AlfalfaGEDB | Msa0709670

M. sativa cultivar zhongmu-4 / Msa0709670

KEGG: K02725
GO: GO:0000003 GO:0000226 GO:0003006 GO:0003674 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005628 GO:0005634 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0008150 GO:0008525 GO:0008526 GO:0009653 GO:0009987 GO:0010876 GO:0010927 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016192 GO:0019953 GO:0022402 GO:0022413 GO:0022414 GO:0022607 GO:0030154 GO:0030427 GO:0030435 GO:0030437 GO:0031321 GO:0031322 GO:0032153 GO:0032502 GO:0032505 GO:0032989 GO:0033036 GO:0034293 GO:0035838 GO:0042763 GO:0042764 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0043935 GO:0044085 GO:0044424 GO:0044464 GO:0044703 GO:0048193 GO:0048468 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051286 GO:0051321 GO:0051704 GO:0060187 GO:0061024 GO:0071702 GO:0071840 GO:0071944 GO:0120009 GO:0120010 GO:1903046
PFAM: PF03765.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0709670	XP_013462148.1	80.920	587	45	5	11	550	4	570	0.0	867

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0709670	sp\|F4JVA6\|SFH6_ARATH	52.614	612	214	9	12	560	16	614	0.0	572

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0709670	A0A072V497	80.920	587	45	5	11	550	4	570	0.0	867

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0614990	Msa0709670	0.811058	8.463799e-51	-8.615850e-47
Msa0650730	Msa0709670	0.819712	1.005429e-52	-8.615850e-47
Msa0709670	Msa0755080	0.820588	6.334623e-53	-8.615850e-47
Msa0709670	Msa0796950	0.806856	6.713188e-50	-8.615850e-47
Msa0709670	Msa0834450	0.813722	2.216217e-51	-8.615850e-47
Msa0709670	Msa1174870	0.804512	2.084309e-49	-8.615850e-47
Msa0709670	Msa1234730	0.810403	1.173041e-50	-8.615850e-47
Msa0709670	Msa1315110	0.815115	1.090610e-51	-8.615850e-47
Msa0197180	Msa0709670	0.813914	2.011296e-51	-8.615850e-47
Msa0377010	Msa0709670	0.934604	3.122204e-96	-8.615850e-47
Msa0384540	Msa0709670	0.854823	9.522562e-62	-8.615850e-47
Msa0435000	Msa0709670	0.922349	1.103153e-88	-8.615850e-47
Msa0479040	Msa0709670	0.943258	1.664793e-102	-8.615850e-47
Msa0479090	Msa0709670	0.929110	1.110967e-92	-8.615850e-47
Msa0479940	Msa0709670	0.924470	6.746461e-90	-8.615850e-47
Msa0308770	Msa0709670	0.814122	1.809486e-51	-8.615850e-47
Msa0579350	Msa0709670	0.807645	4.567960e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0709670	MtrunA17_Chr3g0141821	80.920	587	45	5	11	550	4	570	0.0	867
Msa0709670	MtrunA17_Chr1g0155521	58.882	608	168	9	14	549	18	615	0.0	657
Msa0709670	MtrunA17_Chr4g0035391	49.918	611	213	11	14	549	18	610	0.0	535
Msa0709670	MtrunA17_Chr3g0144911	59.601	401	109	3	14	361	18	418	3.42e-165	476
Msa0709670	MtrunA17_Chr5g0404711	55.937	320	86	3	31	301	10	323	3.62e-123	370
Msa0709670	MtrunA17_Chr5g0404711	40.789	76	45	0	475	550	397	472	3.04e-11	65.9
Msa0709670	MtrunA17_Chr3g0144891	42.687	588	219	12	20	541	20	555	1.24e-122	372
Msa0709670	MtrunA17_Chr8g0372651	56.173	324	87	3	25	302	13	327	3.62e-114	350
Msa0709670	MtrunA17_Chr7g0236461	49.254	335	117	5	11	293	6	339	1.26e-105	329
Msa0709670	MtrunA17_Chr3g0080051	37.134	614	300	12	13	549	8	612	3.34e-105	329
Msa0709670	MtrunA17_Chr4g0035361	41.584	505	186	13	100	541	1	459	1.98e-104	322
Msa0709670	MtrunA17_Chr8g0369291	35.726	585	283	11	37	549	33	596	1.24e-93	298
Msa0709670	MtrunA17_Chr4g0035381	48.718	273	87	2	71	290	48	320	1.62e-85	271
Msa0709670	MtrunA17_Chr5g0399151	43.728	279	111	1	59	291	74	352	4.42e-78	253
Msa0709670	MtrunA17_Chr3g0144901	51.852	135	44	2	436	549	56	190	2.36e-28	112
Msa0709670	MtrunA17_Chr7g0243541	30.769	169	106	6	100	264	116	277	2.96e-14	75.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0709670	AT4G39170.1	52.614	612	214	9	12	560	16	614	0.0	572
Msa0709670	AT4G39170.2	52.451	612	213	10	12	560	16	612	0.0	564
Msa0709670	AT2G21520.1	51.204	623	210	11	6	549	13	620	0.0	557
Msa0709670	AT2G21520.2	51.204	623	210	11	6	549	17	624	0.0	557
Msa0709670	AT2G21520.3	51.204	623	210	11	6	549	17	624	0.0	557
Msa0709670	AT1G75370.1	48.465	619	219	10	12	554	16	610	9.08e-162	474
Msa0709670	AT1G19650.1	46.645	611	226	12	15	549	16	602	7.46e-161	472
Msa0709670	AT1G75370.2	48.548	620	219	10	12	555	16	611	1.09e-160	474
Msa0709670	AT1G19650.2	46.463	523	189	9	97	549	29	530	1.07e-140	418
