Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414500 | sp|Q9LTB0|EX84B_ARATH | 75.132 | 760 | 179 | 6 | 6 | 764 | 1 | 751 | 0.0 | 1082 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414500 | G7JVK6 | 98.952 | 763 | 8 | 0 | 3 | 765 | 2 | 764 | 0.0 | 1546 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010910 | Msa1414500 | 0.971053 | 1.462847e-132 | -8.615850e-47 |
| Msa0037180 | Msa1414500 | 0.833085 | 6.528380e-56 | -8.615850e-47 |
| Msa0092220 | Msa1414500 | 0.812435 | 4.245116e-51 | -8.615850e-47 |
| Msa1350700 | Msa1414500 | 0.848761 | 4.986835e-60 | -8.615850e-47 |
| Msa1357990 | Msa1414500 | 0.818949 | 1.500759e-52 | -8.615850e-47 |
| Msa1360260 | Msa1414500 | 0.865590 | 5.289409e-65 | -8.615850e-47 |
| Msa1365820 | Msa1414500 | 0.805094 | 1.575760e-49 | -8.615850e-47 |
| Msa1413150 | Msa1414500 | 0.804927 | 1.707811e-49 | -8.615850e-47 |
| Msa1414500 | Msa1429470 | 0.805325 | 1.409753e-49 | -8.615850e-47 |
| Msa0610700 | Msa1414500 | -0.807400 | 5.149114e-50 | -8.615850e-47 |
| Msa0611220 | Msa1414500 | 0.828927 | 6.848800e-55 | -8.615850e-47 |
| Msa0655200 | Msa1414500 | 0.813069 | 3.084697e-51 | -8.615850e-47 |
| Msa0693880 | Msa1414500 | 0.807949 | 3.936361e-50 | -8.615850e-47 |
| Msa0695140 | Msa1414500 | 0.810181 | 1.309646e-50 | -8.615850e-47 |
| Msa0700320 | Msa1414500 | 0.806413 | 8.327696e-50 | -8.615850e-47 |
| Msa0832520 | Msa1414500 | 0.813418 | 2.585233e-51 | -8.615850e-47 |
| Msa0177320 | Msa1414500 | 0.860197 | 2.443822e-63 | -8.615850e-47 |
| Msa0178000 | Msa1414500 | 0.803756 | 2.994414e-49 | -8.615850e-47 |
| Msa0197170 | Msa1414500 | 0.800027 | 1.747079e-48 | -8.615850e-47 |
| Msa1257570 | Msa1414500 | 0.805615 | 1.225258e-49 | -8.615850e-47 |
| Msa1299910 | Msa1414500 | 0.829764 | 4.288040e-55 | -8.615850e-47 |
| Msa0428210 | Msa1414500 | 0.822111 | 2.821816e-53 | -8.615850e-47 |
| Msa1089960 | Msa1414500 | 0.965585 | 8.513171e-125 | -8.615850e-47 |
| Msa0238950 | Msa1414500 | 0.802503 | 5.438584e-49 | -8.615850e-47 |
| Msa0249360 | Msa1414500 | 0.818917 | 1.526298e-52 | -8.615850e-47 |
| Msa0256540 | Msa1414500 | 0.803273 | 3.771497e-49 | -8.615850e-47 |
| Msa0266220 | Msa1414500 | 0.858178 | 9.847823e-63 | -8.615850e-47 |
| Msa0287680 | Msa1414500 | 0.860167 | 2.494519e-63 | -8.615850e-47 |
| Msa0333610 | Msa1414500 | 0.831145 | 1.970926e-55 | -8.615850e-47 |
| Msa0345050 | Msa1414500 | 0.813084 | 3.061242e-51 | -8.615850e-47 |
| Msa1136960 | Msa1414500 | 0.850130 | 2.072147e-60 | -8.615850e-47 |
| Msa1161480 | Msa1414500 | 0.807539 | 4.812171e-50 | -8.615850e-47 |
| Msa1212830 | Msa1414500 | 0.803039 | 4.217047e-49 | -8.615850e-47 |
| Msa0519150 | Msa1414500 | 0.808191 | 3.496329e-50 | -8.615850e-47 |
| Msa0529650 | Msa1414500 | 0.807317 | 5.362360e-50 | -8.615850e-47 |
| Msa0529670 | Msa1414500 | 0.960380 | 1.715700e-118 | -8.615850e-47 |
| Msa0572750 | Msa1414500 | 0.801085 | 1.063289e-48 | -8.615850e-47 |
| Msa0842750 | Msa1414500 | 0.819904 | 9.089210e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414500 | MtrunA17_Chr4g0000541 | 98.952 | 763 | 8 | 0 | 3 | 765 | 2 | 764 | 0.0 | 1546 |
| Msa1414500 | MtrunA17_Chr6g0471001 | 57.278 | 742 | 292 | 11 | 25 | 753 | 31 | 760 | 0.0 | 826 |
| Msa1414500 | MtrunA17_Chr1g0210011 | 57.617 | 663 | 254 | 10 | 88 | 732 | 4 | 657 | 0.0 | 695 |
| Msa1414500 | MtrunA17_Chr4g0043561 | 35.396 | 695 | 425 | 10 | 50 | 731 | 28 | 711 | 2.39e-128 | 400 |
| Msa1414500 | MtrunA17_Chr1g0183451 | 25.470 | 691 | 476 | 14 | 50 | 731 | 61 | 721 | 1.84e-62 | 225 |
| Msa1414500 | MtrunA17_Chr1g0210001 | 59.701 | 67 | 26 | 1 | 22 | 87 | 24 | 90 | 5.44e-18 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414500 | AT5G49830.1 | 75.132 | 760 | 179 | 6 | 6 | 764 | 1 | 751 | 0.0 | 1082 |
| Msa1414500 | AT5G49830.3 | 72.314 | 791 | 178 | 7 | 6 | 764 | 1 | 782 | 0.0 | 1066 |
| Msa1414500 | AT5G49830.2 | 75.978 | 716 | 164 | 5 | 50 | 764 | 105 | 813 | 0.0 | 1030 |
| Msa1414500 | AT1G10385.1 | 61.404 | 741 | 275 | 8 | 22 | 758 | 20 | 753 | 0.0 | 882 |
| Msa1414500 | AT1G10180.1 | 35.423 | 686 | 426 | 8 | 50 | 731 | 28 | 700 | 9.05e-128 | 399 |
Find 172 sgRNAs with CRISPR-Local
Find 572 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAAGCTTTGAGGATTC+TGG | 0.189121 | tig0024129:+38529 | Msa1414500:CDS |
| AACAGAAGCATTTGCTCTTC+TGG | 0.230386 | tig0024129:+37539 | Msa1414500:CDS |
| AGTTGAGTTTCCTGATCTTT+TGG | 0.240158 | tig0024129:+37053 | Msa1414500:CDS |
| AAACATATCTGCTGCTATAT+TGG | 0.247414 | tig0024129:-40080 | None:intergenic |
| CTCTCCCCGTTTATTTCCTT+TGG | 0.259208 | tig0024129:-41736 | None:intergenic |
| CCTTACAGGAATCTTGGTTT+AGG | 0.259751 | tig0024129:-38663 | None:intergenic |
| TCTTCTTCGTCCATTGATTC+TGG | 0.265720 | tig0024129:-38511 | None:intergenic |
| TTTCAGAAGATCAGAGCTTT+TGG | 0.266073 | tig0024129:+40167 | Msa1414500:CDS |
| TCTACGGTTATCATCCTTAC+AGG | 0.270886 | tig0024129:-38677 | None:intergenic |
| ATTGGACTGTACTAATTTAC+AGG | 0.283078 | tig0024129:-41846 | None:intergenic |
| CTCCTCCATTCCCGTTGTTC+AGG | 0.299705 | tig0024129:-38727 | None:intergenic |
| CTTACAGGAATCTTGGTTTA+GGG | 0.300947 | tig0024129:-38662 | None:intergenic |
| TGCCCATCGCTTCAATTTGA+TGG | 0.308622 | tig0024129:+37860 | Msa1414500:CDS |
| CAACATTGAATGAATTGAAT+TGG | 0.310488 | tig0024129:-32754 | None:intergenic |
| TCGCTTCAATTTGATGGTTC+AGG | 0.316321 | tig0024129:+37866 | Msa1414500:CDS |
| CTATGGCTGCTGCTGATGAT+TGG | 0.319105 | tig0024129:+37763 | Msa1414500:CDS |
| GCTAGCTAATGCCTCATTAC+TGG | 0.329413 | tig0024129:+38600 | Msa1414500:CDS |
| TCTCCTTCGTGATCTTGTTA+TGG | 0.329633 | tig0024129:+32848 | Msa1414500:exon |
| GAGGAAGGGCCAAGGCCTTT+AGG | 0.330967 | tig0024129:+40199 | Msa1414500:CDS |
| CCAATCTATCATGAAATTAC+TGG | 0.335302 | tig0024129:+41864 | Msa1414500:three_prime_UTR |
| TCATTAAACCATTCATCTTC+AGG | 0.346274 | tig0024129:-41676 | None:intergenic |
| GCGGCGAGTGTTAAAGAAAA+TGG | 0.352110 | tig0024129:+32915 | Msa1414500:CDS |
| GTTTAGGGAGGAGAGCTTCA+TGG | 0.358778 | tig0024129:-38647 | None:intergenic |
| AGCTGACATGTATATAAGTA+TGG | 0.372642 | tig0024129:+38846 | Msa1414500:CDS |
| TAGCTAGCAGTGCAATCTGC+TGG | 0.380139 | tig0024129:-38585 | None:intergenic |
| TATCATCCTTACAGGAATCT+TGG | 0.382644 | tig0024129:-38669 | None:intergenic |
| AATTGCAAAACATACCTATA+CGG | 0.393334 | tig0024129:-41525 | None:intergenic |
| GAATTGTGAATGAAATTATC+AGG | 0.397966 | tig0024129:+41466 | Msa1414500:CDS |
| CCAGTAATTTCATGATAGAT+TGG | 0.398861 | tig0024129:-41864 | None:intergenic |
| AGTCACGCGCACTGTGTGTT+TGG | 0.404366 | tig0024129:-32706 | None:intergenic |
| CGGCCGTCAAACACCTCATA+TGG | 0.413368 | tig0024129:+37387 | Msa1414500:CDS |
| TACTGCAGCTCTAGCACAAC+TGG | 0.415141 | tig0024129:+37419 | Msa1414500:CDS |
| TATGGCTGCTGCTGATGATT+GGG | 0.419906 | tig0024129:+37764 | Msa1414500:CDS |
| TGTTCAATTTCTAGCTAGAT+TGG | 0.419969 | tig0024129:+32778 | Msa1414500:five_prime_UTR |
| AGGTTGCTTGAGTGGATAGT+AGG | 0.422298 | tig0024129:-36906 | None:intergenic |
| ATGTTAATTAACGCAATAAT+CGG | 0.422821 | tig0024129:-41887 | None:intergenic |
| CCAAGGCCTTTAGGTCCTCT+TGG | 0.424024 | tig0024129:+40208 | Msa1414500:CDS |
| GGAAAACCAAAGGAAATAAA+CGG | 0.424170 | tig0024129:+41730 | Msa1414500:CDS |
| AGTTCAGATCCACGGGTAGA+AGG | 0.425091 | tig0024129:-37258 | None:intergenic |
| AATCTGCTGGGCTTCAGTTT+CGG | 0.426706 | tig0024129:-38572 | None:intergenic |
| TGAAAGCTCACCTTCTAAAT+CGG | 0.432039 | tig0024129:-36872 | None:intergenic |
| GAAAACCAAAGGAAATAAAC+GGG | 0.435327 | tig0024129:+41731 | Msa1414500:CDS |
| GCTTATACAGGACTTCTTTG+AGG | 0.435586 | tig0024129:+38390 | Msa1414500:intron |
| AGCAACCTTGATACATGGTT+TGG | 0.436211 | tig0024129:+36921 | Msa1414500:CDS |
| CATATCCTCCTAATGCTAAT+CGG | 0.438507 | tig0024129:+37793 | Msa1414500:CDS |
| GCCTTTCTGTGGTTCTTCTA+CGG | 0.438652 | tig0024129:-38693 | None:intergenic |
| CATTTGCTCTTCTGGTGAAA+AGG | 0.441118 | tig0024129:+37547 | Msa1414500:CDS |
| CCGGTCTGCCGATTAGCATT+AGG | 0.441791 | tig0024129:-37801 | None:intergenic |
| AAATCGTCATCCTGAACAAC+GGG | 0.443953 | tig0024129:+38717 | Msa1414500:CDS |
| AAGGAGATATCCGATTTAGA+AGG | 0.455997 | tig0024129:+36862 | Msa1414500:CDS |
| AATACCGTCACCGCTTGGTT+AGG | 0.456660 | tig0024129:+32654 | None:intergenic |
| AGGTCCTCTTGGTCTACAAC+AGG | 0.457183 | tig0024129:+40219 | Msa1414500:CDS |
| TGAAATATGTCAAGATGCTA+TGG | 0.457337 | tig0024129:+41696 | Msa1414500:CDS |
| GACTCGTGGGTTCAGTTGAC+AGG | 0.457851 | tig0024129:+38752 | Msa1414500:CDS |
| CACCTCTTCTCTCAATGATA+AGG | 0.462515 | tig0024129:+33007 | Msa1414500:CDS |
| ACAAGCTGCAAGTGACTCAT+TGG | 0.462838 | tig0024129:+37458 | Msa1414500:CDS |
| CCAAGAGGACCTAAAGGCCT+TGG | 0.469828 | tig0024129:-40208 | None:intergenic |
| ATAGCAGCAGATATGTTTGT+AGG | 0.476239 | tig0024129:+40085 | Msa1414500:CDS |
