Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0538700 | GAU48083.1 | 76.493 | 268 | 59 | 2 | 128 | 395 | 5 | 268 | 7.12e-133 | 392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0538700 | A0A2Z6P0T0 | 76.493 | 268 | 59 | 2 | 128 | 395 | 5 | 268 | 3.40e-133 | 392 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0538700 | 0.824216 | 9.100137e-54 | -8.615850e-47 |
| Msa0030430 | Msa0538700 | 0.803512 | 3.365528e-49 | -8.615850e-47 |
| Msa0038350 | Msa0538700 | -0.815448 | 9.197332e-52 | -8.615850e-47 |
| Msa0046750 | Msa0538700 | 0.812503 | 4.102296e-51 | -8.615850e-47 |
| Msa0050940 | Msa0538700 | 0.837156 | 6.138512e-57 | -8.615850e-47 |
| Msa0054640 | Msa0538700 | 0.835380 | 1.735677e-56 | -8.615850e-47 |
| Msa0055590 | Msa0538700 | 0.806484 | 8.042394e-50 | -8.615850e-47 |
| Msa0063580 | Msa0538700 | 0.805228 | 1.477202e-49 | -8.615850e-47 |
| Msa0079650 | Msa0538700 | 0.803434 | 3.492582e-49 | -8.615850e-47 |
| Msa0091770 | Msa0538700 | 0.822450 | 2.353022e-53 | -8.615850e-47 |
| Msa0094100 | Msa0538700 | 0.814438 | 1.540658e-51 | -8.615850e-47 |
| Msa0101810 | Msa0538700 | -0.820862 | 5.479792e-53 | -8.615850e-47 |
| Msa0105420 | Msa0538700 | 0.836035 | 1.184418e-56 | -8.615850e-47 |
| Msa0110970 | Msa0538700 | 0.818453 | 1.944587e-52 | -8.615850e-47 |
| Msa0120330 | Msa0538700 | 0.820436 | 6.864547e-53 | -8.615850e-47 |
| Msa0137120 | Msa0538700 | -0.803471 | 3.432232e-49 | -8.615850e-47 |
| Msa0145670 | Msa0538700 | 0.842488 | 2.507839e-58 | -8.615850e-47 |
| Msa0157290 | Msa0538700 | 0.823140 | 1.625817e-53 | -8.615850e-47 |
| Msa0172350 | Msa0538700 | 0.813540 | 2.430849e-51 | -8.615850e-47 |
| Msa0189950 | Msa0538700 | 0.804768 | 1.843038e-49 | -8.615850e-47 |
| Msa0190830 | Msa0538700 | 0.820015 | 8.574969e-53 | -8.615850e-47 |
| Msa0191250 | Msa0538700 | 0.810847 | 9.401334e-51 | -8.615850e-47 |
| Msa0196130 | Msa0538700 | -0.800319 | 1.523627e-48 | -8.615850e-47 |
| Msa0208390 | Msa0538700 | 0.810174 | 1.313866e-50 | -8.615850e-47 |
| Msa0217400 | Msa0538700 | 0.833445 | 5.310925e-56 | -8.615850e-47 |
| Msa0225000 | Msa0538700 | 0.819108 | 1.380868e-52 | -8.615850e-47 |
| Msa0226250 | Msa0538700 | 0.801292 | 9.644739e-49 | -8.615850e-47 |
| Msa0230770 | Msa0538700 | 0.807953 | 3.929082e-50 | -8.615850e-47 |
| Msa0233190 | Msa0538700 | 0.820740 | 5.845966e-53 | -8.615850e-47 |
| Msa0374070 | Msa0538700 | 0.808647 | 2.794773e-50 | -8.615850e-47 |
| Msa0376510 | Msa0538700 | 0.804123 | 2.512038e-49 | -8.615850e-47 |
| Msa0393680 | Msa0538700 | 0.809673 | 1.684239e-50 | -8.615850e-47 |
| Msa0403010 | Msa0538700 | 0.804013 | 2.648401e-49 | -8.615850e-47 |
| Msa0414950 | Msa0538700 | -0.814526 | 1.473038e-51 | -8.615850e-47 |
| Msa0419820 | Msa0538700 | 0.804725 | 1.882165e-49 | -8.615850e-47 |
| Msa0420840 | Msa0538700 | 0.802017 | 6.847488e-49 | -8.615850e-47 |
| Msa0423250 | Msa0538700 | 0.809853 | 1.540550e-50 | -8.615850e-47 |
| Msa0425010 | Msa0538700 | 0.808729 | 2.684442e-50 | -8.615850e-47 |
| Msa0431430 | Msa0538700 | 0.801230 | 9.931731e-49 | -8.615850e-47 |
| Msa0437710 | Msa0538700 | 0.840969 | 6.311525e-58 | -8.615850e-47 |
| Msa0442880 | Msa0538700 | 0.804583 | 2.015343e-49 | -8.615850e-47 |
| Msa0448550 | Msa0538700 | -0.806119 | 9.601629e-50 | -8.615850e-47 |
| Msa0449590 | Msa0538700 | -0.819466 | 1.144650e-52 | -8.615850e-47 |
| Msa0459770 | Msa0538700 | -0.814985 | 1.165842e-51 | -8.615850e-47 |
| Msa0469390 | Msa0538700 | 0.803636 | 3.172209e-49 | -8.615850e-47 |
| Msa0480320 | Msa0538700 | 0.811905 | 5.540370e-51 | -8.615850e-47 |
| Msa0480980 | Msa0538700 | 0.815545 | 8.750138e-52 | -8.615850e-47 |
| Msa0243100 | Msa0538700 | 0.809367 | 1.960123e-50 | -8.615850e-47 |
| Msa0257250 | Msa0538700 | 0.815695 | 8.103605e-52 | -8.615850e-47 |
| Msa0258760 | Msa0538700 | 0.801921 | 7.167169e-49 | -8.615850e-47 |
| Msa0265820 | Msa0538700 | 0.810467 | 1.136101e-50 | -8.615850e-47 |
| Msa0266000 | Msa0538700 | -0.815964 | 7.056495e-52 | -8.615850e-47 |
| Msa0267760 | Msa0538700 | 0.819151 | 1.350228e-52 | -8.615850e-47 |
| Msa0269360 | Msa0538700 | 0.818210 | 2.208025e-52 | -8.615850e-47 |
| Msa0270270 | Msa0538700 | 0.805185 | 1.508384e-49 | -8.615850e-47 |
| Msa0270440 | Msa0538700 | -0.805777 | 1.133389e-49 | -8.615850e-47 |
| Msa0275670 | Msa0538700 | 0.832952 | 7.047110e-56 | -8.615850e-47 |
| Msa0280900 | Msa0538700 | 0.801934 | 7.123046e-49 | -8.615850e-47 |
| Msa0296560 | Msa0538700 | 0.834024 | 3.806647e-56 | -8.615850e-47 |
| Msa0298940 | Msa0538700 | 0.815482 | 9.040199e-52 | -8.615850e-47 |
| Msa0304740 | Msa0538700 | 0.822033 | 2.941493e-53 | -8.615850e-47 |
| Msa0309080 | Msa0538700 | -0.813189 | 2.903767e-51 | -8.615850e-47 |
| Msa0311580 | Msa0538700 | 0.830661 | 2.589981e-55 | -8.615850e-47 |
| Msa0311860 | Msa0538700 | 0.815834 | 7.545126e-52 | -8.615850e-47 |
| Msa0312690 | Msa0538700 | -0.801345 | 9.409448e-49 | -8.615850e-47 |
| Msa0320100 | Msa0538700 | 0.815791 | 7.715450e-52 | -8.615850e-47 |
| Msa0325470 | Msa0538700 | 0.822627 | 2.140889e-53 | -8.615850e-47 |
| Msa0331590 | Msa0538700 | 0.816817 | 4.547567e-52 | -8.615850e-47 |
| Msa0331920 | Msa0538700 | 0.819599 | 1.067090e-52 | -8.615850e-47 |
| Msa0333720 | Msa0538700 | -0.802944 | 4.410968e-49 | -8.615850e-47 |