Msa0709670	AT2G18180.2	42.629	563	227	11	30	541	17	534	5.57e-137	409
Msa0709670	AT2G18180.1	42.629	563	227	11	30	541	17	534	9.62e-137	409
Msa0709670	AT1G19650.3	51.034	435	131	6	15	397	16	420	2.57e-130	388
Msa0709670	AT2G21540.6	57.485	334	91	3	20	307	18	346	7.34e-130	390
Msa0709670	AT2G21540.2	57.485	334	91	3	20	307	18	346	7.34e-130	390
Msa0709670	AT2G21540.1	57.485	334	91	3	20	307	18	346	7.34e-130	390
Msa0709670	AT2G21540.4	57.485	334	91	3	20	307	18	346	7.34e-130	390
Msa0709670	AT2G21540.3	57.485	334	91	3	20	307	18	346	8.17e-130	390
Msa0709670	AT2G21540.5	57.485	334	91	3	20	307	18	346	8.17e-130	390
Msa0709670	AT4G34580.2	58.154	325	88	2	21	299	11	333	1.46e-128	387
Msa0709670	AT4G34580.1	58.154	325	88	2	21	299	11	333	1.46e-128	387
Msa0709670	AT4G39180.1	52.877	365	121	4	20	337	18	378	6.36e-127	383
Msa0709670	AT4G39180.3	57.362	326	89	3	20	298	18	340	1.02e-126	383
Msa0709670	AT4G39180.2	57.362	326	89	3	20	298	18	340	1.02e-126	383
Msa0709670	AT4G36490.1	57.367	319	83	4	29	300	12	324	1.00e-123	375
Msa0709670	AT4G36490.1	53.731	67	31	0	475	541	465	531	6.54e-14	75.1
Msa0709670	AT2G16380.2	40.871	597	220	15	20	547	9	541	1.11e-123	375
Msa0709670	AT2G16380.1	40.871	597	220	15	20	547	9	541	1.11e-123	375
Msa0709670	AT3G24840.1	54.348	322	97	4	20	293	23	342	8.69e-111	342
Msa0709670	AT3G24840.6	54.348	322	97	4	20	293	23	342	8.69e-111	342
Msa0709670	AT3G24840.4	54.348	322	97	4	20	293	23	342	8.69e-111	342
Msa0709670	AT3G24840.2	54.348	322	97	4	20	293	23	342	8.69e-111	342
Msa0709670	AT3G24840.7	54.348	322	97	4	20	293	23	342	9.84e-111	342
Msa0709670	AT3G24840.3	54.348	322	97	4	20	293	23	342	9.84e-111	342
Msa0709670	AT3G24840.5	54.348	322	97	4	20	293	23	342	9.84e-111	342
Msa0709670	AT2G18180.4	54.044	272	70	2	101	317	11	282	5.43e-99	308
Msa0709670	AT2G18180.4	53.731	67	31	0	475	541	397	463	5.44e-14	75.1
Msa0709670	AT2G18180.3	54.044	272	70	2	101	317	11	282	7.28e-99	308
Msa0709670	AT2G18180.3	53.731	67	31	0	475	541	397	463	5.77e-14	74.7
Msa0709670	AT1G55690.2	45.387	401	160	7	13	362	22	414	1.72e-94	301
Msa0709670	AT1G55690.4	45.387	401	160	7	13	362	22	414	1.72e-94	301
Msa0709670	AT1G55690.1	45.387	401	160	7	13	362	22	414	1.72e-94	301
Msa0709670	AT1G55690.5	45.387	401	160	7	13	362	22	414	1.72e-94	301
Msa0709670	AT1G55690.3	45.387	401	160	7	13	362	22	414	2.19e-94	301
Msa0709670	AT2G16380.3	39.148	493	180	12	118	547	1	436	2.78e-93	293
Msa0709670	AT5G56160.2	45.482	332	126	4	23	304	19	345	4.93e-92	291
Msa0709670	AT5G56160.1	45.482	332	126	4	23	304	19	345	2.80e-91	292
Msa0709670	AT5G56160.3	45.482	332	126	4	23	304	19	345	2.80e-91	292
Msa0709670	AT2G18180.5	53.333	255	64	2	118	317	1	255	2.10e-90	285
Msa0709670	AT2G18180.5	53.731	67	31	0	475	541	370	436	5.20e-14	74.7
Msa0709670	AT5G47510.2	44.922	256	95	1	78	287	29	284	6.64e-75	242
Msa0709670	AT5G47510.1	44.922	256	95	1	78	287	28	283	1.52e-74	242
Msa0709670	AT5G47510.4	44.922	256	95	1	78	287	29	284	1.53e-74	242
Msa0709670	AT5G47510.3	43.805	226	81	1	108	287	2	227	2.07e-64	213

Find 117 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TACTATCACTTGCCTCTTCT+TGG	0.202570	5_1:-840699	None:intergenic
ATGAATCTTTGAAGTAGTTT+TGG	0.227191	5_1:-839917	None:intergenic
CAGTCATTAAAGAATCTTTA+TGG	0.230891	5_1:+841018	Msa0709670:CDS
TGAATGTTCCATTAGGTTCT+TGG	0.246980	5_1:+840046	Msa0709670:intron
GGAAAACCTTTAAAATGTTT+TGG	0.274087	5_1:-840284	None:intergenic
AGCATTTGATTTATATAAAC+TGG	0.287315	5_1:-841608	Msa0709680:intron
GTCTTGCCATGGCCCTTTAT+CGG	0.290544	5_1:-840262	None:intergenic
TTGTTCGAACAAAGGCAAAA+AGG	0.292384	5_1:-841101	None:intergenic
GGGGTTTGGCTTTGTGAATC+TGG	0.297857	5_1:-841169	None:intergenic
TAAATGCATCATGCAAATTA+AGG	0.298711	5_1:+838340	Msa0709670:CDS
AACCATGTGGATAGTACTTC+TGG	0.304122	5_1:-839001	None:intergenic
CATAGAATTCCCACATGCTT+TGG	0.329438	5_1:-840656	None:intergenic
AATGAGACAAGAAGAACTTT+TGG	0.329773	5_1:+841524	Msa0709670:CDS
GGCTGTATGACATCCGATAA+AGG	0.337655	5_1:+840249	Msa0709670:CDS
CAACTACCGCCTAGAAATTC+TGG	0.341995	5_1:-840207	None:intergenic
CTTGGACATGAGTCAGTATA+GGG	0.349834	5_1:-840681	None:intergenic
GATGATAAGTGGAAAAGAAT+TGG	0.351511	5_1:+838297	Msa0709670:CDS
AGTTACTTGCATAAGCCTAT+TGG	0.352097	5_1:-839084	None:intergenic
GTGTGACAAAGGGAGTAAAA+AGG	0.353499	5_1:+841133	Msa0709670:CDS
