Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124980 | XP_013450091.1 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124980 | sp|P42896|ENO_RICCO | 90.023 | 441 | 44 | 0 | 4 | 444 | 5 | 445 | 0.0 | 831 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124980 | A0A072U338 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1124980 | 0.801784 | 7.646200e-49 | -8.615850e-47 |
| Msa0003330 | Msa1124980 | 0.833773 | 4.398436e-56 | -8.615850e-47 |
| Msa0016440 | Msa1124980 | 0.814744 | 1.318176e-51 | -8.615850e-47 |
| Msa0020870 | Msa1124980 | 0.805560 | 1.258508e-49 | -8.615850e-47 |
| Msa0025690 | Msa1124980 | -0.807728 | 4.387562e-50 | -8.615850e-47 |
| Msa0029730 | Msa1124980 | 0.802710 | 4.930732e-49 | -8.615850e-47 |
| Msa0042510 | Msa1124980 | 0.840298 | 9.457712e-58 | -8.615850e-47 |
| Msa0050320 | Msa1124980 | -0.802988 | 4.320675e-49 | -8.615850e-47 |
| Msa0071640 | Msa1124980 | 0.814551 | 1.454254e-51 | -8.615850e-47 |
| Msa0079560 | Msa1124980 | 0.821020 | 5.041169e-53 | -8.615850e-47 |
| Msa0094210 | Msa1124980 | 0.822041 | 2.928092e-53 | -8.615850e-47 |
| Msa0113920 | Msa1124980 | 0.807896 | 4.039681e-50 | -8.615850e-47 |
| Msa0116600 | Msa1124980 | 0.816597 | 5.095668e-52 | -8.615850e-47 |
| Msa0116690 | Msa1124980 | 0.804102 | 2.537257e-49 | -8.615850e-47 |
| Msa0602900 | Msa1124980 | 0.808879 | 2.493488e-50 | -8.615850e-47 |
| Msa0604890 | Msa1124980 | -0.804792 | 1.822101e-49 | -8.615850e-47 |
| Msa0619230 | Msa1124980 | 0.842696 | 2.208165e-58 | -8.615850e-47 |
| Msa0621190 | Msa1124980 | 0.868295 | 7.261924e-66 | -8.615850e-47 |
| Msa0643960 | Msa1124980 | 0.807482 | 4.947294e-50 | -8.615850e-47 |
| Msa0646180 | Msa1124980 | -0.808535 | 2.952766e-50 | -8.615850e-47 |
| Msa0655970 | Msa1124980 | 0.829939 | 3.886983e-55 | -8.615850e-47 |
| Msa0656320 | Msa1124980 | 0.814626 | 1.400026e-51 | -8.615850e-47 |
| Msa0656450 | Msa1124980 | 0.814832 | 1.260190e-51 | -8.615850e-47 |
| Msa0691760 | Msa1124980 | 0.810270 | 1.252772e-50 | -8.615850e-47 |
| Msa0700370 | Msa1124980 | 0.820176 | 7.876348e-53 | -8.615850e-47 |
| Msa0709380 | Msa1124980 | 0.960429 | 1.511342e-118 | -8.615850e-47 |
| Msa0724530 | Msa1124980 | 0.802658 | 5.053200e-49 | -8.615850e-47 |
| Msa0758420 | Msa1124980 | 0.815493 | 8.986123e-52 | -8.615850e-47 |
| Msa0790450 | Msa1124980 | 0.860112 | 2.591545e-63 | -8.615850e-47 |
| Msa0812330 | Msa1124980 | 0.802687 | 4.984133e-49 | -8.615850e-47 |
| Msa0127230 | Msa1124980 | 0.814553 | 1.453321e-51 | -8.615850e-47 |
| Msa0132890 | Msa1124980 | 0.816118 | 6.520456e-52 | -8.615850e-47 |
| Msa0154720 | Msa1124980 | -0.800310 | 1.530659e-48 | -8.615850e-47 |
| Msa0168320 | Msa1124980 | 0.802530 | 5.371067e-49 | -8.615850e-47 |
| Msa0188740 | Msa1124980 | 0.873459 | 1.447105e-67 | -8.615850e-47 |
| Msa0192050 | Msa1124980 | 0.804171 | 2.455470e-49 | -8.615850e-47 |
| Msa0192300 | Msa1124980 | 0.849002 | 4.274556e-60 | -8.615850e-47 |
| Msa0195030 | Msa1124980 | 0.856296 | 3.541175e-62 | -8.615850e-47 |
| Msa0216640 | Msa1124980 | 0.821560 | 3.783631e-53 | -8.615850e-47 |
| Msa0233550 | Msa1124980 | 0.816151 | 6.411529e-52 | -8.615850e-47 |
| Msa0237180 | Msa1124980 | 0.838376 | 2.982824e-57 | -8.615850e-47 |
| Msa0371490 | Msa1124980 | 0.822384 | 2.438441e-53 | -8.615850e-47 |
| Msa0373550 | Msa1124980 | 0.833861 | 4.180742e-56 | -8.615850e-47 |
| Msa0380590 | Msa1124980 | 0.810550 | 1.090226e-50 | -8.615850e-47 |
| Msa0382670 | Msa1124980 | 0.875999 | 1.978295e-68 | -8.615850e-47 |
| Msa0385030 | Msa1124980 | 0.803385 | 3.575153e-49 | -8.615850e-47 |
| Msa0387290 | Msa1124980 | 0.857906 | 1.186373e-62 | -8.615850e-47 |
| Msa0388520 | Msa1124980 | 0.807122 | 5.898079e-50 | -8.615850e-47 |
| Msa0389800 | Msa1124980 | 0.827318 | 1.671235e-54 | -8.615850e-47 |
| Msa0416470 | Msa1124980 | 0.855965 | 4.427561e-62 | -8.615850e-47 |
| Msa0426090 | Msa1124980 | 0.803094 | 4.107226e-49 | -8.615850e-47 |
| Msa0432260 | Msa1124980 | -0.808099 | 3.657590e-50 | -8.615850e-47 |
| Msa0436830 | Msa1124980 | -0.834781 | 2.458008e-56 | -8.615850e-47 |
| Msa0468140 | Msa1124980 | 0.831461 | 1.647886e-55 | -8.615850e-47 |
| Msa0468660 | Msa1124980 | 0.828687 | 7.825521e-55 | -8.615850e-47 |
| Msa0472480 | Msa1124980 | 0.809584 | 1.760428e-50 | -8.615850e-47 |
| Msa0477670 | Msa1124980 | 0.801346 | 9.403862e-49 | -8.615850e-47 |
| Msa0480940 | Msa1124980 | 0.806296 | 8.814801e-50 | -8.615850e-47 |
| Msa0982260 | Msa1124980 | 0.827665 | 1.380213e-54 | -8.615850e-47 |
| Msa1037030 | Msa1124980 | 0.835058 | 2.093091e-56 | -8.615850e-47 |
| Msa1041830 | Msa1124980 | 0.979495 | 4.297292e-148 | -8.615850e-47 |
| Msa1046140 | Msa1124980 | 0.812273 | 4.606489e-51 | -8.615850e-47 |
| Msa1076200 | Msa1124980 | 0.816841 | 4.491741e-52 | -8.615850e-47 |
| Msa1082050 | Msa1124980 | 0.804001 | 2.663808e-49 | -8.615850e-47 |
| Msa0239420 | Msa1124980 | 0.833898 | 4.093707e-56 | -8.615850e-47 |
| Msa0243750 | Msa1124980 | 0.805876 | 1.080120e-49 | -8.615850e-47 |
| Msa0266380 | Msa1124980 | -0.810875 | 9.274036e-51 | -8.615850e-47 |
| Msa0270160 | Msa1124980 | 0.838801 | 2.317546e-57 | -8.615850e-47 |
| Msa0274940 | Msa1124980 | 0.858531 | 7.725841e-63 | -8.615850e-47 |
| Msa0282290 | Msa1124980 | 0.805549 | 1.265418e-49 | -8.615850e-47 |
| Msa0301250 | Msa1124980 | 0.849023 | 4.219799e-60 | -8.615850e-47 |
| Msa0313060 | Msa1124980 | 0.829049 | 6.397658e-55 | -8.615850e-47 |
| Msa0315660 | Msa1124980 | 0.848368 | 6.409885e-60 | -8.615850e-47 |
| Msa0317300 | Msa1124980 | 0.810647 | 1.038865e-50 | -8.615850e-47 |
| Msa0341860 | Msa1124980 | -0.812456 | 4.200265e-51 | -8.615850e-47 |
| Msa1124980 | Msa1125530 | -0.803572 | 3.270631e-49 | -8.615850e-47 |
| Msa1124980 | Msa1126690 | 0.808005 | 3.830922e-50 | -8.615850e-47 |
| Msa1124980 | Msa1144630 | 0.802346 | 5.860701e-49 | -8.615850e-47 |
| Msa1124980 | Msa1152860 | 0.844286 | 8.306803e-59 | -8.615850e-47 |
| Msa1124980 | Msa1156830 | 0.800481 | 1.412685e-48 | -8.615850e-47 |
| Msa1124980 | Msa1163320 | 0.811841 | 5.721922e-51 | -8.615850e-47 |
| Msa1124980 | Msa1167360 | 0.994952 | 1.153610e-211 | -8.615850e-47 |
| Msa1124980 | Msa1207880 | 0.802382 | 5.760058e-49 | -8.615850e-47 |
| Msa1124980 | Msa1218610 | 0.802444 | 5.593871e-49 | -8.615850e-47 |
| Msa1124980 | Msa1225040 | 0.815825 | 7.581910e-52 | -8.615850e-47 |
| Msa1124980 | Msa1235950 | 0.807822 | 4.189360e-50 | -8.615850e-47 |
| Msa1124980 | Msa1235980 | 0.815045 | 1.130379e-51 | -8.615850e-47 |
| Msa1124980 | Msa1237040 | 0.855911 | 4.589238e-62 | -8.615850e-47 |
| Msa1124980 | Msa1261970 | 0.802500 | 5.448685e-49 | -8.615850e-47 |
| Msa1124980 | Msa1284800 | 0.800599 | 1.336331e-48 | -8.615850e-47 |
| Msa1124980 | Msa1307730 | 0.829077 | 6.299496e-55 | -8.615850e-47 |
| Msa1124980 | Msa1316100 | 0.810267 | 1.255125e-50 | -8.615850e-47 |
| Msa1124980 | Msa1317390 | 0.864096 | 1.554826e-64 | -8.615850e-47 |
| Msa1124980 | Msa1359880 | -0.807249 | 5.542324e-50 | -8.615850e-47 |
| Msa1124980 | Msa1363910 | 0.803544 | 3.314607e-49 | -8.615850e-47 |
| Msa1124980 | Msa1363930 | 0.803954 | 2.723895e-49 | -8.615850e-47 |
| Msa1124980 | Msa1387750 | 0.850317 | 1.835762e-60 | -8.615850e-47 |
| Msa1124980 | Msa1390760 | 0.844937 | 5.547719e-59 | -8.615850e-47 |