| Msa0334350 | Msa0538700 | 0.823163 | 1.605616e-53 | -8.615850e-47 |
| Msa0335040 | Msa0538700 | 0.808972 | 2.381502e-50 | -8.615850e-47 |
| Msa0342200 | Msa0538700 | 0.815612 | 8.456964e-52 | -8.615850e-47 |
| Msa0490350 | Msa0538700 | 0.824927 | 6.191173e-54 | -8.615850e-47 |
| Msa0497780 | Msa0538700 | 0.802883 | 4.542069e-49 | -8.615850e-47 |
| Msa0508200 | Msa0538700 | 0.822169 | 2.735661e-53 | -8.615850e-47 |
| Msa0509610 | Msa0538700 | 0.801357 | 9.353736e-49 | -8.615850e-47 |
| Msa0509970 | Msa0538700 | 0.840030 | 1.111005e-57 | -8.615850e-47 |
| Msa0516320 | Msa0538700 | 0.801707 | 7.928907e-49 | -8.615850e-47 |
| Msa0516450 | Msa0538700 | 0.823629 | 1.249548e-53 | -8.615850e-47 |
| Msa0526710 | Msa0538700 | 0.820104 | 8.180219e-53 | -8.615850e-47 |
| Msa0533070 | Msa0538700 | 0.856152 | 3.903447e-62 | -8.615850e-47 |
| Msa0538700 | Msa0540320 | 0.822215 | 2.668612e-53 | -8.615850e-47 |
| Msa0538700 | Msa0548280 | -0.800180 | 1.626773e-48 | -8.615850e-47 |
| Msa0538700 | Msa0566500 | -0.801472 | 8.861501e-49 | -8.615850e-47 |
| Msa0538700 | Msa0567020 | 0.807634 | 4.592194e-50 | -8.615850e-47 |
| Msa0538700 | Msa0581760 | 0.832095 | 1.149441e-55 | -8.615850e-47 |
| Msa0538700 | Msa0582110 | 0.818318 | 2.086420e-52 | -8.615850e-47 |
| Msa0538700 | Msa0596100 | 0.815013 | 1.148714e-51 | -8.615850e-47 |
| Msa0538700 | Msa0604360 | 0.810269 | 1.253553e-50 | -8.615850e-47 |
| Msa0538700 | Msa0607200 | 0.809341 | 1.985119e-50 | -8.615850e-47 |
| Msa0538700 | Msa0614250 | 0.806648 | 7.426704e-50 | -8.615850e-47 |
| Msa0538700 | Msa0621890 | 0.838475 | 2.812515e-57 | -8.615850e-47 |
| Msa0538700 | Msa0624730 | 0.829393 | 5.279660e-55 | -8.615850e-47 |
| Msa0538700 | Msa0638280 | 0.808516 | 2.980613e-50 | -8.615850e-47 |
| Msa0538700 | Msa0638320 | 0.802690 | 4.978101e-49 | -8.615850e-47 |
| Msa0538700 | Msa0647130 | 0.813275 | 2.779201e-51 | -8.615850e-47 |
| Msa0538700 | Msa0657670 | 0.830645 | 2.614003e-55 | -8.615850e-47 |
| Msa0538700 | Msa0657970 | 0.814950 | 1.186398e-51 | -8.615850e-47 |
| Msa0538700 | Msa0658570 | 0.805303 | 1.424687e-49 | -8.615850e-47 |
| Msa0538700 | Msa0662600 | 0.803090 | 4.114623e-49 | -8.615850e-47 |
| Msa0538700 | Msa0668090 | 0.817462 | 3.257625e-52 | -8.615850e-47 |
| Msa0538700 | Msa0674220 | 0.820903 | 5.364038e-53 | -8.615850e-47 |
| Msa0538700 | Msa0696640 | 0.812405 | 4.311430e-51 | -8.615850e-47 |
| Msa0538700 | Msa0697440 | 0.801001 | 1.106058e-48 | -8.615850e-47 |
| Msa0538700 | Msa0703490 | 0.821360 | 4.208687e-53 | -8.615850e-47 |
| Msa0538700 | Msa0710060 | 0.822077 | 2.873418e-53 | -8.615850e-47 |
| Msa0538700 | Msa0710070 | 0.836130 | 1.120939e-56 | -8.615850e-47 |
| Msa0538700 | Msa0719490 | -0.819539 | 1.101565e-52 | -8.615850e-47 |
| Msa0538700 | Msa0725220 | 0.802726 | 4.892516e-49 | -8.615850e-47 |
| Msa0538700 | Msa0756630 | -0.829623 | 4.640725e-55 | -8.615850e-47 |
| Msa0538700 | Msa0770430 | 0.805656 | 1.201613e-49 | -8.615850e-47 |
| Msa0538700 | Msa0782970 | 0.801350 | 9.384319e-49 | -8.615850e-47 |
| Msa0538700 | Msa0789570 | 0.805556 | 1.260873e-49 | -8.615850e-47 |
| Msa0538700 | Msa0792510 | 0.823629 | 1.249756e-53 | -8.615850e-47 |
| Msa0538700 | Msa0802470 | -0.819954 | 8.852449e-53 | -8.615850e-47 |
| Msa0538700 | Msa0829620 | 0.819307 | 1.243900e-52 | -8.615850e-47 |
| Msa0538700 | Msa0837990 | 0.806143 | 9.492637e-50 | -8.615850e-47 |
| Msa0538700 | Msa0844240 | 0.805470 | 1.314398e-49 | -8.615850e-47 |
| Msa0538700 | Msa0845590 | -0.806283 | 8.868825e-50 | -8.615850e-47 |
| Msa0538700 | Msa0853540 | 0.820452 | 6.807539e-53 | -8.615850e-47 |
| Msa0538700 | Msa0867890 | 0.820987 | 5.128745e-53 | -8.615850e-47 |
| Msa0538700 | Msa0871400 | 0.807120 | 5.902552e-50 | -8.615850e-47 |
| Msa0538700 | Msa0880140 | 0.824175 | 9.305436e-54 | -8.615850e-47 |
| Msa0538700 | Msa0891040 | 0.812691 | 3.732830e-51 | -8.615850e-47 |
| Msa0538700 | Msa0894890 | 0.810096 | 1.366212e-50 | -8.615850e-47 |
| Msa0538700 | Msa0909120 | 0.803369 | 3.603286e-49 | -8.615850e-47 |
| Msa0538700 | Msa0936270 | 0.843148 | 1.674359e-58 | -8.615850e-47 |
| Msa0538700 | Msa0937940 | 0.805401 | 1.358960e-49 | -8.615850e-47 |
| Msa0538700 | Msa0946120 | 0.817945 | 2.534176e-52 | -8.615850e-47 |
| Msa0538700 | Msa0954550 | 0.804984 | 1.661263e-49 | -8.615850e-47 |
| Msa0538700 | Msa0969570 | 0.810384 | 1.184174e-50 | -8.615850e-47 |
| Msa0538700 | Msa0977320 | 0.801627 | 8.235457e-49 | -8.615850e-47 |
| Msa0538700 | Msa0978900 | 0.801035 | 1.088767e-48 | -8.615850e-47 |
| Msa0538700 | Msa0980440 | 0.838603 | 2.607425e-57 | -8.615850e-47 |
| Msa0538700 | Msa0990960 | 0.803674 | 3.113999e-49 | -8.615850e-47 |
| Msa0538700 | Msa1008490 | 0.853419 | 2.419200e-61 | -8.615850e-47 |
| Msa0538700 | Msa1009000 | 0.827272 | 1.714711e-54 | -8.615850e-47 |
| Msa0538700 | Msa1014270 | 0.811512 | 6.747636e-51 | -8.615850e-47 |
| Msa0538700 | Msa1020710 | 0.819245 | 1.285245e-52 | -8.615850e-47 |
| Msa0538700 | Msa1033440 | -0.807040 | 6.138169e-50 | -8.615850e-47 |
| Msa0538700 | Msa1036390 | 0.851733 | 7.323523e-61 | -8.615850e-47 |
| Msa0538700 | Msa1038050 | 0.843770 | 1.142512e-58 | -8.615850e-47 |
| Msa0538700 | Msa1040120 | 0.854976 | 8.596114e-62 | -8.615850e-47 |