GTTACTTGCATAAGCCTATT+GGG	0.369599	5_1:-839083	None:intergenic
GGATGCAGAAAATCTGCTTT+TGG	0.376361	5_1:+841044	Msa0709670:CDS
AGTGAGCTACCAGAATTTCT+AGG	0.380292	5_1:+840198	Msa0709670:intron
TACCATAGTCTTTCCTCCAT+TGG	0.380545	5_1:-838822	None:intergenic
GGTGCTGCTTGCTTCTCCTT+TGG	0.389658	5_1:-840890	None:intergenic
CCTAGCCTCTCAATATAAAC+AGG	0.390737	5_1:-839050	None:intergenic
ATAGAATTCCCACATGCTTT+GGG	0.391941	5_1:-840655	None:intergenic
TCTTGGACATGAGTCAGTAT+AGG	0.395958	5_1:-840682	None:intergenic
AGCAGCTCCTCTTTCTCACT+TGG	0.399254	5_1:-841270	None:intergenic
CGAAACTCATTTGGCTCAAA+AGG	0.401215	5_1:+840914	Msa0709670:CDS
GAAACACTACTGATTATAGT+AGG	0.409598	5_1:+838246	Msa0709670:CDS
GTAGAAGATGAGGAGGGGTT+TGG	0.414982	5_1:-841183	None:intergenic
CTAGGCAAGATTTGTTGATA+AGG	0.428115	5_1:+840796	Msa0709670:intron
GCAAGATTTGTTGATAAGGT+TGG	0.435405	5_1:+840800	Msa0709670:CDS
TCAAGGTAAGTCAAAAGTTA+AGG	0.439797	5_1:+841577	Msa0709670:CDS
CTCCTCTTTCTCACTTGGCA+TGG	0.452012	5_1:-841265	None:intergenic
AAGCTCACTGAGGCGTTTCA+AGG	0.453754	5_1:-841205	None:intergenic
AAAAGTGGCTATACATCTAC+TGG	0.454005	5_1:+840598	Msa0709670:CDS
TACTATCCACATGGTTATCA+TGG	0.455469	5_1:+839008	Msa0709670:CDS
GCAGCACCACGAAACTCATT+TGG	0.462925	5_1:+840905	Msa0709670:CDS
TTTATCATCAATGCTGGTCC+TGG	0.464243	5_1:+839853	Msa0709670:CDS
ATCCAATGGAGGAAAGACTA+TGG	0.472951	5_1:+838820	Msa0709670:CDS
TTTGAGCCAAATGAGTTTCG+TGG	0.473382	5_1:-840911	None:intergenic
GTTGATAAGGTTGGTCATAC+CGG	0.475173	5_1:+840809	Msa0709670:CDS
GGTAACCAGGACTGTTACAG+TGG	0.476374	5_1:+841065	Msa0709670:CDS
GTCGAACATCCTCAATGGAC+AGG	0.479812	5_1:-838416	None:intergenic
ATGACTATCATATGTTATTG+AGG	0.481600	5_1:+838514	Msa0709670:CDS
TTGAGAAAGCAAAGCTTATG+TGG	0.482104	5_1:+838788	Msa0709670:CDS
GCTGTATGACATCCGATAAA+GGG	0.483951	5_1:+840250	Msa0709670:CDS
GATGAGTTCTCGAGCAGACT+TGG	0.484272	5_1:-839492	None:intergenic
TCGTAACAATTTCCAACGAC+GGG	0.488552	5_1:+840443	Msa0709670:CDS
AGAGTTCAGAGGATGATAAG+TGG	0.489773	5_1:+838286	Msa0709670:CDS
ATCAATAATCTTGTCAACCA+TGG	0.500918	5_1:-840861	None:intergenic
TAGGAAAAGTTGATCCCAAT+AGG	0.504043	5_1:+839069	Msa0709670:CDS
TGCCATGCCAAGTGAGAAAG+AGG	0.504746	5_1:+841263	Msa0709670:CDS
GTTGACAAGATTATTGATGT+TGG	0.506685	5_1:+840866	Msa0709670:CDS
TTTCCTCCATTGGATCATGT+TGG	0.513399	5_1:-838812	None:intergenic
TGATAGTCATCATGTATTGA+AGG	0.523730	5_1:-838501	None:intergenic
ATTAAAGAATCTTTATGGCA+TGG	0.524086	5_1:+841023	Msa0709670:CDS
AACTTGTCGAACATCCTCAA+TGG	0.528444	5_1:-838421	None:intergenic
CCTGTTTATATTGAGAGGCT+AGG	0.536718	5_1:+839050	Msa0709670:CDS
GTTGTAGATTCTTGAAAGCA+AGG	0.537683	5_1:+838755	Msa0709670:intron
CAAATGTTTATCATCAATGC+TGG	0.541743	5_1:+839847	Msa0709670:CDS
GTGATAGTACATTAATTACA+AGG	0.553558	5_1:+840713	Msa0709670:CDS
TGGTACAGATACAATTATAG+AGG	0.554834	5_1:+838840	Msa0709670:CDS
TGAGGATGTTCGACAAGTTG+AGG	0.556408	5_1:+838425	Msa0709670:CDS
TGGTTATCATGGTGTGGACA+AGG	0.560676	5_1:+839019	Msa0709670:CDS
TAACAATTTCCAACGACGGG+GGG	0.562654	5_1:+840446	Msa0709670:CDS
ATAGCATTTCGTGTGACAAA+GGG	0.564103	5_1:+841123	Msa0709670:CDS
AATAGCATTTCGTGTGACAA+AGG	0.565114	5_1:+841122	Msa0709670:CDS
TCAATAATCTTGTCAACCAT+GGG	0.565693	5_1:-840860	None:intergenic
GATTATTGATGTTGGACCAA+AGG	0.573610	5_1:+840874	Msa0709670:CDS
ATTCCCACATGCTTTGGGAG+AGG	0.576118	5_1:-840650	None:intergenic
TTTGGCATACATAGACAGTC+GGG	0.579008	5_1:+841542	Msa0709670:CDS
AGAGCTCATTGCTACAAAGA+AGG	0.579053	5_1:+841329	Msa0709670:CDS
GCAGCAAAAGTAGTGGCAGT+AGG	0.581849	5_1:+838385	Msa0709670:CDS
GGAACATATTCATCATACTC+AGG	0.584478	5_1:-840839	None:intergenic
GAAGACCTGTTTATATTGAG+AGG	0.585453	5_1:+839045	Msa0709670:CDS
GCGTTTCAAGGTAGAAGATG+AGG	0.585982	5_1:-841193	None:intergenic
ATCACCTCTCCCAAAGCATG+TGG	0.587564	5_1:+840646	Msa0709670:CDS
AACAATTTCCAACGACGGGG+GGG	0.590029	5_1:+840447	Msa0709670:CDS
GATGCCCACTGTAACAGTCC+TGG	0.590148	5_1:-841070	None:intergenic
AAATGCTATTGTTCGAACAA+AGG	0.593799	5_1:-841109	None:intergenic
TGCATGCAGATGGTTCTTAG+TGG	0.596223	5_1:+840397	Msa0709670:intron
TGTGGGCCAACATGATCCAA+TGG	0.599513	5_1:+838806	Msa0709670:CDS
GAGCAATTCCCTGTCCATTG+AGG	0.600815	5_1:+838407	Msa0709670:CDS
TACTTGAGATTATCGATGCG+AGG	0.602427	5_1:+840089	Msa0709670:CDS
ACTGACTCATGTCCAAGAAG+AGG	0.602573	5_1:+840687	Msa0709670:CDS
AGTTTATCGTGTGGATGCAT+TGG	0.603746	5_1:+841302	Msa0709670:CDS