| CAACAGGGATGGATCCGTAT+AGG | 0.477278 | tig0024129:+41511 | Msa1414500:CDS |
| AAATATCAGACCTGGACAAA+TGG | 0.478669 | tig0024129:+37028 | Msa1414500:CDS |
| GATGCTATGGAAAGATTAAG+TGG | 0.486477 | tig0024129:+41709 | Msa1414500:CDS |
| AGCTAGCAGTGCAATCTGCT+GGG | 0.487168 | tig0024129:-38584 | None:intergenic |
| GCTTTGGCCGCTCTTGATGA+AGG | 0.487852 | tig0024129:+37108 | Msa1414500:CDS |
| CAAACGCAAGCCAAATTTGA+CGG | 0.488013 | tig0024129:-42030 | None:intergenic |
| AAAAGCACTACCAGAATCAA+TGG | 0.488194 | tig0024129:+38501 | Msa1414500:CDS |
| CCTCCATATGAGGTGTTTGA+CGG | 0.488508 | tig0024129:-37390 | None:intergenic |
| TTGATACATGGTTTGGCCGA+TGG | 0.489371 | tig0024129:+36928 | Msa1414500:CDS |
| ACCTCTGCTTAGTATGCAGT+TGG | 0.491714 | tig0024129:+38420 | Msa1414500:CDS |
| AGCAGATATGTTTGTAGGGA+GGG | 0.495602 | tig0024129:+40090 | Msa1414500:CDS |
| ACAAGAGAGTACTGCTGCTA+TGG | 0.495618 | tig0024129:+37746 | Msa1414500:CDS |
| TTCTAAATCGGATATCTCCT+TGG | 0.496112 | tig0024129:-36860 | None:intergenic |
| TGCAGAGACAGAAGTAAAGA+TGG | 0.497612 | tig0024129:-37174 | None:intergenic |
| AAGAGAACATCCAAAAGATC+AGG | 0.497714 | tig0024129:-37063 | None:intergenic |
| TTGGCTTCATCAGCAGCTGC+AGG | 0.498943 | tig0024129:+37576 | Msa1414500:CDS |
| GGACGAAGAAGAAAGCTTTG+AGG | 0.502847 | tig0024129:+38522 | Msa1414500:CDS |
| AAGGCGAGTAGAAGAAGCTT+TGG | 0.503692 | tig0024129:+37092 | Msa1414500:CDS |
| AGTATATGCTCCTCCATATG+AGG | 0.506025 | tig0024129:-37400 | None:intergenic |
| TGGATGTTCTCTTGGCTGAA+AGG | 0.507358 | tig0024129:+37073 | Msa1414500:CDS |
| GCAGTTGGGAGGACAAGCTC+TGG | 0.512635 | tig0024129:+38435 | Msa1414500:CDS |
| ATTATTGCGTTAATTAACAT+TGG | 0.513415 | tig0024129:+41890 | Msa1414500:three_prime_UTR |
| TTTCATAAAACTGAACAGAA+TGG | 0.516066 | tig0024129:+40057 | Msa1414500:CDS |
| GACACTTCTGCGCATCTCCT+CGG | 0.517265 | tig0024129:-34713 | None:intergenic |
| GTCATCCTGAACAACGGGAA+TGG | 0.517673 | tig0024129:+38722 | Msa1414500:CDS |
| TCCATAATACCGTCACCGCT+TGG | 0.518500 | tig0024129:+32649 | None:intergenic |
| TTGAAATGCTGTTGTACTAC+CGG | 0.521142 | tig0024129:-37820 | None:intergenic |
| GAAATGCGGATGAAGTTGAA+TGG | 0.522687 | tig0024129:+38872 | Msa1414500:CDS |
| CGATGATGAAGTCATCTTCA+CGG | 0.524587 | tig0024129:+32880 | Msa1414500:CDS |
| GAACCATCAAATTGAAGCGA+TGG | 0.527818 | tig0024129:-37863 | None:intergenic |
| AAACGCAAGCCAAATTTGAC+GGG | 0.528414 | tig0024129:-42029 | None:intergenic |
| GAGTGTGTTCAAATAGCATT+GGG | 0.528713 | tig0024129:+37618 | Msa1414500:CDS |
| TCTGGTGAAAAGGCATGCAT+TGG | 0.529675 | tig0024129:+37557 | Msa1414500:CDS |
| ATGTATCAAGGTTGCTTGAG+TGG | 0.531435 | tig0024129:-36914 | None:intergenic |
| CCTAAACCAAGATTCCTGTA+AGG | 0.532557 | tig0024129:+38663 | Msa1414500:CDS |
| TTCTTCTGAACTTGTGATGT+GGG | 0.533142 | tig0024129:+37506 | Msa1414500:CDS |
| CTAACTATGCAGCCTTCATA+CGG | 0.533378 | tig0024129:+34740 | Msa1414500:CDS |
| TGACAAATACCGACCGTTGG+AGG | 0.534564 | tig0024129:-41430 | None:intergenic |
| AACACAAACTAACCGTATGA+AGG | 0.541012 | tig0024129:-34752 | None:intergenic |
| CAGGACTTCTTTGAGGATGT+AGG | 0.541656 | tig0024129:+38397 | Msa1414500:intron |
| ATTCTTCTGAACTTGTGATG+TGG | 0.543682 | tig0024129:+37505 | Msa1414500:CDS |
| TAGCAGCAGATATGTTTGTA+GGG | 0.544112 | tig0024129:+40086 | Msa1414500:CDS |
| ATCGGCCAAACCATGTATCA+AGG | 0.549441 | tig0024129:-36926 | None:intergenic |
| TCGTGATCTTGTTATGGCGG+CGG | 0.551537 | tig0024129:+32854 | Msa1414500:exon |
| AATGGAGTTAAGCTTGAAGA+AGG | 0.551779 | tig0024129:+32933 | Msa1414500:CDS |
| AGTATAACATGCAAAGTCTC+CGG | 0.553019 | tig0024129:+37367 | Msa1414500:CDS |
| CTTATCATTGAGAGAAGAGG+TGG | 0.553048 | tig0024129:-33006 | None:intergenic |
| ACTCAAGCAACCTTGATACA+TGG | 0.553619 | tig0024129:+36916 | Msa1414500:CDS |
| TAAATGTCATAGAACTTCCA+AGG | 0.554039 | tig0024129:+36843 | Msa1414500:intron |
| AGTGGATAGTAGGTTTCTGA+TGG | 0.555242 | tig0024129:-36896 | None:intergenic |
| TTGGACTGTACTAATTTACA+GGG | 0.560286 | tig0024129:-41845 | None:intergenic |
| GACATGTATATAAGTATGGA+AGG | 0.560326 | tig0024129:+38850 | Msa1414500:CDS |
| ATCTTCACGGTCAAGAGCTA+CGG | 0.560822 | tig0024129:+32893 | Msa1414500:CDS |
| TGGAAACAAAATTGTACGAA+TGG | 0.565828 | tig0024129:+38549 | Msa1414500:CDS |
| CATATGAGGTGTTTGACGGC+CGG | 0.569334 | tig0024129:-37386 | None:intergenic |
| AACCATCAAATTGAAGCGAT+GGG | 0.570523 | tig0024129:-37862 | None:intergenic |
| GGAGTGTGTTCAAATAGCAT+TGG | 0.572465 | tig0024129:+37617 | Msa1414500:CDS |
| TGCACGAAGTTCAGATCCAC+GGG | 0.573946 | tig0024129:-37265 | None:intergenic |
| ATGATATTGAGGAAGGGCCA+AGG | 0.574464 | tig0024129:+40191 | Msa1414500:CDS |
| CCTAATGCTAATCGGCAGAC+CGG | 0.576241 | tig0024129:+37801 | Msa1414500:CDS |
| TTATCGATATCCGATTCTGA+TGG | 0.583099 | tig0024129:+36967 | Msa1414500:CDS |
| TGTAGACCAAGAGGACCTAA+AGG | 0.584749 | tig0024129:-40214 | None:intergenic |
| GAGAGCTTCATGGCTGCGCG+TGG | 0.585405 | tig0024129:-38637 | None:intergenic |
| TCTAATGCTTGTTCAACACT+AGG | 0.587244 | tig0024129:-37705 | None:intergenic |
| TTGGGAGGACAAGCTCTGGA+AGG | 0.588760 | tig0024129:+38439 | Msa1414500:CDS |
| CCTCTGCTTAGTATGCAGTT+GGG | 0.589651 | tig0024129:+38421 | Msa1414500:CDS |
| GTGCAGAGACAGATGCAGTA+GGG | 0.590473 | tig0024129:-41771 | None:intergenic |
| GCTTGTCAGCCTTCTACCCG+TGG | 0.590728 | tig0024129:+37249 | Msa1414500:CDS |
| TGTGAATGAAATTATCAGGA+AGG | 0.593693 | tig0024129:+41470 | Msa1414500:CDS |
| ACAGGAATCTTGGTTTAGGG+AGG | 0.595294 | tig0024129:-38659 | None:intergenic |
| TCAAATCTATCAGACTTGAA+AGG | 0.596208 | tig0024129:-32963 | None:intergenic |
| AAGATTAAGTGGAAAACCAA+AGG | 0.598349 | tig0024129:+41720 | Msa1414500:CDS |
| TTTGGGATGATATTGAGGAA+GGG | 0.600436 | tig0024129:+40185 | Msa1414500:CDS |
| TGGGAGGACAAGCTCTGGAA+GGG | 0.602271 | tig0024129:+38440 | Msa1414500:CDS |
| CCTTGACAAATACCGACCGT+TGG | 0.602728 | tig0024129:-41433 | None:intergenic |
| ACCGTAGAAGAACCACAGAA+AGG | 0.603747 | tig0024129:+38692 | Msa1414500:CDS |
| TGTGCAGAGACAGATGCAGT+AGG | 0.604544 | tig0024129:-41772 | None:intergenic |
| ATCCTGAACAACGGGAATGG+AGG | 0.608982 | tig0024129:+38725 | Msa1414500:CDS |
| TATAAGTATGGAAGGAAATG+CGG | 0.609812 | tig0024129:+38858 | Msa1414500:CDS |
| ATGCACGAAGTTCAGATCCA+CGG | 0.609989 | tig0024129:-37266 | None:intergenic |
| GTCTGCCGATTAGCATTAGG+AGG | 0.611723 | tig0024129:-37798 | None:intergenic |
| GTGATCTGCCTGAAGATGAA+TGG | 0.612166 | tig0024129:+41668 | Msa1414500:intron |
| AAATCAGGCTCAAAGCATGT+TGG | 0.615504 | tig0024129:-38795 | None:intergenic |
| AACCTTATCATTGAGAGAAG+AGG | 0.615582 | tig0024129:-33009 | None:intergenic |
| GGAATGGAGGAGACGACTCG+TGG | 0.616377 | tig0024129:+38738 | Msa1414500:CDS |
| TAGTTCATCAGCCAGTAATG+AGG | 0.617154 | tig0024129:-38611 | None:intergenic |
| GCTTCATCAGCAGCTGCAGG+AGG | 0.617864 | tig0024129:+37579 | Msa1414500:CDS |
| GCAGAGACAGAAGTAAAGAT+GGG | 0.618767 | tig0024129:-37173 | None:intergenic |
| CAGCAGATATGTTTGTAGGG+AGG | 0.620591 | tig0024129:+40089 | Msa1414500:CDS |
| ACTCAACTAACCATTTGTCC+AGG | 0.622338 | tig0024129:-37038 | None:intergenic |
| TGCTCATTATTAGAAGCTCG+TGG | 0.624438 | tig0024129:+37645 | Msa1414500:CDS |
| TGAATCGATGTGAACTCCAT+CGG | 0.624805 | tig0024129:-36944 | None:intergenic |
| CTTGAAAAGAGCTTCTGCCG+AGG | 0.627062 | tig0024129:+34696 | Msa1414500:CDS |
| CCAACGGTCGGTATTTGTCA+AGG | 0.628869 | tig0024129:+41433 | Msa1414500:CDS |
| TAGATTGGCGCGTGTGTGCG+TGG | 0.630527 | tig0024129:+32793 | Msa1414500:five_prime_UTR |
| CCTTCGTGATCTTGTTATGG+CGG | 0.635548 | tig0024129:+32851 | Msa1414500:exon |
| ACATAAAGAAATATCAGACC+TGG | 0.635904 | tig0024129:+37020 | Msa1414500:CDS |
| AGTAGCAAGCTGTGAGCATG+CGG | 0.636005 | tig0024129:-37321 | None:intergenic |
| CCGTCAAACACCTCATATGG+AGG | 0.647577 | tig0024129:+37390 | Msa1414500:CDS |
| CCCAACTGCATACTAAGCAG+AGG | 0.650328 | tig0024129:-38421 | None:intergenic |
| AAAATCGTCATCCTGAACAA+CGG | 0.651815 | tig0024129:+38716 | Msa1414500:CDS |
| AGGAGGTTTAAGAGCTGCTG+CGG | 0.658917 | tig0024129:+37596 | Msa1414500:CDS |
| CATACCTGTTGTAGACCAAG+AGG | 0.660216 | tig0024129:-40223 | None:intergenic |
| GAATGGAGGAGACGACTCGT+GGG | 0.664709 | tig0024129:+38739 | Msa1414500:CDS |
| ACGTTCTCCTTCATCAAGAG+CGG | 0.665530 | tig0024129:-37115 | None:intergenic |
| TTCACGGTCAAGAGCTACGG+CGG | 0.666183 | tig0024129:+32896 | Msa1414500:CDS |
| TCTCTATGATCCTAACCAAG+CGG | 0.691354 | tig0024129:-32664 | None:intergenic |
| ACAAGTTCAGAAGAATACGC+TGG | 0.693012 | tig0024129:-37498 | None:intergenic |
| CTGCTTAGTATGCAGTTGGG+AGG | 0.693555 | tig0024129:+38424 | Msa1414500:CDS |
| GAATTGAATTGAAGAAGACA+CGG | 0.698389 | tig0024129:-32732 | None:intergenic |
| AAAATGAAAGGGGTGCCAAG+GGG | 0.724461 | tig0024129:-41945 | None:intergenic |
| CCGCCATAACAAGATCACGA+AGG | 0.740134 | tig0024129:-32851 | None:intergenic |
| AAAACCAAAGGAAATAAACG+GGG | 0.769107 | tig0024129:+41732 | Msa1414500:CDS |