| Msa0538700 | Msa1040830 | 0.808215 | 3.455522e-50 | -8.615850e-47 |
| Msa0538700 | Msa1055260 | 0.819791 | 9.646433e-53 | -8.615850e-47 |
| Msa0538700 | Msa1055280 | 0.836307 | 1.010408e-56 | -8.615850e-47 |
| Msa0538700 | Msa1055430 | 0.803291 | 3.738497e-49 | -8.615850e-47 |
| Msa0538700 | Msa1073110 | -0.809477 | 1.856125e-50 | -8.615850e-47 |
| Msa0538700 | Msa1076680 | 0.845428 | 4.087155e-59 | -8.615850e-47 |
| Msa0538700 | Msa1082500 | 0.807273 | 5.478208e-50 | -8.615850e-47 |
| Msa0538700 | Msa1083410 | 0.857329 | 1.758293e-62 | -8.615850e-47 |
| Msa0538700 | Msa1085300 | 0.806367 | 8.513390e-50 | -8.615850e-47 |
| Msa0538700 | Msa1092650 | 0.822533 | 2.251900e-53 | -8.615850e-47 |
| Msa0538700 | Msa1098560 | 0.851186 | 1.045792e-60 | -8.615850e-47 |
| Msa0538700 | Msa1099030 | 0.827555 | 1.466403e-54 | -8.615850e-47 |
| Msa0538700 | Msa1124680 | -0.822726 | 2.029872e-53 | -8.615850e-47 |
| Msa0538700 | Msa1128160 | 0.854766 | 9.892915e-62 | -8.615850e-47 |
| Msa0538700 | Msa1165360 | 0.848067 | 7.762644e-60 | -8.615850e-47 |
| Msa0538700 | Msa1171690 | 0.808732 | 2.680580e-50 | -8.615850e-47 |
| Msa0538700 | Msa1193340 | 0.841808 | 3.794725e-58 | -8.615850e-47 |
| Msa0538700 | Msa1201990 | 0.800051 | 1.727689e-48 | -8.615850e-47 |
| Msa0538700 | Msa1204980 | -0.801127 | 1.042683e-48 | -8.615850e-47 |
| Msa0538700 | Msa1205010 | -0.803758 | 2.992306e-49 | -8.615850e-47 |
| Msa0538700 | Msa1214270 | 0.803172 | 3.957258e-49 | -8.615850e-47 |
| Msa0538700 | Msa1220230 | 0.828968 | 6.693056e-55 | -8.615850e-47 |
| Msa0538700 | Msa1221200 | -0.802049 | 6.746995e-49 | -8.615850e-47 |
| Msa0538700 | Msa1221560 | 0.824865 | 6.402298e-54 | -8.615850e-47 |
| Msa0538700 | Msa1222970 | 0.861279 | 1.147215e-63 | -8.615850e-47 |
| Msa0538700 | Msa1222990 | 0.851409 | 9.044060e-61 | -8.615850e-47 |
| Msa0538700 | Msa1228210 | 0.828044 | 1.118610e-54 | -8.615850e-47 |
| Msa0538700 | Msa1238470 | 0.810484 | 1.126604e-50 | -8.615850e-47 |
| Msa0538700 | Msa1238930 | 0.800969 | 1.122769e-48 | -8.615850e-47 |
| Msa0538700 | Msa1239420 | 0.803483 | 3.412065e-49 | -8.615850e-47 |
| Msa0538700 | Msa1242220 | 0.805820 | 1.110012e-49 | -8.615850e-47 |
| Msa0538700 | Msa1242230 | 0.834530 | 2.842566e-56 | -8.615850e-47 |
| Msa0538700 | Msa1242240 | 0.815303 | 9.904386e-52 | -8.615850e-47 |
| Msa0538700 | Msa1254950 | 0.828286 | 9.782393e-55 | -8.615850e-47 |
| Msa0538700 | Msa1256540 | -0.800750 | 1.244757e-48 | -8.615850e-47 |
| Msa0538700 | Msa1264020 | 0.845002 | 5.328846e-59 | -8.615850e-47 |
| Msa0538700 | Msa1265960 | 0.818515 | 1.883376e-52 | -8.615850e-47 |
| Msa0538700 | Msa1270610 | 0.828661 | 7.941583e-55 | -8.615850e-47 |
| Msa0538700 | Msa1270680 | 0.803049 | 4.196361e-49 | -8.615850e-47 |
| Msa0538700 | Msa1271280 | 0.827879 | 1.225775e-54 | -8.615850e-47 |
| Msa0538700 | Msa1271290 | 0.816379 | 5.700500e-52 | -8.615850e-47 |
| Msa0538700 | Msa1271300 | 0.845959 | 2.933723e-59 | -8.615850e-47 |
| Msa0538700 | Msa1283840 | 0.805727 | 1.160934e-49 | -8.615850e-47 |
| Msa0538700 | Msa1283860 | 0.823479 | 1.354756e-53 | -8.615850e-47 |
| Msa0538700 | Msa1295690 | 0.820819 | 5.606420e-53 | -8.615850e-47 |
| Msa0538700 | Msa1296960 | -0.804440 | 2.157736e-49 | -8.615850e-47 |
| Msa0538700 | Msa1302150 | 0.802685 | 4.990252e-49 | -8.615850e-47 |
| Msa0538700 | Msa1319650 | 0.809723 | 1.643524e-50 | -8.615850e-47 |
| Msa0538700 | Msa1322860 | 0.834923 | 2.262903e-56 | -8.615850e-47 |
| Msa0538700 | Msa1322890 | 0.830434 | 2.942555e-55 | -8.615850e-47 |
| Msa0538700 | Msa1323190 | 0.807562 | 4.757511e-50 | -8.615850e-47 |
| Msa0538700 | Msa1324550 | 0.801600 | 8.342280e-49 | -8.615850e-47 |
| Msa0538700 | Msa1327050 | 0.821793 | 3.341669e-53 | -8.615850e-47 |
| Msa0538700 | Msa1329990 | 0.823131 | 1.633472e-53 | -8.615850e-47 |
| Msa0538700 | Msa1335860 | 0.808803 | 2.588027e-50 | -8.615850e-47 |
| Msa0538700 | Msa1347620 | 0.801123 | 1.044416e-48 | -8.615850e-47 |
| Msa0538700 | Msa1350840 | 0.819342 | 1.221185e-52 | -8.615850e-47 |
| Msa0538700 | Msa1353530 | 0.817752 | 2.802292e-52 | -8.615850e-47 |
| Msa0538700 | Msa1357530 | 0.800133 | 1.662665e-48 | -8.615850e-47 |
| Msa0538700 | Msa1358870 | -0.802886 | 4.534238e-49 | -8.615850e-47 |
| Msa0538700 | Msa1365040 | -0.808040 | 3.765282e-50 | -8.615850e-47 |
| Msa0538700 | Msa1367080 | 0.840232 | 9.840797e-58 | -8.615850e-47 |
| Msa0538700 | Msa1373950 | 0.817692 | 2.890345e-52 | -8.615850e-47 |
| Msa0538700 | Msa1376890 | 0.800880 | 1.171120e-48 | -8.615850e-47 |
| Msa0538700 | Msa1378760 | 0.855415 | 6.405039e-62 | -8.615850e-47 |
| Msa0538700 | Msa1384350 | 0.805937 | 1.048951e-49 | -8.615850e-47 |
| Msa0538700 | Msa1385900 | 0.812150 | 4.900175e-51 | -8.615850e-47 |
| Msa0538700 | Msa1398920 | 0.813821 | 2.108302e-51 | -8.615850e-47 |
| Msa0538700 | Msa1411070 | 0.816247 | 6.101706e-52 | -8.615850e-47 |
| Msa0538700 | Msa1414740 | 0.806445 | 8.197472e-50 | -8.615850e-47 |
| Msa0538700 | Msa1424000 | 0.804223 | 2.394862e-49 | -8.615850e-47 |
| Msa0538700 | Msa1427760 | 0.968111 | 3.253761e-128 | -8.615850e-47 |
| Msa0538700 | Msa1427820 | 0.802715 | 4.918942e-49 | -8.615850e-47 |
| Msa0538700 | Msa1431000 | 0.808062 | 3.724776e-50 | -8.615850e-47 |