ATCGTAACAATTTCCAACGA+CGG	0.608081	5_1:+840442	Msa0709670:CDS
TCCTAAACAGGCTTTGTACG+AGG	0.609326	5_1:+841497	Msa0709670:intron
GATAAGGTTGGTCATACCGG+TGG	0.614668	5_1:+840812	Msa0709670:CDS
TGACATCCGATAAAGGGCCA+TGG	0.616150	5_1:+840256	Msa0709670:CDS
TTCAAGGTAGAAGATGAGGA+GGG	0.616304	5_1:-841189	None:intergenic
TCAAGGTAGAAGATGAGGAG+GGG	0.617122	5_1:-841188	None:intergenic
AAAAGAAGCAGCAAAAGTAG+TGG	0.618855	5_1:+838378	Msa0709670:CDS
TCCACATGGTTATCATGGTG+TGG	0.619712	5_1:+839013	Msa0709670:CDS
TCGAACATCCTCAATGGACA+GGG	0.623693	5_1:-838415	None:intergenic
ATCATACTCAGGAAAACCAC+CGG	0.629075	5_1:-840828	None:intergenic
TGAAAGAAGAGAGAGTTCAG+AGG	0.630165	5_1:+838275	Msa0709670:CDS
TTTCAAGGTAGAAGATGAGG+AGG	0.637871	5_1:-841190	None:intergenic
TGAGAAAGCAAAGCTTATGT+GGG	0.641603	5_1:+838789	Msa0709670:CDS
GTAACAATTTCCAACGACGG+GGG	0.643422	5_1:+840445	Msa0709670:CDS
TTCCATAGAAGCTTAAAACC+AGG	0.645111	5_1:-839871	None:intergenic
TATCATGGTGTGGACAAGGA+GGG	0.652614	5_1:+839023	Msa0709670:CDS
TAATCTCAAGTAATTTACTG+TGG	0.654334	5_1:-840078	None:intergenic
GTATGATGAATATGTTCCCA+TGG	0.657630	5_1:+840844	Msa0709670:CDS
CGTAACAATTTCCAACGACG+GGG	0.667892	5_1:+840444	Msa0709670:CDS
GTAACCAGGACTGTTACAGT+GGG	0.670798	5_1:+841066	Msa0709670:CDS
TGCACCTGTGTAGATCATGA+TGG	0.672539	5_1:+840228	Msa0709670:CDS
GTCCAGAAGTACTATCCACA+TGG	0.674124	5_1:+838999	Msa0709670:CDS
TCACCTCTCCCAAAGCATGT+GGG	0.674728	5_1:+840647	Msa0709670:CDS
TTATCATGGTGTGGACAAGG+AGG	0.685438	5_1:+839022	Msa0709670:CDS
GAATGCTGCAGTTTATCGTG+TGG	0.686694	5_1:+841293	Msa0709670:CDS
GGGCCAACATGATCCAATGG+AGG	0.693515	5_1:+838809	Msa0709670:CDS
ACAGCCATCATGATCTACAC+AGG	0.695056	5_1:-840232	None:intergenic
TCCACACCATGATAACCATG+TGG	0.713264	5_1:-839014	None:intergenic
GAGCTACCAGAATTTCTAGG+CGG	0.787653	5_1:+840201	Msa0709670:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAATTAATTTAAAATTAATA+TGG	-	chr5_1:839411-839430	None:intergenic	0.0%
!!!	ATATTAATTTTAAATTAATT+AGG	+	chr5_1:839410-839429	Msa0709670:intron	0.0%
!!!	AATTTTTCAATTAATTTTCA+TGG	-	chr5_1:838584-838603	None:intergenic	10.0%
!!!	AATTAATTGAAAAATTGTTT+TGG	+	chr5_1:838588-838607	Msa0709670:intron	10.0%
!!!	ACTCTTTTTTTTTTCATATT+TGG	+	chr5_1:838916-838935	Msa0709670:intron	15.0%
!!!	ATTTTTATAAGATTCCATTG+AGG	+	chr5_1:839979-839998	Msa0709670:intron	20.0%
!!	TATTTCAGGAAAATACATAA+GGG	-	chr5_1:840011-840030	None:intergenic	20.0%
!!	TTATTTCAGGAAAATACATA+AGG	-	chr5_1:840012-840031	None:intergenic	20.0%
!!	TTTCAATTCATCATTATTTC+AGG	-	chr5_1:840025-840044	None:intergenic	20.0%
!!	TTCCACTTATTATTAATCAT+AGG	+	chr5_1:840303-840322	Msa0709670:intron	20.0%
!!	ATCCTATGATTAATAATAAG+TGG	-	chr5_1:840308-840327	None:intergenic	20.0%
!!!	TATTTAGGTTCCATTTATAT+TGG	+	chr5_1:840966-840985	Msa0709670:intron	20.0%
!!!	TTAAGAACTTCTTTAACTTT+AGG	+	chr5_1:841412-841431	Msa0709670:intron	20.0%
!	TAAATGCATCATGCAAATTA+AGG	+	chr5_1:838340-838359	Msa0709670:CDS	25.0%
!	ATGACTATCATATGTTATTG+AGG	+	chr5_1:838514-838533	Msa0709670:CDS	25.0%
!!!	TACTATGGTTTTTTCTCTAT+AGG	+	chr5_1:838950-838969	Msa0709670:intron	25.0%
!!!	TCTATAGGATTTTGATTTCA+AGG	+	chr5_1:838965-838984	Msa0709670:intron	25.0%
!	TTAGAGCTTCAATTAAATCA+TGG	-	chr5_1:839304-839323	None:intergenic	25.0%
!	TATCTTATTCTACATACTTC+AGG	-	chr5_1:839551-839570	None:intergenic	25.0%
!	TCAGTTACATATCTTAAATG+AGG	-	chr5_1:839808-839827	None:intergenic	25.0%
!!!	TGAATCTTTGAAGTAGTTTT+GGG	-	chr5_1:839919-839938	None:intergenic	25.0%
!!!	ATGAATCTTTGAAGTAGTTT+TGG	-	chr5_1:839920-839939	None:intergenic	25.0%
!	TTGAAATTGAATGTTCCATT+AGG	+	chr5_1:840039-840058	Msa0709670:intron	25.0%
!	TAATCTCAAGTAATTTACTG+TGG	-	chr5_1:840081-840100	None:intergenic	25.0%
!!!	GGAAAACCTTTAAAATGTTT+TGG	-	chr5_1:840287-840306	None:intergenic	25.0%
!!	TGATAAAACATCTTTTCCAA+AGG	+	chr5_1:840480-840499	Msa0709670:CDS	25.0%
!!	TGCTATAATCCTTTGAATTT+TGG	+	chr5_1:840559-840578	Msa0709670:intron	25.0%
!	GTGATAGTACATTAATTACA+AGG	+	chr5_1:840713-840732	Msa0709670:CDS	25.0%
!	ATAGGTTTATACTACAGATT+AGG	+	chr5_1:840942-840961	Msa0709670:intron	25.0%
!	TACTACAGATTAGGATATTT+AGG	+	chr5_1:840951-840970	Msa0709670:intron	25.0%
!	TGTTTGACATCCAATATAAA+TGG	-	chr5_1:840979-840998	None:intergenic	25.0%
!	CAGTCATTAAAGAATCTTTA+TGG	+	chr5_1:841018-841037	Msa0709670:CDS	25.0%
