAGCCACAGA+AGG | 0.602021 | 7_1:+79494684 | Msa1041830:CDS |
| CACGACTGTCAAAGATCTGA+CGG | 0.602120 | 7_1:-79490647 | None:intergenic |
| GCAAGACGCTCTGACCTGCA+AGG | 0.602568 | 7_1:-79494992 | None:intergenic |
| GGATCTGACTATCTTGGCAA+GGG | 0.603603 | 7_1:+79491304 | Msa1041830:CDS |
| ACGACTGTCAAAGATCTGAC+GGG | 0.605306 | 7_1:-79490646 | None:intergenic |
| ATGGGGTTGGTGCAAACAAA+AGG | 0.606880 | 7_1:+79492200 | Msa1041830:CDS |
| ACCATTAATCACATTGAAAG+CGG | 0.610449 | 7_1:-79492807 | None:intergenic |
| GCTTCTAGTATGGCTCGACA+GGG | 0.610899 | 7_1:-79495186 | None:intergenic |
| GACAAAGTTCAAACCTTCTG+TGG | 0.611804 | 7_1:-79494697 | None:intergenic |
| AGCTCTAGCGAAAGTACCAT+CGG | 0.612079 | 7_1:-79490823 | None:intergenic |
| GCTAGAGCTGCTGTTCCTAG+TGG | 0.613085 | 7_1:+79490837 | Msa1041830:CDS |
| GAGCACTATGCTAAGATGAC+CGG | 0.616214 | 7_1:+79494294 | Msa1041830:CDS |
| GATCTGACGGGCCTTGATGG+AGG | 0.617525 | 7_1:-79490634 | None:intergenic |
| TTTGTTGTATACGTAGCCAG+TGG | 0.625526 | 7_1:-79495536 | None:intergenic |
| ATTGACAAAGCTGGTTACAC+CGG | 0.627043 | 7_1:+79493427 | Msa1041830:CDS |
| ATACCAGTGGATGCACCACT+AGG | 0.628478 | 7_1:-79490852 | None:intergenic |
| GATGCAAACCGACCTTCAGA+TGG | 0.629057 | 7_1:-79493019 | None:intergenic |
| CAATAAAACCTGAGGCTCGG+TGG | 0.630433 | 7_1:-79495655 | None:intergenic |
| GCTCTTGAGTTAAGAGATGG+AGG | 0.631055 | 7_1:+79491283 | Msa1041830:CDS |
| TGTTTGCAGTGGAGAGACTG+AGG | 0.633750 | 7_1:+79494814 | Msa1041830:intron |
| CTAATTATTAGGTATTTACG+AGG | 0.636389 | 7_1:+79491261 | Msa1041830:intron |
| TTGTTGTATACGTAGCCAGT+GGG | 0.637900 | 7_1:-79495535 | None:intergenic |
| GGCTTCAATACTCTCAGTCA+CGG | 0.640921 | 7_1:-79494633 | None:intergenic |
| TGCACCAGCATTGATCGGCA+AGG | 0.641409 | 7_1:+79491932 | Msa1041830:CDS |
| GCAGCTATTGAGAATTGAGG+AGG | 0.642636 | 7_1:+79495120 | Msa1041830:intron |
| GAAGTGAAGACGAACCTCGA+CGG | 0.646889 | 7_1:-79490679 | None:intergenic |
| TCAAAAGTATCACTACCCAC+TGG | 0.647418 | 7_1:+79495520 | Msa1041830:three_prime_UTR |
| GGTCAAGATGCAGTAAATGT+TGG | 0.647677 | 7_1:+79493337 | Msa1041830:CDS |
| GCGTCTTGCCAAGTACAACC+AGG | 0.651331 | 7_1:+79495006 | Msa1041830:CDS |
| TAGCCAACCCAAGCAACCGG+TGG | 0.655770 | 7_1:-79495576 | None:intergenic |
| TGAGCAATGAGATTTGGCTG+CGG | 0.657198 | 7_1:+79495245 | Msa1041830:three_prime_UTR |
| GGAAGTCTATCACCATCTGA+AGG | 0.660829 | 7_1:+79493007 | Msa1041830:CDS |
| TGCAATGATGGTGTTCACGT+TGG | 0.669626 | 7_1:-79491913 | None:intergenic |
| GTAACCAGCTTTGTCAATGG+CGG | 0.670465 | 7_1:-79493422 | None:intergenic |
| TCTCTTGGTTACCAACCCCA+AGG | 0.674267 | 7_1:+79494353 | Msa1041830:CDS |
| GAACTGTTAATGAATGGGGT+TGG | 0.674740 | 7_1:+79492187 | Msa1041830:CDS |
| TTGTAAAGACAGATGCGTTG+TGG | 0.674792 | 7_1:+79495735 | Msa1041830:three_prime_UTR |
| GTTGATATAACCGTATCCGA+TGG | 0.679936 | 7_1:+79490807 | Msa1041830:CDS |
| AGTTCAAGCAATAAAACCTG+AGG | 0.680048 | 7_1:-79495663 | None:intergenic |
| CTCACAGAAGATATCTGGAG+AGG | 0.680128 | 7_1:+79494191 | Msa1041830:CDS |
| GACGGAACTGTTAATGAATG+GGG | 0.691515 | 7_1:+79492183 | Msa1041830:CDS |
| GTAAATGTTGGTGATGAAGG+TGG | 0.697402 | 7_1:+79493349 | Msa1041830:CDS |
| TCGTGGCAATCCTACCGTCG+AGG | 0.699567 | 7_1:+79490665 | Msa1041830:CDS |
| AGCTTCTGAGTTCTACAAGG+AGG | 0.702282 | 7_1:+79493566 | Msa1041830:CDS |
| TTGACAATCCAGAACAACGA+CGG | 0.703661 | 7_1:+79494168 | Msa1041830:intron |
| CTTCTAGTATGGCTCGACAG+GGG | 0.721455 | 7_1:-79495185 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTCAAAAATAAAATTAAA+CGG | - | chr7_1:79491242-79491261 | None:intergenic | 10.0% |
| !!! | TATTTTTGAAACTAATTATT+AGG | + | chr7_1:79491250-79491269 | Msa1041830:intron | 10.0% |
| !! | AGTTGTATATATAAATAAAA+TGG | - | chr7_1:79493964-79493983 | None:intergenic | 10.0% |
| !!! | ATGAATTTTTTTTATTCTTT+TGG | + | chr7_1:79494388-79494407 | Msa1041830:intron | 10.0% |
| !!! | TGAATTTTTTTTATTCTTTT+GGG | + | chr7_1:79494389-79494408 | Msa1041830:intron | 10.0% |
| !! | AATCTGATTATGATTATTAT+AGG | + | chr7_1:79490785-79490804 | Msa1041830:intron | 15.0% |
| !!! | TTTTTGTGTGTTAATTATTA+TGG | + | chr7_1:79490931-79490950 | Msa1041830:intron | 15.0% |
| !! | TTGAAAATCATCATAAATAA+CGG | - | chr7_1:79490983-79491002 | None:intergenic | 15.0% |
| !!! | TAATAACTTGATATATCTTT+TGG | - | chr7_1:79491482-79491501 | None:intergenic | 15.0% |
| !!! | TGTATTCATCTAATATTTTT+TGG | + | chr7_1:79492514-79492533 | Msa1041830:intron | 15.0% |
| !!! | ATCTAATATTTTTTGGTATT+CGG | + | chr7_1:79492521-79492540 | Msa1041830:intron | 15.0% |
| !! | ATAAAAAGGTCAAAATTTAT+TGG | - | chr7_1:79495342-79495361 | None:intergenic | 15.0% |
| !!! | ATTTTGACCTTTTTATTTTA+TGG | + | chr7_1:79495346-79495365 | Msa1041830:three_prime_UTR | 15.0% |
| !!! | TTTTGACCTTTTTATTTTAT+GGG | + | chr7_1:79495347-79495366 | Msa1041830:three_prime_UTR | 15.0% |
| !!! | TTTTCATCAATTCTATTTTG+TGG | + | chr7_1:79490890-79490909 | Msa1041830:intron | 20.0% |