| Msa0538700 | Msa1438270 | 0.819109 | 1.379957e-52 | -8.615850e-47 |
| Msa0538700 | Msa1447090 | 0.809725 | 1.641443e-50 | -8.615850e-47 |
| Msa0538700 | Msa1454100 | 0.801930 | 7.135790e-49 | -8.615850e-47 |
| Msa0538700 | Msa1456810 | 0.824695 | 7.021989e-54 | -8.615850e-47 |
| Msa0538700 | Msa1457670 | -0.808949 | 2.408334e-50 | -8.615850e-47 |
| Msa0538700 | Msa1464560 | 0.819853 | 9.336722e-53 | -8.615850e-47 |
| Msa0538700 | Msa1465900 | 0.823762 | 1.163414e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0538700 | MtrunA17_Chr4g0039731 | 30.000 | 230 | 149 | 6 | 84 | 310 | 187 | 407 | 2.15e-21 | 96.7 |
| Msa0538700 | MtrunA17_Chr8g0345501 | 29.358 | 218 | 150 | 3 | 81 | 298 | 427 | 640 | 1.39e-20 | 94.0 |
| Msa0538700 | MtrunA17_Chr2g0322881 | 28.173 | 323 | 181 | 13 | 15 | 301 | 261 | 568 | 1.95e-20 | 93.6 |
| Msa0538700 | MtrunA17_Chr7g0231401 | 29.018 | 224 | 147 | 7 | 82 | 301 | 296 | 511 | 5.07e-19 | 89.0 |
| Msa0538700 | MtrunA17_Chr3g0086081 | 31.064 | 235 | 133 | 8 | 82 | 304 | 4 | 221 | 1.30e-18 | 86.3 |
| Msa0538700 | MtrunA17_Chr4g0025081 | 31.098 | 164 | 89 | 5 | 148 | 298 | 321 | 473 | 3.12e-12 | 68.2 |
| Msa0538700 | MtrunA17_Chr1g0176161 | 22.082 | 317 | 217 | 9 | 67 | 362 | 160 | 467 | 1.08e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 93 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTATAATTTGAATATTTAT+TGG | 0.149686 | 4_1:-18233550 | None:intergenic |
| AAATATAGATTTGGATTTAA+TGG | 0.180402 | 4_1:+18233701 | Msa0538700:CDS |
| TATTTCCTCAACACCTAAAA+TGG | 0.217388 | 4_1:-18233874 | None:intergenic |
| GAGAGGTTGAGGCGCGTTTA+AGG | 0.254606 | 4_1:+18233595 | Msa0538700:CDS |
| AATGCAAAGGGTAGAGTATA+TGG | 0.262241 | 4_1:+18233480 | Msa0538700:CDS |
| GTGAACAGGAGGCAACTATT+AGG | 0.318451 | 4_1:+18231809 | Msa0538700:CDS |
| TTAGTTGATTCTTAGATCCT+TGG | 0.322858 | 4_1:-18232032 | None:intergenic |
| TTCATTTGCTTTGAACTAGA+AGG | 0.324162 | 4_1:-18231122 | None:intergenic |
| TTGATGGCCCTTACAACAAT+TGG | 0.340569 | 4_1:+18231625 | Msa0538700:CDS |
| GCAATTAAATCTATCTTTGA+TGG | 0.347315 | 4_1:+18231609 | Msa0538700:CDS |
| TAAACATGCAAATATAGATT+TGG | 0.354681 | 4_1:+18233692 | Msa0538700:CDS |
| ACAAACAATCGATTCCATTA+AGG | 0.358541 | 4_1:+18233638 | Msa0538700:CDS |
| AAAGGTTTGTGACCCCTTCC+TGG | 0.359594 | 4_1:-18232211 | None:intergenic |
| CAACATTTCCAATTGTTGTA+AGG | 0.366988 | 4_1:-18231633 | None:intergenic |
| CACAGCTTCAGTAATCCATT+TGG | 0.367414 | 4_1:-18231908 | None:intergenic |
| CTACAAATGGATTGGTGAAC+AGG | 0.367995 | 4_1:+18231795 | Msa0538700:CDS |
| GTCGGTGATCTCTCTGTTAT+AGG | 0.372867 | 4_1:-18231233 | None:intergenic |
| TAGTTGATTCTTAGATCCTT+GGG | 0.378840 | 4_1:-18232031 | None:intergenic |
| ACTAAAGCATGAACTTGAAT+TGG | 0.381714 | 4_1:+18232050 | Msa0538700:CDS |
| ATTGGTGATGTTGGATATTG+TGG | 0.413918 | 4_1:-18231257 | None:intergenic |
| TAGAGTATATGGGCTTGGTT+TGG | 0.416967 | 4_1:+18233491 | Msa0538700:CDS |
| ACAGCTTCAGTAATCCATTT+GGG | 0.422196 | 4_1:-18231907 | None:intergenic |
| TGAACAGGAGGCAACTATTA+GGG | 0.425593 | 4_1:+18231810 | Msa0538700:CDS |
| GTCTCAGACTCTGTGTCTAT+TGG | 0.428862 | 4_1:-18231275 | None:intergenic |
| GGATCTACTAAGAAAGATAA+TGG | 0.430569 | 4_1:+18231855 | Msa0538700:CDS |
| ATTAGTGTATCATAATCAAT+AGG | 0.448901 | 4_1:-18233435 | None:intergenic |
| CTAAACAAGTGCAGAACAAA+AGG | 0.449735 | 4_1:+18232142 | Msa0538700:intron |
| AAGAAATGTGGTTTAATGAG+TGG | 0.455343 | 4_1:+18231670 | Msa0538700:CDS |
| TGAGTCTCAACCTCATCCTT+TGG | 0.456749 | 4_1:+18233377 | Msa0538700:CDS |
| TATTGATGGTTTATGAATGT+AGG | 0.459697 | 4_1:+18233804 | Msa0538700:three_prime_UTR |
| ATGTGGAAGAATAATATTGA+TGG | 0.474708 | 4_1:+18233790 | Msa0538700:exon |
| GTCTCAACCTCATCCTTTGG+AGG | 0.479026 | 4_1:+18233380 | Msa0538700:CDS |
| GGATTTAGACGTTGAGCCAC+GGG | 0.479351 | 4_1:-18233529 | None:intergenic |
| AACATTTCCAATTGTTGTAA+GGG | 0.485748 | 4_1:-18231632 | None:intergenic |
| TCTTTAGTCTCATTATCATC+AGG | 0.486034 | 4_1:-18231576 | None:intergenic |
| CAACCTCATCCTTTGGAGGC+TGG | 0.487170 | 4_1:+18233384 | Msa0538700:CDS |
| CAAGTGCAGAACAAAAGGTT+AGG | 0.488681 | 4_1:+18232147 | Msa0538700:intron |
| AAGGGTAGAGTATATGGGCT+TGG | 0.493623 | 4_1:+18233486 | Msa0538700:CDS |
| TTGCTTTGAACTAGAAGGAA+TGG | 0.493785 | 4_1:-18231117 | None:intergenic |
| TGTATCATAATCAATAGGCT+TGG | 0.504722 | 4_1:-18233430 | None:intergenic |
| GTATCATAATCAATAGGCTT+GGG | 0.509867 | 4_1:-18233429 | None:intergenic |
| GGCACAACTGCTTGCAATGT+GGG | 0.510450 | 4_1:+18231933 | Msa0538700:CDS |
| ACTTCTAAGAATGCTCATCT+TGG | 0.513983 | 4_1:+18231077 | Msa0538700:CDS |
| TGGTATGAGTGGAGAGGTTG+AGG | 0.514731 | 4_1:+18233584 | Msa0538700:CDS |
| GTATATGGGCTTGGTTTGGA+TGG | 0.514998 | 4_1:+18233495 | Msa0538700:CDS |
| ACACTTGGATTACTTGATGA+TGG | 0.518327 | 4_1:-18231182 | None:intergenic |
| GGAATGGACGGAGTAGGAGC+AGG | 0.520358 | 4_1:-18231101 | None:intergenic |
| TCTGTGTCTATTGGTGATGT+TGG | 0.524681 | 4_1:-18231266 | None:intergenic |
| GATCTCTCTGTTATAGGAGA+TGG | 0.525047 | 4_1:-18231227 | None:intergenic |
| ATGCAAAGGGTAGAGTATAT+GGG | 0.526831 | 4_1:+18233481 | Msa0538700:CDS |
| ACACTAATGATTGAAGCTGT+TGG | 0.537396 | 4_1:+18233450 | Msa0538700:CDS |
| ACTTCTAAGAATGCTCCTCT+TGG | 0.544827 | 4_1:+18231146 | Msa0538700:CDS |
| TTAAACAGTTCTCCCTTGTG+TGG | 0.548626 | 4_1:-18232177 | None:intergenic |