| Msa1124980 | Msa1403520 | 0.825555 | 4.397389e-54 | -8.615850e-47 |
| Msa1124980 | Msa1407550 | 0.803733 | 3.028555e-49 | -8.615850e-47 |
| Msa1124980 | Msa1413570 | 0.813632 | 2.320229e-51 | -8.615850e-47 |
| Msa1124980 | Msa1423050 | 0.994155 | 5.382471e-205 | -8.615850e-47 |
| Msa1124980 | Msa1450560 | 0.864732 | 9.840368e-65 | -8.615850e-47 |
| Msa1124980 | Msa1463510 | 0.858748 | 6.656893e-63 | -8.615850e-47 |
| Msa1124980 | Msa1465700 | 0.835948 | 1.246267e-56 | -8.615850e-47 |
| Msa1124980 | Msa1465890 | 0.846443 | 2.164840e-59 | -8.615850e-47 |
| Msa0482760 | Msa1124980 | 0.819487 | 1.131852e-52 | -8.615850e-47 |
| Msa0500420 | Msa1124980 | 0.815809 | 7.640976e-52 | -8.615850e-47 |
| Msa0511760 | Msa1124980 | 0.823158 | 1.609870e-53 | -8.615850e-47 |
| Msa0540160 | Msa1124980 | -0.805012 | 1.639136e-49 | -8.615850e-47 |
| Msa0547920 | Msa1124980 | 0.805793 | 1.124448e-49 | -8.615850e-47 |
| Msa0573550 | Msa1124980 | 0.820080 | 8.284061e-53 | -8.615850e-47 |
| Msa0597240 | Msa1124980 | 0.818321 | 2.083682e-52 | -8.615850e-47 |
| Msa0852620 | Msa1124980 | 0.806758 | 7.041919e-50 | -8.615850e-47 |
| Msa0880050 | Msa1124980 | 0.994950 | 1.215491e-211 | -8.615850e-47 |
| Msa0881240 | Msa1124980 | 0.812170 | 4.851830e-51 | -8.615850e-47 |
| Msa0929700 | Msa1124980 | 0.817347 | 3.456427e-52 | -8.615850e-47 |
| Msa0929790 | Msa1124980 | 0.810525 | 1.103972e-50 | -8.615850e-47 |
| Msa0930360 | Msa1124980 | 0.863487 | 2.403024e-64 | -8.615850e-47 |
| Msa0930790 | Msa1124980 | 0.853728 | 1.972479e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124980 | MtrunA17_Chr7g0265741 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Msa1124980 | MtrunA17_Chr6g0476311 | 87.640 | 445 | 54 | 1 | 1 | 444 | 2 | 446 | 0.0 | 816 |
| Msa1124980 | MtrunA17_Chr2g0307671 | 68.182 | 440 | 128 | 7 | 2 | 440 | 63 | 491 | 0.0 | 602 |
| Msa1124980 | MtrunA17_Chr5g0447301 | 60.268 | 224 | 81 | 4 | 2 | 224 | 45 | 261 | 1.07e-84 | 261 |
| Msa1124980 | MtrunA17_Chr5g0447311 | 59.155 | 213 | 84 | 3 | 226 | 438 | 19 | 228 | 8.35e-84 | 256 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124980 | AT2G36530.1 | 89.189 | 444 | 48 | 0 | 1 | 444 | 1 | 444 | 0.0 | 821 |
| Msa1124980 | AT2G36530.2 | 89.336 | 422 | 45 | 0 | 23 | 444 | 12 | 433 | 0.0 | 780 |
| Msa1124980 | AT1G74030.1 | 67.352 | 438 | 131 | 6 | 4 | 440 | 51 | 477 | 0.0 | 599 |
| Msa1124980 | AT2G29560.1 | 57.763 | 438 | 174 | 7 | 2 | 438 | 45 | 472 | 1.83e-175 | 500 |
Find 165 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCATATGCAGGAGTTTA+TGG | 0.174723 | 7_3:-76248144 | Msa1124980:intron |
| TAATTAGACGTCATAAAATT+TGG | 0.221935 | 7_3:-76245484 | Msa1124980:three_prime_UTR |
| AAACAACAGGTCAACCAAAT+TGG | 0.247163 | 7_3:-76246481 | Msa1124980:intron |
| GTTACTACTCAACTGAAAAT+TGG | 0.253970 | 7_3:+76245633 | None:intergenic |
| TCTCAGTCACGGATCCAATT+TGG | 0.266564 | 7_3:+76246467 | None:intergenic |
| AAATATGTGGTTGGGTGTTT+AGG | 0.286685 | 7_3:-76245265 | Msa1124980:three_prime_UTR |
| ATAAAATTTGGTCATGCATT+AGG | 0.291097 | 7_3:-76245472 | Msa1124980:three_prime_UTR |
| CCCGCTTTCAATGTGATTAA+TGG | 0.296494 | 7_3:-76248271 | Msa1124980:CDS |
| TGCAAGAGACACTGCTAATA+TGG | 0.297215 | 7_3:+76248746 | None:intergenic |
| GGGTCTCAGACACCTGCTTA+TGG | 0.300267 | 7_3:+76250554 | None:intergenic |
| CACTTTCAAAGCTTCTAGTA+TGG | 0.308227 | 7_3:+76245893 | None:intergenic |
| TCAATTTCTGTCTGCTGAGT+TGG | 0.308960 | 7_3:+76248939 | None:intergenic |
| CCTTGTATAGAGGAATCTTT+AGG | 0.321207 | 7_3:+76248700 | None:intergenic |
| GGATCCTCAATTGAAACAAT+TGG | 0.323273 | 7_3:+76246837 | None:intergenic |
| GACTTCCACACCCATCTTCA+TGG | 0.331030 | 7_3:+76248088 | None:intergenic |
| TTAGTTTGAGCAATGAGATT+TGG | 0.336977 | 7_3:-76245850 | Msa1124980:three_prime_UTR |
| TACGATAAACAAATTAGATT+TGG | 0.337185 | 7_3:-76245220 | Msa1124980:three_prime_UTR |
| ACTTTACTCCACCGGTTGCT+TGG | 0.345294 | 7_3:-76245521 | Msa1124980:three_prime_UTR |
| TAATGTTCTTAGGTTGTCAT+TGG | 0.357703 | 7_3:-76247539 | Msa1124980:intron |
| CTTTACTCCACCGGTTGCTT+GGG | 0.361693 | 7_3:-76245520 | Msa1124980:three_prime_UTR |
| TCAGGAAAACAAGGAAGGTT+TGG | 0.362760 | 7_3:-76247692 | Msa1124980:CDS |
| GTCAGCCCCATAAAATAAAA+AGG | 0.371324 | 7_3:+76245736 | None:intergenic |
| CAATTTCTGTCTGCTGAGTT+GGG | 0.375682 | 7_3:+76248940 | None:intergenic |
| CAAAACCAAGTTCTTGTTAC+CGG | 0.376652 | 7_3:+76248300 | None:intergenic |
| AAAGATCTGACGGGCCTTGA+TGG | 0.379603 | 7_3:+76250434 | None:intergenic |
| AGCTTCTAGTATGGCTCGAC+AGG | 0.381624 | 7_3:+76245902 | None:intergenic |
| TTAAGACCGGAGCACCTTGC+AGG | 0.385327 | 7_3:-76246111 | Msa1124980:CDS |
| TGTTGGAGCCTCCTCTTTCA+AGG | 0.388440 | 7_3:-76248114 | Msa1124980:CDS |
| GACAGAAATTGACAACTTCA+TGG | 0.389489 | 7_3:-76248928 | Msa1124980:CDS |
| TCAAACTAAGGTTGGTTATC+CGG | 0.395194 | 7_3:+76245864 | None:intergenic |
| GACGGCTCACAGAAGATATC+TGG | 0.395388 | 7_3:-76246903 | Msa1124980:CDS |
| ACCTGAGGCTCGGTGGTAGA+TGG | 0.398239 | 7_3:+76245441 | None:intergenic |
| ATCATACGATTTGAACTTCA+AGG | 0.407971 | 7_3:-76247477 | Msa1124980:CDS |
| GCTAAGATGACCGGTGAGAT+TGG | 0.409902 | 7_3:-76246786 | Msa1124980:CDS |
| AGCCGTCAGGATGTCCAAAA+AGG | 0.410162 | 7_3:-76246437 | Msa1124980:CDS |
| GGTCTCAGACACCTGCTTAT+GGG | 0.420775 | 7_3:+76250555 | None:intergenic |
| CAGCATATTGCAAACATTGC+CGG | 0.421071 | 7_3:-76248319 | Msa1124980:CDS |
| TTCATTGCTGATCTTGCTGT+TGG | 0.424087 | 7_3:-76246247 | Msa1124980:CDS |
| TGACGGAACTGTTAATGAAT+GGG | 0.427486 | 7_3:-76248895 | Msa1124980:CDS |
| GCAACCGGTGGAGTAAAGTT+TGG | 0.427490 | 7_3:+76245525 | None:intergenic |
| CTCTGACCTGCAAGGTGCTC+CGG | 0.431664 | 7_3:+76246105 | None:intergenic |
| CATTGCCGGTAACAAGAACT+TGG | 0.438486 | 7_3:-76248305 | Msa1124980:CDS |
| GGTGCTGAAGCAGTGTATGC+TGG | 0.440630 | 7_3:-76245941 | Msa1124980:CDS |
| GTACCCAATTGTTTCAATTG+AGG | 0.440774 | 7_3:-76246841 | Msa1124980:CDS |
| AAATCTCATTGCTCAAACTA+AGG | 0.442849 | 7_3:+76245852 | None:intergenic |
| CTCATTGCTCAAACTAAGGT+TGG | 0.443078 | 7_3:+76245856 | None:intergenic |
| AACACTAACCTGGTTGTACT+TGG | 0.444307 | 7_3:+76246075 | None:intergenic |
| ATCACATTGAAAGCGGGAAC+AGG | 0.450874 | 7_3:+76248277 | None:intergenic |
| TCTCTTGCAGTGTGCAAAGC+TGG | 0.451916 | 7_3:-76248732 | Msa1124980:CDS |
| ACCATCTACCACCGAGCCTC+AGG | 0.453494 | 7_3:-76245442 | Msa1124980:three_prime_UTR |
| GATCCTCAATTGAAACAATT+GGG | 0.460561 | 7_3:+76246838 | None:intergenic |
| ACTCCACCGGTTGCTTGGGT+TGG | 0.461300 | 7_3:-76245516 | Msa1124980:three_prime_UTR |
| GAGTTTATGGTTCTTCCTGT+TGG | 0.470295 | 7_3:-76248131 | Msa1124980:CDS |
| TTGAAAGAGGAGGCTCCAAC+AGG | 0.471503 | 7_3:+76248116 | None:intergenic |
| CTTCATGGCTTCCTTGAAAG+AGG | 0.475418 | 7_3:+76248103 | None:intergenic |
| TCACATCGATTTCTTCTCCA+TGG | 0.477736 | 7_3:-76250469 | Msa1124980:exon |
| TCCCAGTCATCCTGGTCAAA+AGG | 0.478242 | 7_3:+76246816 | None:intergenic |
| GATGGAGGATCTGACTATCT+TGG | 0.478515 | 7_3:-76249776 | Msa1124980:CDS |
| AGGAAACAAACTTGCAATGC+AGG | 0.487451 | 7_3:-76248236 | Msa1124980:intron |
| TTGACGGAACTGTTAATGAA+TGG | 0.488553 | 7_3:-76248896 | Msa1124980:CDS |
| GTTCCTAGTGGTGCATCCAC+TGG | 0.489788 | 7_3:-76250225 | Msa1124980:intron |
| TTCATGGTTCAGAAGCTTGA+CGG | 0.490896 | 7_3:-76248912 | Msa1124980:CDS |
| CATAGTGCTCCCAGTCATCC+TGG | 0.492578 | 7_3:+76246808 | None:intergenic |