| AGAATTCTATTACCGAACGT+AGG | 0.770772 | tig0024129:+37196 | Msa1414500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATTT+AGG | + | tig0024129:33241-33260 | Msa1414500:intron | 0.0% |
| !! | TATATATATATATATATATT+AGG | - | tig0024129:33240-33259 | None:intergenic | 0.0% |
| !!! | TTAATATAAATAATTTTAAA+TGG | - | tig0024129:40908-40927 | None:intergenic | 0.0% |
| !!! | TATTTTTCTCAAATTATTAT+CGG | + | tig0024129:33904-33923 | Msa1414500:intron | 10.0% |
| !!! | TCTTATTTATATATTATCAT+CGG | - | tig0024129:35002-35021 | None:intergenic | 10.0% |
| !!! | AATTCATTTTATTAAATTAG+GGG | - | tig0024129:35105-35124 | None:intergenic | 10.0% |
| !!! | CAATTCATTTTATTAAATTA+GGG | - | tig0024129:35106-35125 | None:intergenic | 10.0% |
| !!! | TCAATTCATTTTATTAAATT+AGG | - | tig0024129:35107-35126 | None:intergenic | 10.0% |
| !!! | AAAAAAAATCATTTTTGAAA+TGG | - | tig0024129:35473-35492 | None:intergenic | 10.0% |
| !! | TTAAGCTAAATAAATTAAAA+TGG | - | tig0024129:36782-36801 | None:intergenic | 10.0% |
| !! | TAAATATTATAACAAATACA+AGG | - | tig0024129:41205-41224 | None:intergenic | 10.0% |
| !! | AACGTTAAAAAAAAATTATA+TGG | - | tig0024129:41370-41389 | None:intergenic | 10.0% |
| !! | TATATATATAATTAAGCTTC+TGG | - | tig0024129:33214-33233 | None:intergenic | 15.0% |
| !! | TTTATAAGTTCAAAAAACTT+AGG | + | tig0024129:33644-33663 | Msa1414500:intron | 15.0% |
| !! | TGTATGCTATATTATTTATA+GGG | - | tig0024129:35041-35060 | None:intergenic | 15.0% |
| !! | ATGTATGCTATATTATTTAT+AGG | - | tig0024129:35042-35061 | None:intergenic | 15.0% |
| !!! | GATATTTTAAAACATATACT+AGG | + | tig0024129:35237-35256 | Msa1414500:intron | 15.0% |
| !!! | TTTTGTTAATATATCTATCT+AGG | - | tig0024129:35300-35319 | None:intergenic | 15.0% |
| !! | TTAAATTGTAAGCAATTTAA+TGG | - | tig0024129:35584-35603 | None:intergenic | 15.0% |
| !!! | AAATTTTCAAAAGGAAATAT+TGG | - | tig0024129:35922-35941 | None:intergenic | 15.0% |
| !!! | TTTTGAAAATTTTCAGAATT+CGG | + | tig0024129:35930-35949 | Msa1414500:intron | 15.0% |
| !!! | TGTTGATTTTTAAAAATTAC+AGG | + | tig0024129:39179-39198 | Msa1414500:intron | 15.0% |
| !!! | TTTTTAAAAATTACAGGATT+AGG | + | tig0024129:39185-39204 | Msa1414500:intron | 15.0% |
| !! | TCTACAATTAGAAATATATA+TGG | - | tig0024129:39232-39251 | None:intergenic | 15.0% |
| !! | ATATAATAAACCACAAAAAT+TGG | - | tig0024129:39344-39363 | None:intergenic | 15.0% |
| !! | TAAGTTATTAAGATATTCAA+AGG | - | tig0024129:39888-39907 | None:intergenic | 15.0% |
| !! | TTGAATATCTTAATAACTTA+TGG | + | tig0024129:39888-39907 | Msa1414500:intron | 15.0% |
| !!! | CAAATTGGATAATTTTATTT+GGG | + | tig0024129:40344-40363 | Msa1414500:intron | 15.0% |
| !!! | TTTGTCTTTATTCATTTTAA+TGG | + | tig0024129:41966-41985 | Msa1414500:three_prime_UTR | 15.0% |
| !!! | TTGTCTTTATTCATTTTAAT+GGG | + | tig0024129:41967-41986 | Msa1414500:three_prime_UTR | 15.0% |
| !! | AATTATGAAGTAAGTAATCA+TGG | - | tig0024129:33119-33138 | None:intergenic | 20.0% |
| !! | TATATATATTTAGGTCTGTT+TGG | + | tig0024129:33250-33269 | Msa1414500:intron | 20.0% |
| !! | GAGAAAAATAACATAATTGA+AGG | - | tig0024129:33894-33913 | None:intergenic | 20.0% |
| !!! | CTTTACTAGTTTATAGTTTA+AGG | - | tig0024129:34801-34820 | None:intergenic | 20.0% |
| !! | ATACAATAATTTAACACAGA+TGG | + | tig0024129:35132-35151 | Msa1414500:intron | 20.0% |
| !! | TACAATAATTTAACACAGAT+GGG | + | tig0024129:35133-35152 | Msa1414500:intron | 20.0% |
| !! | CAAAAAATACTTGTATCATA+AGG | + | tig0024129:35419-35438 | Msa1414500:intron | 20.0% |
| !!! | GAATTCTGAAAATTTTCAAA+AGG | - | tig0024129:35931-35950 | None:intergenic | 20.0% |
| !! | TATTTATTTGATGAAACATG+AGG | - | tig0024129:36537-36556 | None:intergenic | 20.0% |
| !! | AAGGATAAATAAAAAGAACA+AGG | - | tig0024129:36693-36712 | None:intergenic | 20.0% |
| !!! | GGTAACTGTTTTTTTTTTAA+TGG | - | tig0024129:38019-38038 | None:intergenic | 20.0% |
| !! | AGAAAAAAATCATAGACTAA+AGG | - | tig0024129:38141-38160 | None:intergenic | 20.0% |
| !! | GACAAAATAAAAAGATGAAA+AGG | - | tig0024129:38181-38200 | None:intergenic | 20.0% |
| !!! | TTTTTGGAAATTTGTGAAAT+TGG | + | tig0024129:39285-39304 | Msa1414500:intron | 20.0% |
| !!! | ATTTGTGAAATTGGTAATTA+AGG | + | tig0024129:39294-39313 | Msa1414500:intron | 20.0% |
| !! | CAAAAGAAATATTACTCATT+GGG | + | tig0024129:39504-39523 | Msa1414500:intron | 20.0% |
| !! | TAAAACATAGTTAGCATTTA+TGG | - | tig0024129:39831-39850 | None:intergenic | 20.0% |
| !!! | AAACAATTTTCAGTTAGTTT+TGG | + | tig0024129:40272-40291 | Msa1414500:intron | 20.0% |
| !!! | ATTATCCAATTTGCTTATAA+AGG | - | tig0024129:40337-40356 | None:intergenic | 20.0% |
| !!! | GCAAATTGGATAATTTTATT+TGG | + | tig0024129:40343-40362 | Msa1414500:intron | 20.0% |
| !! | AAGAACTCAAGTTTATTATT+GGG | - | tig0024129:40598-40617 | None:intergenic | 20.0% |
| !!! | CAATTACATGTTTTAATCAA+AGG | + | tig0024129:40728-40747 | Msa1414500:intron | 20.0% |
| !! | AGTATCAATTTAAGAAATCA+AGG | - | tig0024129:40766-40785 | None:intergenic | 20.0% |
| !! | TCTTATTACATTAGCTATAA+TGG | + | tig0024129:40794-40813 | Msa1414500:intron | 20.0% |
| !! | CTTATTACATTAGCTATAAT+GGG | + | tig0024129:40795-40814 | Msa1414500:intron | 20.0% |
| !!! | ACAAATTTTCTTATAAGTTG+TGG | - | tig0024129:41182-41201 | None:intergenic | 20.0% |
| !! | ATGTTAATTAACGCAATAAT+CGG | - | tig0024129:41890-41909 | None:intergenic | 20.0% |
| !! | ATTATTGCGTTAATTAACAT+TGG | + | tig0024129:41890-41909 | Msa1414500:three_prime_UTR | 20.0% |
| !! | AATAAAGACAAAAATGAAAG+GGG | - | tig0024129:41958-41977 | None:intergenic | 20.0% |
| !! | GAATAAAGACAAAAATGAAA+GGG | - | tig0024129:41959-41978 | None:intergenic | 20.0% |
| !! | TGAATAAAGACAAAAATGAA+AGG | - | tig0024129:41960-41979 | None:intergenic | 20.0% |
| !!! | TGTCTTTATTCATTTTAATG+GGG | + | tig0024129:41968-41987 | Msa1414500:three_prime_UTR | 20.0% |
| ! | CAACATTGAATGAATTGAAT+TGG | - | tig0024129:32757-32776 | None:intergenic | 25.0% |
| ! | AAAATTGAAAACCTGATGAA+TGG | - | tig0024129:33080-33099 | None:intergenic | 25.0% |
| ! | TTATGTAGTTGATTAATCGA+AGG | + | tig0024129:33151-33170 | Msa1414500:intron | 25.0% |
| ! | CGTTTAATATGCTTATGTAT+AGG | + | tig0024129:33308-33327 | Msa1414500:intron | 25.0% |
| !!! | GTTGTTTTCATAAGCTATTT+TGG | + | tig0024129:33392-33411 | Msa1414500:intron | 25.0% |
| !!! | ATTCTCAGCTTATTTTGATA+AGG | - | tig0024129:33421-33440 | None:intergenic | 25.0% |
| ! | TATCAAAATAAGCTGAGAAT+AGG | + | tig0024129:33421-33440 | Msa1414500:intron | 25.0% |
| ! | TAAGTTCAAAAAACTTAGGT+TGG | + | tig0024129:33648-33667 | Msa1414500:intron | 25.0% |
| !! | ATTAGCATAACTTTTGTGAT+GGG | - | tig0024129:33739-33758 | None:intergenic | 25.0% |
| !! | TATTAGCATAACTTTTGTGA+TGG | - | tig0024129:33740-33759 | None:intergenic | 25.0% |
| ! | ATGAAATGAAGTTATCTATG+AGG | - | tig0024129:33952-33971 | None:intergenic | 25.0% |
| ! | CTCTTAAATTCTTCACTTAT+TGG | - | tig0024129:34012-34031 | None:intergenic | 25.0% |
| ! | GCATCACAATTGATATATAA+AGG | - | tig0024129:34095-34114 | None:intergenic | 25.0% |
| ! | AAAATTGTGACTAAAAGGAA+TGG | - | tig0024129:34481-34500 | None:intergenic | 25.0% |
| ! | GAAACAAAATTGTGACTAAA+AGG | - | tig0024129:34486-34505 | None:intergenic | 25.0% |
| ! | TAATGGTAAAACCTATTTGT+TGG | + | tig0024129:34526-34545 | Msa1414500:intron | 25.0% |
| ! | AATGGTAAAACCTATTTGTT+GGG | + | tig0024129:34527-34546 | Msa1414500:intron | 25.0% |
| ! | CTATAAACTAGTAAAGAAAG+TGG | + | tig0024129:34805-34824 | Msa1414500:intron | 25.0% |
| ! | ATACTTGTATCATAAGGAAA+AGG | + | tig0024129:35425-35444 | Msa1414500:intron | 25.0% |
| ! | ACATTTGTAAAAAGTTCACA+AGG | - | tig0024129:35498-35517 | None:intergenic | 25.0% |
| !! | TGACATATTGTCGTTTATTA+GGG | - | tig0024129:35528-35547 | None:intergenic | 25.0% |
| ! | AATTGTAAGCAATTTAATGG+AGG | - | tig0024129:35581-35600 | None:intergenic | 25.0% |
| ! | TCCATCTATAAATCATCAAT+AGG | + | tig0024129:35665-35684 | Msa1414500:intron | 25.0% |
| !! | CAAAAATCAAAGCAAGTTTT+TGG | + | tig0024129:35853-35872 | Msa1414500:intron | 25.0% |
| ! | TCTGCATTTAAATTTCTGTA+TGG | + | tig0024129:36251-36270 | Msa1414500:intron | 25.0% |
| ! | AAATTTCTGTATGGTAGATT+TGG | + | tig0024129:36260-36279 | Msa1414500:intron | 25.0% |
| !!! | TCTTTGCTTAAGTATTTTGA+GGG | + | tig0024129:36404-36423 | Msa1414500:intron | 25.0% |
| ! | GATGCTTCATAAATTCTAAA+AGG | + | tig0024129:36491-36510 | Msa1414500:intron | 25.0% |
| ! | ATCAGTATATGATTTGACAA+AGG | + | tig0024129:36561-36580 | Msa1414500:intron | 25.0% |
| ! | TCAGTATATGATTTGACAAA+GGG | + | tig0024129:36562-36581 | Msa1414500:intron | 25.0% |
| !! | CTAAAAAGTTTCAAAAGTAC+AGG | - | tig0024129:37684-37703 | None:intergenic | 25.0% |
| ! | TTATGACATAGAATGATGTT+TGG | + | tig0024129:37919-37938 | Msa1414500:intron | 25.0% |
| ! | TATGACATAGAATGATGTTT+GGG | + | tig0024129:37920-37939 | Msa1414500:intron | 25.0% |