!	ATTAAAGAATCTTTATGGCA+TGG	+	chr5_1:841023-841042	Msa0709670:CDS	25.0%
!	GAAACACTACTGATTATAGT+AGG	+	chr5_1:838246-838265	Msa0709670:CDS	30.0%
	GATGATAAGTGGAAAAGAAT+TGG	+	chr5_1:838297-838316	Msa0709670:CDS	30.0%
	TGATAGTCATCATGTATTGA+AGG	-	chr5_1:838504-838523	None:intergenic	30.0%
	ACATAGCAAGTAAAGCATAA+TGG	-	chr5_1:838547-838566	None:intergenic	30.0%
	ATGAATATGCAAAGAGATCT+AGG	-	chr5_1:838684-838703	None:intergenic	30.0%
	GTATGATATTGCATATTGAC+TGG	+	chr5_1:838705-838724	Msa0709670:intron	30.0%
	TGGTACAGATACAATTATAG+AGG	+	chr5_1:838840-838859	Msa0709670:CDS	30.0%
!	TTGGTGTTCATACTATACTA+TGG	+	chr5_1:838935-838954	Msa0709670:intron	30.0%
	GTATCTCAAATATCTTTCCA+TGG	-	chr5_1:839111-839130	None:intergenic	30.0%
!	ACAACAATTTTGGATGTTCA+AGG	+	chr5_1:839212-839231	Msa0709670:intron	30.0%
	TTGAAACCCTATAAAGCAAA+GGG	-	chr5_1:839464-839483	None:intergenic	30.0%
!	TTTGAAACCCTATAAAGCAA+AGG	-	chr5_1:839465-839484	None:intergenic	30.0%
!	TTAGACATAGTTCCTTGTTT+AGG	-	chr5_1:839739-839758	None:intergenic	30.0%
	CAAATGTTTATCATCAATGC+TGG	+	chr5_1:839847-839866	Msa0709670:CDS	30.0%
!!	TCAACATTTGGTTCTGTTAT+TGG	+	chr5_1:840116-840135	Msa0709670:intron	30.0%
!	GCAAGACCAAAACATTTTAA+AGG	+	chr5_1:840278-840297	Msa0709670:CDS	30.0%
	ATTCATACTACATCTTAACC+TGG	+	chr5_1:840326-840345	Msa0709670:intron	30.0%
	GAAATGAAAAACTGTACCTT+TGG	-	chr5_1:840499-840518	None:intergenic	30.0%
	ACTCAGTAACCAAAATTCAA+AGG	-	chr5_1:840571-840590	None:intergenic	30.0%
!!!	AACTGTTTTTATACTCGTCT+AGG	+	chr5_1:840778-840797	Msa0709670:intron	30.0%
	TCAATAATCTTGTCAACCAT+GGG	-	chr5_1:840863-840882	None:intergenic	30.0%
	ATCAATAATCTTGTCAACCA+TGG	-	chr5_1:840864-840883	None:intergenic	30.0%
	GTTGACAAGATTATTGATGT+TGG	+	chr5_1:840866-840885	Msa0709670:CDS	30.0%
	AAATGCTATTGTTCGAACAA+AGG	-	chr5_1:841112-841131	None:intergenic	30.0%
!	AATGAGACAAGAAGAACTTT+TGG	+	chr5_1:841524-841543	Msa0709670:CDS	30.0%
	TCAAGGTAAGTCAAAAGTTA+AGG	+	chr5_1:841577-841596	Msa0709670:CDS	30.0%
	AAAAGAAGCAGCAAAAGTAG+TGG	+	chr5_1:838378-838397	Msa0709670:CDS	35.0%
	GCTTATGAGAACTTATCTAC+TGG	-	chr5_1:838648-838667	None:intergenic	35.0%
!	TGATATTGCATATTGACTGG+TGG	+	chr5_1:838708-838727	Msa0709670:intron	35.0%
	GTTGTAGATTCTTGAAAGCA+AGG	+	chr5_1:838755-838774	Msa0709670:intron	35.0%
	TTGAGAAAGCAAAGCTTATG+TGG	+	chr5_1:838788-838807	Msa0709670:CDS	35.0%
	TGAGAAAGCAAAGCTTATGT+GGG	+	chr5_1:838789-838808	Msa0709670:CDS	35.0%
	TACTATCCACATGGTTATCA+TGG	+	chr5_1:839008-839027	Msa0709670:CDS	35.0%
	GAAGACCTGTTTATATTGAG+AGG	+	chr5_1:839045-839064	Msa0709670:CDS	35.0%
!	TAGGAAAAGTTGATCCCAAT+AGG	+	chr5_1:839069-839088	Msa0709670:CDS	35.0%
	GTTACTTGCATAAGCCTATT+GGG	-	chr5_1:839086-839105	None:intergenic	35.0%
	AGTTACTTGCATAAGCCTAT+TGG	-	chr5_1:839087-839106	None:intergenic	35.0%
!	ATATTTGAGATACCATGTGC+AGG	+	chr5_1:839118-839137	Msa0709670:intron	35.0%
!	TATTTGAGATACCATGTGCA+GGG	+	chr5_1:839119-839138	Msa0709670:intron	35.0%
	AACATCCAAAATTGTTGTGC+TGG	-	chr5_1:839210-839229	None:intergenic	35.0%
	GTTTAGATTGACAGTGAGTA+TGG	+	chr5_1:839262-839281	Msa0709670:intron	35.0%
	TGGACTAATGGTGAATTTAG+CGG	-	chr5_1:839344-839363	None:intergenic	35.0%
	TCTTCTTCCCTTTGCTTTAT+AGG	+	chr5_1:839454-839473	Msa0709670:intron	35.0%
	CTTCTTCCCTTTGCTTTATA+GGG	+	chr5_1:839455-839474	Msa0709670:intron	35.0%
	TTCCATAGAAGCTTAAAACC+AGG	-	chr5_1:839874-839893	None:intergenic	35.0%
	TGAATGTTCCATTAGGTTCT+TGG	+	chr5_1:840046-840065	Msa0709670:intron	35.0%
	ACTTGTTTCCAAGAACCTAA+TGG	-	chr5_1:840057-840076	None:intergenic	35.0%
!!!	AAAATGTTTTGGTCTTGCCA+TGG	-	chr5_1:840276-840295	None:intergenic	35.0%
!!	CTACATCTTAACCTGGTTTT+TGG	+	chr5_1:840333-840352	Msa0709670:intron	35.0%
	ATCGTAACAATTTCCAACGA+CGG	+	chr5_1:840442-840461	Msa0709670:CDS	35.0%
!!!	GAATTTTGGTTACTGAGTAC+AGG	+	chr5_1:840573-840592	Msa0709670:intron	35.0%
	AAAAGTGGCTATACATCTAC+TGG	+	chr5_1:840598-840617	Msa0709670:CDS	35.0%
	ATAGAATTCCCACATGCTTT+GGG	-	chr5_1:840658-840677	None:intergenic	35.0%
!!	CTAGGCAAGATTTGTTGATA+AGG	+	chr5_1:840796-840815	Msa0709670:intron	35.0%
!!	GCAAGATTTGTTGATAAGGT+TGG	+	chr5_1:840800-840819	Msa0709670:CDS	35.0%
	GGAACATATTCATCATACTC+AGG	-	chr5_1:840842-840861	None:intergenic	35.0%
	GTATGATGAATATGTTCCCA+TGG	+	chr5_1:840844-840863	Msa0709670:CDS	35.0%
	GATTATTGATGTTGGACCAA+AGG	+	chr5_1:840874-840893	Msa0709670:CDS	35.0%