| !! | GAAATCTACTTAAATATCTA+TGG | - | chr7_1:79491161-79491180 | None:intergenic | 20.0% |
| !! | TTAAGAAACAGAAAATATGA+TGG | - | chr7_1:79491352-79491371 | None:intergenic | 20.0% |
| !! | AAATAGAACGAAATGAAAAT+AGG | - | chr7_1:79491553-79491572 | None:intergenic | 20.0% |
| !!! | GTCTTTTATTTTGTCTTTTT+TGG | + | chr7_1:79491573-79491592 | Msa1041830:intron | 20.0% |
| !!! | TTTATTTTGTCTTTTTTGGA+AGG | + | chr7_1:79491577-79491596 | Msa1041830:intron | 20.0% |
| !!! | TTGGTAGTTTTTAATCATAA+AGG | - | chr7_1:79491649-79491668 | None:intergenic | 20.0% |
| !! | TTATGATTAAAAACTACCAA+TGG | + | chr7_1:79491649-79491668 | Msa1041830:intron | 20.0% |
| !! | ATGATAAAAAAAACTGTCAT+CGG | - | chr7_1:79492008-79492027 | None:intergenic | 20.0% |
| !! | TCACTTAACTATACTATAAT+GGG | - | chr7_1:79492034-79492053 | None:intergenic | 20.0% |
| !! | TTCACTTAACTATACTATAA+TGG | - | chr7_1:79492035-79492054 | None:intergenic | 20.0% |
| !! | AAAATTAATTCCATTACTAG+AGG | + | chr7_1:79492073-79492092 | Msa1041830:intron | 20.0% |
| !!! | AAAATTTAGATAATGCCTTT+TGG | - | chr7_1:79493064-79493083 | None:intergenic | 20.0% |
| !!! | AGATTTGTTTCATATTATTG+AGG | - | chr7_1:79493093-79493112 | None:intergenic | 20.0% |
| !! | TATAAATAAAATGGCTAACA+AGG | - | chr7_1:79493955-79493974 | None:intergenic | 20.0% |
| !! | TATATATACAACTTGAAAGA+TGG | + | chr7_1:79493971-79493990 | Msa1041830:intron | 20.0% |
| !! | TACAAATTAATATACGACAT+TGG | + | chr7_1:79494046-79494065 | Msa1041830:intron | 20.0% |
| !!! | TCAACATAAATGTTTTTTTG+AGG | - | chr7_1:79494113-79494132 | None:intergenic | 20.0% |
| !! | AAAAGGAAACGTTATTATAT+TGG | - | chr7_1:79494930-79494949 | None:intergenic | 20.0% |
| !!! | TTTGACCTTTTTATTTTATG+GGG | + | chr7_1:79495348-79495367 | Msa1041830:three_prime_UTR | 20.0% |
| !! | TAATTAGACGTCATAAAATT+TGG | + | chr7_1:79495605-79495624 | Msa1041830:three_prime_UTR | 20.0% |
| !! | TACGATAAACAAATTAGATT+TGG | + | chr7_1:79495871-79495890 | Msa1041830:three_prime_UTR | 20.0% |
| ! | CTAATTATTAGGTATTTACG+AGG | + | chr7_1:79491261-79491280 | Msa1041830:intron | 25.0% |
| !! | AAAGTATTTCTCCTAATGAA+GGG | - | chr7_1:79491418-79491437 | None:intergenic | 25.0% |
| !!! | AAAAGTATTTCTCCTAATGA+AGG | - | chr7_1:79491419-79491438 | None:intergenic | 25.0% |
| !!! | TTGTGCTTTAGATTTCTTTT+TGG | + | chr7_1:79491516-79491535 | Msa1041830:intron | 25.0% |
| ! | TTTCCATTCCTTCATAAAAT+AGG | - | chr7_1:79491621-79491640 | None:intergenic | 25.0% |
| ! | TTGAGAAAAGAAATGAATGA+AGG | - | chr7_1:79491686-79491705 | None:intergenic | 25.0% |
| ! | ACCAAAAAAGAAATGAAACA+AGG | - | chr7_1:79491737-79491756 | None:intergenic | 25.0% |
| !! | TATTACATTAGTGTTTTCTC+TGG | + | chr7_1:79491969-79491988 | Msa1041830:intron | 25.0% |
| ! | CACTTAACTATACTATAATG+GGG | - | chr7_1:79492033-79492052 | None:intergenic | 25.0% |
| ! | AAAAAACAATCAGAACTAGA+AGG | - | chr7_1:79492284-79492303 | None:intergenic | 25.0% |
| !!! | TTCTAGTTCTGATTGTTTTT+TGG | + | chr7_1:79492283-79492302 | Msa1041830:intron | 25.0% |
| !!! | TTCTGATTGTTTTTTGGTTT+TGG | + | chr7_1:79492289-79492308 | Msa1041830:intron | 25.0% |
| ! | TGGTACTTAACTGTATTTAA+AGG | + | chr7_1:79492418-79492437 | Msa1041830:intron | 25.0% |
| ! | AATGGACATAAAAGAAAACT+GGG | - | chr7_1:79492676-79492695 | None:intergenic | 25.0% |
| ! | AAATGGACATAAAAGAAAAC+TGG | - | chr7_1:79492677-79492696 | None:intergenic | 25.0% |
| ! | AAACGACTCAACTAAAAAAA+TGG | - | chr7_1:79492694-79492713 | None:intergenic | 25.0% |
| !!! | TGTTTTTTACCAGTAATAAG+CGG | + | chr7_1:79493138-79493157 | Msa1041830:intron | 25.0% |
| !! | CTCTATTCAATTTTCTGTTT+CGG | + | chr7_1:79493468-79493487 | Msa1041830:intron | 25.0% |
| !! | AATTTTCTGTTTCGGTTATT+TGG | + | chr7_1:79493476-79493495 | Msa1041830:intron | 25.0% |
| ! | TTCTCAGATTTATTCATTTG+AGG | + | chr7_1:79493500-79493519 | Msa1041830:intron | 25.0% |
| ! | TCTCAGATTTATTCATTTGA+GGG | + | chr7_1:79493501-79493520 | Msa1041830:intron | 25.0% |
| !!! | GTGAATAATTTTGAAGAGAA+GGG | - | chr7_1:79493696-79493715 | None:intergenic | 25.0% |
| !!! | AGTGAATAATTTTGAAGAGA+AGG | - | chr7_1:79493697-79493716 | None:intergenic | 25.0% |
| !! | AACAATAGAAACAGTTCTTT+TGG | + | chr7_1:79493851-79493870 | Msa1041830:intron | 25.0% |
| ! | ATTCTTAACCCTTCTTAAAA+AGG | - | chr7_1:79493906-79493925 | None:intergenic | 25.0% |
| ! | TCATATAATATACAGACCTT+GGG | - | chr7_1:79494372-79494391 | None:intergenic | 25.0% |
| ! | TTCATATAATATACAGACCT+TGG | - | chr7_1:79494373-79494392 | None:intergenic | 25.0% |
| ! | ATCAATACATTTATCTACCT+AGG | - | chr7_1:79494566-79494585 | None:intergenic | 25.0% |
| ! | CAACTGTAAGATATTTAACA+AGG | + | chr7_1:79494755-79494774 | Msa1041830:intron | 25.0% |
| !!! | TCATATATTTTTGTTTGCAG+TGG | + | chr7_1:79494803-79494822 | Msa1041830:intron | 25.0% |
| ! | AACGTTATTATATTGGACAT+GGG | - | chr7_1:79494923-79494942 | None:intergenic | 25.0% |
| ! | AAACGTTATTATATTGGACA+TGG | - | chr7_1:79494924-79494943 | None:intergenic | 25.0% |