| ! | AAAATTCACATTGCAAATCA+AGG | - | tig0024129:38040-38059 | None:intergenic | 25.0% |
| ! | TAATTGTGTGAAAAAACAGA+TGG | + | tig0024129:38084-38103 | Msa1414500:intron | 25.0% |
| ! | AAAAAATCATAGACTAAAGG+TGG | - | tig0024129:38138-38157 | None:intergenic | 25.0% |
| !!! | CAGCTGCATTATTTTAATAT+TGG | + | tig0024129:38278-38297 | Msa1414500:intron | 25.0% |
| ! | AAAAACCACAAACTACATAA+GGG | - | tig0024129:38335-38354 | None:intergenic | 25.0% |
| ! | AAAAAACCACAAACTACATA+AGG | - | tig0024129:38336-38355 | None:intergenic | 25.0% |
| !!! | GGTATTTTTTATGCTTATAC+AGG | + | tig0024129:38378-38397 | Msa1414500:intron | 25.0% |
| ! | TATACCTGAAAAATCAAAGA+CGG | - | tig0024129:38901-38920 | None:intergenic | 25.0% |
| !!! | CTTTGATTTTTCAGGTATAA+TGG | + | tig0024129:38902-38921 | Msa1414500:intron | 25.0% |
| !! | AAGTGTTAAATTTAAAACCC+AGG | - | tig0024129:38930-38949 | None:intergenic | 25.0% |
| !! | AAATCTTCAAAACTGATTCA+TGG | - | tig0024129:38953-38972 | None:intergenic | 25.0% |
| !! | TATTTCTTTTGGTAGATGAA+TGG | - | tig0024129:39495-39514 | None:intergenic | 25.0% |
| !! | CCAATGAGTAATATTTCTTT+TGG | - | tig0024129:39506-39525 | None:intergenic | 25.0% |
| ! | CCAAAAGAAATATTACTCAT+TGG | + | tig0024129:39503-39522 | Msa1414500:intron | 25.0% |
| ! | CAATTTATTATTTCCTTCTG+TGG | - | tig0024129:39549-39568 | None:intergenic | 25.0% |
| !! | TTTTTGTTGAGTTTTACATG+CGG | + | tig0024129:39632-39651 | Msa1414500:intron | 25.0% |
| !! | TTAAACTCTGCATTTTATCA+AGG | - | tig0024129:39699-39718 | None:intergenic | 25.0% |
| !!! | ACAACTTTTTTACATCTTAG+TGG | + | tig0024129:39750-39769 | Msa1414500:intron | 25.0% |
| !!! | CAACTTTTTTACATCTTAGT+GGG | + | tig0024129:39751-39770 | Msa1414500:intron | 25.0% |
| ! | TAATAACTTATGGAACATGT+TGG | + | tig0024129:39898-39917 | Msa1414500:intron | 25.0% |
| ! | TTTCATAAAACTGAACAGAA+TGG | + | tig0024129:40057-40076 | Msa1414500:CDS | 25.0% |
| !!! | TTACAGAAACTGTTATTTTG+TGG | + | tig0024129:40143-40162 | Msa1414500:CDS | 25.0% |
| ! | ATGCAATTGAAATTTGATCA+TGG | + | tig0024129:40243-40262 | Msa1414500:intron | 25.0% |
| ! | TGATTCCTTTATAAGCAAAT+TGG | + | tig0024129:40329-40348 | Msa1414500:intron | 25.0% |
| ! | TATTATTCTGTTTAAACCAC+TGG | - | tig0024129:40440-40459 | None:intergenic | 25.0% |
| ! | TATTTACATGCCTTAAACTT+TGG | - | tig0024129:40542-40561 | None:intergenic | 25.0% |
| ! | CAAGAACTCAAGTTTATTAT+TGG | - | tig0024129:40599-40618 | None:intergenic | 25.0% |
| ! | ATTAAAACATGTAATTGACG+AGG | - | tig0024129:40725-40744 | None:intergenic | 25.0% |
| ! | TCAATTTAAGAAATCAAGGA+TGG | - | tig0024129:40762-40781 | None:intergenic | 25.0% |
| ! | GAATTGTGAATGAAATTATC+AGG | + | tig0024129:41466-41485 | Msa1414500:CDS | 25.0% |
| ! | AATTGCAAAACATACCTATA+CGG | - | tig0024129:41528-41547 | None:intergenic | 25.0% |
| !!! | GTCTTTATTCATTTTAATGG+GGG | + | tig0024129:41969-41988 | Msa1414500:three_prime_UTR | 25.0% |
| GAATTGAATTGAAGAAGACA+CGG | - | tig0024129:32735-32754 | None:intergenic | 30.0% | |
| !! | TGTTCAATTTCTAGCTAGAT+TGG | + | tig0024129:32778-32797 | Msa1414500:five_prime_UTR | 30.0% |
| TCAAATCTATCAGACTTGAA+AGG | - | tig0024129:32966-32985 | None:intergenic | 30.0% | |
| TGAGAATAGGTTAGAAACAA+CGG | + | tig0024129:33434-33453 | Msa1414500:intron | 30.0% | |
| TGAAAACAACTTATGACACT+GGG | - | tig0024129:33708-33727 | None:intergenic | 30.0% | |
| ATGAAAACAACTTATGACAC+TGG | - | tig0024129:33709-33728 | None:intergenic | 30.0% | |
| TTATACATGTGACACATGTT+TGG | - | tig0024129:33784-33803 | None:intergenic | 30.0% | |
| ! | ATACCAACATTTTCTATCGA+AGG | + | tig0024129:33803-33822 | Msa1414500:intron | 30.0% |
| AAATTCTTCACTTATTGGAG+TGG | - | tig0024129:34007-34026 | None:intergenic | 30.0% | |
| ATAGTTTCTTGTTGCTAACA+AGG | + | tig0024129:34046-34065 | Msa1414500:intron | 30.0% | |
| ATGAATAACATGATTGACAG+AGG | - | tig0024129:34218-34237 | None:intergenic | 30.0% | |
| !! | TTGTTTCTAGTTCGTATACT+TGG | + | tig0024129:34256-34275 | Msa1414500:intron | 30.0% |
| AACCATGTAGATCATAATAG+AGG | - | tig0024129:34318-34337 | None:intergenic | 30.0% | |
| TTATCTGCTATCTAGCATAA+AGG | - | tig0024129:34350-34369 | None:intergenic | 30.0% | |
| ! | ATAATCTAAGACTTGTGTTG+AGG | + | tig0024129:34366-34385 | Msa1414500:intron | 30.0% |
| TAGATACTTAGACGACTAAA+TGG | - | tig0024129:34508-34527 | None:intergenic | 30.0% | |
| TTAGTCGTCTAAGTATCTAA+TGG | + | tig0024129:34509-34528 | Msa1414500:intron | 30.0% | |
| ATAAGACATACCCAACAAAT+AGG | - | tig0024129:34540-34559 | None:intergenic | 30.0% | |
| CATAATTGCTTAATTTCCTG+GGG | - | tig0024129:34661-34680 | None:intergenic | 30.0% | |
| GCATAATTGCTTAATTTCCT+GGG | - | tig0024129:34662-34681 | None:intergenic | 30.0% | |
| TGCATAATTGCTTAATTTCC+TGG | - | tig0024129:34663-34682 | None:intergenic | 30.0% | |
| TGTTGTTGTATCAACTATCT+AGG | - | tig0024129:35215-35234 | None:intergenic | 30.0% | |
| ! | AGATAGTTGATACAACAACA+CGG | + | tig0024129:35215-35234 | Msa1414500:intron | 30.0% |
| ! | GACATATTGTCGTTTATTAG+GGG | - | tig0024129:35527-35546 | None:intergenic | 30.0% |
| ! | GTGACATATTGTCGTTTATT+AGG | - | tig0024129:35529-35548 | None:intergenic | 30.0% |
| ATTTAACGTCTAACACTAAC+TGG | + | tig0024129:35598-35617 | Msa1414500:intron | 30.0% | |
| ! | GCCTATTGATGATTTATAGA+TGG | - | tig0024129:35669-35688 | None:intergenic | 30.0% |
| ACTCTACCAATTCAAAAAGT+TGG | + | tig0024129:35690-35709 | Msa1414500:intron | 30.0% | |
| ! | TAGTGACCAACTTTTTGAAT+TGG | - | tig0024129:35699-35718 | None:intergenic | 30.0% |
| GTGCATGAAAAATTTGATGA+TGG | - | tig0024129:35722-35741 | None:intergenic | 30.0% | |
| ! | TGAAAATTTTCAGAATTCGG+AGG | + | tig0024129:35933-35952 | Msa1414500:intron | 30.0% |
| ! | TATCGATTGGTATTGTATAC+AGG | - | tig0024129:35992-36011 | None:intergenic | 30.0% |
| !! | ACTAGTTTCACATAGAGTTT+TGG | - | tig0024129:36197-36216 | None:intergenic | 30.0% |
| AAAACTCTATGTGAAACTAG+TGG | + | tig0024129:36196-36215 | Msa1414500:intron | 30.0% | |
| TAAATGCAGAAAAGCTTGAA+GGG | - | tig0024129:36241-36260 | None:intergenic | 30.0% | |
| TTAAATGCAGAAAAGCTTGA+AGG | - | tig0024129:36242-36261 | None:intergenic | 30.0% | |
| ACAAAACACCAATTGTCTAA+TGG | + | tig0024129:36338-36357 | Msa1414500:intron | 30.0% | |
| CTCAAAATACTTAAGCAAAG+AGG | - | tig0024129:36405-36424 | None:intergenic | 30.0% | |
| ! | CTCTTTGCTTAAGTATTTTG+AGG | + | tig0024129:36403-36422 | Msa1414500:intron | 30.0% |
| !! | AAATGTATGCGAAGAGTATT+TGG | - | tig0024129:36461-36480 | None:intergenic | 30.0% |
| GAGGATGAAGCTAAAATATT+AGG | - | tig0024129:36518-36537 | None:intergenic | 30.0% | |
| !! | ATCAGCTTTTTCTGTATAGA+AGG | - | tig0024129:36712-36731 | None:intergenic | 30.0% |
| TAAATGTCATAGAACTTCCA+AGG | + | tig0024129:36843-36862 | Msa1414500:intron | 30.0% | |
| TACAGAAAAACCATCAGAAT+CGG | - | tig0024129:36980-36999 | None:intergenic | 30.0% | |
| ! | TCTGATGGTTTTTCTGTAAA+TGG | + | tig0024129:36982-37001 | Msa1414500:CDS | 30.0% |
| ! | TTTTTCTGTAAATGGTACAC+TGG | + | tig0024129:36990-37009 | Msa1414500:CDS | 30.0% |
| ACATAAAGAAATATCAGACC+TGG | + | tig0024129:37020-37039 | Msa1414500:CDS | 30.0% | |
| TTTCAGCCCTTAAAAAACTT+GGG | + | tig0024129:37292-37311 | Msa1414500:CDS | 30.0% | |
| !! | TGAGTAGTTGTTCTAAAACT+AGG | + | tig0024129:37979-37998 | Msa1414500:intron | 30.0% |
| TGGAAACAAAATTGTACGAA+TGG | + | tig0024129:38549-38568 | Msa1414500:CDS | 30.0% | |
| AGCTGACATGTATATAAGTA+TGG | + | tig0024129:38846-38865 | Msa1414500:CDS | 30.0% | |
| GACATGTATATAAGTATGGA+AGG | + | tig0024129:38850-38869 | Msa1414500:CDS | 30.0% | |
| TATAAGTATGGAAGGAAATG+CGG | + | tig0024129:38858-38877 | Msa1414500:CDS | 30.0% | |
| ! | AATCTGATTCTGTAGTCTTA+TGG | + | tig0024129:39155-39174 | Msa1414500:intron | 30.0% |
| !!! | TCGAATGTTGGCTAATTTTT+TGG | + | tig0024129:39269-39288 | Msa1414500:intron | 30.0% |
| !! | GGATTCTGAGAATATTTTCT+TGG | + | tig0024129:39315-39334 | Msa1414500:intron | 30.0% |
| !! | TTCTTGGTAACCAATTTTTG+TGG | + | tig0024129:39331-39350 | Msa1414500:intron | 30.0% |
| GCAGAAAATTGAAACTCTTA+CGG | + | tig0024129:39370-39389 | Msa1414500:intron | 30.0% | |
| AAAAAAGTTGACGTGTAACT+AGG | - | tig0024129:39582-39601 | None:intergenic | 30.0% | |
| ! | TTTTGTTGAGTTTTACATGC+GGG | + | tig0024129:39633-39652 | Msa1414500:intron | 30.0% |
| !! | TATCTATCTCCTGGTTTTTA+TGG | + | tig0024129:39661-39680 | Msa1414500:intron | 30.0% |
| GTAAAAAAGTTGTCTACCTA+GGG | - | tig0024129:39743-39762 | None:intergenic | 30.0% | |
| TGTAAAAAAGTTGTCTACCT+AGG | - | tig0024129:39744-39763 | None:intergenic | 30.0% | |
| AGTTGAAGCATAAACAGAAA+CGG | - | tig0024129:39992-40011 | None:intergenic | 30.0% | |
| AGACTGTTATGTTATTATCC+AGG | + | tig0024129:40030-40049 | Msa1414500:intron | 30.0% | |
| AAACATATCTGCTGCTATAT+TGG | - | tig0024129:40083-40102 | None:intergenic | 30.0% | |
| ! | CCTTAAACTTTGGTTTAGTT+TGG | - | tig0024129:40532-40551 | None:intergenic | 30.0% |