| GATGGCAGCATGCGCACCCG+TGG | 0.550034 | 4_1:+18233513 | Msa0538700:CDS |
| GGATTACTTGATGATGGAGT+AGG | 0.554465 | 4_1:-18231176 | None:intergenic |
| AGAAATGTGGTTTAATGAGT+GGG | 0.554860 | 4_1:+18231671 | Msa0538700:CDS |
| CTAATGATTGAAGCTGTTGG+AGG | 0.555236 | 4_1:+18233453 | Msa0538700:CDS |
| ATTTGCATGTTTAGCAAATG+CGG | 0.555380 | 4_1:-18233682 | None:intergenic |
| TGCAAATGTTGGTGCTGATG+TGG | 0.559498 | 4_1:+18233773 | Msa0538700:CDS |
| TGGATTTAGACGTTGAGCCA+CGG | 0.559998 | 4_1:-18233530 | None:intergenic |
| AGGCAACTATTAGGGCCACA+TGG | 0.561815 | 4_1:+18231818 | Msa0538700:CDS |
| AGTAATCGTGATTCAGATGT+CGG | 0.565082 | 4_1:+18231994 | Msa0538700:CDS |
| CACATGGGAATCAAAAGCTA+AGG | 0.571102 | 4_1:+18231834 | Msa0538700:CDS |
| AGTTGATCTCTTATCAACAA+AGG | 0.578886 | 4_1:-18232229 | None:intergenic |
| ATGATAAAATAAAAGAAATG+TGG | 0.580085 | 4_1:+18231658 | Msa0538700:CDS |
| GGAGGTTCATTGCACACCCA+AGG | 0.595430 | 4_1:+18232015 | Msa0538700:CDS |
| GATGTTGGATATTGTGGAGT+CGG | 0.598629 | 4_1:-18231251 | None:intergenic |
| CTAGAAGGAATGGACGGAGT+AGG | 0.598666 | 4_1:-18231107 | None:intergenic |
| TTACCAGCCTCCAAAGGATG+AGG | 0.600248 | 4_1:-18233387 | None:intergenic |
| GGCAACTATTAGGGCCACAT+GGG | 0.615938 | 4_1:+18231819 | Msa0538700:CDS |
| CGTGGAAGCAATGCAAATGT+TGG | 0.616233 | 4_1:+18233762 | Msa0538700:CDS |
| TCATCATTACCAGCCTCCAA+AGG | 0.621367 | 4_1:-18233393 | None:intergenic |
| TGAGACTAAAGATATATCGA+AGG | 0.629921 | 4_1:+18231587 | Msa0538700:CDS |
| TGTTGGAGGAAGAAATGCAA+AGG | 0.632509 | 4_1:+18233467 | Msa0538700:CDS |
| GATATTGCACGTGGTATGAG+TGG | 0.632896 | 4_1:+18233573 | Msa0538700:CDS |
| ATGGATTACTGAAGCTGTGT+GGG | 0.633622 | 4_1:+18231912 | Msa0538700:CDS |
| TCTGTTGATAATGCTACTCG+TGG | 0.635589 | 4_1:+18233744 | Msa0538700:CDS |
| GTTGGAGGAAGAAATGCAAA+GGG | 0.639504 | 4_1:+18233468 | Msa0538700:CDS |
| CAAATGGATTGGTGAACAGG+AGG | 0.645056 | 4_1:+18231798 | Msa0538700:CDS |
| GGGCACAACTGCTTGCAATG+TGG | 0.649810 | 4_1:+18231932 | Msa0538700:CDS |
| GTTAGGAAGAATTCCACACA+AGG | 0.649819 | 4_1:+18232164 | Msa0538700:CDS |
| TTTGAACTAGAAGGAATGGA+CGG | 0.669438 | 4_1:-18231113 | None:intergenic |
| TTACATTACAAATAGATGTG+TGG | 0.670020 | 4_1:+18231966 | Msa0538700:CDS |
| AATGTGGTTTAATGAGTGGG+CGG | 0.677211 | 4_1:+18231674 | Msa0538700:CDS |
| AATTATACTGATATTGCACG+TGG | 0.677934 | 4_1:+18233564 | Msa0538700:CDS |
| GAAGTACTGAGATGAACACT+TGG | 0.679145 | 4_1:-18231197 | None:intergenic |
| GGAGTAGGAATAGTACCAAG+AGG | 0.690068 | 4_1:-18231161 | None:intergenic |
| AATCGTGATTCAGATGTCGG+AGG | 0.698344 | 4_1:+18231997 | Msa0538700:CDS |
| GCACAACTGCTTGCAATGTG+GGG | 0.699767 | 4_1:+18231934 | Msa0538700:CDS |
| AATGGATTACTGAAGCTGTG+TGG | 0.699938 | 4_1:+18231911 | Msa0538700:CDS |
| TGCACGTGGTATGAGTGGAG+AGG | 0.729243 | 4_1:+18233578 | Msa0538700:CDS |
| GAGGCTGGTAATGATGAGAG+TGG | 0.750491 | 4_1:+18233399 | Msa0538700:CDS |
| TTAGGAAGAATTCCACACAA+GGG | 0.761441 | 4_1:+18232165 | Msa0538700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATATATATTAAATTTT+TGG | + | chr4_1:18234023-18234042 | Msa0538700:three_prime_UTR | 0.0% |
| !!! | TAAATATATATTAAATTTTT+GGG | + | chr4_1:18234024-18234043 | Msa0538700:three_prime_UTR | 0.0% |
| !! | AGTATAATTTGAATATTTAT+TGG | - | chr4_1:18233553-18233572 | None:intergenic | 10.0% |
| !! | ATGATAAAATAAAAGAAATG+TGG | + | chr4_1:18231658-18231677 | Msa0538700:CDS | 15.0% |
| !! | AATAACTGAATAAATAAGAT+AGG | - | chr4_1:18233317-18233336 | None:intergenic | 15.0% |
| !! | AAATATAGATTTGGATTTAA+TGG | + | chr4_1:18233701-18233720 | Msa0538700:CDS | 15.0% |
| !!! | ATTAAAACTTTAACCATTTT+AGG | + | chr4_1:18233861-18233880 | Msa0538700:three_prime_UTR | 15.0% |
| !!! | TTGATAATTGTTGTTATTTT+TGG | + | chr4_1:18233899-18233918 | Msa0538700:three_prime_UTR | 15.0% |
| !! | ATCTTACTGATAACAAAATT+TGG | + | chr4_1:18231411-18231430 | Msa0538700:intron | 20.0% |
| !! | TTTCTGCAATTATTGAAAAT+GGG | - | chr4_1:18231773-18231792 | None:intergenic | 20.0% |
| !!! | TTTTCTGCAATTATTGAAAA+TGG | - | chr4_1:18231774-18231793 | None:intergenic | 20.0% |
| !! | ATGCATATAATATCAACAAT+TGG | + | chr4_1:18232510-18232529 | Msa0538700:intron | 20.0% |
| !! | TGAATATCAATGAAATCAAA+GGG | - | chr4_1:18232818-18232837 | None:intergenic | 20.0% |
| !! | ATGAATATCAATGAAATCAA+AGG | - | chr4_1:18232819-18232838 | None:intergenic | 20.0% |
| !! | TTGTTTGACAGATATATTAT+CGG | + | chr4_1:18233032-18233051 | Msa0538700:intron | 20.0% |
| !! | ATTAGTGTATCATAATCAAT+AGG | - | chr4_1:18233438-18233457 | None:intergenic | 20.0% |
| !! | TAAACATGCAAATATAGATT+TGG | + | chr4_1:18233692-18233711 | Msa0538700:CDS | 20.0% |
| !!! | TAATTGTTGTTATTTTTGGA+TGG | + | chr4_1:18233903-18233922 | Msa0538700:three_prime_UTR | 20.0% |
| ! | TCATTATCTTCTTATGTTTG+TGG | - | chr4_1:18231305-18231324 | None:intergenic | 25.0% |
| ! | ATTTGGACTTATACTCTTAA+AGG | + | chr4_1:18231428-18231447 | Msa0538700:intron | 25.0% |
| ! | GTTAATTCATGTGTTGAATT+TGG | + | chr4_1:18231543-18231562 | Msa0538700:intron | 25.0% |
| ! | GCAATTAAATCTATCTTTGA+TGG | + | chr4_1:18231609-18231628 | Msa0538700:CDS | 25.0% |
| ! | AACATTTCCAATTGTTGTAA+GGG | - | chr4_1:18231635-18231654 | None:intergenic | 25.0% |
| ! | AATTGCAGAAAAACTACAAA+TGG | + | chr4_1:18231782-18231801 | Msa0538700:intron | 25.0% |