!!	AAAATCTGCTTTTGGTAACC+AGG	+	chr5_1:841052-841071	Msa0709670:CDS	35.0%
	TGTTCGAACAAAGGCAAAAA+GGG	-	chr5_1:841103-841122	None:intergenic	35.0%
	TTGTTCGAACAAAGGCAAAA+AGG	-	chr5_1:841104-841123	None:intergenic	35.0%
	AATAGCATTTCGTGTGACAA+AGG	+	chr5_1:841122-841141	Msa0709670:CDS	35.0%
	ATAGCATTTCGTGTGACAAA+GGG	+	chr5_1:841123-841142	Msa0709670:CDS	35.0%
	TGTGACAAAGGGAGTAAAAA+GGG	+	chr5_1:841134-841153	Msa0709670:CDS	35.0%
!!!	CATTTTTTTCAAGCTCACTG+AGG	-	chr5_1:841218-841237	None:intergenic	35.0%
	AGAAGTTCTTAACAATGACG+TGG	-	chr5_1:841404-841423	None:intergenic	35.0%
	GCATGTTCAATTTCCTAAAC+AGG	+	chr5_1:841485-841504	Msa0709670:intron	35.0%
!	TTTTGGCATACATAGACAGT+CGG	+	chr5_1:841541-841560	Msa0709670:CDS	35.0%
	TCGGGAAAAAAGCAAATTCA+AGG	+	chr5_1:841560-841579	Msa0709670:CDS	35.0%
	TGAAAGAAGAGAGAGTTCAG+AGG	+	chr5_1:838275-838294	Msa0709670:CDS	40.0%
	AGAGTTCAGAGGATGATAAG+TGG	+	chr5_1:838286-838305	Msa0709670:CDS	40.0%
	AACTTGTCGAACATCCTCAA+TGG	-	chr5_1:838424-838443	None:intergenic	40.0%
	TTTCCTCCATTGGATCATGT+TGG	-	chr5_1:838815-838834	None:intergenic	40.0%
	ATCCAATGGAGGAAAGACTA+TGG	+	chr5_1:838820-838839	Msa0709670:CDS	40.0%
	TACCATAGTCTTTCCTCCAT+TGG	-	chr5_1:838825-838844	None:intergenic	40.0%
	AACCATGTGGATAGTACTTC+TGG	-	chr5_1:839004-839023	None:intergenic	40.0%
	CCTAGCCTCTCAATATAAAC+AGG	-	chr5_1:839053-839072	None:intergenic	40.0%
	CCTGTTTATATTGAGAGGCT+AGG	+	chr5_1:839050-839069	Msa0709670:CDS	40.0%
	GCTTATGCAAGTAACTACCA+TGG	+	chr5_1:839091-839110	Msa0709670:intron	40.0%
!	TTTTCTCAAAACCCTGCACA+TGG	-	chr5_1:839133-839152	None:intergenic	40.0%
	ATAGCTGCTAAGAGACACAT+AGG	+	chr5_1:839182-839201	Msa0709670:intron	40.0%
!	AGGTTCCAGCACAACAATTT+TGG	+	chr5_1:839202-839221	Msa0709670:intron	40.0%
!	AATTTTGGATGTTCAAGGCG+TGG	+	chr5_1:839217-839236	Msa0709670:intron	40.0%
	CAGTGAGTATGGCTTAATCA+TGG	+	chr5_1:839273-839292	Msa0709670:intron	40.0%
	TGAGTATGGCTTAATCATGG+CGG	+	chr5_1:839276-839295	Msa0709670:intron	40.0%
	AGTGCATGACTTTGGACTAA+TGG	-	chr5_1:839356-839375	None:intergenic	40.0%
	GTCCAAAGTCATGCACTAAA+TGG	+	chr5_1:839359-839378	Msa0709670:intron	40.0%
	AGCCATTTAGTGCATGACTT+TGG	-	chr5_1:839364-839383	None:intergenic	40.0%
	TTGAGAAGCTCACCTAAACA+AGG	+	chr5_1:839724-839743	Msa0709670:intron	40.0%
	TTTATCATCAATGCTGGTCC+TGG	+	chr5_1:839853-839872	Msa0709670:CDS	40.0%
!!!	GTCCTGGTTTTAAGCTTCTA+TGG	+	chr5_1:839869-839888	Msa0709670:CDS	40.0%
	CATAAGGGTTCTTACCTCAA+TGG	-	chr5_1:839996-840015	None:intergenic	40.0%
	TACTTGAGATTATCGATGCG+AGG	+	chr5_1:840089-840108	Msa0709670:CDS	40.0%
	ATGCGAGGTAACTCAACATT+TGG	+	chr5_1:840104-840123	Msa0709670:intron	40.0%
	AGTGAGCTACCAGAATTTCT+AGG	+	chr5_1:840198-840217	Msa0709670:intron	40.0%
	GCTGTATGACATCCGATAAA+GGG	+	chr5_1:840250-840269	Msa0709670:CDS	40.0%
	GCAAAGTAGAACCAAAAACC+AGG	-	chr5_1:840347-840366	None:intergenic	40.0%
	AATAGTTGTCTGCATGCAGA+TGG	+	chr5_1:840387-840406	Msa0709670:intron	40.0%
	TCGTAACAATTTCCAACGAC+GGG	+	chr5_1:840443-840462	Msa0709670:CDS	40.0%
	TACTGAGTACAGGCAAAAAG+TGG	+	chr5_1:840583-840602	Msa0709670:intron	40.0%
	CATAGAATTCCCACATGCTT+TGG	-	chr5_1:840659-840678	None:intergenic	40.0%
	CTTGGACATGAGTCAGTATA+GGG	-	chr5_1:840684-840703	None:intergenic	40.0%
	TCTTGGACATGAGTCAGTAT+AGG	-	chr5_1:840685-840704	None:intergenic	40.0%
	TACTATCACTTGCCTCTTCT+TGG	-	chr5_1:840702-840721	None:intergenic	40.0%
!	GTTGATAAGGTTGGTCATAC+CGG	+	chr5_1:840809-840828	Msa0709670:CDS	40.0%
	ATCATACTCAGGAAAACCAC+CGG	-	chr5_1:840831-840850	None:intergenic	40.0%
	TTTGAGCCAAATGAGTTTCG+TGG	-	chr5_1:840914-840933	None:intergenic	40.0%
!	CGAAACTCATTTGGCTCAAA+AGG	+	chr5_1:840914-840933	Msa0709670:CDS	40.0%
	TTGGCTCAAAAGGTGAGAAT+AGG	+	chr5_1:840924-840943	Msa0709670:intron	40.0%
!	GGATGCAGAAAATCTGCTTT+TGG	+	chr5_1:841044-841063	Msa0709670:CDS	40.0%
	GTGTGACAAAGGGAGTAAAA+AGG	+	chr5_1:841133-841152	Msa0709670:CDS	40.0%
	TTCAAGGTAGAAGATGAGGA+GGG	-	chr5_1:841192-841211	None:intergenic	40.0%
	TTTCAAGGTAGAAGATGAGG+AGG	-	chr5_1:841193-841212	None:intergenic	40.0%
	AGTTTATCGTGTGGATGCAT+TGG	+	chr5_1:841302-841321	Msa0709670:CDS	40.0%
	AGAGCTCATTGCTACAAAGA+AGG	+	chr5_1:841329-841348	Msa0709670:CDS	40.0%
	TTTGGCATACATAGACAGTC+GGG	+	chr5_1:841542-841561	Msa0709670:CDS	40.0%
	TCGAACATCCTCAATGGACA+GGG	-	chr5_1:838418-838437	None:intergenic	45.0%