| CCAAACTAAACCAAAGTTTA+AGG | + | tig0024129:40529-40548 | Msa1414500:intron | 30.0% | |
| TAAACAAGATGTTTCGAAGT+TGG | - | tig0024129:40866-40885 | None:intergenic | 30.0% | |
| GCATTTCACATGTATTTATC+TGG | - | tig0024129:40954-40973 | None:intergenic | 30.0% | |
| TAAATACATGTGAAATGCAC+AGG | + | tig0024129:40956-40975 | Msa1414500:intron | 30.0% | |
| ! | GTCAATCAATACTAACCTTT+TGG | + | tig0024129:41067-41086 | Msa1414500:intron | 30.0% |
| ! | AATACTAACCTTTTGGATTC+TGG | + | tig0024129:41074-41093 | Msa1414500:intron | 30.0% |
| !! | CTAAAGTGTTTTTGAAAGGA+CGG | - | tig0024129:41100-41119 | None:intergenic | 30.0% |
| GTCCTTTCAAAAACACTTTA+GGG | + | tig0024129:41099-41118 | Msa1414500:intron | 30.0% | |
| GGGCACATTTATTTACTTAT+TGG | + | tig0024129:41119-41138 | Msa1414500:intron | 30.0% | |
| !!! | TGTGGAGAATTTTCTGAAAT+GGG | - | tig0024129:41164-41183 | None:intergenic | 30.0% |
| !! | TTGTGGAGAATTTTCTGAAA+TGG | - | tig0024129:41165-41184 | None:intergenic | 30.0% |
| ! | ATTCTAAAGAGCAATACATG+CGG | - | tig0024129:41252-41271 | None:intergenic | 30.0% |
| !!! | TAACGTTGTGCAGTTTTATT+TGG | + | tig0024129:41383-41402 | Msa1414500:intron | 30.0% |
| TGTGAATGAAATTATCAGGA+AGG | + | tig0024129:41470-41489 | Msa1414500:CDS | 30.0% | |
| AAATGCAGATAGAATGTTGA+TGG | - | tig0024129:41570-41589 | None:intergenic | 30.0% | |
| TCATTAAACCATTCATCTTC+AGG | - | tig0024129:41679-41698 | None:intergenic | 30.0% | |
| TGAAATATGTCAAGATGCTA+TGG | + | tig0024129:41696-41715 | Msa1414500:CDS | 30.0% | |
| AAGATTAAGTGGAAAACCAA+AGG | + | tig0024129:41720-41739 | Msa1414500:CDS | 30.0% | |
| GGAAAACCAAAGGAAATAAA+CGG | + | tig0024129:41730-41749 | Msa1414500:CDS | 30.0% | |
| GAAAACCAAAGGAAATAAAC+GGG | + | tig0024129:41731-41750 | Msa1414500:CDS | 30.0% | |
| AAAACCAAAGGAAATAAACG+GGG | + | tig0024129:41732-41751 | Msa1414500:CDS | 30.0% | |
| TTGGACTGTACTAATTTACA+GGG | - | tig0024129:41848-41867 | None:intergenic | 30.0% | |
| ATTGGACTGTACTAATTTAC+AGG | - | tig0024129:41849-41868 | None:intergenic | 30.0% | |
| CCAGTAATTTCATGATAGAT+TGG | - | tig0024129:41867-41886 | None:intergenic | 30.0% | |
| CCAATCTATCATGAAATTAC+TGG | + | tig0024129:41864-41883 | Msa1414500:three_prime_UTR | 30.0% | |
| !!! | ATTTTTTGTCCCGTCAAATT+TGG | + | tig0024129:42020-42039 | Msa1414500:three_prime_UTR | 30.0% |
| AATGGAGTTAAGCTTGAAGA+AGG | + | tig0024129:32933-32952 | Msa1414500:CDS | 35.0% | |
| AACCTTATCATTGAGAGAAG+AGG | - | tig0024129:33012-33031 | None:intergenic | 35.0% | |
| GCAAGAAACAATGGATCAAA+GGG | - | tig0024129:33035-33054 | None:intergenic | 35.0% | |
| AGCAAGAAACAATGGATCAA+AGG | - | tig0024129:33036-33055 | None:intergenic | 35.0% | |
| GTAATCGAAGCAAGAAACAA+TGG | - | tig0024129:33044-33063 | None:intergenic | 35.0% | |
| ! | GCTTTCATTTTCCATTCATC+AGG | + | tig0024129:33066-33085 | Msa1414500:intron | 35.0% |
| GAGAATAGGTTAGAAACAAC+GGG | + | tig0024129:33435-33454 | Msa1414500:intron | 35.0% | |
| AGAATAGGTTAGAAACAACG+GGG | + | tig0024129:33436-33455 | Msa1414500:intron | 35.0% | |
| AAAATAAGCCCAGAAAAGCT+TGG | + | tig0024129:33601-33620 | Msa1414500:intron | 35.0% | |
| AAATAAGCCCAGAAAAGCTT+GGG | + | tig0024129:33602-33621 | Msa1414500:intron | 35.0% | |
| ! | CAATTTTCCCAAGCTTTTCT+GGG | - | tig0024129:33612-33631 | None:intergenic | 35.0% |
| ! | ACAATTTTCCCAAGCTTTTC+TGG | - | tig0024129:33613-33632 | None:intergenic | 35.0% |
| AAATCCCAATCCAAACAAAC+AGG | + | tig0024129:33682-33701 | Msa1414500:intron | 35.0% | |
| !! | GCTAACAAGGTTCTAAATTG+TGG | + | tig0024129:34059-34078 | Msa1414500:intron | 35.0% |
| ! | GTTCTAAATTGTGGTTGCTA+TGG | + | tig0024129:34068-34087 | Msa1414500:intron | 35.0% |
| TTCGTATACTTGGTTGAACA+GGG | + | tig0024129:34266-34285 | Msa1414500:intron | 35.0% | |
| TGCCTCTATTATGATCTACA+TGG | + | tig0024129:34313-34332 | Msa1414500:intron | 35.0% | |
| ! | GAACATAGTGAAAGAGTACA+AGG | + | tig0024129:34419-34438 | Msa1414500:intron | 35.0% |
| GACTACATGGTTATCACAAT+TGG | - | tig0024129:34450-34469 | None:intergenic | 35.0% | |
| AATGGAAAATTGCGACTACA+TGG | - | tig0024129:34463-34482 | None:intergenic | 35.0% | |
| !! | ATGTCTTATTTACACCATGC+AGG | + | tig0024129:34551-34570 | Msa1414500:intron | 35.0% |
| !! | TGTCTTATTTACACCATGCA+GGG | + | tig0024129:34552-34571 | Msa1414500:intron | 35.0% |
| AACACAAACTAACCGTATGA+AGG | - | tig0024129:34755-34774 | None:intergenic | 35.0% | |
| CTAGTAAAGAAAGTGGTTCA+AGG | + | tig0024129:34812-34831 | Msa1414500:intron | 35.0% | |
| TTTGATCTTGTGAAGCAAAG+AGG | + | tig0024129:34879-34898 | Msa1414500:intron | 35.0% | |
| !! | AAGCAAAGAGGTTGTTTTCA+AGG | + | tig0024129:34891-34910 | Msa1414500:intron | 35.0% |
| ! | TTTTTGGATGGTGAGAATGA+GGG | - | tig0024129:35636-35655 | None:intergenic | 35.0% |
| !! | ATTTTTGGATGGTGAGAATG+AGG | - | tig0024129:35637-35656 | None:intergenic | 35.0% |
| ! | AGATGGAAGTTACGCATTTT+TGG | - | tig0024129:35652-35671 | None:intergenic | 35.0% |
| AAAAGAAGACACCCAATTGT+GGG | - | tig0024129:35759-35778 | None:intergenic | 35.0% | |
| AAAAAGAAGACACCCAATTG+TGG | - | tig0024129:35760-35779 | None:intergenic | 35.0% | |
| ! | ATACGTTTGGAATACTGCTT+TGG | - | tig0024129:35896-35915 | None:intergenic | 35.0% |
| AAGCAGTATTCCAAACGTAT+AGG | + | tig0024129:35896-35915 | Msa1414500:intron | 35.0% | |
| ! | GAAATATTGGCCTATACGTT+TGG | - | tig0024129:35909-35928 | None:intergenic | 35.0% |
| ATACCAATCGATACCTGTAT+AGG | + | tig0024129:35999-36018 | Msa1414500:intron | 35.0% | |
| ACAAGTGCACATATTAGTGT+CGG | + | tig0024129:36035-36054 | Msa1414500:intron | 35.0% | |
| ! | ATTTTCACATTCGACGATGT+GGG | + | tig0024129:36151-36170 | Msa1414500:intron | 35.0% |
| TAGTGGCTACATAATTCCAT+TGG | + | tig0024129:36213-36232 | Msa1414500:intron | 35.0% | |
| !! | TATGCGAAGAGTATTTGGAT+TGG | - | tig0024129:36456-36475 | None:intergenic | 35.0% |
| TTCTAAATCGGATATCTCCT+TGG | - | tig0024129:36863-36882 | None:intergenic | 35.0% | |
| AAGGAGATATCCGATTTAGA+AGG | + | tig0024129:36862-36881 | Msa1414500:CDS | 35.0% | |
| TGAAAGCTCACCTTCTAAAT+CGG | - | tig0024129:36875-36894 | None:intergenic | 35.0% | |
| TTATCGATATCCGATTCTGA+TGG | + | tig0024129:36967-36986 | Msa1414500:CDS | 35.0% | |
| AAATATCAGACCTGGACAAA+TGG | + | tig0024129:37028-37047 | Msa1414500:CDS | 35.0% | |
| ! | AGTTGAGTTTCCTGATCTTT+TGG | + | tig0024129:37053-37072 | Msa1414500:CDS | 35.0% |
| AAGAGAACATCCAAAAGATC+AGG | - | tig0024129:37066-37085 | None:intergenic | 35.0% | |
| ! | TGATCTTTTGGATGTTCTCT+TGG | + | tig0024129:37065-37084 | Msa1414500:CDS | 35.0% |
| AGAATTCTATTACCGAACGT+AGG | + | tig0024129:37196-37215 | Msa1414500:CDS | 35.0% | |
| ! | AGCTAATTTTTGCCTACGTT+CGG | - | tig0024129:37211-37230 | None:intergenic | 35.0% |
| GTTTCAGCCCTTAAAAAACT+TGG | + | tig0024129:37291-37310 | Msa1414500:CDS | 35.0% | |
| TTCAGCCCTTAAAAAACTTG+GGG | + | tig0024129:37293-37312 | Msa1414500:CDS | 35.0% | |
| !!! | ACCATCCCCAAGTTTTTTAA+GGG | - | tig0024129:37301-37320 | None:intergenic | 35.0% |
| AGTATAACATGCAAAGTCTC+CGG | + | tig0024129:37367-37386 | Msa1414500:CDS | 35.0% | |
| !! | AGTGACTCATTGGCTATTTT+TGG | + | tig0024129:37468-37487 | Msa1414500:CDS | 35.0% |
| ATTCTTCTGAACTTGTGATG+TGG | + | tig0024129:37505-37524 | Msa1414500:CDS | 35.0% | |
| TTCTTCTGAACTTGTGATGT+GGG | + | tig0024129:37506-37525 | Msa1414500:CDS | 35.0% | |
| GAGTGTGTTCAAATAGCATT+GGG | + | tig0024129:37618-37637 | Msa1414500:CDS | 35.0% | |
| TCTAATGCTTGTTCAACACT+AGG | - | tig0024129:37708-37727 | None:intergenic | 35.0% | |
| CATATCCTCCTAATGCTAAT+CGG | + | tig0024129:37793-37812 | Msa1414500:CDS | 35.0% | |
| TTGAAATGCTGTTGTACTAC+CGG | - | tig0024129:37823-37842 | None:intergenic | 35.0% | |
| AACCATCAAATTGAAGCGAT+GGG | - | tig0024129:37865-37884 | None:intergenic | 35.0% | |
| !!! | TCAGGTGAGACTTTTAGTTT+TGG | + | tig0024129:37884-37903 | Msa1414500:intron | 35.0% |
| !! | AAAAGCACTACCAGAATCAA+TGG | + | tig0024129:38501-38520 | Msa1414500:CDS | 35.0% |
| CTTACAGGAATCTTGGTTTA+GGG | - | tig0024129:38665-38684 | None:intergenic | 35.0% | |
| TATCATCCTTACAGGAATCT+TGG | - | tig0024129:38672-38691 | None:intergenic | 35.0% | |
| AAAATCGTCATCCTGAACAA+CGG | + | tig0024129:38716-38735 | Msa1414500:CDS | 35.0% | |
| ! | TTTGAGCCTGATTTTTACAG+AGG | + | tig0024129:38804-38823 | Msa1414500:CDS | 35.0% |
| !! | GATTCCGTCTTTGATTTTTC+AGG | + | tig0024129:38894-38913 | Msa1414500:CDS | 35.0% |
| !!! | TTTTCAGGTATAATGGAACC+TGG | + | tig0024129:38909-38928 | Msa1414500:intron | 35.0% |
| ! | TTTCAGGTATAATGGAACCT+GGG | + | tig0024129:38910-38929 | Msa1414500:intron | 35.0% |
| GATATGTGTAACGAGGAAAA+AGG | + | tig0024129:39127-39146 | Msa1414500:intron | 35.0% | |
| AAGACTACAGAATCAGATTC+TGG | - | tig0024129:39154-39173 | None:intergenic | 35.0% | |
| ! | TTTGTTGAGTTTTACATGCG+GGG | + | tig0024129:39634-39653 | Msa1414500:intron | 35.0% |
| TATTCCACTCCATAAAAACC+AGG | - | tig0024129:39673-39692 | None:intergenic | 35.0% | |