| ! | TCAAGATACGATTAACAAAA+AGG | - | chr7_1:79494947-79494966 | None:intergenic | 25.0% |
| !! | TTTGTTGATTACATTTGCTT+CGG | + | chr7_1:79495035-79495054 | Msa1041830:intron | 25.0% |
| ! | ATAAAATTTGGTCATGCATT+AGG | + | chr7_1:79495617-79495636 | Msa1041830:three_prime_UTR | 25.0% |
| ACTATAAATAACCCATAAGC+AGG | + | chr7_1:79490505-79490524 | Msa1041830:five_prime_UTR | 30.0% | |
| ! | AGATTTCGTAGATTTTACTC+TGG | + | chr7_1:79491174-79491193 | Msa1041830:intron | 30.0% |
| ! | CTCAACTACCTATTTTATGA+AGG | + | chr7_1:79491610-79491629 | Msa1041830:intron | 30.0% |
| ! | CTACCTATTTTATGAAGGAA+TGG | + | chr7_1:79491615-79491634 | Msa1041830:intron | 30.0% |
| AAAAAGAAATGAAACAAGGC+AGG | - | chr7_1:79491733-79491752 | None:intergenic | 30.0% | |
| !!! | GCCTTGTTTCATTTCTTTTT+TGG | + | chr7_1:79491733-79491752 | Msa1041830:intron | 30.0% |
| TACTGCATAAAAAAGTGAGA+TGG | + | chr7_1:79491808-79491827 | Msa1041830:intron | 30.0% | |
| !!! | ATTCTCACCTGATTTTTTCT+TGG | + | chr7_1:79491874-79491893 | Msa1041830:intron | 30.0% |
| GGATAAATTACCTTGTATAG+AGG | - | chr7_1:79492390-79492409 | None:intergenic | 30.0% | |
| ATGGACATAAAAGAAAACTG+GGG | - | chr7_1:79492675-79492694 | None:intergenic | 30.0% | |
| ACCATTAATCACATTGAAAG+CGG | - | chr7_1:79492810-79492829 | None:intergenic | 30.0% | |
| TACTGGTAAAAAACAAAGCT+TGG | - | chr7_1:79493133-79493152 | None:intergenic | 30.0% | |
| !!! | GTTTTTTACCAGTAATAAGC+GGG | + | chr7_1:79493139-79493158 | Msa1041830:intron | 30.0% |
| GCTGTGATTAAGAAGAAATA+TGG | + | chr7_1:79493316-79493335 | Msa1041830:CDS | 30.0% | |
| CGAAACAGAAAATTGAATAG+AGG | - | chr7_1:79493470-79493489 | None:intergenic | 30.0% | |
| ATCATACGATTTGAACTTCA+AGG | + | chr7_1:79493593-79493612 | Msa1041830:CDS | 30.0% | |
| TAATAACAACTCTGGTACTA+AGG | - | chr7_1:79493819-79493838 | None:intergenic | 30.0% | |
| GATCCTCAATTGAAACAATT+GGG | - | chr7_1:79494254-79494273 | None:intergenic | 30.0% | |
| ATCACCAACAATTTGTACAT+TGG | - | chr7_1:79494331-79494350 | None:intergenic | 30.0% | |
| CATATAATATACAGACCTTG+GGG | - | chr7_1:79494371-79494390 | None:intergenic | 30.0% | |
| !! | TCAAGGTACTCTCATTTTAT+TGG | + | chr7_1:79494511-79494530 | Msa1041830:intron | 30.0% |
| ! | CTTGACATATTTGAAACAAC+AGG | + | chr7_1:79494595-79494614 | Msa1041830:intron | 30.0% |
| ACAATTGTTGAACTGAGATA+AGG | - | chr7_1:79494884-79494903 | None:intergenic | 30.0% | |
| TTGTTAATCGTATCTTGAAC+AGG | + | chr7_1:79494949-79494968 | Msa1041830:intron | 30.0% | |
| TGTTAATCGTATCTTGAACA+GGG | + | chr7_1:79494950-79494969 | Msa1041830:intron | 30.0% | |
| AAATCTCATTGCTCAAACTA+AGG | - | chr7_1:79495240-79495259 | None:intergenic | 30.0% | |
| ! | TTAGTTTGAGCAATGAGATT+TGG | + | chr7_1:79495239-79495258 | Msa1041830:three_prime_UTR | 30.0% |
| ! | ACACAACTTTAAAAATCCAG+GGG | - | chr7_1:79495386-79495405 | None:intergenic | 30.0% |
| ! | CACACAACTTTAAAAATCCA+GGG | - | chr7_1:79495387-79495406 | None:intergenic | 30.0% |
| GTTACTACTCAACTGAAAAT+TGG | - | chr7_1:79495459-79495478 | None:intergenic | 30.0% | |
| ! | TGAGTAGTAACGATTTTTGT+TGG | + | chr7_1:79495468-79495487 | Msa1041830:three_prime_UTR | 30.0% |
| ACCGTATAAAATATGTGGTT+GGG | + | chr7_1:79495816-79495835 | Msa1041830:three_prime_UTR | 30.0% | |
| ! | ACCCAACCACATATTTTATA+CGG | - | chr7_1:79495820-79495839 | None:intergenic | 30.0% |
| !! | AAAAGAAGCGAGAGTTGATA+GGG | + | chr7_1:79490482-79490501 | Msa1041830:five_prime_UTR | 35.0% |
| ATCGATGAGCGATAATAGAT+CGG | - | chr7_1:79490732-79490751 | None:intergenic | 35.0% | |
| !! | AGATTTTACTCTGGTACTGA+TGG | + | chr7_1:79491183-79491202 | Msa1041830:intron | 35.0% |
| TTCCAGTTATACCCTTCATT+AGG | + | chr7_1:79491404-79491423 | Msa1041830:intron | 35.0% | |
| ATCACAATGACCTCTAGTAA+TGG | - | chr7_1:79492086-79492105 | None:intergenic | 35.0% | |
| GACAGAAATTGACAACTTCA+TGG | + | chr7_1:79492149-79492168 | Msa1041830:CDS | 35.0% | |
| TTGACGGAACTGTTAATGAA+TGG | + | chr7_1:79492181-79492200 | Msa1041830:CDS | 35.0% | |
| TGACGGAACTGTTAATGAAT+GGG | + | chr7_1:79492182-79492201 | Msa1041830:CDS | 35.0% | |
| TGTGATAGATTACGATCTAC+AGG | - | chr7_1:79492242-79492261 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTTTGGTTTCAGCT+TGG | + | chr7_1:79492300-79492319 | Msa1041830:intron | 35.0% |
| CCTTGTATAGAGGAATCTTT+AGG | - | chr7_1:79492380-79492399 | None:intergenic | 35.0% | |
| CCTAAAGATTCCTCTATACA+AGG | + | chr7_1:79492377-79492396 | Msa1041830:CDS | 35.0% | |
| GGTAATTTATCCATGAACTG+TGG | + | chr7_1:79492398-79492417 | Msa1041830:intron | 35.0% | |
| ATTTAAAGGCCTCTGTTAGT+TGG | + | chr7_1:79492432-79492451 | Msa1041830:intron | 35.0% | |
| TCAACTTCAATTACACGACA+TGG | - | chr7_1:79492460-79492479 | None:intergenic | 35.0% | |
| TTCGGTACTTAAGAACAACA+TGG | + | chr7_1:79492539-79492558 | Msa1041830:intron | 35.0% | |
| CAAAACCAAGTTCTTGTTAC+CGG | - | chr7_1:79492780-79492799 | None:intergenic | 35.0% | |
| CCATTAATCACATTGAAAGC+GGG | - | chr7_1:79492809-79492828 | None:intergenic | 35.0% | |