| ! | TTACATTACAAATAGATGTG+TGG | + | chr4_1:18231966-18231985 | Msa0538700:CDS | 25.0% |
| !!! | TTGGCTTCTTTAATTTTACT+TGG | + | chr4_1:18232276-18232295 | Msa0538700:intron | 25.0% |
| !! | AGACTAGTACTTTATCTTTT+GGG | + | chr4_1:18232323-18232342 | Msa0538700:intron | 25.0% |
| ! | GACATAAGAATAAAATTGCA+AGG | - | chr4_1:18232721-18232740 | None:intergenic | 25.0% |
| !! | ACTAGTAGACAATATTTTCT+TGG | - | chr4_1:18232784-18232803 | None:intergenic | 25.0% |
| ! | TTAGTGACATATAGTGAAAA+TGG | + | chr4_1:18232838-18232857 | Msa0538700:intron | 25.0% |
| ! | CAAAAACTGAAGTAGATAAA+AGG | - | chr4_1:18233067-18233086 | None:intergenic | 25.0% |
| !! | CTTTTATCTACTTCAGTTTT+TGG | + | chr4_1:18233065-18233084 | Msa0538700:intron | 25.0% |
| !!! | CTTTTTTGTTATTGCAATAC+TGG | + | chr4_1:18233107-18233126 | Msa0538700:intron | 25.0% |
| ! | CATGTATTGCCTTTATAATT+TGG | + | chr4_1:18233214-18233233 | Msa0538700:intron | 25.0% |
| !!! | CCTTTATAATTTGGTTTGTT+GGG | + | chr4_1:18233223-18233242 | Msa0538700:intron | 25.0% |
| ! | ATGTGGAAGAATAATATTGA+TGG | + | chr4_1:18233790-18233809 | Msa0538700:exon | 25.0% |
| !! | TATTGATGGTTTATGAATGT+AGG | + | chr4_1:18233804-18233823 | Msa0538700:three_prime_UTR | 25.0% |
| !! | GAAACAGTTTGATATTTTGT+AGG | + | chr4_1:18233826-18233845 | Msa0538700:three_prime_UTR | 25.0% |
| ! | TTCATTTGCTTTGAACTAGA+AGG | - | chr4_1:18231125-18231144 | None:intergenic | 30.0% |
| !!! | ATGGGATAAAATTTTCAGGT+TGG | - | chr4_1:18231337-18231356 | None:intergenic | 30.0% |
| ! | CCAAATGGGATAAAATTTTC+AGG | - | chr4_1:18231341-18231360 | None:intergenic | 30.0% |
| ! | CCTGAAAATTTTATCCCATT+TGG | + | chr4_1:18231338-18231357 | Msa0538700:intron | 30.0% |
| TCTTTAGTCTCATTATCATC+AGG | - | chr4_1:18231579-18231598 | None:intergenic | 30.0% | |
| TGAGACTAAAGATATATCGA+AGG | + | chr4_1:18231587-18231606 | Msa0538700:CDS | 30.0% | |
| CAACATTTCCAATTGTTGTA+AGG | - | chr4_1:18231636-18231655 | None:intergenic | 30.0% | |
| AAGAAATGTGGTTTAATGAG+TGG | + | chr4_1:18231670-18231689 | Msa0538700:CDS | 30.0% | |
| AGAAATGTGGTTTAATGAGT+GGG | + | chr4_1:18231671-18231690 | Msa0538700:CDS | 30.0% | |
| CAGAAAAACTACAAATGGAT+TGG | + | chr4_1:18231787-18231806 | Msa0538700:intron | 30.0% | |
| GGATCTACTAAGAAAGATAA+TGG | + | chr4_1:18231855-18231874 | Msa0538700:CDS | 30.0% | |
| ! | TAGTTGATTCTTAGATCCTT+GGG | - | chr4_1:18232034-18232053 | None:intergenic | 30.0% |
| ! | TTAGTTGATTCTTAGATCCT+TGG | - | chr4_1:18232035-18232054 | None:intergenic | 30.0% |
| ACTAAAGCATGAACTTGAAT+TGG | + | chr4_1:18232050-18232069 | Msa0538700:CDS | 30.0% | |
| TGTTTAAAAAATGTCACACC+AGG | + | chr4_1:18232193-18232212 | Msa0538700:CDS | 30.0% | |
| AGTTGATCTCTTATCAACAA+AGG | - | chr4_1:18232232-18232251 | None:intergenic | 30.0% | |
| ATATGTGAGTATCAAGCTAT+TGG | + | chr4_1:18232257-18232276 | Msa0538700:intron | 30.0% | |
| !! | TTTACTTGGTTTGTGTAAGT+AGG | + | chr4_1:18232290-18232309 | Msa0538700:intron | 30.0% |
| ! | GAGACTAGTACTTTATCTTT+TGG | + | chr4_1:18232322-18232341 | Msa0538700:intron | 30.0% |
| !! | TTTATCTTTTGGGTCTGTTT+TGG | + | chr4_1:18232333-18232352 | Msa0538700:intron | 30.0% |
| !! | TGAGATTTTGAGTATGAGAA+TGG | - | chr4_1:18232375-18232394 | None:intergenic | 30.0% |
| TTTGCACCAATTGCTATATT+CGG | - | chr4_1:18232403-18232422 | None:intergenic | 30.0% | |
| TATGCATACAAACTCTACTT+TGG | + | chr4_1:18232627-18232646 | Msa0538700:intron | 30.0% | |
| ATAAATCCATCCAAAAGTCA+AGG | - | chr4_1:18232694-18232713 | None:intergenic | 30.0% | |
| ATATACCTCTCAGATTCATT+GGG | - | chr4_1:18232752-18232771 | None:intergenic | 30.0% | |
| ! | ATTGTCTACTAGTGTGTTTT+TGG | + | chr4_1:18232791-18232810 | Msa0538700:intron | 30.0% |
| GAAAAAATTCACAATGCCTA+CGG | + | chr4_1:18232953-18232972 | Msa0538700:intron | 30.0% | |
| AGAAAAAATAAACAGACCGT+AGG | - | chr4_1:18232972-18232991 | None:intergenic | 30.0% | |
| !!! | TTTTGGCTTGCATTTATGTT+TGG | + | chr4_1:18233082-18233101 | Msa0538700:intron | 30.0% |
| !!! | TTTTGTTATTGCAATACTGG+TGG | + | chr4_1:18233110-18233129 | Msa0538700:intron | 30.0% |
| TATGATTCTAGTAATGTCTG+AGG | + | chr4_1:18233146-18233165 | Msa0538700:intron | 30.0% | |
| !! | GCCTTTATAATTTGGTTTGT+TGG | + | chr4_1:18233222-18233241 | Msa0538700:intron | 30.0% |
| CCCAACAAACCAAATTATAA+AGG | - | chr4_1:18233226-18233245 | None:intergenic | 30.0% | |
| TTTGTTGGGATGTTCTATTT+AGG | + | chr4_1:18233237-18233256 | Msa0538700:intron | 30.0% | |
| TTAAGAAGGCAAATTAAGGA+GGG | - | chr4_1:18233277-18233296 | None:intergenic | 30.0% | |
| TTTAAGAAGGCAAATTAAGG+AGG | - | chr4_1:18233278-18233297 | None:intergenic | 30.0% | |
| CAGTTTAAGAAGGCAAATTA+AGG | - | chr4_1:18233281-18233300 | None:intergenic | 30.0% | |
| GTATCATAATCAATAGGCTT+GGG | - | chr4_1:18233432-18233451 | None:intergenic | 30.0% | |
| TGTATCATAATCAATAGGCT+TGG | - | chr4_1:18233433-18233452 | None:intergenic | 30.0% | |
| AATTATACTGATATTGCACG+TGG | + | chr4_1:18233564-18233583 | Msa0538700:CDS | 30.0% | |
| ! | ACAAACAATCGATTCCATTA+AGG | + | chr4_1:18233638-18233657 | Msa0538700:CDS | 30.0% |
| ATTTGCATGTTTAGCAAATG+CGG | - | chr4_1:18233685-18233704 | None:intergenic | 30.0% | |
| !! | TTTAACCATTTTAGGTGTTG+AGG | + | chr4_1:18233869-18233888 | Msa0538700:three_prime_UTR | 30.0% |