| !!! | TTTTACATCTTAGTGGGTTC+AGG | + | tig0024129:39757-39776 | Msa1414500:intron | 35.0% |
| !! | TCAGTTTTATGAAAAGCTCC+TGG | - | tig0024129:40051-40070 | None:intergenic | 35.0% |
| ATAGCAGCAGATATGTTTGT+AGG | + | tig0024129:40085-40104 | Msa1414500:CDS | 35.0% | |
| TAGCAGCAGATATGTTTGTA+GGG | + | tig0024129:40086-40105 | Msa1414500:CDS | 35.0% | |
| ! | TTTCAGAAGATCAGAGCTTT+TGG | + | tig0024129:40167-40186 | Msa1414500:CDS | 35.0% |
| ! | TTCAGAAGATCAGAGCTTTT+GGG | + | tig0024129:40168-40187 | Msa1414500:CDS | 35.0% |
| !!! | TTTTGGGATGATATTGAGGA+AGG | + | tig0024129:40184-40203 | Msa1414500:CDS | 35.0% |
| ! | TTTGGGATGATATTGAGGAA+GGG | + | tig0024129:40185-40204 | Msa1414500:CDS | 35.0% |
| CTGAAACACTGATACCTAAT+AGG | + | tig0024129:40298-40317 | Msa1414500:intron | 35.0% | |
| GAATCAATTCGTGTCCTATT+AGG | - | tig0024129:40315-40334 | None:intergenic | 35.0% | |
| ! | TGTTTAAACCACTGGTTGTT+AGG | - | tig0024129:40432-40451 | None:intergenic | 35.0% |
| TTTGGATACTCTGCATTCTT+CGG | - | tig0024129:40514-40533 | None:intergenic | 35.0% | |
| AAGAAACTTAGCTGTGTATG+TGG | - | tig0024129:40655-40674 | None:intergenic | 35.0% | |
| TGTTCATTGTATCAAGCACA+TGG | + | tig0024129:41036-41055 | Msa1414500:intron | 35.0% | |
| CGTCCTTTCAAAAACACTTT+AGG | + | tig0024129:41098-41117 | Msa1414500:intron | 35.0% | |
| !! | TGCCCTAAAGTGTTTTTGAA+AGG | - | tig0024129:41104-41123 | None:intergenic | 35.0% |
| !!! | GAATTTTCTGAAATGGGTGT+TGG | - | tig0024129:41158-41177 | None:intergenic | 35.0% |
| AGTTTGCGTCTATTGATCTT+CGG | - | tig0024129:41308-41327 | None:intergenic | 35.0% | |
| !! | AGAATGTTGATGGTGAAACA+TGG | - | tig0024129:41560-41579 | None:intergenic | 35.0% |
| GCATTTGCAATTGTTTCCAT+TGG | + | tig0024129:41584-41603 | Msa1414500:intron | 35.0% | |
| ATTGTTTCCATTGGAAGTTG+TGG | + | tig0024129:41593-41612 | Msa1414500:intron | 35.0% | |
| GATGCTATGGAAAGATTAAG+TGG | + | tig0024129:41709-41728 | Msa1414500:CDS | 35.0% | |
| TCTCTATGATCCTAACCAAG+CGG | - | tig0024129:32667-32686 | None:intergenic | 40.0% | |
| TCTCCTTCGTGATCTTGTTA+TGG | + | tig0024129:32848-32867 | Msa1414500:exon | 40.0% | |
| CGATGATGAAGTCATCTTCA+CGG | + | tig0024129:32880-32899 | Msa1414500:CDS | 40.0% | |
| CTTATCATTGAGAGAAGAGG+TGG | - | tig0024129:33009-33028 | None:intergenic | 40.0% | |
| CACCTCTTCTCTCAATGATA+AGG | + | tig0024129:33007-33026 | Msa1414500:CDS | 40.0% | |
| CATGTGACACATGTTTGGAT+TGG | - | tig0024129:33779-33798 | None:intergenic | 40.0% | |
| ! | CCAACATTTTCTATCGAAGG+CGG | + | tig0024129:33806-33825 | Msa1414500:intron | 40.0% |
| TGAAGGTAATCACGTGTGTT+GGG | - | tig0024129:33877-33896 | None:intergenic | 40.0% | |
| TTGAAGGTAATCACGTGTGT+TGG | - | tig0024129:33878-33897 | None:intergenic | 40.0% | |
| ! | AGGTGAAGCATCTAACATGT+TGG | - | tig0024129:33932-33951 | None:intergenic | 40.0% |
| CAATTGCGACAACAAGATAC+AGG | - | tig0024129:34139-34158 | None:intergenic | 40.0% | |
| GGATATTAGCTGGTATCATC+TGG | - | tig0024129:34197-34216 | None:intergenic | 40.0% | |
| GATTGACAGAGGATATTAGC+TGG | - | tig0024129:34207-34226 | None:intergenic | 40.0% | |
| GTTCGTATACTTGGTTGAAC+AGG | + | tig0024129:34265-34284 | Msa1414500:intron | 40.0% | |
| ! | CTCTTTTTCTCTTTTTCCCC+AGG | + | tig0024129:34642-34661 | Msa1414500:intron | 40.0% |
| CTAACTATGCAGCCTTCATA+CGG | + | tig0024129:34740-34759 | Msa1414500:CDS | 40.0% | |
| GGTACAAACACATCTTTCTC+TGG | + | tig0024129:35446-35465 | Msa1414500:intron | 40.0% | |
| ! | TTTTGGATGGTGAGAATGAG+GGG | - | tig0024129:35635-35654 | None:intergenic | 40.0% |
| !! | GGAAGTTACGCATTTTTGGA+TGG | - | tig0024129:35648-35667 | None:intergenic | 40.0% |
| TCATGACATGATGAAGAGCA+AGG | + | tig0024129:35825-35844 | Msa1414500:intron | 40.0% | |
| !! | CTTCCTATACAGGTATCGAT+TGG | - | tig0024129:36005-36024 | None:intergenic | 40.0% |
| GTGCAATACTCTTCCTATAC+AGG | - | tig0024129:36015-36034 | None:intergenic | 40.0% | |
| ! | GCACATATTAGTGTCGGATA+CGG | + | tig0024129:36041-36060 | Msa1414500:intron | 40.0% |
| ! | CACATATTAGTGTCGGATAC+GGG | + | tig0024129:36042-36061 | Msa1414500:intron | 40.0% |
| ! | GATTTTCACATTCGACGATG+TGG | + | tig0024129:36150-36169 | Msa1414500:intron | 40.0% |
| ! | TTTTCACATTCGACGATGTG+GGG | + | tig0024129:36152-36171 | Msa1414500:intron | 40.0% |
| !! | AGAGTTTTGGCAATACGAAG+TGG | - | tig0024129:36184-36203 | None:intergenic | 40.0% |
| ! | TTGGATTTGCTCAAAGCATG+CGG | + | tig0024129:36279-36298 | Msa1414500:intron | 40.0% |
| CCACTTTGCCATTAGACAAT+TGG | - | tig0024129:36349-36368 | None:intergenic | 40.0% | |
| CCAATTGTCTAATGGCAAAG+TGG | + | tig0024129:36346-36365 | Msa1414500:intron | 40.0% | |
| ! | AGGAAGTACAATCCAGAACT+GGG | - | tig0024129:36385-36404 | None:intergenic | 40.0% |
| !! | TATTTTGAGGGTGCAGAAGA+GGG | + | tig0024129:36416-36435 | Msa1414500:intron | 40.0% |
| GAGAATTATCTCCCTGTATG+TGG | + | tig0024129:36624-36643 | Msa1414500:intron | 40.0% | |
| CCAGATTTACACCACATACA+GGG | - | tig0024129:36638-36657 | None:intergenic | 40.0% | |
| CCTGTATGTGGTGTAAATCT+GGG | + | tig0024129:36636-36655 | Msa1414500:intron | 40.0% | |
| ATGTGGTGTAAATCTGGGTA+TGG | + | tig0024129:36641-36660 | Msa1414500:intron | 40.0% | |
| TAAATCTGGGTATGGCAGTT+GGG | + | tig0024129:36649-36668 | Msa1414500:intron | 40.0% | |
| AGTGGATAGTAGGTTTCTGA+TGG | - | tig0024129:36899-36918 | None:intergenic | 40.0% | |
| ATGTATCAAGGTTGCTTGAG+TGG | - | tig0024129:36917-36936 | None:intergenic | 40.0% | |
| ACTCAAGCAACCTTGATACA+TGG | + | tig0024129:36916-36935 | Msa1414500:CDS | 40.0% | |
| AGCAACCTTGATACATGGTT+TGG | + | tig0024129:36921-36940 | Msa1414500:CDS | 40.0% | |
| TGAATCGATGTGAACTCCAT+CGG | - | tig0024129:36947-36966 | None:intergenic | 40.0% | |
| ACTCAACTAACCATTTGTCC+AGG | - | tig0024129:37041-37060 | None:intergenic | 40.0% | |
| GCAGAGACAGAAGTAAAGAT+GGG | - | tig0024129:37176-37195 | None:intergenic | 40.0% | |
| TGCAGAGACAGAAGTAAAGA+TGG | - | tig0024129:37177-37196 | None:intergenic | 40.0% | |
| !!! | GACCATCCCCAAGTTTTTTA+AGG | - | tig0024129:37302-37321 | None:intergenic | 40.0% |
| AGTATATGCTCCTCCATATG+AGG | - | tig0024129:37403-37422 | None:intergenic | 40.0% | |
| !!! | CTCATTGGCTATTTTTGGTG+AGG | + | tig0024129:37473-37492 | Msa1414500:CDS | 40.0% |
| ACAAGTTCAGAAGAATACGC+TGG | - | tig0024129:37501-37520 | None:intergenic | 40.0% | |
| !! | AACAGAAGCATTTGCTCTTC+TGG | + | tig0024129:37539-37558 | Msa1414500:CDS | 40.0% |
| CATTTGCTCTTCTGGTGAAA+AGG | + | tig0024129:37547-37566 | Msa1414500:CDS | 40.0% | |
| GGAGTGTGTTCAAATAGCAT+TGG | + | tig0024129:37617-37636 | Msa1414500:CDS | 40.0% | |
| TGCTCATTATTAGAAGCTCG+TGG | + | tig0024129:37645-37664 | Msa1414500:CDS | 40.0% | |
| GAACCATCAAATTGAAGCGA+TGG | - | tig0024129:37866-37885 | None:intergenic | 40.0% | |
| ! | TCGCTTCAATTTGATGGTTC+AGG | + | tig0024129:37866-37885 | Msa1414500:CDS | 40.0% |
| AATAGTGATATAGCAGCCGT+TGG | + | tig0024129:37949-37968 | Msa1414500:intron | 40.0% | |
| ATAGTGATATAGCAGCCGTT+GGG | + | tig0024129:37950-37969 | Msa1414500:intron | 40.0% | |
| AACTACTCACATTGTCCCAA+CGG | - | tig0024129:37968-37987 | None:intergenic | 40.0% | |
| CAAACTACATAAGGGAAACG+TGG | - | tig0024129:38327-38346 | None:intergenic | 40.0% | |
| CGTTTCCCTTATGTAGTTTG+TGG | + | tig0024129:38327-38346 | Msa1414500:intron | 40.0% | |
| GCTTATACAGGACTTCTTTG+AGG | + | tig0024129:38390-38409 | Msa1414500:intron | 40.0% | |
| !! | TCTTCTTCGTCCATTGATTC+TGG | - | tig0024129:38514-38533 | None:intergenic | 40.0% |
| !! | GAAGAAAGCTTTGAGGATTC+TGG | + | tig0024129:38529-38548 | Msa1414500:CDS | 40.0% |
| TAGTTCATCAGCCAGTAATG+AGG | - | tig0024129:38614-38633 | None:intergenic | 40.0% | |
| CCTTACAGGAATCTTGGTTT+AGG | - | tig0024129:38666-38685 | None:intergenic | 40.0% | |
| CCTAAACCAAGATTCCTGTA+AGG | + | tig0024129:38663-38682 | Msa1414500:CDS | 40.0% | |
| TCTACGGTTATCATCCTTAC+AGG | - | tig0024129:38680-38699 | None:intergenic | 40.0% | |
| ! | ATGACGATTTTGCCTTTCTG+TGG | - | tig0024129:38707-38726 | None:intergenic | 40.0% |
| AAATCGTCATCCTGAACAAC+GGG | + | tig0024129:38717-38736 | Msa1414500:CDS | 40.0% | |
| AAATCAGGCTCAAAGCATGT+TGG | - | tig0024129:38798-38817 | None:intergenic | 40.0% | |
| ! | AGCCTGATTTTTACAGAGGA+TGG | + | tig0024129:38808-38827 | Msa1414500:CDS | 40.0% |
| CACCATCCTCTGTAAAAATC+AGG | - | tig0024129:38813-38832 | None:intergenic | 40.0% | |
| GAAATGCGGATGAAGTTGAA+TGG | + | tig0024129:38872-38891 | Msa1414500:CDS | 40.0% | |
| CACTCGATGAAGAATGAACA+AGG | - | tig0024129:38989-39008 | None:intergenic | 40.0% | |
| ACACTTCTCATGCATAACAC+TGG | - | tig0024129:39037-39056 | None:intergenic | 40.0% | |
| ! | CCTGCTCTTTTCTTCTTGTT+GGG | + | tig0024129:39089-39108 | Msa1414500:intron | 40.0% |
| TTGTTGGGAACTTCTCTGTT+GGG | + | tig0024129:39104-39123 | Msa1414500:intron | 40.0% | |
| AACATTCGAAACTGTGGACA+AGG | - | tig0024129:39258-39277 | None:intergenic | 40.0% | |