| ACCGTATAAAATATGTGGTT+GGG | 0.493409 | 7_3:-76245273 | Msa1124980:three_prime_UTR |
| GGAACCAATGTACAAATTGT+TGG | 0.493520 | 7_3:-76246765 | Msa1124980:CDS |
| CACCGTATAAAATATGTGGT+TGG | 0.494907 | 7_3:-76245274 | Msa1124980:three_prime_UTR |
| AATTGTTGGTGATGATCTCT+TGG | 0.498883 | 7_3:-76246751 | Msa1124980:CDS |
| GCTGTGATTAAGAAGAAATA+TGG | 0.499581 | 7_3:-76247763 | Msa1124980:CDS |
| ATCACCAACAATTTGTACAT+TGG | 0.504433 | 7_3:+76246761 | None:intergenic |
| AACAGCAAGATCAGCAATGA+AGG | 0.504723 | 7_3:+76246249 | None:intergenic |
| ATATAGCCAACCCAAGCAAC+CGG | 0.504740 | 7_3:+76245510 | None:intergenic |
| GGGGCTGACAAGTTATCCCC+TGG | 0.506892 | 7_3:-76245722 | Msa1124980:three_prime_UTR |
| CTGAGAGTATTGAAGCCGTC+AGG | 0.511646 | 7_3:-76246450 | Msa1124980:CDS |
| AAGTTCAAACCTTCTGTGGC+TGG | 0.511692 | 7_3:+76246396 | None:intergenic |
| CATACCTTGCCGATCAATGC+TGG | 0.514212 | 7_3:+76249141 | None:intergenic |
| TTGAGAATTGAGGAGGAGCT+TGG | 0.514397 | 7_3:-76245962 | Msa1124980:CDS |
| GCAGTAAATGTTGGTGATGA+AGG | 0.515363 | 7_3:-76247733 | Msa1124980:CDS |
| TTCTTAGGTTGTCATTGGAA+TGG | 0.517609 | 7_3:-76247534 | Msa1124980:intron |
| GATCAATGCTGGTGCAATGA+TGG | 0.520209 | 7_3:+76249152 | None:intergenic |
| ACTATAAATAACCCATAAGC+AGG | 0.523830 | 7_3:-76250566 | Msa1124980:five_prime_UTR |
| TTTCAAGGAAGCCATGAAGA+TGG | 0.524759 | 7_3:-76248099 | Msa1124980:CDS |
| TACATTGGTTCCAATCTCAC+CGG | 0.526389 | 7_3:+76246776 | None:intergenic |
| TTGGCAGCTATTGAGAATTG+AGG | 0.528228 | 7_3:-76245972 | Msa1124980:intron |
| AAAAGAAGCGAGAGTTGATA+GGG | 0.529115 | 7_3:-76250589 | Msa1124980:five_prime_UTR |
| GGATAAATTACCTTGTATAG+AGG | 0.532813 | 7_3:+76248690 | None:intergenic |
| CCTAAAGATTCCTCTATACA+AGG | 0.534980 | 7_3:-76248700 | Msa1124980:intron |
| AGCGAAAGTACCATCGGATA+CGG | 0.536390 | 7_3:+76250257 | None:intergenic |
| AAGTCCGCCATTGACAAAGC+TGG | 0.537931 | 7_3:-76247661 | Msa1124980:CDS |
| TGCAGCTTCTGAGTTCTACA+AGG | 0.538609 | 7_3:-76247507 | Msa1124980:CDS |
| ATTGGAACGACATTGAAAGT+AGG | 0.539332 | 7_3:+76245651 | None:intergenic |
| CAACTTAAGCAATCGTGAAG+AGG | 0.545215 | 7_3:+76245374 | None:intergenic |
| GGTGTAACCAGCTTTGTCAA+TGG | 0.547964 | 7_3:+76247654 | None:intergenic |
| GCAACCAAACTTTACTCCAC+CGG | 0.548449 | 7_3:-76245529 | Msa1124980:three_prime_UTR |
| TTCAAGGAAGCCATGAAGAT+GGG | 0.550371 | 7_3:-76248098 | Msa1124980:CDS |
| ATCATTGCACCAGCATTGAT+CGG | 0.553718 | 7_3:-76249150 | Msa1124980:CDS |
| CCCCAACATTCAGGAAAACA+AGG | 0.562910 | 7_3:-76247701 | Msa1124980:CDS |
| GAGGCTCTTGAGTTAAGAGA+TGG | 0.564582 | 7_3:-76249794 | Msa1124980:CDS |
| GGCTGCTATTACCTCCATCA+AGG | 0.566953 | 7_3:-76250448 | Msa1124980:CDS |
| GCTTTCAATGTGATTAATGG+TGG | 0.568679 | 7_3:-76248268 | Msa1124980:CDS |
| CATACTAGAAGCTTTGAAAG+TGG | 0.569484 | 7_3:-76245892 | Msa1124980:exon |
| GGAAGCCATGAAGATGGGTG+TGG | 0.573653 | 7_3:-76248093 | Msa1124980:CDS |
| TCTTGGCAAGGGTGTATCAA+AGG | 0.577692 | 7_3:-76249759 | Msa1124980:intron |
| CAGACACCGTATAAAATATG+TGG | 0.578912 | 7_3:-76245278 | Msa1124980:three_prime_UTR |
| AGTATGGCTCGACAGGGGTA+CGG | 0.579765 | 7_3:+76245909 | None:intergenic |
| GTGTCCACAGAGAGTTCAGA+AGG | 0.580306 | 7_3:-76246634 | Msa1124980:intron |
| TCTTGCTGTTGGTTTGTCAA+CGG | 0.581023 | 7_3:-76246236 | Msa1124980:intron |
| TAATATACAGACCTTGGGGT+TGG | 0.582575 | 7_3:+76246725 | None:intergenic |
| AGACACTGCTAATATGGCAT+TGG | 0.587574 | 7_3:+76248752 | None:intergenic |
| GATGGAGGTAATAGCAGCCA+TGG | 0.587616 | 7_3:+76250452 | None:intergenic |
| AACATTCAGGAAAACAAGGA+AGG | 0.590478 | 7_3:-76247697 | Msa1124980:CDS |
| CTGAAAAGAGAACTGTATTG+TGG | 0.590789 | 7_3:-76245317 | Msa1124980:three_prime_UTR |
| CATGGCTTCCTTGAAAGAGG+AGG | 0.591923 | 7_3:+76248106 | None:intergenic |
| CCATTAATCACATTGAAAGC+GGG | 0.594481 | 7_3:+76248271 | None:intergenic |
| ATTAATGGTGGATCACATGC+AGG | 0.595757 | 7_3:-76248256 | Msa1124980:CDS |
| GAACAGGGTCAAATTAAGAC+CGG | 0.596686 | 7_3:-76246124 | Msa1124980:intron |
| CGTCAGATCTTTGACAGTCG+TGG | 0.597878 | 7_3:-76250423 | Msa1124980:CDS |
| AGGATCTGACTATCTTGGCA+AGG | 0.598318 | 7_3:-76249771 | Msa1124980:CDS |
| TGAAGACGAACCTCGACGGT+AGG | 0.599041 | 7_3:+76250396 | None:intergenic |
| AAGCAATAAAACCTGAGGCT+CGG | 0.599744 | 7_3:+76245431 | None:intergenic |
| GTGTCATGACCAGCCACAGA+AGG | 0.602021 | 7_3:-76246405 | Msa1124980:intron |
| CACGACTGTCAAAGATCTGA+CGG | 0.602120 | 7_3:+76250424 | None:intergenic |
| GCAAGACGCTCTGACCTGCA+AGG | 0.602568 | 7_3:+76246097 | None:intergenic |
| GGATCTGACTATCTTGGCAA+GGG | 0.603603 | 7_3:-76249770 | Msa1124980:CDS |
| ACGACTGTCAAAGATCTGAC+GGG | 0.605306 | 7_3:+76250425 | None:intergenic |
| ATGGGGTTGGTGCAAACAAA+AGG | 0.606880 | 7_3:-76248877 | Msa1124980:intron |
| ACCATTAATCACATTGAAAG+CGG | 0.610449 | 7_3:+76248270 | None:intergenic |
| GCTTCTAGTATGGCTCGACA+GGG | 0.610899 | 7_3:+76245903 | None:intergenic |
| GACAAAGTTCAAACCTTCTG+TGG | 0.611804 | 7_3:+76246392 | None:intergenic |
| AGCTCTAGCGAAAGTACCAT+CGG | 0.612079 | 7_3:+76250251 | None:intergenic |
| GCTAGAGCTGCTGTTCCTAG+TGG | 0.613085 | 7_3:-76250237 | Msa1124980:CDS |
| GAGCACTATGCTAAGATGAC+CGG | 0.616214 | 7_3:-76246795 | Msa1124980:CDS |
| GATCTGACGGGCCTTGATGG+AGG | 0.617525 | 7_3:+76250437 | None:intergenic |
| TTTGTTGTATACGTAGCCAG+TGG | 0.625526 | 7_3:+76245553 | None:intergenic |
| ATTGACAAAGCTGGTTACAC+CGG | 0.627043 | 7_3:-76247652 | Msa1124980:CDS |
| ATACCAGTGGATGCACCACT+AGG | 0.628478 | 7_3:+76250222 | None:intergenic |
| GATGCAAACCGACCTTCAGA+TGG | 0.629057 | 7_3:+76248060 | None:intergenic |
| CAATAAAACCTGAGGCTCGG+TGG | 0.630433 | 7_3:+76245434 | None:intergenic |
| GCTCTTGAGTTAAGAGATGG+AGG | 0.631055 | 7_3:-76249791 | Msa1124980:CDS |
| TGTTTGCAGTGGAGAGACTG+AGG | 0.633750 | 7_3:-76246275 | Msa1124980:intron |
| CTAATTATTAGGTATTTACG+AGG | 0.636389 | 7_3:-76249813 | Msa1124980:intron |
| TTGTTGTATACGTAGCCAGT+GGG | 0.637900 | 7_3:+76245554 | None:intergenic |
| GGCTTCAATACTCTCAGTCA+CGG | 0.640921 | 7_3:+76246456 | None:intergenic |
| TGCACCAGCATTGATCGGCA+AGG | 0.641409 | 7_3:-76249145 | Msa1124980:intron |
| GCAGCTATTGAGAATTGAGG+AGG | 0.642636 | 7_3:-76245969 | Msa1124980:intron |
| GAAGTGAAGACGAACCTCGA+CGG | 0.646889 | 7_3:+76250392 | None:intergenic |
| TCAAAAGTATCACTACCCAC+TGG | 0.647418 | 7_3:-76245569 | Msa1124980:three_prime_UTR |
| GGTCAAGATGCAGTAAATGT+TGG | 0.647677 | 7_3:-76247742 | Msa1124980:CDS |
| GCGTCTTGCCAAGTACAACC+AGG | 0.651331 | 7_3:-76246083 | Msa1124980:intron |
| TAGCCAACCCAAGCAACCGG+TGG | 0.655770 | 7_3:+76245513 | None:intergenic |
| TGAGCAATGAGATTTGGCTG+CGG | 0.657198 | 7_3:-76245844 | Msa1124980:three_prime_UTR |
| GGAAGTCTATCACCATCTGA+AGG | 0.660829 | 7_3:-76248072 | Msa1124980:intron |
| TGCAATGATGGTGTTCACGT+TGG | 0.669626 | 7_3:+76249164 | None:intergenic |
| GTAACCAGCTTTGTCAATGG+CGG | 0.670465 | 7_3:+76247657 | None:intergenic |
| TCTCTTGGTTACCAACCCCA+AGG | 0.674267 | 7_3:-76246736 | Msa1124980:intron |
| GAACTGTTAATGAATGGGGT+TGG | 0.674740 | 7_3:-76248890 | Msa1124980:CDS |
| TTGTAAAGACAGATGCGTTG+TGG | 0.674792 | 7_3:-76245354 | Msa1124980:three_prime_UTR |
| GTTGATATAACCGTATCCGA+TGG | 0.679936 | 7_3:-76250267 | Msa1124980:CDS |
| AGTTCAAGCAATAAAACCTG+AGG | 0.680048 | 7_3:+76245426 | None:intergenic |