| GCTTTCAATGTGATTAATGG+TGG | + | chr7_1:79492809-79492828 | Msa1041830:CDS | 35.0% | |
| ATTCGTTTACCTCTTCCAAA+AGG | + | chr7_1:79493046-79493065 | Msa1041830:intron | 35.0% | |
| !! | TAGATAATGCCTTTTGGAAG+AGG | - | chr7_1:79493058-79493077 | None:intergenic | 35.0% |
| TCTATCCACATATGCTTTGA+TGG | + | chr7_1:79493215-79493234 | Msa1041830:intron | 35.0% | |
| AAGAACCATCAAAGCATATG+TGG | - | chr7_1:79493223-79493242 | None:intergenic | 35.0% | |
| GTTCCTTCTGATATCATTTC+AGG | + | chr7_1:79493294-79493313 | Msa1041830:intron | 35.0% | |
| !!! | TCCTTGTTTTCCTGAATGTT+GGG | - | chr7_1:79493382-79493401 | None:intergenic | 35.0% |
| !!! | TTCCTTGTTTTCCTGAATGT+TGG | - | chr7_1:79493383-79493402 | None:intergenic | 35.0% |
| AACATTCAGGAAAACAAGGA+AGG | + | chr7_1:79493382-79493401 | Msa1041830:CDS | 35.0% | |
| GGAGAAAAAACTTACTTTGC+CGG | - | chr7_1:79493449-79493468 | None:intergenic | 35.0% | |
| ! | CAATGTTCTTAGGTTGTCAT+TGG | + | chr7_1:79493531-79493550 | Msa1041830:intron | 35.0% |
| ! | TTCTTAGGTTGTCATTGGAA+TGG | + | chr7_1:79493536-79493555 | Msa1041830:intron | 35.0% |
| !! | ATTTTGAAGAGAAGGGAGTA+AGG | - | chr7_1:79493689-79493708 | None:intergenic | 35.0% |
| AAAGAGTGAGAAAGGAAAGT+CGG | - | chr7_1:79493728-79493747 | None:intergenic | 35.0% | |
| ! | ACTTTCCTTTCTCACTCTTT+TGG | + | chr7_1:79493728-79493747 | Msa1041830:intron | 35.0% |
| AGGCTTTCTAATAACAACTC+TGG | - | chr7_1:79493827-79493846 | None:intergenic | 35.0% | |
| ! | AGAGTTGTTATTAGAAAGCC+TGG | + | chr7_1:79493826-79493845 | Msa1041830:intron | 35.0% |
| ! | GAGTTGTTATTAGAAAGCCT+GGG | + | chr7_1:79493827-79493846 | Msa1041830:intron | 35.0% |
| !! | AACTGTTTCTATTGTTACCC+AGG | - | chr7_1:79493847-79493866 | None:intergenic | 35.0% |
| ! | AGAAACAGTTCTTTTGGCAA+AGG | + | chr7_1:79493857-79493876 | Msa1041830:intron | 35.0% |
| ! | GAAACAGTTCTTTTGGCAAA+GGG | + | chr7_1:79493858-79493877 | Msa1041830:intron | 35.0% |
| !! | ATATCCGCTCCTTTTTAAGA+AGG | + | chr7_1:79493894-79493913 | Msa1041830:intron | 35.0% |
| !! | TATCCGCTCCTTTTTAAGAA+GGG | + | chr7_1:79493895-79493914 | Msa1041830:intron | 35.0% |
| TAACCCTTCTTAAAAAGGAG+CGG | - | chr7_1:79493901-79493920 | None:intergenic | 35.0% | |
| GTACCCAATTGTTTCAATTG+AGG | + | chr7_1:79494248-79494267 | Msa1041830:CDS | 35.0% | |
| GGATCCTCAATTGAAACAAT+TGG | - | chr7_1:79494255-79494274 | None:intergenic | 35.0% | |
| GGAACCAATGTACAAATTGT+TGG | + | chr7_1:79494324-79494343 | Msa1041830:CDS | 35.0% | |
| !! | AATTGTTGGTGATGATCTCT+TGG | + | chr7_1:79494338-79494357 | Msa1041830:CDS | 35.0% |
| AGCAAAAAGCAACAAATCAG+AGG | - | chr7_1:79494433-79494452 | None:intergenic | 35.0% | |
| AAACAACAGGTCAACCAAAT+TGG | + | chr7_1:79494608-79494627 | Msa1041830:intron | 35.0% | |
| GTAATCAACAAACACTAACC+TGG | - | chr7_1:79495027-79495046 | None:intergenic | 35.0% | |
| AAGCTCAAGCAGTTTCTAAT+TGG | + | chr7_1:79495083-79495102 | Msa1041830:intron | 35.0% | |
| TCAAGCAGTTTCTAATTGGT+TGG | + | chr7_1:79495087-79495106 | Msa1041830:intron | 35.0% | |
| CACTTTCAAAGCTTCTAGTA+TGG | - | chr7_1:79495199-79495218 | None:intergenic | 35.0% | |
| !! | CATACTAGAAGCTTTGAAAG+TGG | + | chr7_1:79495197-79495216 | Msa1041830:exon | 35.0% |
| !! | AGCTTTGAAAGTGGAAAAAC+CGG | + | chr7_1:79495206-79495225 | Msa1041830:three_prime_UTR | 35.0% |
| ! | TCAAACTAAGGTTGGTTATC+CGG | - | chr7_1:79495228-79495247 | None:intergenic | 35.0% |
| GTCAGCCCCATAAAATAAAA+AGG | - | chr7_1:79495356-79495375 | None:intergenic | 35.0% | |
| ! | CCACACAACTTTAAAAATCC+AGG | - | chr7_1:79495388-79495407 | None:intergenic | 35.0% |
| !!! | CCTGGATTTTTAAAGTTGTG+TGG | + | chr7_1:79495385-79495404 | Msa1041830:three_prime_UTR | 35.0% |
| ATTGGAACGACATTGAAAGT+AGG | - | chr7_1:79495441-79495460 | None:intergenic | 35.0% | |
| AGTTCAAGCAATAAAACCTG+AGG | - | chr7_1:79495666-79495685 | None:intergenic | 35.0% | |
| CAACTTAATCAATCGTGAAG+AGG | - | chr7_1:79495718-79495737 | None:intergenic | 35.0% | |
| CTGAAAAGAGAACTGTATTG+TGG | + | chr7_1:79495772-79495791 | Msa1041830:three_prime_UTR | 35.0% | |
| CAGACACCGTATAAAATATG+TGG | + | chr7_1:79495811-79495830 | Msa1041830:three_prime_UTR | 35.0% | |
| CACCGTATAAAATATGTGGT+TGG | + | chr7_1:79495815-79495834 | Msa1041830:three_prime_UTR | 35.0% | |
| AAATATGTGGTTGGGTGTTT+AGG | + | chr7_1:79495824-79495843 | Msa1041830:three_prime_UTR | 35.0% | |
| !! | TCACATCGATTTCTTCTCCA+TGG | + | chr7_1:79490602-79490621 | Msa1041830:exon | 40.0% |
| GTTGATATAACCGTATCCGA+TGG | + | chr7_1:79490807-79490826 | Msa1041830:CDS | 40.0% | |
| ! | CTCCTAATGAAGGGTATAAC+TGG | - | chr7_1:79491409-79491428 | None:intergenic | 40.0% |
| GAAATGAATGAAGGCTCAGA+AGG | - | chr7_1:79491677-79491696 | None:intergenic | 40.0% | |
| !! | ATCATTGCACCAGCATTGAT+CGG | + | chr7_1:79491927-79491946 | Msa1041830:CDS | 40.0% |
| CAATTTCTGTCTGCTGAGTT+GGG | - | chr7_1:79492140-79492159 | None:intergenic | 40.0% | |
| TCAATTTCTGTCTGCTGAGT+TGG | - | chr7_1:79492141-79492160 | None:intergenic | 40.0% | |