| TATTTCCTCAACACCTAAAA+TGG | - | chr4_1:18233877-18233896 | None:intergenic | 30.0% | |
| ! | ACTTCTAAGAATGCTCATCT+TGG | + | chr4_1:18231077-18231096 | Msa0538700:CDS | 35.0% |
| TTTGAACTAGAAGGAATGGA+CGG | - | chr4_1:18231116-18231135 | None:intergenic | 35.0% | |
| ! | TTGCTTTGAACTAGAAGGAA+TGG | - | chr4_1:18231120-18231139 | None:intergenic | 35.0% |
| ACACTTGGATTACTTGATGA+TGG | - | chr4_1:18231185-18231204 | None:intergenic | 35.0% | |
| !! | ATTGGTGATGTTGGATATTG+TGG | - | chr4_1:18231260-18231279 | None:intergenic | 35.0% |
| ATCTTCTTATGTTTGTGGCA+CGG | - | chr4_1:18231300-18231319 | None:intergenic | 35.0% | |
| TCATAATCCACATCTACCAT+GGG | + | chr4_1:18231382-18231401 | Msa0538700:intron | 35.0% | |
| AAGTGTCAGAAAAACCCAAA+TGG | + | chr4_1:18231893-18231912 | Msa0538700:CDS | 35.0% | |
| ACAGCTTCAGTAATCCATTT+GGG | - | chr4_1:18231910-18231929 | None:intergenic | 35.0% | |
| AGTAATCGTGATTCAGATGT+CGG | + | chr4_1:18231994-18232013 | Msa0538700:CDS | 35.0% | |
| CTAAACAAGTGCAGAACAAA+AGG | + | chr4_1:18232142-18232161 | Msa0538700:intron | 35.0% | |
| TTAGGAAGAATTCCACACAA+GGG | + | chr4_1:18232165-18232184 | Msa0538700:CDS | 35.0% | |
| TAAAAAATGTCACACCAGGA+AGG | + | chr4_1:18232197-18232216 | Msa0538700:CDS | 35.0% | |
| AAAAAATGTCACACCAGGAA+GGG | + | chr4_1:18232198-18232217 | Msa0538700:CDS | 35.0% | |
| ACATCTCCGAATATAGCAAT+TGG | + | chr4_1:18232394-18232413 | Msa0538700:intron | 35.0% | |
| GAATATAGCAATTGGTGCAA+AGG | + | chr4_1:18232402-18232421 | Msa0538700:intron | 35.0% | |
| GATGCATACAAACTCTACTT+TGG | + | chr4_1:18232555-18232574 | Msa0538700:intron | 35.0% | |
| ! | TGTCTTTTGTCCTTGACTTT+TGG | + | chr4_1:18232681-18232700 | Msa0538700:intron | 35.0% |
| ! | TTTTGTCCTTGACTTTTGGA+TGG | + | chr4_1:18232685-18232704 | Msa0538700:intron | 35.0% |
| TCAGATTCATTGGGGAAAAA+TGG | - | chr4_1:18232743-18232762 | None:intergenic | 35.0% | |
| TATACCTCTCAGATTCATTG+GGG | - | chr4_1:18232751-18232770 | None:intergenic | 35.0% | |
| GATATACCTCTCAGATTCAT+TGG | - | chr4_1:18232753-18232772 | None:intergenic | 35.0% | |
| AGATATATTATCGGCAACTG+TGG | + | chr4_1:18233041-18233060 | Msa0538700:intron | 35.0% | |
| TTATTGCAATACTGGTGGTT+TGG | + | chr4_1:18233115-18233134 | Msa0538700:intron | 35.0% | |
| !! | GTAATCGAGTGACTTGTTAT+AGG | + | chr4_1:18233188-18233207 | Msa0538700:intron | 35.0% |
| ACAAGCAACACAGTTTAAGA+AGG | - | chr4_1:18233291-18233310 | None:intergenic | 35.0% | |
| ACACTAATGATTGAAGCTGT+TGG | + | chr4_1:18233450-18233469 | Msa0538700:CDS | 35.0% | |
| AATGCAAAGGGTAGAGTATA+TGG | + | chr4_1:18233480-18233499 | Msa0538700:CDS | 35.0% | |
| ATGCAAAGGGTAGAGTATAT+GGG | + | chr4_1:18233481-18233500 | Msa0538700:CDS | 35.0% | |
| !!! | TTTGTTTTGACGAGCCTTAA+TGG | - | chr4_1:18233655-18233674 | None:intergenic | 35.0% |
| ! | ACTTCTAAGAATGCTCCTCT+TGG | + | chr4_1:18231146-18231165 | Msa0538700:CDS | 40.0% |
| !! | GGATTACTTGATGATGGAGT+AGG | - | chr4_1:18231179-18231198 | None:intergenic | 40.0% |
| !! | GAAGTACTGAGATGAACACT+TGG | - | chr4_1:18231200-18231219 | None:intergenic | 40.0% |
| GATCTCTCTGTTATAGGAGA+TGG | - | chr4_1:18231230-18231249 | None:intergenic | 40.0% | |
| GATGTTGGATATTGTGGAGT+CGG | - | chr4_1:18231254-18231273 | None:intergenic | 40.0% | |
| !! | TCTGTGTCTATTGGTGATGT+TGG | - | chr4_1:18231269-18231288 | None:intergenic | 40.0% |
| ! | CATGGTAGATGTGGATTATG+AGG | - | chr4_1:18231383-18231402 | None:intergenic | 40.0% |
| CTCATAATCCACATCTACCA+TGG | + | chr4_1:18231381-18231400 | Msa0538700:intron | 40.0% | |
| CATAATCCACATCTACCATG+GGG | + | chr4_1:18231383-18231402 | Msa0538700:intron | 40.0% | |
| ! | TTGATGGCCCTTACAACAAT+TGG | + | chr4_1:18231625-18231644 | Msa0538700:CDS | 40.0% |
| AATGTGGTTTAATGAGTGGG+CGG | + | chr4_1:18231674-18231693 | Msa0538700:CDS | 40.0% | |
| !! | CTACAAATGGATTGGTGAAC+AGG | + | chr4_1:18231795-18231814 | Msa0538700:CDS | 40.0% |
| TGAACAGGAGGCAACTATTA+GGG | + | chr4_1:18231810-18231829 | Msa0538700:CDS | 40.0% | |
| !! | CTTAGCTTTTGATTCCCATG+TGG | - | chr4_1:18231836-18231855 | None:intergenic | 40.0% |
| CACATGGGAATCAAAAGCTA+AGG | + | chr4_1:18231834-18231853 | Msa0538700:CDS | 40.0% | |
| CACAGCTTCAGTAATCCATT+TGG | - | chr4_1:18231911-18231930 | None:intergenic | 40.0% | |
| !! | AATGGATTACTGAAGCTGTG+TGG | + | chr4_1:18231911-18231930 | Msa0538700:CDS | 40.0% |
| ! | ATGGATTACTGAAGCTGTGT+GGG | + | chr4_1:18231912-18231931 | Msa0538700:CDS | 40.0% |
| CAAGTGCAGAACAAAAGGTT+AGG | + | chr4_1:18232147-18232166 | Msa0538700:intron | 40.0% | |
| GTTAGGAAGAATTCCACACA+AGG | + | chr4_1:18232164-18232183 | Msa0538700:CDS | 40.0% | |
| TTAAACAGTTCTCCCTTGTG+TGG | - | chr4_1:18232180-18232199 | None:intergenic | 40.0% | |
| AAAAATGTCACACCAGGAAG+GGG | + | chr4_1:18232199-18232218 | Msa0538700:CDS | 40.0% | |
| ! | TTTTCCCCAATGAATCTGAG+AGG | + | chr4_1:18232744-18232763 | Msa0538700:intron | 40.0% |
| CTAATGATTGAAGCTGTTGG+AGG | + | chr4_1:18233453-18233472 | Msa0538700:CDS | 40.0% | |
| TGTTGGAGGAAGAAATGCAA+AGG | + | chr4_1:18233467-18233486 | Msa0538700:CDS | 40.0% | |
| GTTGGAGGAAGAAATGCAAA+GGG | + | chr4_1:18233468-18233487 | Msa0538700:CDS | 40.0% | |
| ! | TAGAGTATATGGGCTTGGTT+TGG | + | chr4_1:18233491-18233510 | Msa0538700:CDS | 40.0% |
| !! | TCTGTTGATAATGCTACTCG+TGG | + | chr4_1:18233744-18233763 | Msa0538700:CDS | 40.0% |