| CTCACAGAAGATATCTGGAG+AGG | 0.680128 | 7_3:-76246898 | Msa1124980:CDS |
| GACGGAACTGTTAATGAATG+GGG | 0.691515 | 7_3:-76248894 | Msa1124980:CDS |
| GTAAATGTTGGTGATGAAGG+TGG | 0.697402 | 7_3:-76247730 | Msa1124980:CDS |
| TCGTGGCAATCCTACCGTCG+AGG | 0.699567 | 7_3:-76250406 | Msa1124980:intron |
| AGCTTCTGAGTTCTACAAGG+AGG | 0.702282 | 7_3:-76247504 | Msa1124980:CDS |
| TTGACAATCCAGAACAACGA+CGG | 0.703661 | 7_3:-76246921 | Msa1124980:intron |
| CTTCTAGTATGGCTCGACAG+GGG | 0.721455 | 7_3:+76245904 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTCAAAAATAAAATTAAA+CGG | + | chr7_3:76245950-76245969 | None:intergenic | 10.0% |
| !!! | TATTTTTGAAACTAATTATT+AGG | - | chr7_3:76245958-76245977 | Msa1124980:CDS | 10.0% |
| !! | AGTTGTATATATAAATAAAA+TGG | + | chr7_3:76248657-76248676 | None:intergenic | 10.0% |
| !!! | ATGAATTTTTTTTATTCTTT+TGG | - | chr7_3:76249081-76249100 | Msa1124980:intron | 10.0% |
| !!! | TGAATTTTTTTTATTCTTTT+GGG | - | chr7_3:76249082-76249101 | Msa1124980:intron | 10.0% |
| !! | AATCTGATTATGATTATTAT+AGG | - | chr7_3:76245493-76245512 | Msa1124980:three_prime_UTR | 15.0% |
| !!! | TTTTTGTGTGTTAATTATTA+TGG | - | chr7_3:76245639-76245658 | Msa1124980:three_prime_UTR | 15.0% |
| !! | TTGAAAATCATCATAAATAA+CGG | + | chr7_3:76245691-76245710 | None:intergenic | 15.0% |
| !!! | TAATAACTTGATATATCTTT+TGG | + | chr7_3:76246186-76246205 | None:intergenic | 15.0% |
| !!! | TGTATTCATCTAATATTTTT+TGG | - | chr7_3:76247219-76247238 | Msa1124980:intron | 15.0% |
| !!! | ATCTAATATTTTTTGGTATT+CGG | - | chr7_3:76247226-76247245 | Msa1124980:intron | 15.0% |
| !! | GGTATAAATTATAAAATATC+CGG | - | chr7_3:76248572-76248591 | Msa1124980:intron | 15.0% |
| !! | ATAAAAAGGTCAAAATTTAT+TGG | + | chr7_3:76250035-76250054 | None:intergenic | 15.0% |
| !!! | ATTTTGACCTTTTTATTTTA+TGG | - | chr7_3:76250039-76250058 | Msa1124980:intron | 15.0% |
| !!! | TTTTGACCTTTTTATTTTAT+GGG | - | chr7_3:76250040-76250059 | Msa1124980:intron | 15.0% |
| !!! | TTTTCATCAATTCTATTTTG+TGG | - | chr7_3:76245598-76245617 | Msa1124980:three_prime_UTR | 20.0% |
| !! | GAAATCTACTTAAATATCTA+TGG | + | chr7_3:76245869-76245888 | None:intergenic | 20.0% |
| !! | TTAAGAAACAGAAAATATGA+TGG | + | chr7_3:76246060-76246079 | None:intergenic | 20.0% |
| !! | AAATAGAACGAAATGAAAAT+AGG | + | chr7_3:76246257-76246276 | None:intergenic | 20.0% |
| !!! | GTCTTTTATTTTGTCTTTTT+TGG | - | chr7_3:76246277-76246296 | Msa1124980:intron | 20.0% |
| !!! | TTTATTTTGTCTTTTTTGGA+AGG | - | chr7_3:76246281-76246300 | Msa1124980:intron | 20.0% |
| !! | ATGATAAAAAAAACTGTCAT+CGG | + | chr7_3:76246713-76246732 | None:intergenic | 20.0% |
| !! | TCACTTAACTATACTATAAT+GGG | + | chr7_3:76246739-76246758 | None:intergenic | 20.0% |
| !! | TTCACTTAACTATACTATAA+TGG | + | chr7_3:76246740-76246759 | None:intergenic | 20.0% |
| !! | AAAATTAATTCCATTACTAG+AGG | - | chr7_3:76246778-76246797 | Msa1124980:CDS | 20.0% |
| !!! | AAAATTTAGATAATGCCTTT+TGG | + | chr7_3:76247767-76247786 | None:intergenic | 20.0% |
| !!! | AGATTTGTTTCATATTATTG+AGG | + | chr7_3:76247796-76247815 | None:intergenic | 20.0% |
| !!! | ACATTTTGTATAATGTTCTT+AGG | - | chr7_3:76248233-76248252 | Msa1124980:intron | 20.0% |
| !! | TATAAATAAAATGGCTAACA+AGG | + | chr7_3:76248648-76248667 | None:intergenic | 20.0% |
| !! | TATATATACAACTTGAAAGA+TGG | - | chr7_3:76248664-76248683 | Msa1124980:intron | 20.0% |
| !! | TACAAATTAATATACGACAT+TGG | - | chr7_3:76248739-76248758 | Msa1124980:CDS | 20.0% |
| !!! | TCAACATAAATGTTTTTTTG+AGG | + | chr7_3:76248806-76248825 | None:intergenic | 20.0% |
| !! | AAAAGGAAACGTTATTATAT+TGG | + | chr7_3:76249623-76249642 | None:intergenic | 20.0% |
| !!! | TTTGACCTTTTTATTTTATG+GGG | - | chr7_3:76250041-76250060 | Msa1124980:intron | 20.0% |
| !! | TAATTAGACGTCATAAAATT+TGG | - | chr7_3:76250298-76250317 | Msa1124980:intron | 20.0% |
| !! | TACGATAAACAAATTAGATT+TGG | - | chr7_3:76250562-76250581 | Msa1124980:five_prime_UTR | 20.0% |
| ! | CTAATTATTAGGTATTTACG+AGG | - | chr7_3:76245969-76245988 | Msa1124980:intron | 25.0% |
| !! | AAAGTATTTCTCCTAATGAA+GGG | + | chr7_3:76246122-76246141 | None:intergenic | 25.0% |
| !!! | AAAAGTATTTCTCCTAATGA+AGG | + | chr7_3:76246123-76246142 | None:intergenic | 25.0% |
| !!! | TTGTGCTTTAGATTTCTTTT+TGG | - | chr7_3:76246220-76246239 | Msa1124980:intron | 25.0% |
| ! | TTTCCATTCCTTCATAAAAT+AGG | + | chr7_3:76246325-76246344 | None:intergenic | 25.0% |
| !! | TGGTAGTTTTCTAATCATAA+AGG | + | chr7_3:76246353-76246372 | None:intergenic | 25.0% |
| ! | TATGATTAGAAAACTACCAA+TGG | - | chr7_3:76246354-76246373 | Msa1124980:intron | 25.0% |
| ! | TTGAGAAAAGAAATGAATGA+AGG | + | chr7_3:76246391-76246410 | None:intergenic | 25.0% |
| ! | ACCAAAAAAGAAATGAAACA+AGG | + | chr7_3:76246442-76246461 | None:intergenic | 25.0% |
| !! | TATTACATTAGTGTTTTCTC+TGG | - | chr7_3:76246674-76246693 | Msa1124980:intron | 25.0% |
| ! | CACTTAACTATACTATAATG+GGG | + | chr7_3:76246738-76246757 | None:intergenic | 25.0% |
| ! | AAAAAACAATCAGAACTAGA+AGG | + | chr7_3:76246989-76247008 | None:intergenic | 25.0% |
| !!! | TTCTAGTTCTGATTGTTTTT+TGG | - | chr7_3:76246988-76247007 | Msa1124980:intron | 25.0% |
| !!! | TTCTGATTGTTTTTTGGTTT+TGG | - | chr7_3:76246994-76247013 | Msa1124980:intron | 25.0% |
| ! | TGGTACTTAACTGTATTTAA+AGG | - | chr7_3:76247123-76247142 | Msa1124980:intron | 25.0% |
| ! | AATGGACATAAAAGAAAACT+GGG | + | chr7_3:76247381-76247400 | None:intergenic | 25.0% |
| ! | AAATGGACATAAAAGAAAAC+TGG | + | chr7_3:76247382-76247401 | None:intergenic | 25.0% |
| ! | AAACGACTCAACTAAAAAAA+TGG | + | chr7_3:76247399-76247418 | None:intergenic | 25.0% |
| !!! | TGTTTTTTACCAGTAATAAG+CGG | - | chr7_3:76247841-76247860 | Msa1124980:intron | 25.0% |
| !! | CTCTATTCAATTTTCTGTTT+CGG | - | chr7_3:76248171-76248190 | Msa1124980:intron | 25.0% |
| !! | AATTTTCTGTTTCGGTTATT+TGG | - | chr7_3:76248179-76248198 | Msa1124980:intron | 25.0% |
| ! | TTCTCAGATTTATTCATTTG+AGG | - | chr7_3:76248203-76248222 | Msa1124980:intron | 25.0% |
| ! | TCTCAGATTTATTCATTTGA+GGG | - | chr7_3:76248204-76248223 | Msa1124980:intron | 25.0% |
| !! | AACAATAGAAACAGTTCTTT+TGG | - | chr7_3:76248544-76248563 | Msa1124980:intron | 25.0% |
| ! | ATTCTTAACCCTTCTTAAAA+AGG | + | chr7_3:76248599-76248618 | None:intergenic | 25.0% |
| ! | TCATATAATATACAGACCTT+GGG | + | chr7_3:76249065-76249084 | None:intergenic | 25.0% |
| ! | TTCATATAATATACAGACCT+TGG | + | chr7_3:76249066-76249085 | None:intergenic | 25.0% |
| ! | ATCAATACATTTATCTACCT+AGG | + | chr7_3:76249259-76249278 | None:intergenic | 25.0% |
| ! | CAACTGTAAGATATTTAACA+AGG | - | chr7_3:76249448-76249467 | Msa1124980:intron | 25.0% |
| !!! | TCATATATTTTTGTTTGCAG+TGG | - | chr7_3:76249496-76249515 | Msa1124980:intron | 25.0% |
| ! | AACGTTATTATATTGGACAT+GGG | + | chr7_3:76249616-76249635 | None:intergenic | 25.0% |
| ! | AAACGTTATTATATTGGACA+TGG | + | chr7_3:76249617-76249636 | None:intergenic | 25.0% |
| ! | TCAAGATACGATTAACAAAA+AGG | + | chr7_3:76249640-76249659 | None:intergenic | 25.0% |
| !! | TTTGTTGATTACATTTGCTT+CGG | - | chr7_3:76249728-76249747 | Msa1124980:intron | 25.0% |
| ! | ATAAAATTTGGTCATGCATT+AGG | - | chr7_3:76250310-76250329 | Msa1124980:intron | 25.0% |
| ACTATAAATAACCCATAAGC+AGG | - | chr7_3:76245216-76245235 | Msa1124980:three_prime_UTR | 30.0% | |