	TGAGGATGTTCGACAAGTTG+AGG	+	chr5_1:838425-838444	Msa0709670:CDS	45.0%
!	GCATATTGACTGGTGGAATG+TGG	+	chr5_1:838715-838734	Msa0709670:intron	45.0%
!!	GTCCAGAAGTACTATCCACA+TGG	+	chr5_1:838999-839018	Msa0709670:CDS	45.0%
	TCCACATGGTTATCATGGTG+TGG	+	chr5_1:839013-839032	Msa0709670:CDS	45.0%
	TCCACACCATGATAACCATG+TGG	-	chr5_1:839017-839036	None:intergenic	45.0%
	TGGTTATCATGGTGTGGACA+AGG	+	chr5_1:839019-839038	Msa0709670:CDS	45.0%
	TTATCATGGTGTGGACAAGG+AGG	+	chr5_1:839022-839041	Msa0709670:CDS	45.0%
	TATCATGGTGTGGACAAGGA+GGG	+	chr5_1:839023-839042	Msa0709670:CDS	45.0%
	TTAGCAGCTATAGAGCAAGC+TGG	-	chr5_1:839173-839192	None:intergenic	45.0%
	GCTCACTGAGAACTTATAGC+TGG	-	chr5_1:840185-840204	None:intergenic	45.0%
!	GAGCTACCAGAATTTCTAGG+CGG	+	chr5_1:840201-840220	Msa0709670:CDS	45.0%
	CAACTACCGCCTAGAAATTC+TGG	-	chr5_1:840210-840229	None:intergenic	45.0%
	TGCACCTGTGTAGATCATGA+TGG	+	chr5_1:840228-840247	Msa0709670:CDS	45.0%
	ACAGCCATCATGATCTACAC+AGG	-	chr5_1:840235-840254	None:intergenic	45.0%
	GGCTGTATGACATCCGATAA+AGG	+	chr5_1:840249-840268	Msa0709670:CDS	45.0%
	TGCATGCAGATGGTTCTTAG+TGG	+	chr5_1:840397-840416	Msa0709670:intron	45.0%
	CGTAACAATTTCCAACGACG+GGG	+	chr5_1:840444-840463	Msa0709670:CDS	45.0%
	GTAACAATTTCCAACGACGG+GGG	+	chr5_1:840445-840464	Msa0709670:CDS	45.0%
	TAACAATTTCCAACGACGGG+GGG	+	chr5_1:840446-840465	Msa0709670:CDS	45.0%
!	ACTGACTCATGTCCAAGAAG+AGG	+	chr5_1:840687-840706	Msa0709670:CDS	45.0%
	GTAACCAGGACTGTTACAGT+GGG	+	chr5_1:841066-841085	Msa0709670:CDS	45.0%
	GACAAAGGGAGTAAAAAGGG+AGG	+	chr5_1:841137-841156	Msa0709670:CDS	45.0%
	TCAAGGTAGAAGATGAGGAG+GGG	-	chr5_1:841191-841210	None:intergenic	45.0%
	GCGTTTCAAGGTAGAAGATG+AGG	-	chr5_1:841196-841215	None:intergenic	45.0%
	GAATGCTGCAGTTTATCGTG+TGG	+	chr5_1:841293-841312	Msa0709670:CDS	45.0%
!	TCCTAAACAGGCTTTGTACG+AGG	+	chr5_1:841497-841516	Msa0709670:intron	45.0%
	GCAGCAAAAGTAGTGGCAGT+AGG	+	chr5_1:838385-838404	Msa0709670:CDS	50.0%
	GAGCAATTCCCTGTCCATTG+AGG	+	chr5_1:838407-838426	Msa0709670:CDS	50.0%
	GTCGAACATCCTCAATGGAC+AGG	-	chr5_1:838419-838438	None:intergenic	50.0%
	TGACTGGTGGAATGTGGACA+TGG	+	chr5_1:838721-838740	Msa0709670:intron	50.0%
	TGTGGGCCAACATGATCCAA+TGG	+	chr5_1:838806-838825	Msa0709670:CDS	50.0%
	GATGAGTTCTCGAGCAGACT+TGG	-	chr5_1:839495-839514	None:intergenic	50.0%
	TGACATCCGATAAAGGGCCA+TGG	+	chr5_1:840256-840275	Msa0709670:CDS	50.0%
	GTCTTGCCATGGCCCTTTAT+CGG	-	chr5_1:840265-840284	None:intergenic	50.0%
	AACAATTTCCAACGACGGGG+GGG	+	chr5_1:840447-840466	Msa0709670:CDS	50.0%
	ATCACCTCTCCCAAAGCATG+TGG	+	chr5_1:840646-840665	Msa0709670:CDS	50.0%
	TCACCTCTCCCAAAGCATGT+GGG	+	chr5_1:840647-840666	Msa0709670:CDS	50.0%
!!	ATTCCCACATGCTTTGGGAG+AGG	-	chr5_1:840653-840672	None:intergenic	50.0%
!	GATAAGGTTGGTCATACCGG+TGG	+	chr5_1:840812-840831	Msa0709670:CDS	50.0%
	GCAGCACCACGAAACTCATT+TGG	+	chr5_1:840905-840924	Msa0709670:CDS	50.0%
	GGTAACCAGGACTGTTACAG+TGG	+	chr5_1:841065-841084	Msa0709670:CDS	50.0%
!!	GGGGTTTGGCTTTGTGAATC+TGG	-	chr5_1:841172-841191	None:intergenic	50.0%
	GTAGAAGATGAGGAGGGGTT+TGG	-	chr5_1:841186-841205	None:intergenic	50.0%
!	AAGCTCACTGAGGCGTTTCA+AGG	-	chr5_1:841208-841227	None:intergenic	50.0%
	TGCCATGCCAAGTGAGAAAG+AGG	+	chr5_1:841263-841282	Msa0709670:CDS	50.0%
	CTCCTCTTTCTCACTTGGCA+TGG	-	chr5_1:841268-841287	None:intergenic	50.0%
	AGCAGCTCCTCTTTCTCACT+TGG	-	chr5_1:841273-841292	None:intergenic	50.0%
	GCCTCGTACAAAGCCTGTTT+AGG	-	chr5_1:841501-841520	None:intergenic	50.0%
	GGGCCAACATGATCCAATGG+AGG	+	chr5_1:838809-838828	Msa0709670:CDS	55.0%
!!	GGTGCTGCTTGCTTCTCCTT+TGG	-	chr5_1:840893-840912	None:intergenic	55.0%
	GATGCCCACTGTAACAGTCC+TGG	-	chr5_1:841073-841092	None:intergenic	55.0%
	TTCAATCACCCCCCCGTCGT+TGG	-	chr5_1:840458-840477	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_1	gene	838173	841620	838173	ID=Msa0709670;Name=Msa0709670
chr5_1	mRNA	838173	841620	838173	ID=Msa0709670-mRNA-1;Parent=Msa0709670;Name=Msa0709670-mRNA-1;_AED=0.27;_eAED=0.27;_QI=55\|0.72\|0.66\|1\|0.81\|0.83\|12\|0\|561
chr5_1	exon	838173	838535	838173	ID=Msa0709670-mRNA-1:exon:404;Parent=Msa0709670-mRNA-1
chr5_1	exon	838762	838861	838762	ID=Msa0709670-mRNA-1:exon:405;Parent=Msa0709670-mRNA-1
chr5_1	exon	838972	839100	838972	ID=Msa0709670-mRNA-1:exon:406;Parent=Msa0709670-mRNA-1