| TTGTCCACAGTTTCGAATGT+TGG | + | tig0024129:39257-39276 | Msa1414500:intron | 40.0% | |
| TTAGCCAACATTCGAAACTG+TGG | - | tig0024129:39264-39283 | None:intergenic | 40.0% | |
| ATTTCCTTCTGTGGACAAAG+AGG | - | tig0024129:39540-39559 | None:intergenic | 40.0% | |
| !! | ATCTCCTGGTTTTTATGGAG+TGG | + | tig0024129:39666-39685 | Msa1414500:intron | 40.0% |
| AGCAGATATGTTTGTAGGGA+GGG | + | tig0024129:40090-40109 | Msa1414500:CDS | 40.0% | |
| !!! | GAGCTTTTGGGATGATATTG+AGG | + | tig0024129:40180-40199 | Msa1414500:CDS | 40.0% |
| ! | ATTTGGGACGCATCTTTGTA+AGG | + | tig0024129:40360-40379 | Msa1414500:intron | 40.0% |
| !! | CATCTTTGTAAGGCTAGTCT+TGG | + | tig0024129:40370-40389 | Msa1414500:intron | 40.0% |
| TGGTTGTTAGGAACTTGGAT+AGG | - | tig0024129:40420-40439 | None:intergenic | 40.0% | |
| AGCAATACATGCGGTTATGT+TGG | - | tig0024129:41243-41262 | None:intergenic | 40.0% | |
| ! | ATGTCAGCATTTTCTGCAAC+AGG | + | tig0024129:41495-41514 | Msa1414500:CDS | 40.0% |
| ! | TGTCAGCATTTTCTGCAACA+GGG | + | tig0024129:41496-41515 | Msa1414500:CDS | 40.0% |
| ! | ATGATGTTTTTCTCACCCCT+TGG | + | tig0024129:41930-41949 | Msa1414500:three_prime_UTR | 40.0% |
| !! | AAAAATGAAAGGGGTGCCAA+GGG | - | tig0024129:41949-41968 | None:intergenic | 40.0% |
| AAACGCAAGCCAAATTTGAC+GGG | - | tig0024129:42032-42051 | None:intergenic | 40.0% | |
| CAAACGCAAGCCAAATTTGA+CGG | - | tig0024129:42033-42052 | None:intergenic | 40.0% | |
| ! | CCTTCGTGATCTTGTTATGG+CGG | + | tig0024129:32851-32870 | Msa1414500:exon | 45.0% |
| ATCTTCACGGTCAAGAGCTA+CGG | + | tig0024129:32893-32912 | Msa1414500:CDS | 45.0% | |
| GCGGCGAGTGTTAAAGAAAA+TGG | + | tig0024129:32915-32934 | Msa1414500:CDS | 45.0% | |
| TTAGAAACAACGGGGCTGTT+TGG | + | tig0024129:33444-33463 | Msa1414500:intron | 45.0% | |
| TGGGCCTGTTTGTTTGGATT+GGG | - | tig0024129:33689-33708 | None:intergenic | 45.0% | |
| CCGCCTTCGATAGAAAATGT+TGG | - | tig0024129:33809-33828 | None:intergenic | 45.0% | |
| TGTTGGGGTTATGTTGGTGT+GGG | - | tig0024129:33861-33880 | None:intergenic | 45.0% | |
| GAAGGTAATCACGTGTGTTG+GGG | - | tig0024129:33876-33895 | None:intergenic | 45.0% | |
| CAAGATACAGGCAGGTTTGA+GGG | - | tig0024129:34127-34146 | None:intergenic | 45.0% | |
| ACAAGATACAGGCAGGTTTG+AGG | - | tig0024129:34128-34147 | None:intergenic | 45.0% | |
| TCGCAATTGCAGTTGTTGAC+TGG | + | tig0024129:34150-34169 | Msa1414500:intron | 45.0% | |
| CAAGAAATCTTCTCCCTGCA+TGG | - | tig0024129:34568-34587 | None:intergenic | 45.0% | |
| !! | CAAAGCATCACCTTGCTGTT+CGG | + | tig0024129:34937-34956 | Msa1414500:intron | 45.0% |
| TATCATCGGCATAGTGCACT+AGG | - | tig0024129:34988-35007 | None:intergenic | 45.0% | |
| ACAGATGGGTGAGATAGAAG+AGG | + | tig0024129:35147-35166 | Msa1414500:intron | 45.0% | |
| !! | TTCAGGTACTGGTTGTCTGA+CGG | + | tig0024129:35179-35198 | Msa1414500:intron | 45.0% |
| TCCCCTATTGTCCCACAATT+GGG | + | tig0024129:35745-35764 | Msa1414500:intron | 45.0% | |
| ACCCAATTGTGGGACAATAG+GGG | - | tig0024129:35749-35768 | None:intergenic | 45.0% | |
| CACCCAATTGTGGGACAATA+GGG | - | tig0024129:35750-35769 | None:intergenic | 45.0% | |
| ACACCCAATTGTGGGACAAT+AGG | - | tig0024129:35751-35770 | None:intergenic | 45.0% | |
| CACTACTACATATGTGCGCA+TGG | - | tig0024129:35964-35983 | None:intergenic | 45.0% | |
| !! | AAAAGCTTGAAGGGCACCAA+TGG | - | tig0024129:36232-36251 | None:intergenic | 45.0% |
| ! | GAGGAAGTACAATCCAGAAC+TGG | - | tig0024129:36386-36405 | None:intergenic | 45.0% |
| !! | GTATTTTGAGGGTGCAGAAG+AGG | + | tig0024129:36415-36434 | Msa1414500:intron | 45.0% |
| !! | ATTTTGAGGGTGCAGAAGAG+GGG | + | tig0024129:36417-36436 | Msa1414500:intron | 45.0% |
| CCCTGTATGTGGTGTAAATC+TGG | + | tig0024129:36635-36654 | Msa1414500:intron | 45.0% | |
| CCCAGATTTACACCACATAC+AGG | - | tig0024129:36639-36658 | None:intergenic | 45.0% | |
| GTAAATCTGGGTATGGCAGT+TGG | + | tig0024129:36648-36667 | Msa1414500:intron | 45.0% | |
| AAATCTGGGTATGGCAGTTG+GGG | + | tig0024129:36650-36669 | Msa1414500:intron | 45.0% | |
| AGGTTGCTTGAGTGGATAGT+AGG | - | tig0024129:36909-36928 | None:intergenic | 45.0% | |
| ATCGGCCAAACCATGTATCA+AGG | - | tig0024129:36929-36948 | None:intergenic | 45.0% | |
| ! | TTGATACATGGTTTGGCCGA+TGG | + | tig0024129:36928-36947 | Msa1414500:CDS | 45.0% |
| TGGATGTTCTCTTGGCTGAA+AGG | + | tig0024129:37073-37092 | Msa1414500:CDS | 45.0% | |
| AAGGCGAGTAGAAGAAGCTT+TGG | + | tig0024129:37092-37111 | Msa1414500:CDS | 45.0% | |
| ACGTTCTCCTTCATCAAGAG+CGG | - | tig0024129:37118-37137 | None:intergenic | 45.0% | |
| ATGCACGAAGTTCAGATCCA+CGG | - | tig0024129:37269-37288 | None:intergenic | 45.0% | |
| GCCCTTAAAAAACTTGGGGA+TGG | + | tig0024129:37297-37316 | Msa1414500:CDS | 45.0% | |
| ! | CCTCCATATGAGGTGTTTGA+CGG | - | tig0024129:37393-37412 | None:intergenic | 45.0% |
| ACAAGCTGCAAGTGACTCAT+TGG | + | tig0024129:37458-37477 | Msa1414500:CDS | 45.0% | |
| ! | TCTGGTGAAAAGGCATGCAT+TGG | + | tig0024129:37557-37576 | Msa1414500:CDS | 45.0% |
| !! | ACAAGAGAGTACTGCTGCTA+TGG | + | tig0024129:37746-37765 | Msa1414500:CDS | 45.0% |
| TATGGCTGCTGCTGATGATT+GGG | + | tig0024129:37764-37783 | Msa1414500:CDS | 45.0% | |
| TGCCCATCGCTTCAATTTGA+TGG | + | tig0024129:37860-37879 | Msa1414500:CDS | 45.0% | |
| ! | CAGGACTTCTTTGAGGATGT+AGG | + | tig0024129:38397-38416 | Msa1414500:intron | 45.0% |
| ACCTCTGCTTAGTATGCAGT+TGG | + | tig0024129:38420-38439 | Msa1414500:CDS | 45.0% | |
| CCTCTGCTTAGTATGCAGTT+GGG | + | tig0024129:38421-38440 | Msa1414500:CDS | 45.0% | |
| GGACGAAGAAGAAAGCTTTG+AGG | + | tig0024129:38522-38541 | Msa1414500:CDS | 45.0% | |
| AATCTGCTGGGCTTCAGTTT+CGG | - | tig0024129:38575-38594 | None:intergenic | 45.0% | |
| GCTAGCTAATGCCTCATTAC+TGG | + | tig0024129:38600-38619 | Msa1414500:CDS | 45.0% | |
| ACAGGAATCTTGGTTTAGGG+AGG | - | tig0024129:38662-38681 | None:intergenic | 45.0% | |
| ACCGTAGAAGAACCACAGAA+AGG | + | tig0024129:38692-38711 | Msa1414500:CDS | 45.0% | |
| GCCTTTCTGTGGTTCTTCTA+CGG | - | tig0024129:38696-38715 | None:intergenic | 45.0% | |
| GGCAGAAAGGAAAAGTAGAG+AGG | - | tig0024129:39071-39090 | None:intergenic | 45.0% | |
| GAAGAAAAGAGCAGGCAGAA+AGG | - | tig0024129:39084-39103 | None:intergenic | 45.0% | |
| ! | GCCTGCTCTTTTCTTCTTGT+TGG | + | tig0024129:39088-39107 | Msa1414500:intron | 45.0% |
| CCCAACAAGAAGAAAAGAGC+AGG | - | tig0024129:39092-39111 | None:intergenic | 45.0% | |
| CTTGTTGGGAACTTCTCTGT+TGG | + | tig0024129:39103-39122 | Msa1414500:intron | 45.0% | |
| TGTTGGGAACTTCTCTGTTG+GGG | + | tig0024129:39105-39124 | Msa1414500:intron | 45.0% | |
| TGTTGGGGATATGTGTAACG+AGG | + | tig0024129:39120-39139 | Msa1414500:intron | 45.0% | |
| !! | GAAACTCTTACGGCATTGAC+TGG | + | tig0024129:39380-39399 | Msa1414500:intron | 45.0% |
| TGTTCCTCTTTGTCCACAGA+AGG | + | tig0024129:39533-39552 | Msa1414500:intron | 45.0% | |
| AGTTGTCTACCTAGGGACAT+GGG | - | tig0024129:39736-39755 | None:intergenic | 45.0% | |
| AAGTTGTCTACCTAGGGACA+TGG | - | tig0024129:39737-39756 | None:intergenic | 45.0% | |
| CAGCAGATATGTTTGTAGGG+AGG | + | tig0024129:40089-40108 | Msa1414500:CDS | 45.0% | |
| ATGATATTGAGGAAGGGCCA+AGG | + | tig0024129:40191-40210 | Msa1414500:CDS | 45.0% | |
| TGTAGACCAAGAGGACCTAA+AGG | - | tig0024129:40217-40236 | None:intergenic | 45.0% | |
| CATACCTGTTGTAGACCAAG+AGG | - | tig0024129:40226-40245 | None:intergenic | 45.0% | |
| AACTTGGATAGGTCAGTGCT+TGG | - | tig0024129:40409-40428 | None:intergenic | 45.0% | |
| TCCAAGTTCCTAACAACCAG+TGG | + | tig0024129:40421-40440 | Msa1414500:intron | 45.0% | |
| ! | ACCACTGGTTGTTAGGAACT+TGG | - | tig0024129:40425-40444 | None:intergenic | 45.0% |
| ! | GTTGTGTGTTTTGCCTCCAA+CGG | + | tig0024129:41417-41436 | Msa1414500:CDS | 45.0% |
| ! | AGCATTTTCTGCAACAGGGA+TGG | + | tig0024129:41500-41519 | Msa1414500:CDS | 45.0% |
| TTCAGAGCCACAACTTCCAA+TGG | - | tig0024129:41603-41622 | None:intergenic | 45.0% | |
| GTGATCTGCCTGAAGATGAA+TGG | + | tig0024129:41668-41687 | Msa1414500:intron | 45.0% | |
| CTCTCCCCGTTTATTTCCTT+TGG | - | tig0024129:41739-41758 | None:intergenic | 45.0% | |
| !! | AAAATGAAAGGGGTGCCAAG+GGG | - | tig0024129:41948-41967 | None:intergenic | 45.0% |
| !! | CAAAAATGAAAGGGGTGCCA+AGG | - | tig0024129:41950-41969 | None:intergenic | 45.0% |
| CCGCCATAACAAGATCACGA+AGG | - | tig0024129:32854-32873 | None:intergenic | 50.0% | |
| ! | TCGTGATCTTGTTATGGCGG+CGG | + | tig0024129:32854-32873 | Msa1414500:exon | 50.0% |
| CTGGGCCTGTTTGTTTGGAT+TGG | - | tig0024129:33690-33709 | None:intergenic | 50.0% | |
| TGACACTGGGCCTGTTTGTT+TGG | - | tig0024129:33695-33714 | None:intergenic | 50.0% | |
| ACACTGATACGTGTCGGACA+CGG | - | tig0024129:33838-33857 | None:intergenic | 50.0% | |
| TGTGGGACACTGATACGTGT+CGG | - | tig0024129:33844-33863 | None:intergenic | 50.0% | |
| GTGTTGGGGTTATGTTGGTG+TGG | - | tig0024129:33862-33881 | None:intergenic | 50.0% | |