| ! | AGATTTCGTAGATTTTACTC+TGG | - | chr7_3:76245882-76245901 | Msa1124980:three_prime_UTR | 30.0% |
| ! | CTCAACTACCTATTTTATGA+AGG | - | chr7_3:76246314-76246333 | Msa1124980:intron | 30.0% |
| ! | CTACCTATTTTATGAAGGAA+TGG | - | chr7_3:76246319-76246338 | Msa1124980:intron | 30.0% |
| AAAAAGAAATGAAACAAGGC+AGG | + | chr7_3:76246438-76246457 | None:intergenic | 30.0% | |
| !!! | GCCTTGTTTCATTTCTTTTT+TGG | - | chr7_3:76246438-76246457 | Msa1124980:CDS | 30.0% |
| TACTGCATAAAAAAGTGAGA+TGG | - | chr7_3:76246513-76246532 | Msa1124980:intron | 30.0% | |
| !!! | ATTCTCACCTGATTTTTTCT+TGG | - | chr7_3:76246579-76246598 | Msa1124980:intron | 30.0% |
| GGATAAATTACCTTGTATAG+AGG | + | chr7_3:76247095-76247114 | None:intergenic | 30.0% | |
| ATGGACATAAAAGAAAACTG+GGG | + | chr7_3:76247380-76247399 | None:intergenic | 30.0% | |
| ACCATTAATCACATTGAAAG+CGG | + | chr7_3:76247515-76247534 | None:intergenic | 30.0% | |
| TACTGGTAAAAAACAAAGCT+TGG | + | chr7_3:76247836-76247855 | None:intergenic | 30.0% | |
| !!! | GTTTTTTACCAGTAATAAGC+GGG | - | chr7_3:76247842-76247861 | Msa1124980:intron | 30.0% |
| GCTGTGATTAAGAAGAAATA+TGG | - | chr7_3:76248019-76248038 | Msa1124980:intron | 30.0% | |
| CGAAACAGAAAATTGAATAG+AGG | + | chr7_3:76248173-76248192 | None:intergenic | 30.0% | |
| ! | TAATGTTCTTAGGTTGTCAT+TGG | - | chr7_3:76248243-76248262 | Msa1124980:CDS | 30.0% |
| ATCATACGATTTGAACTTCA+AGG | - | chr7_3:76248305-76248324 | Msa1124980:CDS | 30.0% | |
| TAATAACAACTCTGGTACTA+AGG | + | chr7_3:76248512-76248531 | None:intergenic | 30.0% | |
| GATCCTCAATTGAAACAATT+GGG | + | chr7_3:76248947-76248966 | None:intergenic | 30.0% | |
| ATCACCAACAATTTGTACAT+TGG | + | chr7_3:76249024-76249043 | None:intergenic | 30.0% | |
| CATATAATATACAGACCTTG+GGG | + | chr7_3:76249064-76249083 | None:intergenic | 30.0% | |
| !! | TCAAGGTACTCTCATTTTAT+TGG | - | chr7_3:76249204-76249223 | Msa1124980:intron | 30.0% |
| ! | CTTGACATATTTGAAACAAC+AGG | - | chr7_3:76249288-76249307 | Msa1124980:intron | 30.0% |
| ACAATTGTTGAACTGAGATA+AGG | + | chr7_3:76249577-76249596 | None:intergenic | 30.0% | |
| TTGTTAATCGTATCTTGAAC+AGG | - | chr7_3:76249642-76249661 | Msa1124980:intron | 30.0% | |
| TGTTAATCGTATCTTGAACA+GGG | - | chr7_3:76249643-76249662 | Msa1124980:intron | 30.0% | |
| AAATCTCATTGCTCAAACTA+AGG | + | chr7_3:76249933-76249952 | None:intergenic | 30.0% | |
| ! | TTAGTTTGAGCAATGAGATT+TGG | - | chr7_3:76249932-76249951 | Msa1124980:intron | 30.0% |
| ! | ACACAACTTTAAAAATCCAG+GGG | + | chr7_3:76250079-76250098 | None:intergenic | 30.0% |
| ! | CACACAACTTTAAAAATCCA+GGG | + | chr7_3:76250080-76250099 | None:intergenic | 30.0% |
| GTTACTACTCAACTGAAAAT+TGG | + | chr7_3:76250152-76250171 | None:intergenic | 30.0% | |
| ! | TGAGTAGTAACGATTTTTGT+TGG | - | chr7_3:76250161-76250180 | Msa1124980:intron | 30.0% |
| ACCGTATAAAATATGTGGTT+GGG | - | chr7_3:76250509-76250528 | Msa1124980:five_prime_UTR | 30.0% | |
| ! | ACCCAACCACATATTTTATA+CGG | + | chr7_3:76250513-76250532 | None:intergenic | 30.0% |
| !! | AAAAGAAGCGAGAGTTGATA+GGG | - | chr7_3:76245193-76245212 | Msa1124980:three_prime_UTR | 35.0% |
| !! | AGATTTTACTCTGGTACTGA+TGG | - | chr7_3:76245891-76245910 | Msa1124980:exon | 35.0% |
| TTCCAGTTATACCCTTCATT+AGG | - | chr7_3:76246108-76246127 | Msa1124980:CDS | 35.0% | |
| ATCACAATGACCTCTAGTAA+TGG | + | chr7_3:76246791-76246810 | None:intergenic | 35.0% | |
| GACAGAAATTGACAACTTCA+TGG | - | chr7_3:76246854-76246873 | Msa1124980:CDS | 35.0% | |
| TTGACGGAACTGTTAATGAA+TGG | - | chr7_3:76246886-76246905 | Msa1124980:CDS | 35.0% | |
| TGACGGAACTGTTAATGAAT+GGG | - | chr7_3:76246887-76246906 | Msa1124980:CDS | 35.0% | |
| TGTGATAGATTACGATCTAC+AGG | + | chr7_3:76246947-76246966 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTTTGGTTTCAGCT+TGG | - | chr7_3:76247005-76247024 | Msa1124980:intron | 35.0% |
| CCTTGTATAGAGGAATCTTT+AGG | + | chr7_3:76247085-76247104 | None:intergenic | 35.0% | |
| CCTAAAGATTCCTCTATACA+AGG | - | chr7_3:76247082-76247101 | Msa1124980:intron | 35.0% | |
| GGTAATTTATCCATGAACTG+TGG | - | chr7_3:76247103-76247122 | Msa1124980:intron | 35.0% | |
| ATTTAAAGGCCTCTGTTAGT+TGG | - | chr7_3:76247137-76247156 | Msa1124980:intron | 35.0% | |
| TCAACTTCAATTACACGACA+TGG | + | chr7_3:76247165-76247184 | None:intergenic | 35.0% | |
| TTCGGTACTTAAGAACAACA+TGG | - | chr7_3:76247244-76247263 | Msa1124980:intron | 35.0% | |
| CAAAACCAAGTTCTTGTTAC+CGG | + | chr7_3:76247485-76247504 | None:intergenic | 35.0% | |
| CCATTAATCACATTGAAAGC+GGG | + | chr7_3:76247514-76247533 | None:intergenic | 35.0% | |
| GCTTTCAATGTGATTAATGG+TGG | - | chr7_3:76247514-76247533 | Msa1124980:CDS | 35.0% | |
| ATTCGTTTACCTCTTCCAAA+AGG | - | chr7_3:76247749-76247768 | Msa1124980:CDS | 35.0% | |
| !! | TAGATAATGCCTTTTGGAAG+AGG | + | chr7_3:76247761-76247780 | None:intergenic | 35.0% |
| TCTATCCACATATGCTTTGA+TGG | - | chr7_3:76247918-76247937 | Msa1124980:intron | 35.0% | |
| AAGAACCATCAAAGCATATG+TGG | + | chr7_3:76247926-76247945 | None:intergenic | 35.0% | |
| GTTCCTTCTGATATCATTTC+AGG | - | chr7_3:76247997-76248016 | Msa1124980:intron | 35.0% | |
| !!! | TCCTTGTTTTCCTGAATGTT+GGG | + | chr7_3:76248085-76248104 | None:intergenic | 35.0% |
| !!! | TTCCTTGTTTTCCTGAATGT+TGG | + | chr7_3:76248086-76248105 | None:intergenic | 35.0% |
| AACATTCAGGAAAACAAGGA+AGG | - | chr7_3:76248085-76248104 | Msa1124980:CDS | 35.0% | |
| GGAGAAAAAACTTACTTTGC+CGG | + | chr7_3:76248152-76248171 | None:intergenic | 35.0% | |
| ! | TTCTTAGGTTGTCATTGGAA+TGG | - | chr7_3:76248248-76248267 | Msa1124980:CDS | 35.0% |
| AAAGAGTGAGAAAGGAAAGT+CGG | + | chr7_3:76248421-76248440 | None:intergenic | 35.0% | |
| ! | ACTTTCCTTTCTCACTCTTT+TGG | - | chr7_3:76248421-76248440 | Msa1124980:intron | 35.0% |
| AGGCTTTCTAATAACAACTC+TGG | + | chr7_3:76248520-76248539 | None:intergenic | 35.0% | |
| ! | AGAGTTGTTATTAGAAAGCC+TGG | - | chr7_3:76248519-76248538 | Msa1124980:intron | 35.0% |
| ! | GAGTTGTTATTAGAAAGCCT+GGG | - | chr7_3:76248520-76248539 | Msa1124980:intron | 35.0% |
| !! | AACTGTTTCTATTGTTACCC+AGG | + | chr7_3:76248540-76248559 | None:intergenic | 35.0% |
| ! | AGAAACAGTTCTTTTGGCAA+AGG | - | chr7_3:76248550-76248569 | Msa1124980:intron | 35.0% |
| ! | GAAACAGTTCTTTTGGCAAA+GGG | - | chr7_3:76248551-76248570 | Msa1124980:intron | 35.0% |
| !! | ATATCCGGTCCTTTTTAAGA+AGG | - | chr7_3:76248587-76248606 | Msa1124980:intron | 35.0% |
| !! | TATCCGGTCCTTTTTAAGAA+GGG | - | chr7_3:76248588-76248607 | Msa1124980:intron | 35.0% |
| TAACCCTTCTTAAAAAGGAC+CGG | + | chr7_3:76248594-76248613 | None:intergenic | 35.0% | |
| GTACCCAATTGTTTCAATTG+AGG | - | chr7_3:76248941-76248960 | Msa1124980:CDS | 35.0% | |
| GGATCCTCAATTGAAACAAT+TGG | + | chr7_3:76248948-76248967 | None:intergenic | 35.0% | |
| GGAACCAATGTACAAATTGT+TGG | - | chr7_3:76249017-76249036 | Msa1124980:intron | 35.0% | |
| !! | AATTGTTGGTGATGATCTCT+TGG | - | chr7_3:76249031-76249050 | Msa1124980:intron | 35.0% |
| AGCAAAAAGCAACAAATCAG+AGG | + | chr7_3:76249126-76249145 | None:intergenic | 35.0% | |
| AAACAACAGGTCAACCAAAT+TGG | - | chr7_3:76249301-76249320 | Msa1124980:intron | 35.0% | |
| GTAATCAACAAACACTAACC+TGG | + | chr7_3:76249720-76249739 | None:intergenic | 35.0% | |
| AAGCTCAAGCAGTTTCTAAT+TGG | - | chr7_3:76249776-76249795 | Msa1124980:CDS | 35.0% | |