| TTCATGGTTCAGAAGCTTGA+CGG | + | chr7_1:79492165-79492184 | Msa1041830:CDS | 40.0% | |
| GACGGAACTGTTAATGAATG+GGG | + | chr7_1:79492183-79492202 | Msa1041830:CDS | 40.0% | |
| GAACTGTTAATGAATGGGGT+TGG | + | chr7_1:79492187-79492206 | Msa1041830:CDS | 40.0% | |
| AGACACTGCTAATATGGCAT+TGG | - | chr7_1:79492328-79492347 | None:intergenic | 40.0% | |
| TGCAAGAGACACTGCTAATA+TGG | - | chr7_1:79492334-79492353 | None:intergenic | 40.0% | |
| CAGTTAAGTACCACAGTTCA+TGG | - | chr7_1:79492411-79492430 | None:intergenic | 40.0% | |
| ACTTCTTTATGTCCATTCCG+TGG | + | chr7_1:79492732-79492751 | Msa1041830:intron | 40.0% | |
| CTTCTTTATGTCCATTCCGT+GGG | + | chr7_1:79492733-79492752 | Msa1041830:intron | 40.0% | |
| CAGCATATTGCAAACATTGC+CGG | + | chr7_1:79492758-79492777 | Msa1041830:intron | 40.0% | |
| CCCGCTTTCAATGTGATTAA+TGG | + | chr7_1:79492806-79492825 | Msa1041830:CDS | 40.0% | |
| !! | ATTAATGGTGGATCACATGC+AGG | + | chr7_1:79492821-79492840 | Msa1041830:CDS | 40.0% |
| AGGAAACAAACTTGCAATGC+AGG | + | chr7_1:79492841-79492860 | Msa1041830:CDS | 40.0% | |
| TTCTGATGTCATGCATATGC+AGG | + | chr7_1:79492926-79492945 | Msa1041830:intron | 40.0% | |
| CATGCATATGCAGGAGTTTA+TGG | + | chr7_1:79492935-79492954 | Msa1041830:intron | 40.0% | |
| GAGTTTATGGTTCTTCCTGT+TGG | + | chr7_1:79492948-79492967 | Msa1041830:CDS | 40.0% | |
| TTTCAAGGAAGCCATGAAGA+TGG | + | chr7_1:79492980-79492999 | Msa1041830:CDS | 40.0% | |
| TTCAAGGAAGCCATGAAGAT+GGG | + | chr7_1:79492981-79493000 | Msa1041830:CDS | 40.0% | |
| !! | TAAAAGCACCCGCTTATTAC+TGG | - | chr7_1:79493150-79493169 | None:intergenic | 40.0% |
| ! | TAATAAGCGGGTGCTTTTAC+TGG | + | chr7_1:79493151-79493170 | Msa1041830:intron | 40.0% |
| CAGCCTGAAATGATATCAGA+AGG | - | chr7_1:79493300-79493319 | None:intergenic | 40.0% | |
| GGTCAAGATGCAGTAAATGT+TGG | + | chr7_1:79493337-79493356 | Msa1041830:CDS | 40.0% | |
| !! | GCAGTAAATGTTGGTGATGA+AGG | + | chr7_1:79493346-79493365 | Msa1041830:CDS | 40.0% |
| !! | GTAAATGTTGGTGATGAAGG+TGG | + | chr7_1:79493349-79493368 | Msa1041830:CDS | 40.0% |
| !! | CTTGTTTTCCTGAATGTTGG+GGG | - | chr7_1:79493380-79493399 | None:intergenic | 40.0% |
| !!! | CCTTGTTTTCCTGAATGTTG+GGG | - | chr7_1:79493381-79493400 | None:intergenic | 40.0% |
| TCAGGAAAACAAGGAAGGTT+TGG | + | chr7_1:79493387-79493406 | Msa1041830:CDS | 40.0% | |
| ATTGACAAAGCTGGTTACAC+CGG | + | chr7_1:79493427-79493446 | Msa1041830:CDS | 40.0% | |
| GGGAGTTTGACAATGTTCTT+AGG | + | chr7_1:79493521-79493540 | Msa1041830:intron | 40.0% | |
| ! | AAGGATTTGAGACTTCTGAG+CGG | - | chr7_1:79493670-79493689 | None:intergenic | 40.0% |
| AAGCACCAAAAGAGTGAGAA+AGG | - | chr7_1:79493736-79493755 | None:intergenic | 40.0% | |
| CTAAGGTGTATAATCAGCAC+AGG | - | chr7_1:79493802-79493821 | None:intergenic | 40.0% | |
| TTGACAATCCAGAACAACGA+CGG | + | chr7_1:79494168-79494187 | Msa1041830:intron | 40.0% | |
| ! | AATTGAGGATCCTTTTGACC+AGG | + | chr7_1:79494263-79494282 | Msa1041830:CDS | 40.0% |
| !! | TACATTGGTTCCAATCTCAC+CGG | - | chr7_1:79494316-79494335 | None:intergenic | 40.0% |
| TAATATACAGACCTTGGGGT+TGG | - | chr7_1:79494367-79494386 | None:intergenic | 40.0% | |
| ! | ATGCAATGCTCTTTTGCTCA+AGG | + | chr7_1:79494494-79494513 | Msa1041830:CDS | 40.0% |
| ! | GGCAAATATTTTCTGCAGAG+AGG | + | chr7_1:79494532-79494551 | Msa1041830:intron | 40.0% |
| GACAAAGTTCAAACCTTCTG+TGG | - | chr7_1:79494700-79494719 | None:intergenic | 40.0% | |
| AACAGCAAGATCAGCAATGA+AGG | - | chr7_1:79494843-79494862 | None:intergenic | 40.0% | |
| ! | TTCATTGCTGATCTTGCTGT+TGG | + | chr7_1:79494842-79494861 | Msa1041830:CDS | 40.0% |
| !! | TCTTGCTGTTGGTTTGTCAA+CGG | + | chr7_1:79494853-79494872 | Msa1041830:CDS | 40.0% |
| GAACAGGGTCAAATTAAGAC+CGG | + | chr7_1:79494965-79494984 | Msa1041830:intron | 40.0% | |
| AACACTAACCTGGTTGTACT+TGG | - | chr7_1:79495017-79495036 | None:intergenic | 40.0% | |
| TACATTTGCTTCGGTTGCTT+CGG | + | chr7_1:79495044-79495063 | Msa1041830:intron | 40.0% | |
| TTGGCAGCTATTGAGAATTG+AGG | + | chr7_1:79495117-79495136 | Msa1041830:intron | 40.0% | |
| CTCATTGCTCAAACTAAGGT+TGG | - | chr7_1:79495236-79495255 | None:intergenic | 40.0% | |
| !! | TCAAAAGTATCACTACCCAC+TGG | + | chr7_1:79495520-79495539 | Msa1041830:three_prime_UTR | 40.0% |
| TTGTTGTATACGTAGCCAGT+GGG | - | chr7_1:79495538-79495557 | None:intergenic | 40.0% | |
| ! | TTTGTTGTATACGTAGCCAG+TGG | - | chr7_1:79495539-79495558 | None:intergenic | 40.0% |
| AAGCAATAAAACCTGAGGCT+CGG | - | chr7_1:79495661-79495680 | None:intergenic | 40.0% | |
| TTGTAAAGACAGATGCGTTG+TGG | + | chr7_1:79495735-79495754 | Msa1041830:three_prime_UTR | 40.0% | |
| ! | AGAGTGCGTGTTTTGTGTGA+GGG | - | chr7_1:79490540-79490559 | None:intergenic | 45.0% |
| !! | AAGAGTGCGTGTTTTGTGTG+AGG | - | chr7_1:79490541-79490560 | None:intergenic | 45.0% |
| ACGACTGTCAAAGATCTGAC+GGG | - | chr7_1:79490649-79490668 | None:intergenic | 45.0% | |
| CACGACTGTCAAAGATCTGA+CGG | - | chr7_1:79490650-79490669 | None:intergenic | 45.0% | |