chr5_1	exon	839476	839553	839476	ID=Msa0709670-mRNA-1:exon:407;Parent=Msa0709670-mRNA-1
chr5_1	exon	839838	839939	839838	ID=Msa0709670-mRNA-1:exon:408;Parent=Msa0709670-mRNA-1
chr5_1	exon	840061	840110	840061	ID=Msa0709670-mRNA-1:exon:409;Parent=Msa0709670-mRNA-1
chr5_1	exon	840200	840299	840200	ID=Msa0709670-mRNA-1:exon:410;Parent=Msa0709670-mRNA-1
chr5_1	exon	840406	840501	840406	ID=Msa0709670-mRNA-1:exon:411;Parent=Msa0709670-mRNA-1
chr5_1	exon	840595	840734	840595	ID=Msa0709670-mRNA-1:exon:412;Parent=Msa0709670-mRNA-1
chr5_1	exon	840800	840935	840800	ID=Msa0709670-mRNA-1:exon:413;Parent=Msa0709670-mRNA-1
chr5_1	exon	841018	841350	841018	ID=Msa0709670-mRNA-1:exon:414;Parent=Msa0709670-mRNA-1
chr5_1	exon	841507	841620	841507	ID=Msa0709670-mRNA-1:exon:415;Parent=Msa0709670-mRNA-1
chr5_1	five_prime_UTR	838173	838227	838173	ID=Msa0709670-mRNA-1:five_prime_utr;Parent=Msa0709670-mRNA-1
chr5_1	CDS	838228	838535	838228	ID=Msa0709670-mRNA-1:cds;Parent=Msa0709670-mRNA-1
chr5_1	CDS	838762	838861	838762	ID=Msa0709670-mRNA-1:cds;Parent=Msa0709670-mRNA-1
chr5_1	CDS	838972	839100	838972	ID=Msa0709670-mRNA-1:cds;Parent=Msa0709670-mRNA-1
chr5_1	CDS	839476	839553	839476	ID=Msa0709670-mRNA-1:cds;Parent=Msa0709670-mRNA-1
chr5_1	CDS	839838	839939	839838	ID=Msa0709670-mRNA-1:cds;Parent=Msa0709670-mRNA-1
chr5_1	CDS	840061	840110	840061	ID=Msa0709670-mRNA-1:cds;Parent=Msa0709670-mRNA-1
chr5_1	CDS	840200	840299	840200	ID=Msa0709670-mRNA-1:cds;Parent=Msa0709670-mRNA-1
chr5_1	CDS	840406	840501	840406	ID=Msa0709670-mRNA-1:cds;Parent=Msa0709670-mRNA-1
chr5_1	CDS	840595	840734	840595	ID=Msa0709670-mRNA-1:cds;Parent=Msa0709670-mRNA-1
chr5_1	CDS	840800	840935	840800	ID=Msa0709670-mRNA-1:cds;Parent=Msa0709670-mRNA-1
chr5_1	CDS	841018	841350	841018	ID=Msa0709670-mRNA-1:cds;Parent=Msa0709670-mRNA-1
chr5_1	CDS	841507	841620	841507	ID=Msa0709670-mRNA-1:cds;Parent=Msa0709670-mRNA-1

Gene Sequence

>Msa0709670

ATGAATTATGACACTTTTGAAACACTACTGATTATAGTAGGCAACGATGAAAGAAGAGAGAGTTCAGAGGATGATAAGTGGAAAAGAATTGGAAGTCTTAAAAAGAAAGCAATAAATGCATCATGCAAATTAAGGCATTCTCTTAAGAAGAAAAGAAGCAGCAAAAGTAGTGGCAGTAGGAGCAATTCCCTGTCCATTGAGGATGTTCGACAAGTTGAGGAGCTAAATGCAGTCGATGCATTTCGACAAACACTTCTACTAGACAACTTGCTTCCTTCAATACATGATGACTATCATATGTTATTGAGATTCTTGAAAGCAAGGAAGTTTGATATTGAGAAAGCAAAGCTTATGTGGGCCAACATGATCCAATGGAGGAAAGACTATGGTACAGATACAATTATAGAGGATTTTGATTTCAAGGAGTTGCAAGAAGTCCAGAAGTACTATCCACATGGTTATCATGGTGTGGACAAGGAGGGAAGACCTGTTTATATTGAGAGGCTAGGAAAAGTTGATCCCAATAGGCTTATGCAAGGTTTCAAAAACTTCACCAAGTCTGCTCGAGAACTCATCATTCAGCTGCAGAAGATTGATAGTGATTACTATCCTGAAACACTTCATCAAATGTTTATCATCAATGCTGGTCCTGGTTTTAAGCTTCTATGGAACACAGTGAAAACATTTCTTGATCCCAAAACTACTTCAAAGATTCATGTTCTTGGAAACAAGTTCCACAGTAAATTACTTGAGATTATCGATGCGAGTGAGCTACCAGAATTTCTAGGCGGTAGTTGCACCTGTGTAGATCATGATGGCTGTATGACATCCGATAAAGGGCCATGGCAAGACCAAAACATTTTAAAGATGGTTCTTAGTGGTAAAGTGCAATGTTCTAAACAAATCGTAACAATTTCCAACGACGGGGGGGTGATTGAATGTGATAAAACATCTTTTCCAAAGGCAAAAAGTGGCTATACATCTACTGGAGAATCAGTATCTGAAGTTGAAGATATCACCTCTCCCAAAGCATGTGGGAATTCTATGAACCCTATACTGACTCATGTCCAAGAAGAGGCAAGTGATAGTACATTAATTACAAGGCAAGATTTGTTGATAAGGTTGGTCATACCGGTGGTTTTCCTGAGTATGATGAATATGTTCCCATGGTTGACAAGATTATTGATGTTGGACCAAAGGAGAAGCAAGCAGCACCACGAAACTCATTTGGCTCAAAAGCAGTCATTAAAGAATCTTTATGGCATGGATGCAGAAAATCTGCTTTTGGTAACCAGGACTGTTACAGTGGGCATCGTGTTTGCCCTTTTTGCCTTTGTTCGAACAATAGCATTTCGTGTGACAAAGGGAGTAAAAAGGGAGGAACTTGCTACCAGATTCACAAAGCCAAACCCCTCCTCATCTTCTACCTTGAAACGCCTCAGTGAGCTTGAAAAAAATGTTGACATACTACAGTCAAAACTTAATGCCATGCCAAGTGAGAAAGAGGAGCTGCTGAATGCTGCAGTTTATCGTGTGGATGCATTGGAAGCAGAGCTCATTGCTACAAAGAAGGCTTTGTACGAGGCTTTAATGAGACAAGAAGAACTTTTGGCATACATAGACAGTCGGGAAAAAAGCAAATTCAAGGTAAGTCAAAAGTTAAGGCGTCTTGTCCAGTTTATATAA

Protein sequence

>Msa0709670

MNYDTFETLLIIVGNDERRESSEDDKWKRIGSLKKKAINASCKLRHSLKKKRSSKSSGSRSNSLSIEDVRQVEELNAVDAFRQTLLLDNLLPSIHDDYHMLLRFLKARKFDIEKAKLMWANMIQWRKDYGTDTIIEDFDFKELQEVQKYYPHGYHGVDKEGRPVYIERLGKVDPNRLMQGFKNFTKSARELIIQLQKIDSDYYPETLHQMFIINAGPGFKLLWNTVKTFLDPKTTSKIHVLGNKFHSKLLEIIDASELPEFLGGSCTCVDHDGCMTSDKGPWQDQNILKMVLSGKVQCSKQIVTISNDGGVIECDKTSFPKAKSGYTSTGESVSEVEDITSPKACGNSMNPILTHVQEEASDSTLITRQDLLIRLVIPVVFLSMMNMFPWLTRLLMLDQRRSKQHHETHLAQKQSLKNLYGMDAENLLLVTRTVTVGIVFALFAFVRTIAFRVTKGVKREELATRFTKPNPSSSSTLKRLSELEKNVDILQSKLNAMPSEKEELLNAAVYRVDALEAELIATKKALYEALMRQEELLAYIDSREKSKFKVSQKLRRLVQFI*