| TCAAGCAGTTTCTAATTGGT+TGG | - | chr7_3:76249780-76249799 | Msa1124980:CDS | 35.0% | |
| CACTTTCAAAGCTTCTAGTA+TGG | + | chr7_3:76249892-76249911 | None:intergenic | 35.0% | |
| !! | CATACTAGAAGCTTTGAAAG+TGG | - | chr7_3:76249890-76249909 | Msa1124980:intron | 35.0% |
| !! | AGCTTTGAAAGTGGAAAAAC+CGG | - | chr7_3:76249899-76249918 | Msa1124980:intron | 35.0% |
| ! | TCAAACTAAGGTTGGTTATC+CGG | + | chr7_3:76249921-76249940 | None:intergenic | 35.0% |
| GTCAGCCCCATAAAATAAAA+AGG | + | chr7_3:76250049-76250068 | None:intergenic | 35.0% | |
| ! | CCACACAACTTTAAAAATCC+AGG | + | chr7_3:76250081-76250100 | None:intergenic | 35.0% |
| !!! | CCTGGATTTTTAAAGTTGTG+TGG | - | chr7_3:76250078-76250097 | Msa1124980:intron | 35.0% |
| ATTGGAACGACATTGAAAGT+AGG | + | chr7_3:76250134-76250153 | None:intergenic | 35.0% | |
| AGTTCAAGCAATAAAACCTG+AGG | + | chr7_3:76250359-76250378 | None:intergenic | 35.0% | |
| CTGAAAAGAGAACTGTATTG+TGG | - | chr7_3:76250465-76250484 | Msa1124980:exon | 35.0% | |
| CAGACACCGTATAAAATATG+TGG | - | chr7_3:76250504-76250523 | Msa1124980:five_prime_UTR | 35.0% | |
| CACCGTATAAAATATGTGGT+TGG | - | chr7_3:76250508-76250527 | Msa1124980:five_prime_UTR | 35.0% | |
| AAATATGTGGTTGGGTGTTT+AGG | - | chr7_3:76250517-76250536 | Msa1124980:five_prime_UTR | 35.0% | |
| !! | TCACATCGATTTCTTCTCCA+TGG | - | chr7_3:76245313-76245332 | Msa1124980:three_prime_UTR | 40.0% |
| GAAATCGATGAGCGATAGAT+CGG | + | chr7_3:76245443-76245462 | None:intergenic | 40.0% | |
| GTTGATATAACCGTATCCGA+TGG | - | chr7_3:76245515-76245534 | Msa1124980:three_prime_UTR | 40.0% | |
| ! | CTCCTAATGAAGGGTATAAC+TGG | + | chr7_3:76246113-76246132 | None:intergenic | 40.0% |
| GAAATGAATGAAGGCTCAGA+AGG | + | chr7_3:76246382-76246401 | None:intergenic | 40.0% | |
| !! | ATCATTGCACCAGCATTGAT+CGG | - | chr7_3:76246632-76246651 | Msa1124980:intron | 40.0% |
| CAATTTCTGTCTGCTGAGTT+GGG | + | chr7_3:76246845-76246864 | None:intergenic | 40.0% | |
| TCAATTTCTGTCTGCTGAGT+TGG | + | chr7_3:76246846-76246865 | None:intergenic | 40.0% | |
| TTCATGGTTCAGAAGCTTGA+CGG | - | chr7_3:76246870-76246889 | Msa1124980:CDS | 40.0% | |
| GACGGAACTGTTAATGAATG+GGG | - | chr7_3:76246888-76246907 | Msa1124980:CDS | 40.0% | |
| GAACTGTTAATGAATGGGGT+TGG | - | chr7_3:76246892-76246911 | Msa1124980:CDS | 40.0% | |
| AGACACTGCTAATATGGCAT+TGG | + | chr7_3:76247033-76247052 | None:intergenic | 40.0% | |
| TGCAAGAGACACTGCTAATA+TGG | + | chr7_3:76247039-76247058 | None:intergenic | 40.0% | |
| CAGTTAAGTACCACAGTTCA+TGG | + | chr7_3:76247116-76247135 | None:intergenic | 40.0% | |
| ACTTCTTTATGTCCATTCCG+TGG | - | chr7_3:76247437-76247456 | Msa1124980:intron | 40.0% | |
| CTTCTTTATGTCCATTCCGT+GGG | - | chr7_3:76247438-76247457 | Msa1124980:intron | 40.0% | |
| CAGCATATTGCAAACATTGC+CGG | - | chr7_3:76247463-76247482 | Msa1124980:intron | 40.0% | |
| CCCGCTTTCAATGTGATTAA+TGG | - | chr7_3:76247511-76247530 | Msa1124980:CDS | 40.0% | |
| !! | ATTAATGGTGGATCACATGC+AGG | - | chr7_3:76247526-76247545 | Msa1124980:CDS | 40.0% |
| AGGAAACAAACTTGCAATGC+AGG | - | chr7_3:76247546-76247565 | Msa1124980:intron | 40.0% | |
| TTCTGATGTCATGCATATGC+AGG | - | chr7_3:76247629-76247648 | Msa1124980:intron | 40.0% | |
| CATGCATATGCAGGAGTTTA+TGG | - | chr7_3:76247638-76247657 | Msa1124980:intron | 40.0% | |
| GAGTTTATGGTTCTTCCTGT+TGG | - | chr7_3:76247651-76247670 | Msa1124980:CDS | 40.0% | |
| TTTCAAGGAAGCCATGAAGA+TGG | - | chr7_3:76247683-76247702 | Msa1124980:CDS | 40.0% | |
| TTCAAGGAAGCCATGAAGAT+GGG | - | chr7_3:76247684-76247703 | Msa1124980:CDS | 40.0% | |
| !! | TAAAAGCACCCGCTTATTAC+TGG | + | chr7_3:76247853-76247872 | None:intergenic | 40.0% |
| ! | TAATAAGCGGGTGCTTTTAC+TGG | - | chr7_3:76247854-76247873 | Msa1124980:intron | 40.0% |
| CAGCCTGAAATGATATCAGA+AGG | + | chr7_3:76248003-76248022 | None:intergenic | 40.0% | |
| GGTCAAGATGCAGTAAATGT+TGG | - | chr7_3:76248040-76248059 | Msa1124980:intron | 40.0% | |
| !! | GCAGTAAATGTTGGTGATGA+AGG | - | chr7_3:76248049-76248068 | Msa1124980:intron | 40.0% |
| !! | GTAAATGTTGGTGATGAAGG+TGG | - | chr7_3:76248052-76248071 | Msa1124980:intron | 40.0% |
| !! | CTTGTTTTCCTGAATGTTGG+GGG | + | chr7_3:76248083-76248102 | None:intergenic | 40.0% |
| !!! | CCTTGTTTTCCTGAATGTTG+GGG | + | chr7_3:76248084-76248103 | None:intergenic | 40.0% |
| TCAGGAAAACAAGGAAGGTT+TGG | - | chr7_3:76248090-76248109 | Msa1124980:CDS | 40.0% | |
| ATTGACAAAGCTGGTTACAC+CGG | - | chr7_3:76248130-76248149 | Msa1124980:CDS | 40.0% | |
| ! | AAGGATTTGAGACTTCTGAG+CGG | + | chr7_3:76248382-76248401 | None:intergenic | 40.0% |
| AAGCACCAAAAGAGTGAGAA+AGG | + | chr7_3:76248429-76248448 | None:intergenic | 40.0% | |
| CTAAGGTGTATAATCAGCAC+AGG | + | chr7_3:76248495-76248514 | None:intergenic | 40.0% | |
| TTGACAATCCAGAACAACGA+CGG | - | chr7_3:76248861-76248880 | Msa1124980:intron | 40.0% | |
| ! | AATTGAGGATCCTTTTGACC+AGG | - | chr7_3:76248956-76248975 | Msa1124980:intron | 40.0% |
| !! | TACATTGGTTCCAATCTCAC+CGG | + | chr7_3:76249009-76249028 | None:intergenic | 40.0% |
| TAATATACAGACCTTGGGGT+TGG | + | chr7_3:76249060-76249079 | None:intergenic | 40.0% | |
| ! | ATGCAATGCTCTTTTGCTCA+AGG | - | chr7_3:76249187-76249206 | Msa1124980:intron | 40.0% |
| ! | GGCAAATATTTTCTGCAGAG+AGG | - | chr7_3:76249225-76249244 | Msa1124980:intron | 40.0% |
| GACAAAGTTCAAACCTTCTG+TGG | + | chr7_3:76249393-76249412 | None:intergenic | 40.0% | |
| AACAGCAAGATCAGCAATGA+AGG | + | chr7_3:76249536-76249555 | None:intergenic | 40.0% | |
| ! | TTCATTGCTGATCTTGCTGT+TGG | - | chr7_3:76249535-76249554 | Msa1124980:intron | 40.0% |
| !! | TCTTGCTGTTGGTTTGTCAA+CGG | - | chr7_3:76249546-76249565 | Msa1124980:intron | 40.0% |
| GAACAGGGTCAAATTAAGAC+CGG | - | chr7_3:76249658-76249677 | Msa1124980:intron | 40.0% | |
| AACACTAACCTGGTTGTACT+TGG | + | chr7_3:76249710-76249729 | None:intergenic | 40.0% | |
| TACATTTGCTTCGGTTGCTT+CGG | - | chr7_3:76249737-76249756 | Msa1124980:intron | 40.0% | |
| TTGGCAGCTATTGAGAATTG+AGG | - | chr7_3:76249810-76249829 | Msa1124980:intron | 40.0% | |
| CTCATTGCTCAAACTAAGGT+TGG | + | chr7_3:76249929-76249948 | None:intergenic | 40.0% | |
| !! | TCAAAAGTATCACTACCCAC+TGG | - | chr7_3:76250213-76250232 | Msa1124980:intron | 40.0% |
| TTGTTGTATACGTAGCCAGT+GGG | + | chr7_3:76250231-76250250 | None:intergenic | 40.0% | |
| ! | TTTGTTGTATACGTAGCCAG+TGG | + | chr7_3:76250232-76250251 | None:intergenic | 40.0% |
| AAGCAATAAAACCTGAGGCT+CGG | + | chr7_3:76250354-76250373 | None:intergenic | 40.0% | |
| CAACTTAAGCAATCGTGAAG+AGG | + | chr7_3:76250411-76250430 | None:intergenic | 40.0% | |
| TTGTAAAGACAGATGCGTTG+TGG | - | chr7_3:76250428-76250447 | Msa1124980:CDS | 40.0% | |
| ! | AGAGTGCGTGTTTTGTGTGA+GGG | + | chr7_3:76245251-76245270 | None:intergenic | 45.0% |
| !! | AAGAGTGCGTGTTTTGTGTG+AGG | + | chr7_3:76245252-76245271 | None:intergenic | 45.0% |
| ACGACTGTCAAAGATCTGAC+GGG | + | chr7_3:76245360-76245379 | None:intergenic | 45.0% | |
| CACGACTGTCAAAGATCTGA+CGG | + | chr7_3:76245361-76245380 | None:intergenic | 45.0% | |
| !! | AGCGAAAGTACCATCGGATA+CGG | + | chr7_3:76245528-76245547 | None:intergenic | 45.0% |
| !! | AGCTCTAGCGAAAGTACCAT+CGG | + | chr7_3:76245534-76245553 | None:intergenic | 45.0% |
| GAGTGAAGCATACATACCAG+TGG | + | chr7_3:76245576-76245595 | None:intergenic | 45.0% | |