| !! | AGCGAAAGTACCATCGGATA+CGG | - | chr7_1:79490820-79490839 | None:intergenic | 45.0% |
| !! | AGCTCTAGCGAAAGTACCAT+CGG | - | chr7_1:79490826-79490845 | None:intergenic | 45.0% |
| GAGTGAAGCATACATACCAG+TGG | - | chr7_1:79490868-79490887 | None:intergenic | 45.0% | |
| GAGGCTCTTGAGTTAAGAGA+TGG | + | chr7_1:79491280-79491299 | Msa1041830:CDS | 45.0% | |
| GCTCTTGAGTTAAGAGATGG+AGG | + | chr7_1:79491283-79491302 | Msa1041830:CDS | 45.0% | |
| GATGGAGGATCTGACTATCT+TGG | + | chr7_1:79491298-79491317 | Msa1041830:CDS | 45.0% | |
| AGGATCTGACTATCTTGGCA+AGG | + | chr7_1:79491303-79491322 | Msa1041830:CDS | 45.0% | |
| GGATCTGACTATCTTGGCAA+GGG | + | chr7_1:79491304-79491323 | Msa1041830:CDS | 45.0% | |
| ! | TCTTGGCAAGGGTGTATCAA+AGG | + | chr7_1:79491315-79491334 | Msa1041830:CDS | 45.0% |
| GCAGGTGCCAAGAAAAAATC+AGG | - | chr7_1:79491884-79491903 | None:intergenic | 45.0% | |
| !!! | GATTTTTTCTTGGCACCTGC+AGG | + | chr7_1:79491884-79491903 | Msa1041830:intron | 45.0% |
| ! | TGCAATGATGGTGTTCACGT+TGG | - | chr7_1:79491916-79491935 | None:intergenic | 45.0% |
| GATCAATGCTGGTGCAATGA+TGG | - | chr7_1:79491928-79491947 | None:intergenic | 45.0% | |
| CTTGCCTTTATGCAACGAAC+AGG | + | chr7_1:79492113-79492132 | Msa1041830:intron | 45.0% | |
| !! | ATGGGGTTGGTGCAAACAAA+AGG | + | chr7_1:79492200-79492219 | Msa1041830:CDS | 45.0% |
| GACATGGATCCAACTAACAG+AGG | - | chr7_1:79492444-79492463 | None:intergenic | 45.0% | |
| TTTGCAATATGCTGCACCCA+CGG | - | chr7_1:79492752-79492771 | None:intergenic | 45.0% | |
| CATTGCCGGTAACAAGAACT+TGG | + | chr7_1:79492772-79492791 | Msa1041830:CDS | 45.0% | |
| ATCACATTGAAAGCGGGAAC+AGG | - | chr7_1:79492803-79492822 | None:intergenic | 45.0% | |
| CAAACTCAAGCACACGAGAA+CGG | - | chr7_1:79492882-79492901 | None:intergenic | 45.0% | |
| CTTCATGGCTTCCTTGAAAG+AGG | - | chr7_1:79492979-79492998 | None:intergenic | 45.0% | |
| GGAAGTCTATCACCATCTGA+AGG | + | chr7_1:79493007-79493026 | Msa1041830:CDS | 45.0% | |
| GTCTATCACCATCTGAAGGT+CGG | + | chr7_1:79493011-79493030 | Msa1041830:intron | 45.0% | |
| GCATATGTGGATAGACACCA+GGG | - | chr7_1:79493210-79493229 | None:intergenic | 45.0% | |
| AGCATATGTGGATAGACACC+AGG | - | chr7_1:79493211-79493230 | None:intergenic | 45.0% | |
| CCCCAACATTCAGGAAAACA+AGG | + | chr7_1:79493378-79493397 | Msa1041830:CDS | 45.0% | |
| ! | GTAACCAGCTTTGTCAATGG+CGG | - | chr7_1:79493425-79493444 | None:intergenic | 45.0% |
| ! | GGTGTAACCAGCTTTGTCAA+TGG | - | chr7_1:79493428-79493447 | None:intergenic | 45.0% |
| TGCAGCTTCTGAGTTCTACA+AGG | + | chr7_1:79493563-79493582 | Msa1041830:CDS | 45.0% | |
| AGCTTCTGAGTTCTACAAGG+AGG | + | chr7_1:79493566-79493585 | Msa1041830:CDS | 45.0% | |
| ! | AGGATTTGAGACTTCTGAGC+GGG | - | chr7_1:79493669-79493688 | None:intergenic | 45.0% |
| TGAGAAAGGAAAGTCGGTTG+GGG | - | chr7_1:79493722-79493741 | None:intergenic | 45.0% | |
| GTGAGAAAGGAAAGTCGGTT+GGG | - | chr7_1:79493723-79493742 | None:intergenic | 45.0% | |
| AGTGAGAAAGGAAAGTCGGT+TGG | - | chr7_1:79493724-79493743 | None:intergenic | 45.0% | |
| AGGTGTATAATCAGCACAGG+AGG | - | chr7_1:79493799-79493818 | None:intergenic | 45.0% | |
| CTCACAGAAGATATCTGGAG+AGG | + | chr7_1:79494191-79494210 | Msa1041830:CDS | 45.0% | |
| ! | ATCCTTTTGACCAGGATGAC+TGG | + | chr7_1:79494271-79494290 | Msa1041830:CDS | 45.0% |
| ! | TCCTTTTGACCAGGATGACT+GGG | + | chr7_1:79494272-79494291 | Msa1041830:CDS | 45.0% |
| GAGCACTATGCTAAGATGAC+CGG | + | chr7_1:79494294-79494313 | Msa1041830:CDS | 45.0% | |
| ATTGCCTTCTGAACTCTCTG+TGG | - | chr7_1:79494462-79494481 | None:intergenic | 45.0% | |
| GCAGAGAGGTTATTAGACCT+AGG | + | chr7_1:79494546-79494565 | Msa1041830:intron | 45.0% | |
| TCTCAGTCACGGATCCAATT+TGG | - | chr7_1:79494625-79494644 | None:intergenic | 45.0% | |
| GGCTTCAATACTCTCAGTCA+CGG | - | chr7_1:79494636-79494655 | None:intergenic | 45.0% | |
| ! | AGCCTTTTTGGACATCCTGA+CGG | - | chr7_1:79494657-79494676 | None:intergenic | 45.0% |
| GATGTCCAAAAAGGCTGGAT+GGG | + | chr7_1:79494661-79494680 | Msa1041830:CDS | 45.0% | |
| ATGTCCAAAAAGGCTGGATG+GGG | + | chr7_1:79494662-79494681 | Msa1041830:CDS | 45.0% | |
| AAGTTCAAACCTTCTGTGGC+TGG | - | chr7_1:79494696-79494715 | None:intergenic | 45.0% | |
| ! | CTAATTGGTTGGTGCTCACT+TGG | + | chr7_1:79495098-79495117 | Msa1041830:intron | 45.0% |
| GCAGCTATTGAGAATTGAGG+AGG | + | chr7_1:79495120-79495139 | Msa1041830:intron | 45.0% | |
| TTGAGAATTGAGGAGGAGCT+TGG | + | chr7_1:79495127-79495146 | Msa1041830:CDS | 45.0% | |
| TGAGCAATGAGATTTGGCTG+CGG | + | chr7_1:79495245-79495264 | Msa1041830:three_prime_UTR | 45.0% | |
| GCAACCAAACTTTACTCCAC+CGG | + | chr7_1:79495560-79495579 | Msa1041830:three_prime_UTR | 45.0% | |
| ATATAGCCAACCCAAGCAAC+CGG | - | chr7_1:79495582-79495601 | None:intergenic | 45.0% | |
| !! | TTTGAAAAATATTATAAAAT+AGG | + | chr7_1:79491117-79491136 | Msa1041830:intron | 5.0% |
| GGTCTCAGACACCTGCTTAT+GGG | - | chr7_1:79490519-79490538 | None:intergenic | 50.0% | |