| GGAGTAGGAATAGTACCAAG+AGG | - | chr4_1:18231164-18231183 | None:intergenic | 45.0% | |
| GTCGGTGATCTCTCTGTTAT+AGG | - | chr4_1:18231236-18231255 | None:intergenic | 45.0% | |
| GTCTCAGACTCTGTGTCTAT+TGG | - | chr4_1:18231278-18231297 | None:intergenic | 45.0% | |
| GTAAGGTAGGGTCTCCAAAT+GGG | - | chr4_1:18231355-18231374 | None:intergenic | 45.0% | |
| TATGAGGACCAGGTAAGGTA+GGG | - | chr4_1:18231367-18231386 | None:intergenic | 45.0% | |
| TTATGAGGACCAGGTAAGGT+AGG | - | chr4_1:18231368-18231387 | None:intergenic | 45.0% | |
| TGGATTATGAGGACCAGGTA+AGG | - | chr4_1:18231372-18231391 | None:intergenic | 45.0% | |
| ! | AGATGTGGATTATGAGGACC+AGG | - | chr4_1:18231377-18231396 | None:intergenic | 45.0% |
| TCAGTAAGATCTTTGCCCCA+TGG | - | chr4_1:18231401-18231420 | None:intergenic | 45.0% | |
| !! | CAAATGGATTGGTGAACAGG+AGG | + | chr4_1:18231798-18231817 | Msa0538700:CDS | 45.0% |
| GTGAACAGGAGGCAACTATT+AGG | + | chr4_1:18231809-18231828 | Msa0538700:CDS | 45.0% | |
| AATCGTGATTCAGATGTCGG+AGG | + | chr4_1:18231997-18232016 | Msa0538700:CDS | 45.0% | |
| TGAGTCTCAACCTCATCCTT+TGG | + | chr4_1:18233377-18233396 | Msa0538700:CDS | 45.0% | |
| TCATCATTACCAGCCTCCAA+AGG | - | chr4_1:18233396-18233415 | None:intergenic | 45.0% | |
| AAGGGTAGAGTATATGGGCT+TGG | + | chr4_1:18233486-18233505 | Msa0538700:CDS | 45.0% | |
| !! | GTATATGGGCTTGGTTTGGA+TGG | + | chr4_1:18233495-18233514 | Msa0538700:CDS | 45.0% |
| TGGATTTAGACGTTGAGCCA+CGG | - | chr4_1:18233533-18233552 | None:intergenic | 45.0% | |
| GATATTGCACGTGGTATGAG+TGG | + | chr4_1:18233573-18233592 | Msa0538700:CDS | 45.0% | |
| CGTGGAAGCAATGCAAATGT+TGG | + | chr4_1:18233762-18233781 | Msa0538700:CDS | 45.0% | |
| !! | TGCAAATGTTGGTGCTGATG+TGG | + | chr4_1:18233773-18233792 | Msa0538700:CDS | 45.0% |
| CTAGAAGGAATGGACGGAGT+AGG | - | chr4_1:18231110-18231129 | None:intergenic | 50.0% | |
| GGTAAGGTAGGGTCTCCAAA+TGG | - | chr4_1:18231356-18231375 | None:intergenic | 50.0% | |
| TTTGGAGACCCTACCTTACC+TGG | + | chr4_1:18231356-18231375 | Msa0538700:intron | 50.0% | |
| TCTTTGCCCCATGGTAGATG+TGG | - | chr4_1:18231392-18231411 | None:intergenic | 50.0% | |
| AGGCAACTATTAGGGCCACA+TGG | + | chr4_1:18231818-18231837 | Msa0538700:CDS | 50.0% | |
| GGCAACTATTAGGGCCACAT+GGG | + | chr4_1:18231819-18231838 | Msa0538700:CDS | 50.0% | |
| GGCACAACTGCTTGCAATGT+GGG | + | chr4_1:18231933-18231952 | Msa0538700:CDS | 50.0% | |
| GCACAACTGCTTGCAATGTG+GGG | + | chr4_1:18231934-18231953 | Msa0538700:CDS | 50.0% | |
| AAAGGTTTGTGACCCCTTCC+TGG | - | chr4_1:18232214-18232233 | None:intergenic | 50.0% | |
| GTCTCAACCTCATCCTTTGG+AGG | + | chr4_1:18233380-18233399 | Msa0538700:CDS | 50.0% | |
| TTACCAGCCTCCAAAGGATG+AGG | - | chr4_1:18233390-18233409 | None:intergenic | 50.0% | |
| ! | GAGGCTGGTAATGATGAGAG+TGG | + | chr4_1:18233399-18233418 | Msa0538700:CDS | 50.0% |
| GGATTTAGACGTTGAGCCAC+GGG | - | chr4_1:18233532-18233551 | None:intergenic | 50.0% | |
| TGGTATGAGTGGAGAGGTTG+AGG | + | chr4_1:18233584-18233603 | Msa0538700:CDS | 50.0% | |
| GAGTGGGCGGTAATGCATCT+TGG | + | chr4_1:18231687-18231706 | Msa0538700:intron | 55.0% | |
| GGGCACAACTGCTTGCAATG+TGG | + | chr4_1:18231932-18231951 | Msa0538700:CDS | 55.0% | |
| GGAGGTTCATTGCACACCCA+AGG | + | chr4_1:18232015-18232034 | Msa0538700:CDS | 55.0% | |
| ! | CAACCTCATCCTTTGGAGGC+TGG | + | chr4_1:18233384-18233403 | Msa0538700:CDS | 55.0% |
| TGCACGTGGTATGAGTGGAG+AGG | + | chr4_1:18233578-18233597 | Msa0538700:CDS | 55.0% | |
| GAGAGGTTGAGGCGCGTTTA+AGG | + | chr4_1:18233595-18233614 | Msa0538700:CDS | 55.0% | |
| GGAATGGACGGAGTAGGAGC+AGG | - | chr4_1:18231104-18231123 | None:intergenic | 60.0% | |
| GATGGCAGCATGCGCACCCG+TGG | + | chr4_1:18233513-18233532 | Msa0538700:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 18231071 | 18234050 | 18231071 | ID=Msa0538700;Name=Msa0538700 |
| chr4_1 | mRNA | 18231071 | 18234050 | 18231071 | ID=Msa0538700-mRNA-1;Parent=Msa0538700;Name=Msa0538700-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.75|0.8|1|1|1|5|247|395 |
| chr4_1 | exon | 18231071 | 18231288 | 18231071 | ID=Msa0538700-mRNA-1:exon:5397;Parent=Msa0538700-mRNA-1 |
| chr4_1 | exon | 18231569 | 18231695 | 18231569 | ID=Msa0538700-mRNA-1:exon:5398;Parent=Msa0538700-mRNA-1 |
| chr4_1 | exon | 18231790 | 18232071 | 18231790 | ID=Msa0538700-mRNA-1:exon:5399;Parent=Msa0538700-mRNA-1 |
| chr4_1 | exon | 18232156 | 18232260 | 18232156 | ID=Msa0538700-mRNA-1:exon:5400;Parent=Msa0538700-mRNA-1 |
| chr4_1 | exon | 18233348 | 18234050 | 18233348 | ID=Msa0538700-mRNA-1:exon:5401;Parent=Msa0538700-mRNA-1 |
| chr4_1 | CDS | 18231071 | 18231288 | 18231071 | ID=Msa0538700-mRNA-1:cds;Parent=Msa0538700-mRNA-1 |
| chr4_1 | CDS | 18231569 | 18231695 | 18231569 | ID=Msa0538700-mRNA-1:cds;Parent=Msa0538700-mRNA-1 |
| chr4_1 | CDS | 18231790 | 18232071 | 18231790 | ID=Msa0538700-mRNA-1:cds;Parent=Msa0538700-mRNA-1 |
| chr4_1 | CDS | 18232156 | 18232260 | 18232156 | ID=Msa0538700-mRNA-1:cds;Parent=Msa0538700-mRNA-1 |
| chr4_1 | CDS | 18233348 | 18233803 | 18233348 | ID=Msa0538700-mRNA-1:cds;Parent=Msa0538700-mRNA-1 |
| chr4_1 | three_prime_UTR | 18233804 | 18234050 | 18233804 | ID=Msa0538700-mRNA-1:three_prime_utr;Parent=Msa0538700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