| CACGTGTGTTGGGGTTATGT+TGG | - | tig0024129:33867-33886 | None:intergenic | 50.0% | |
| TGCGACAACAAGATACAGGC+AGG | - | tig0024129:34135-34154 | None:intergenic | 50.0% | |
| CTTGAAAAGAGCTTCTGCCG+AGG | + | tig0024129:34696-34715 | Msa1414500:CDS | 50.0% | |
| CCAAGACTCACCCAACTAGT+GGG | + | tig0024129:34960-34979 | Msa1414500:intron | 50.0% | |
| GGTGAGATAGAAGAGGCAGT+GGG | + | tig0024129:35154-35173 | Msa1414500:intron | 50.0% | |
| GTGAGATAGAAGAGGCAGTG+GGG | + | tig0024129:35155-35174 | Msa1414500:intron | 50.0% | |
| CAATTGTGGGACAATAGGGG+AGG | - | tig0024129:35746-35765 | None:intergenic | 50.0% | |
| CTCCCCTATTGTCCCACAAT+TGG | + | tig0024129:35744-35763 | Msa1414500:intron | 50.0% | |
| TACAATCCAGAACTGGGCTG+TGG | - | tig0024129:36379-36398 | None:intergenic | 50.0% | |
| !! | TTTTGAGGGTGCAGAAGAGG+GGG | + | tig0024129:36418-36437 | Msa1414500:intron | 50.0% |
| AATCTGGGTATGGCAGTTGG+GGG | + | tig0024129:36651-36670 | Msa1414500:intron | 50.0% | |
| AGTTCAGATCCACGGGTAGA+AGG | - | tig0024129:37261-37280 | None:intergenic | 50.0% | |
| TGCACGAAGTTCAGATCCAC+GGG | - | tig0024129:37268-37287 | None:intergenic | 50.0% | |
| AGTAGCAAGCTGTGAGCATG+CGG | - | tig0024129:37324-37343 | None:intergenic | 50.0% | |
| ! | CATATGAGGTGTTTGACGGC+CGG | - | tig0024129:37389-37408 | None:intergenic | 50.0% |
| CCGTCAAACACCTCATATGG+AGG | + | tig0024129:37390-37409 | Msa1414500:CDS | 50.0% | |
| ! | TACTGCAGCTCTAGCACAAC+TGG | + | tig0024129:37419-37438 | Msa1414500:CDS | 50.0% |
| AGGAGGTTTAAGAGCTGCTG+CGG | + | tig0024129:37596-37615 | Msa1414500:CDS | 50.0% | |
| CTATGGCTGCTGCTGATGAT+TGG | + | tig0024129:37763-37782 | Msa1414500:CDS | 50.0% | |
| ! | GTCTGCCGATTAGCATTAGG+AGG | - | tig0024129:37801-37820 | None:intergenic | 50.0% |
| CCTAATGCTAATCGGCAGAC+CGG | + | tig0024129:37801-37820 | Msa1414500:CDS | 50.0% | |
| CCCAACTGCATACTAAGCAG+AGG | - | tig0024129:38424-38443 | None:intergenic | 50.0% | |
| CTGCTTAGTATGCAGTTGGG+AGG | + | tig0024129:38424-38443 | Msa1414500:CDS | 50.0% | |
| AGCTAGCAGTGCAATCTGCT+GGG | - | tig0024129:38587-38606 | None:intergenic | 50.0% | |
| TAGCTAGCAGTGCAATCTGC+TGG | - | tig0024129:38588-38607 | None:intergenic | 50.0% | |
| GTTTAGGGAGGAGAGCTTCA+TGG | - | tig0024129:38650-38669 | None:intergenic | 50.0% | |
| GTCATCCTGAACAACGGGAA+TGG | + | tig0024129:38722-38741 | Msa1414500:CDS | 50.0% | |
| ATCCTGAACAACGGGAATGG+AGG | + | tig0024129:38725-38744 | Msa1414500:CDS | 50.0% | |
| !! | CATCTTAGTGGGTTCAGGCT+TGG | + | tig0024129:39762-39781 | Msa1414500:intron | 50.0% |
| AGGTCCTCTTGGTCTACAAC+AGG | + | tig0024129:40219-40238 | Msa1414500:CDS | 50.0% | |
| AAGGACGGCCAGAATCCAAA+AGG | - | tig0024129:41085-41104 | None:intergenic | 50.0% | |
| ! | TGTGTTTTGCCTCCAACGGT+CGG | + | tig0024129:41421-41440 | Msa1414500:CDS | 50.0% |
| TGACAAATACCGACCGTTGG+AGG | - | tig0024129:41433-41452 | None:intergenic | 50.0% | |
| CCTTGACAAATACCGACCGT+TGG | - | tig0024129:41436-41455 | None:intergenic | 50.0% | |
| CCAACGGTCGGTATTTGTCA+AGG | + | tig0024129:41433-41452 | Msa1414500:CDS | 50.0% | |
| CAACAGGGATGGATCCGTAT+AGG | + | tig0024129:41511-41530 | Msa1414500:CDS | 50.0% | |
| GTGCAGAGACAGATGCAGTA+GGG | - | tig0024129:41774-41793 | None:intergenic | 50.0% | |
| TGTGCAGAGACAGATGCAGT+AGG | - | tig0024129:41775-41794 | None:intergenic | 50.0% | |
| AGTCACGCGCACTGTGTGTT+TGG | - | tig0024129:32709-32728 | None:intergenic | 55.0% | |
| TTCACGGTCAAGAGCTACGG+CGG | + | tig0024129:32896-32915 | Msa1414500:CDS | 55.0% | |
| CACTGATACGTGTCGGACAC+GGG | - | tig0024129:33837-33856 | None:intergenic | 55.0% | |
| GACACTTCTGCGCATCTCCT+CGG | - | tig0024129:34716-34735 | None:intergenic | 55.0% | |
| TGAGTCTTGGCCGAACAGCA+AGG | - | tig0024129:34950-34969 | None:intergenic | 55.0% | |
| GCCAAGACTCACCCAACTAG+TGG | + | tig0024129:34959-34978 | Msa1414500:intron | 55.0% | |
| CCCACTAGTTGGGTGAGTCT+TGG | - | tig0024129:34963-34982 | None:intergenic | 55.0% | |
| GCACTAGGCTCCCACTAGTT+GGG | - | tig0024129:34973-34992 | None:intergenic | 55.0% | |
| TGCACTAGGCTCCCACTAGT+TGG | - | tig0024129:34974-34993 | None:intergenic | 55.0% | |
| GGGTGAGATAGAAGAGGCAG+TGG | + | tig0024129:35153-35172 | Msa1414500:intron | 55.0% | |
| AGAAGAGGCAGTGGGGTTTC+AGG | + | tig0024129:35162-35181 | Msa1414500:intron | 55.0% | |
| ATCTGGGTATGGCAGTTGGG+GGG | + | tig0024129:36652-36671 | Msa1414500:intron | 55.0% | |
| GCTTTGGCCGCTCTTGATGA+AGG | + | tig0024129:37108-37127 | Msa1414500:CDS | 55.0% | |
| CGGCCGTCAAACACCTCATA+TGG | + | tig0024129:37387-37406 | Msa1414500:CDS | 55.0% | |
| TTGGCTTCATCAGCAGCTGC+AGG | + | tig0024129:37576-37595 | Msa1414500:CDS | 55.0% | |
| ! | CCGGTCTGCCGATTAGCATT+AGG | - | tig0024129:37804-37823 | None:intergenic | 55.0% |
| !! | TTGGGAGGACAAGCTCTGGA+AGG | + | tig0024129:38439-38458 | Msa1414500:CDS | 55.0% |
| !! | TGGGAGGACAAGCTCTGGAA+GGG | + | tig0024129:38440-38459 | Msa1414500:CDS | 55.0% |
| CTCCTCCATTCCCGTTGTTC+AGG | - | tig0024129:38730-38749 | None:intergenic | 55.0% | |
| GAATGGAGGAGACGACTCGT+GGG | + | tig0024129:38739-38758 | Msa1414500:CDS | 55.0% | |
| GACTCGTGGGTTCAGTTGAC+AGG | + | tig0024129:38752-38771 | Msa1414500:CDS | 55.0% | |
| CGGGGTGCATATCTATCTCC+TGG | + | tig0024129:39652-39671 | Msa1414500:intron | 55.0% | |
| TGTCTACCTAGGGACATGGG+AGG | - | tig0024129:39733-39752 | None:intergenic | 55.0% | |
| CCAAGAGGACCTAAAGGCCT+TGG | - | tig0024129:40211-40230 | None:intergenic | 55.0% | |
| CCAAGGCCTTTAGGTCCTCT+TGG | + | tig0024129:40208-40227 | Msa1414500:CDS | 55.0% | |
| TAGATTGGCGCGTGTGTGCG+TGG | + | tig0024129:32793-32812 | Msa1414500:five_prime_UTR | 60.0% | |
| ! | GGCAGTGGGGTTTCAGGTAC+TGG | + | tig0024129:35168-35187 | Msa1414500:intron | 60.0% |
| TCTGGGTATGGCAGTTGGGG+GGG | + | tig0024129:36653-36672 | Msa1414500:intron | 60.0% | |
| GCTTGTCAGCCTTCTACCCG+TGG | + | tig0024129:37249-37268 | Msa1414500:CDS | 60.0% | |
| GCTTCATCAGCAGCTGCAGG+AGG | + | tig0024129:37579-37598 | Msa1414500:CDS | 60.0% | |
| GCAGTTGGGAGGACAAGCTC+TGG | + | tig0024129:38435-38454 | Msa1414500:CDS | 60.0% | |
| GGAATGGAGGAGACGACTCG+TGG | + | tig0024129:38738-38757 | Msa1414500:CDS | 60.0% | |
| GAAGCTCCTCCCATGTCCCT+AGG | + | tig0024129:39724-39743 | Msa1414500:intron | 60.0% | |
| GAGGAAGGGCCAAGGCCTTT+AGG | + | tig0024129:40199-40218 | Msa1414500:CDS | 60.0% | |
| GCTCTGCCACAGCCCAGTTC+TGG | + | tig0024129:36370-36389 | Msa1414500:intron | 65.0% | |
| CTGGGTATGGCAGTTGGGGG+GGG | + | tig0024129:36654-36673 | Msa1414500:intron | 65.0% | |
| TGGGTATGGCAGTTGGGGGG+GGG | + | tig0024129:36655-36674 | Msa1414500:intron | 65.0% | |
| GAGAGCTTCATGGCTGCGCG+TGG | - | tig0024129:38640-38659 | None:intergenic | 65.0% | |
| GGGTATGGCAGTTGGGGGGG+GGG | + | tig0024129:36656-36675 | Msa1414500:intron | 70.0% | |
| GGTATGGCAGTTGGGGGGGG+GGG | + | tig0024129:36657-36676 | Msa1414500:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024129 | gene | 32662 | 42118 | 32662 | ID=Msa1414500;Name=Msa1414500 |
| tig0024129 | mRNA | 32662 | 42118 | 32662 | ID=Msa1414500-mRNA-1;Parent=Msa1414500;Name=Msa1414500-mRNA-1;_AED=0.02;_eAED=0.02;_QI=205|1|1|1|1|1|7|287|765 |
| tig0024129 | exon | 32662 | 33028 | 32662 | ID=Msa1414500-mRNA-1:exon:21826;Parent=Msa1414500-mRNA-1 |
| tig0024129 | exon | 34664 | 34761 | 34664 | ID=Msa1414500-mRNA-1:exon:21827;Parent=Msa1414500-mRNA-1 |
| tig0024129 | exon | 36855 | 37887 | 36855 | ID=Msa1414500-mRNA-1:exon:21828;Parent=Msa1414500-mRNA-1 |
| tig0024129 | exon | 38400 | 38915 | 38400 | ID=Msa1414500-mRNA-1:exon:21829;Parent=Msa1414500-mRNA-1 |
| tig0024129 | exon | 40052 | 40240 | 40052 | ID=Msa1414500-mRNA-1:exon:21830;Parent=Msa1414500-mRNA-1 |
| tig0024129 | exon | 41396 | 41532 | 41396 | ID=Msa1414500-mRNA-1:exon:21831;Parent=Msa1414500-mRNA-1 |
| tig0024129 | exon | 41669 | 42118 | 41669 | ID=Msa1414500-mRNA-1:exon:21832;Parent=Msa1414500-mRNA-1 |
| tig0024129 | five_prime_UTR | 32662 | 32866 | 32662 | ID=Msa1414500-mRNA-1:five_prime_utr;Parent=Msa1414500-mRNA-1 |
| tig0024129 | CDS | 32867 | 33028 | 32867 | ID=Msa1414500-mRNA-1:cds;Parent=Msa1414500-mRNA-1 |
| tig0024129 | CDS | 34664 | 34761 | 34664 | ID=Msa1414500-mRNA-1:cds;Parent=Msa1414500-mRNA-1 |
| tig0024129 | CDS | 36855 | 37887 | 36855 | ID=Msa1414500-mRNA-1:cds;Parent=Msa1414500-mRNA-1 |
| tig0024129 | CDS | 38400 | 38915 | 38400 | ID=Msa1414500-mRNA-1:cds;Parent=Msa1414500-mRNA-1 |
| tig0024129 | CDS | 40052 | 40240 | 40052 | ID=Msa1414500-mRNA-1:cds;Parent=Msa1414500-mRNA-1 |
| tig0024129 | CDS | 41396 | 41532 | 41396 | ID=Msa1414500-mRNA-1:cds;Parent=Msa1414500-mRNA-1 |
| tig0024129 | CDS | 41669 | 41831 | 41669 | ID=Msa1414500-mRNA-1:cds;Parent=Msa1414500-mRNA-1 |
| tig0024129 | three_prime_UTR | 41832 | 42118 | 41832 | ID=Msa1414500-mRNA-1:three_prime_utr;Parent=Msa1414500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