| GATGGAGGTAATAGCAGCCA+TGG | - | chr7_1:79490622-79490641 | None:intergenic | 50.0% | |
| GGCTGCTATTACCTCCATCA+AGG | + | chr7_1:79490623-79490642 | Msa1041830:CDS | 50.0% | |
| ! | AAAGATCTGACGGGCCTTGA+TGG | - | chr7_1:79490640-79490659 | None:intergenic | 50.0% |
| CGTCAGATCTTTGACAGTCG+TGG | + | chr7_1:79490648-79490667 | Msa1041830:CDS | 50.0% | |
| GAAGTGAAGACGAACCTCGA+CGG | - | chr7_1:79490682-79490701 | None:intergenic | 50.0% | |
| ATACCAGTGGATGCACCACT+AGG | - | chr7_1:79490855-79490874 | None:intergenic | 50.0% | |
| GAAGGCTCAGAAGGATCCAT+TGG | - | chr7_1:79491668-79491687 | None:intergenic | 50.0% | |
| CATACCTTGCCGATCAATGC+TGG | - | chr7_1:79491939-79491958 | None:intergenic | 50.0% | |
| GGGTCCTGTTCGTTGCATAA+AGG | - | chr7_1:79492120-79492139 | None:intergenic | 50.0% | |
| TCTCTTGCAGTGTGCAAAGC+TGG | + | chr7_1:79492345-79492364 | Msa1041830:CDS | 50.0% | |
| AATATGCTGCACCCACGGAA+TGG | - | chr7_1:79492747-79492766 | None:intergenic | 50.0% | |
| TTGAAAGAGGAGGCTCCAAC+AGG | - | chr7_1:79492966-79492985 | None:intergenic | 50.0% | |
| TGTTGGAGCCTCCTCTTTCA+AGG | + | chr7_1:79492965-79492984 | Msa1041830:CDS | 50.0% | |
| CATGGCTTCCTTGAAAGAGG+AGG | - | chr7_1:79492976-79492995 | None:intergenic | 50.0% | |
| GACTTCCACACCCATCTTCA+TGG | - | chr7_1:79492994-79493013 | None:intergenic | 50.0% | |
| GATGCAAACCGACCTTCAGA+TGG | - | chr7_1:79493022-79493041 | None:intergenic | 50.0% | |
| AAGTCCGCCATTGACAAAGC+TGG | + | chr7_1:79493418-79493437 | Msa1041830:CDS | 50.0% | |
| ! | GGATTTGAGACTTCTGAGCG+GGG | - | chr7_1:79493668-79493687 | None:intergenic | 50.0% |
| ! | TCAGCACAGGAGGCATAATG+AGG | - | chr7_1:79493789-79493808 | None:intergenic | 50.0% |
| GACGGCTCACAGAAGATATC+TGG | + | chr7_1:79494186-79494205 | Msa1041830:CDS | 50.0% | |
| TCCCAGTCATCCTGGTCAAA+AGG | - | chr7_1:79494276-79494295 | None:intergenic | 50.0% | |
| GCTAAGATGACCGGTGAGAT+TGG | + | chr7_1:79494303-79494322 | Msa1041830:CDS | 50.0% | |
| TCTCTTGGTTACCAACCCCA+AGG | + | chr7_1:79494353-79494372 | Msa1041830:CDS | 50.0% | |
| GTGTCCACAGAGAGTTCAGA+AGG | + | chr7_1:79494455-79494474 | Msa1041830:intron | 50.0% | |
| !! | CTGAGAGTATTGAAGCCGTC+AGG | + | chr7_1:79494639-79494658 | Msa1041830:CDS | 50.0% |
| AGCCGTCAGGATGTCCAAAA+AGG | + | chr7_1:79494652-79494671 | Msa1041830:CDS | 50.0% | |
| GTCAGGATGTCCAAAAAGGC+TGG | + | chr7_1:79494656-79494675 | Msa1041830:CDS | 50.0% | |
| GGATGTCCAAAAAGGCTGGA+TGG | + | chr7_1:79494660-79494679 | Msa1041830:CDS | 50.0% | |
| TGTTTGCAGTGGAGAGACTG+AGG | + | chr7_1:79494814-79494833 | Msa1041830:intron | 50.0% | |
| CTTCTAGTATGGCTCGACAG+GGG | - | chr7_1:79495188-79495207 | None:intergenic | 50.0% | |
| GCTTCTAGTATGGCTCGACA+GGG | - | chr7_1:79495189-79495208 | None:intergenic | 50.0% | |
| AGCTTCTAGTATGGCTCGAC+AGG | - | chr7_1:79495190-79495209 | None:intergenic | 50.0% | |
| GCAACCGGTGGAGTAAAGTT+TGG | - | chr7_1:79495567-79495586 | None:intergenic | 50.0% | |
| ! | ACTTTACTCCACCGGTTGCT+TGG | + | chr7_1:79495568-79495587 | Msa1041830:three_prime_UTR | 50.0% |
| ! | CTTTACTCCACCGGTTGCTT+GGG | + | chr7_1:79495569-79495588 | Msa1041830:three_prime_UTR | 50.0% |
| CAATAAAACCTGAGGCTCGG+TGG | - | chr7_1:79495658-79495677 | None:intergenic | 50.0% | |
| GGGTCTCAGACACCTGCTTA+TGG | - | chr7_1:79490520-79490539 | None:intergenic | 55.0% | |
| TGAAGACGAACCTCGACGGT+AGG | - | chr7_1:79490678-79490697 | None:intergenic | 55.0% | |
| GCTAGAGCTGCTGTTCCTAG+TGG | + | chr7_1:79490837-79490856 | Msa1041830:CDS | 55.0% | |
| GTTCCTAGTGGTGCATCCAC+TGG | + | chr7_1:79490849-79490868 | Msa1041830:CDS | 55.0% | |
| !! | TGCACCAGCATTGATCGGCA+AGG | + | chr7_1:79491932-79491951 | Msa1041830:CDS | 55.0% |
| !! | GGGTGTCGACTATGTTGCTG+CGG | - | chr7_1:79492655-79492674 | None:intergenic | 55.0% |
| GGAAGCCATGAAGATGGGTG+TGG | + | chr7_1:79492986-79493005 | Msa1041830:CDS | 55.0% | |
| ATGTGGATAGACACCAGGGC+TGG | - | chr7_1:79493206-79493225 | None:intergenic | 55.0% | |
| ! | TGGCTTTGCCCCCAACATTC+AGG | + | chr7_1:79493369-79493388 | Msa1041830:CDS | 55.0% |
| TCTGAGCGGGGAGATTGGTA+TGG | - | chr7_1:79493656-79493675 | None:intergenic | 55.0% | |
| AGACTTCTGAGCGGGGAGAT+TGG | - | chr7_1:79493661-79493680 | None:intergenic | 55.0% | |
| TCTGTGAGCCGTCGTTGTTC+TGG | - | chr7_1:79494179-79494198 | None:intergenic | 55.0% | |
| CATAGTGCTCCCAGTCATCC+TGG | - | chr7_1:79494284-79494303 | None:intergenic | 55.0% | |
| ! | GACACCCCATCCAGCCTTTT+TGG | - | chr7_1:79494669-79494688 | None:intergenic | 55.0% |
| GTGTCATGACCAGCCACAGA+AGG | + | chr7_1:79494684-79494703 | Msa1041830:CDS | 55.0% | |
| ! | TTAAGACCGGAGCACCTTGC+AGG | + | chr7_1:79494978-79494997 | Msa1041830:CDS | 55.0% |
| GCGTCTTGCCAAGTACAACC+AGG | + | chr7_1:79495006-79495025 | Msa1041830:CDS | 55.0% | |
| ! | GGTGCTGAAGCAGTGTATGC+TGG | + | chr7_1:79495148-79495167 | Msa1041830:CDS | 55.0% |
| AGTATGGCTCGACAGGGGTA+CGG | - | chr7_1:79495183-79495202 | None:intergenic | 55.0% | |