| GAGGCTCTTGAGTTAAGAGA+TGG | - | chr7_3:76245988-76246007 | Msa1124980:intron | 45.0% | |
| GCTCTTGAGTTAAGAGATGG+AGG | - | chr7_3:76245991-76246010 | Msa1124980:intron | 45.0% | |
| GATGGAGGATCTGACTATCT+TGG | - | chr7_3:76246006-76246025 | Msa1124980:intron | 45.0% | |
| AGGATCTGACTATCTTGGCA+AGG | - | chr7_3:76246011-76246030 | Msa1124980:intron | 45.0% | |
| GGATCTGACTATCTTGGCAA+GGG | - | chr7_3:76246012-76246031 | Msa1124980:intron | 45.0% | |
| ! | TCTTGGCAAGGGTGTATCAA+AGG | - | chr7_3:76246023-76246042 | Msa1124980:intron | 45.0% |
| GCAGGTGCCAAGAAAAAATC+AGG | + | chr7_3:76246589-76246608 | None:intergenic | 45.0% | |
| !!! | GATTTTTTCTTGGCACCTGC+AGG | - | chr7_3:76246589-76246608 | Msa1124980:intron | 45.0% |
| ! | TGCAATGATGGTGTTCACGT+TGG | + | chr7_3:76246621-76246640 | None:intergenic | 45.0% |
| GATCAATGCTGGTGCAATGA+TGG | + | chr7_3:76246633-76246652 | None:intergenic | 45.0% | |
| CTTGCCTTTATGCAACGAAC+AGG | - | chr7_3:76246818-76246837 | Msa1124980:CDS | 45.0% | |
| !! | ATGGGGTTGGTGCAAACAAA+AGG | - | chr7_3:76246905-76246924 | Msa1124980:CDS | 45.0% |
| GACATGGATCCAACTAACAG+AGG | + | chr7_3:76247149-76247168 | None:intergenic | 45.0% | |
| TTTGCAATATGCTGCACCCA+CGG | + | chr7_3:76247457-76247476 | None:intergenic | 45.0% | |
| CATTGCCGGTAACAAGAACT+TGG | - | chr7_3:76247477-76247496 | Msa1124980:CDS | 45.0% | |
| ATCACATTGAAAGCGGGAAC+AGG | + | chr7_3:76247508-76247527 | None:intergenic | 45.0% | |
| CAAACTCAAGCACACGAGAA+CGG | + | chr7_3:76247587-76247606 | None:intergenic | 45.0% | |
| CTTCATGGCTTCCTTGAAAG+AGG | + | chr7_3:76247682-76247701 | None:intergenic | 45.0% | |
| GGAAGTCTATCACCATCTGA+AGG | - | chr7_3:76247710-76247729 | Msa1124980:CDS | 45.0% | |
| GTCTATCACCATCTGAAGGT+CGG | - | chr7_3:76247714-76247733 | Msa1124980:CDS | 45.0% | |
| GCATATGTGGATAGACACCA+GGG | + | chr7_3:76247913-76247932 | None:intergenic | 45.0% | |
| AGCATATGTGGATAGACACC+AGG | + | chr7_3:76247914-76247933 | None:intergenic | 45.0% | |
| CCCCAACATTCAGGAAAACA+AGG | - | chr7_3:76248081-76248100 | Msa1124980:CDS | 45.0% | |
| ! | GTAACCAGCTTTGTCAATGG+CGG | + | chr7_3:76248128-76248147 | None:intergenic | 45.0% |
| ! | GGTGTAACCAGCTTTGTCAA+TGG | + | chr7_3:76248131-76248150 | None:intergenic | 45.0% |
| TGCAGCTTCTGAGTTCTACA+AGG | - | chr7_3:76248275-76248294 | Msa1124980:CDS | 45.0% | |
| AGCTTCTGAGTTCTACAAGG+AGG | - | chr7_3:76248278-76248297 | Msa1124980:CDS | 45.0% | |
| ! | AGGATTTGAGACTTCTGAGC+GGG | + | chr7_3:76248381-76248400 | None:intergenic | 45.0% |
| GGAAAGTCGGTTGAAGAGAA+GGG | + | chr7_3:76248408-76248427 | None:intergenic | 45.0% | |
| AGGAAAGTCGGTTGAAGAGA+AGG | + | chr7_3:76248409-76248428 | None:intergenic | 45.0% | |
| AGGTGTATAATCAGCACAGG+AGG | + | chr7_3:76248492-76248511 | None:intergenic | 45.0% | |
| CTCACAGAAGATATCTGGAG+AGG | - | chr7_3:76248884-76248903 | Msa1124980:CDS | 45.0% | |
| ! | ATCCTTTTGACCAGGATGAC+TGG | - | chr7_3:76248964-76248983 | Msa1124980:intron | 45.0% |
| ! | TCCTTTTGACCAGGATGACT+GGG | - | chr7_3:76248965-76248984 | Msa1124980:intron | 45.0% |
| GAGCACTATGCTAAGATGAC+CGG | - | chr7_3:76248987-76249006 | Msa1124980:intron | 45.0% | |
| ATTGCCTTCTGAACTCTCTG+TGG | + | chr7_3:76249155-76249174 | None:intergenic | 45.0% | |
| GCAGAGAGGTTATTAGACCT+AGG | - | chr7_3:76249239-76249258 | Msa1124980:intron | 45.0% | |
| TCTCAGTCACGGATCCAATT+TGG | + | chr7_3:76249318-76249337 | None:intergenic | 45.0% | |
| GGCTTCAATACTCTCAGTCA+CGG | + | chr7_3:76249329-76249348 | None:intergenic | 45.0% | |
| ! | AGCCTTTTTGGACATCCTGA+CGG | + | chr7_3:76249350-76249369 | None:intergenic | 45.0% |
| GATGTCCAAAAAGGCTGGAT+GGG | - | chr7_3:76249354-76249373 | Msa1124980:intron | 45.0% | |
| ATGTCCAAAAAGGCTGGATG+GGG | - | chr7_3:76249355-76249374 | Msa1124980:intron | 45.0% | |
| AAGTTCAAACCTTCTGTGGC+TGG | + | chr7_3:76249389-76249408 | None:intergenic | 45.0% | |
| ! | CTAATTGGTTGGTGCTCACT+TGG | - | chr7_3:76249791-76249810 | Msa1124980:CDS | 45.0% |
| GCAGCTATTGAGAATTGAGG+AGG | - | chr7_3:76249813-76249832 | Msa1124980:intron | 45.0% | |
| TTGAGAATTGAGGAGGAGCT+TGG | - | chr7_3:76249820-76249839 | Msa1124980:intron | 45.0% | |
| TGAGCAATGAGATTTGGCTG+CGG | - | chr7_3:76249938-76249957 | Msa1124980:intron | 45.0% | |
| GCAACCAAACTTTACTCCAC+CGG | - | chr7_3:76250253-76250272 | Msa1124980:CDS | 45.0% | |
| ATATAGCCAACCCAAGCAAC+CGG | + | chr7_3:76250275-76250294 | None:intergenic | 45.0% | |
| !! | TTTGAAAAATATTATAAAAT+AGG | - | chr7_3:76245825-76245844 | Msa1124980:three_prime_UTR | 5.0% |
| GGTCTCAGACACCTGCTTAT+GGG | + | chr7_3:76245230-76245249 | None:intergenic | 50.0% | |
| GATGGAGGTAATAGCAGCCA+TGG | + | chr7_3:76245333-76245352 | None:intergenic | 50.0% | |
| GGCTGCTATTACCTCCATCA+AGG | - | chr7_3:76245334-76245353 | Msa1124980:three_prime_UTR | 50.0% | |
| ! | AAAGATCTGACGGGCCTTGA+TGG | + | chr7_3:76245351-76245370 | None:intergenic | 50.0% |
| CGTCAGATCTTTGACAGTCG+TGG | - | chr7_3:76245359-76245378 | Msa1124980:three_prime_UTR | 50.0% | |
| GAAGTGAAGACGAACCTCGA+CGG | + | chr7_3:76245393-76245412 | None:intergenic | 50.0% | |
| ATACCAGTGGATGCACCACT+AGG | + | chr7_3:76245563-76245582 | None:intergenic | 50.0% | |
| GAAGGCTCAGAAGGATCCAT+TGG | + | chr7_3:76246373-76246392 | None:intergenic | 50.0% | |
| CATACCTTGCCGATCAATGC+TGG | + | chr7_3:76246644-76246663 | None:intergenic | 50.0% | |
| GGGTCCTGTTCGTTGCATAA+AGG | + | chr7_3:76246825-76246844 | None:intergenic | 50.0% | |
| TCTCTTGCAGTGTGCAAAGC+TGG | - | chr7_3:76247050-76247069 | Msa1124980:intron | 50.0% | |
| AATATGCTGCACCCACGGAA+TGG | + | chr7_3:76247452-76247471 | None:intergenic | 50.0% | |
| TTGAAAGAGGAGGCTCCAAC+AGG | + | chr7_3:76247669-76247688 | None:intergenic | 50.0% | |
| TGTTGGAGCCTCCTCTTTCA+AGG | - | chr7_3:76247668-76247687 | Msa1124980:CDS | 50.0% | |
| CATGGCTTCCTTGAAAGAGG+AGG | + | chr7_3:76247679-76247698 | None:intergenic | 50.0% | |
| GACTTCCACACCCATCTTCA+TGG | + | chr7_3:76247697-76247716 | None:intergenic | 50.0% | |
| GATGCAAACCGACCTTCAGA+TGG | + | chr7_3:76247725-76247744 | None:intergenic | 50.0% | |
| AAGTCCGCCATTGACAAAGC+TGG | - | chr7_3:76248121-76248140 | Msa1124980:CDS | 50.0% | |
| ! | GGATTTGAGACTTCTGAGCG+GGG | + | chr7_3:76248380-76248399 | None:intergenic | 50.0% |
| CGGTTGAAGAGAAGGGAGTA+AGG | + | chr7_3:76248401-76248420 | None:intergenic | 50.0% | |
| ! | TCAGCACAGGAGGCATAATG+AGG | + | chr7_3:76248482-76248501 | None:intergenic | 50.0% |
| GACGGCTCACAGAAGATATC+TGG | - | chr7_3:76248879-76248898 | Msa1124980:CDS | 50.0% | |
| TCCCAGTCATCCTGGTCAAA+AGG | + | chr7_3:76248969-76248988 | None:intergenic | 50.0% | |
| GCTAAGATGACCGGTGAGAT+TGG | - | chr7_3:76248996-76249015 | Msa1124980:intron | 50.0% | |
| TCTCTTGGTTACCAACCCCA+AGG | - | chr7_3:76249046-76249065 | Msa1124980:intron | 50.0% | |
| GTGTCCACAGAGAGTTCAGA+AGG | - | chr7_3:76249148-76249167 | Msa1124980:CDS | 50.0% | |
| !! | CTGAGAGTATTGAAGCCGTC+AGG | - | chr7_3:76249332-76249351 | Msa1124980:intron | 50.0% |
| AGCCGTCAGGATGTCCAAAA+AGG | - | chr7_3:76249345-76249364 | Msa1124980:intron | 50.0% | |
| GTCAGGATGTCCAAAAAGGC+TGG | - | chr7_3:76249349-76249368 | Msa1124980:intron | 50.0% | |
| GGATGTCCAAAAAGGCTGGA+TGG | - | chr7_3:76249353-76249372 | Msa1124980:intron | 50.0% | |
| TGTTTGCAGTGGAGAGACTG+AGG | - | chr7_3:76249507-76249526 | Msa1124980:intron | 50.0% | |
| CTTCTAGTATGGCTCGACAG+GGG | + | chr7_3:76249881-76249900 | None:intergenic | 50.0% | |
| GCTTCTAGTATGGCTCGACA+GGG | + | chr7_3:76249882-76249901 | None:intergenic | 50.0% | |
| AGCTTCTAGTATGGCTCGAC+AGG | + | chr7_3:76249883-76249902 | None:intergenic | 50.0% | |
| GCAACCGGTGGAGTAAAGTT+TGG | + | chr7_3:76250260-76250279 | None:intergenic | 50.0% | |
| ! | ACTTTACTCCACCGGTTGCT+TGG | - | chr7_3:76250261-76250280 | Msa1124980:CDS | 50.0% |
| ! | CTTTACTCCACCGGTTGCTT+GGG | - | chr7_3:76250262-76250281 | Msa1124980:CDS | 50.0% |
| CAATAAAACCTGAGGCTCGG+TGG | + | chr7_3:76250351-76250370 | None:intergenic | 50.0% | |
| GGGTCTCAGACACCTGCTTA+TGG | + | chr7_3:76245231-76245250 | None:intergenic | 55.0% | |
| TGAAGACGAACCTCGACGGT+AGG | + | chr7_3:76245389-76245408 | None:intergenic | 55.0% | |
| GCTAGAGCTGCTGTTCCTAG+TGG | - | chr7_3:76245545-76245564 | Msa1124980:three_prime_UTR | 55.0% | |
| GTTCCTAGTGGTGCATCCAC+TGG | - | chr7_3:76245557-76245576 | Msa1124980:three_prime_UTR | 55.0% | |
| !! | TGCACCAGCATTGATCGGCA+AGG | - | chr7_3:76246637-76246656 | Msa1124980:intron | 55.0% |
| !! | GGGTGTCGACTATGTTGCTG+CGG | + | chr7_3:76247360-76247379 | None:intergenic | 55.0% |
| GGAAGCCATGAAGATGGGTG+TGG | - | chr7_3:76247689-76247708 | Msa1124980:CDS | 55.0% | |
| ATGTGGATAGACACCAGGGC+TGG | + | chr7_3:76247909-76247928 | None:intergenic | 55.0% | |
| ! | TGGCTTTGCCCCCAACATTC+AGG | - | chr7_3:76248072-76248091 | Msa1124980:intron | 55.0% |
| TCTGAGCGGGGAGATTGGTA+TGG | + | chr7_3:76248368-76248387 | None:intergenic | 55.0% | |
| AGACTTCTGAGCGGGGAGAT+TGG | + | chr7_3:76248373-76248392 | None:intergenic | 55.0% | |
| TCTGTGAGCCGTCGTTGTTC+TGG | + | chr7_3:76248872-76248891 | None:intergenic | 55.0% | |
| CATAGTGCTCCCAGTCATCC+TGG | + | chr7_3:76248977-76248996 | None:intergenic | 55.0% | |
| ! | GACACCCCATCCAGCCTTTT+TGG | + | chr7_3:76249362-76249381 | None:intergenic | 55.0% |
| GTGTCATGACCAGCCACAGA+AGG | - | chr7_3:76249377-76249396 | Msa1124980:intron | 55.0% | |
| ! | TTAAGACCGGAGCACCTTGC+AGG | - | chr7_3:76249671-76249690 | Msa1124980:intron | 55.0% |
| GCGTCTTGCCAAGTACAACC+AGG | - | chr7_3:76249699-76249718 | Msa1124980:intron | 55.0% | |
| ! | GGTGCTGAAGCAGTGTATGC+TGG | - | chr7_3:76249841-76249860 | Msa1124980:intron | 55.0% |
| AGTATGGCTCGACAGGGGTA+CGG | + | chr7_3:76249876-76249895 | None:intergenic | 55.0% | |
| ! | GATCTGACGGGCCTTGATGG+AGG | + | chr7_3:76245348-76245367 | None:intergenic | 60.0% |
| TCGTGGCAATCCTACCGTCG+AGG | - | chr7_3:76245376-76245395 | Msa1124980:three_prime_UTR | 60.0% | |
| TCACGTTGGCAACAGCCTGC+AGG | + | chr7_3:76246607-76246626 | None:intergenic | 60.0% | |
| AGTCTCCTTTGTGCCAGCCC+TGG | - | chr7_3:76247893-76247912 | Msa1124980:intron | 60.0% | |
| ! | AGACACCAGGGCTGGCACAA+AGG | + | chr7_3:76247901-76247920 | None:intergenic | 60.0% |
| ! | CTCTGACCTGCAAGGTGCTC+CGG | + | chr7_3:76249680-76249699 | None:intergenic | 60.0% |
| GCAAGACGCTCTGACCTGCA+AGG | + | chr7_3:76249688-76249707 | None:intergenic | 60.0% | |
| GGGGCTGACAAGTTATCCCC+TGG | - | chr7_3:76250060-76250079 | Msa1124980:intron | 60.0% | |
| ! | ACTCCACCGGTTGCTTGGGT+TGG | - | chr7_3:76250266-76250285 | Msa1124980:CDS | 60.0% |
| TAGCCAACCCAAGCAACCGG+TGG | + | chr7_3:76250272-76250291 | None:intergenic | 60.0% | |
| ACCATCTACCACCGAGCCTC+AGG | - | chr7_3:76250340-76250359 | Msa1124980:intron | 60.0% | |
| !! | ACCTGAGGCTCGGTGGTAGA+TGG | + | chr7_3:76250344-76250363 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 76245193 | 76250611 | 76245193 | ID=Msa1124980;Name=Msa1124980 |
| chr7_3 | mRNA | 76245193 | 76250611 | 76245193 | ID=Msa1124980-mRNA-1;Parent=Msa1124980;Name=Msa1124980-mRNA-1;_AED=0.14;_eAED=0.14;_QI=139|1|1|1|1|1|16|714|444 |
| chr7_3 | exon | 76245193 | 76245987 | 76245193 | ID=Msa1124980-mRNA-1:exon:20752;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76246084 | 76246140 | 76246084 | ID=Msa1124980-mRNA-1:exon:20751;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76246237 | 76246288 | 76246237 | ID=Msa1124980-mRNA-1:exon:20750;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76246406 | 76246494 | 76246406 | ID=Msa1124980-mRNA-1:exon:20749;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76246596 | 76246646 | 76246596 | ID=Msa1124980-mRNA-1:exon:20748;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76246737 | 76246931 | 76246737 | ID=Msa1124980-mRNA-1:exon:20747;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76247472 | 76247549 | 76247472 | ID=Msa1124980-mRNA-1:exon:20746;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76247648 | 76247785 | 76247648 | ID=Msa1124980-mRNA-1:exon:20745;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76248073 | 76248153 | 76248073 | ID=Msa1124980-mRNA-1:exon:20744;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76248237 | 76248338 | 76248237 | ID=Msa1124980-mRNA-1:exon:20743;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76248701 | 76248781 | 76248701 | ID=Msa1124980-mRNA-1:exon:20742;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76248878 | 76248964 | 76248878 | ID=Msa1124980-mRNA-1:exon:20741;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76249146 | 76249193 | 76249146 | ID=Msa1124980-mRNA-1:exon:20740;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76249760 | 76249824 | 76249760 | ID=Msa1124980-mRNA-1:exon:20739;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76250226 | 76250289 | 76250226 | ID=Msa1124980-mRNA-1:exon:20738;Parent=Msa1124980-mRNA-1 |
| chr7_3 | exon | 76250407 | 76250611 | 76250407 | ID=Msa1124980-mRNA-1:exon:20737;Parent=Msa1124980-mRNA-1 |
| chr7_3 | five_prime_UTR | 76250473 | 76250611 | 76250473 | ID=Msa1124980-mRNA-1:five_prime_utr;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76250407 | 76250472 | 76250407 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76250226 | 76250289 | 76250226 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76249760 | 76249824 | 76249760 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76249146 | 76249193 | 76249146 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76248878 | 76248964 | 76248878 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76248701 | 76248781 | 76248701 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76248237 | 76248338 | 76248237 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76248073 | 76248153 | 76248073 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76247648 | 76247785 | 76247648 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76247472 | 76247549 | 76247472 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76246737 | 76246931 | 76246737 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76246596 | 76246646 | 76246596 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76246406 | 76246494 | 76246406 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76246237 | 76246288 | 76246237 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76246084 | 76246140 | 76246084 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | CDS | 76245907 | 76245987 | 76245907 | ID=Msa1124980-mRNA-1:cds;Parent=Msa1124980-mRNA-1 |
| chr7_3 | three_prime_UTR | 76245193 | 76245906 | 76245193 | ID=Msa1124980-mRNA-1:three_prime_utr;Parent=Msa1124980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