| ! | GATCTGACGGGCCTTGATGG+AGG | - | chr7_1:79490637-79490656 | None:intergenic | 60.0% |
| TCGTGGCAATCCTACCGTCG+AGG | + | chr7_1:79490665-79490684 | Msa1041830:CDS | 60.0% | |
| TCACGTTGGCAACAGCCTGC+AGG | - | chr7_1:79491902-79491921 | None:intergenic | 60.0% | |
| AGTCTCCTTTGTGCCAGCCC+TGG | + | chr7_1:79493190-79493209 | Msa1041830:intron | 60.0% | |
| ! | AGACACCAGGGCTGGCACAA+AGG | - | chr7_1:79493198-79493217 | None:intergenic | 60.0% |
| ! | CTCTGACCTGCAAGGTGCTC+CGG | - | chr7_1:79494987-79495006 | None:intergenic | 60.0% |
| GCAAGACGCTCTGACCTGCA+AGG | - | chr7_1:79494995-79495014 | None:intergenic | 60.0% | |
| GGGGCTGACAAGTTATCCCC+TGG | + | chr7_1:79495367-79495386 | Msa1041830:three_prime_UTR | 60.0% | |
| ! | ACTCCACCGGTTGCTTGGGT+TGG | + | chr7_1:79495573-79495592 | Msa1041830:three_prime_UTR | 60.0% |
| TAGCCAACCCAAGCAACCGG+TGG | - | chr7_1:79495579-79495598 | None:intergenic | 60.0% | |
| ACCATCTACCACCGAGCCTC+AGG | + | chr7_1:79495647-79495666 | Msa1041830:three_prime_UTR | 60.0% | |
| !! | ACCTGAGGCTCGGTGGTAGA+TGG | - | chr7_1:79495651-79495670 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 79490482 | 79495920 | 79490482 | ID=Msa1041830;Name=Msa1041830 |
| chr7_1 | mRNA | 79490482 | 79495920 | 79490482 | ID=Msa1041830-mRNA-1;Parent=Msa1041830;Name=Msa1041830-mRNA-1;_AED=0.14;_eAED=0.14;_QI=139|1|1|1|1|1|16|716|444 |
| chr7_1 | exon | 79490482 | 79490686 | 79490482 | ID=Msa1041830-mRNA-1:exon:21493;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79490807 | 79490870 | 79490807 | ID=Msa1041830-mRNA-1:exon:21494;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79491272 | 79491336 | 79491272 | ID=Msa1041830-mRNA-1:exon:21495;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79491906 | 79491953 | 79491906 | ID=Msa1041830-mRNA-1:exon:21496;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79492135 | 79492221 | 79492135 | ID=Msa1041830-mRNA-1:exon:21497;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79492318 | 79492398 | 79492318 | ID=Msa1041830-mRNA-1:exon:21498;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79492761 | 79492862 | 79492761 | ID=Msa1041830-mRNA-1:exon:21499;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79492948 | 79493028 | 79492948 | ID=Msa1041830-mRNA-1:exon:21500;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79493316 | 79493453 | 79493316 | ID=Msa1041830-mRNA-1:exon:21501;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79493543 | 79493620 | 79493543 | ID=Msa1041830-mRNA-1:exon:21502;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79494180 | 79494374 | 79494180 | ID=Msa1041830-mRNA-1:exon:21503;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79494465 | 79494515 | 79494465 | ID=Msa1041830-mRNA-1:exon:21504;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79494617 | 79494705 | 79494617 | ID=Msa1041830-mRNA-1:exon:21505;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79494823 | 79494874 | 79494823 | ID=Msa1041830-mRNA-1:exon:21506;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79494971 | 79495027 | 79494971 | ID=Msa1041830-mRNA-1:exon:21507;Parent=Msa1041830-mRNA-1 |
| chr7_1 | exon | 79495124 | 79495920 | 79495124 | ID=Msa1041830-mRNA-1:exon:21508;Parent=Msa1041830-mRNA-1 |
| chr7_1 | five_prime_UTR | 79490482 | 79490620 | 79490482 | ID=Msa1041830-mRNA-1:five_prime_utr;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79490621 | 79490686 | 79490621 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79490807 | 79490870 | 79490807 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79491272 | 79491336 | 79491272 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79491906 | 79491953 | 79491906 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79492135 | 79492221 | 79492135 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79492318 | 79492398 | 79492318 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79492761 | 79492862 | 79492761 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79492948 | 79493028 | 79492948 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79493316 | 79493453 | 79493316 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79493543 | 79493620 | 79493543 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79494180 | 79494374 | 79494180 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79494465 | 79494515 | 79494465 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79494617 | 79494705 | 79494617 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79494823 | 79494874 | 79494823 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79494971 | 79495027 | 79494971 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | CDS | 79495124 | 79495204 | 79495124 | ID=Msa1041830-mRNA-1:cds;Parent=Msa1041830-mRNA-1 |
| chr7_1 | three_prime_UTR | 79495205 | 79495920 | 79495205 | ID=Msa1041830-mRNA-1:three_prime_utr;Parent=Msa1041830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
