Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724860 | XP_013453889.1 | 97.633 | 338 | 8 | 0 | 1 | 338 | 1 | 338 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724860 | sp|Q96519|PER11_ARATH | 71.661 | 307 | 86 | 1 | 33 | 338 | 30 | 336 | 5.31e-170 | 479 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724860 | A0A072UQ08 | 97.633 | 338 | 8 | 0 | 1 | 338 | 1 | 338 | 0.0 | 687 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028690 | Msa0724860 | 0.832208 | 1.077796e-55 | -8.615850e-47 |
| Msa0060410 | Msa0724860 | 0.802764 | 4.804562e-49 | -8.615850e-47 |
| Msa0089190 | Msa0724860 | 0.805851 | 1.093406e-49 | -8.615850e-47 |
| Msa0119240 | Msa0724860 | 0.826188 | 3.110985e-54 | -8.615850e-47 |
| Msa0612350 | Msa0724860 | 0.815629 | 8.381797e-52 | -8.615850e-47 |
| Msa0724860 | Msa0769540 | 0.859506 | 3.944840e-63 | -8.615850e-47 |
| Msa0724860 | Msa0773030 | 0.814133 | 1.799275e-51 | -8.615850e-47 |
| Msa0724860 | Msa0810330 | 0.848185 | 7.199859e-60 | -8.615850e-47 |
| Msa0724860 | Msa0850640 | 0.826971 | 2.023554e-54 | -8.615850e-47 |
| Msa0724860 | Msa0907880 | 0.810322 | 1.221326e-50 | -8.615850e-47 |
| Msa0724860 | Msa1131270 | 0.854417 | 1.248428e-61 | -8.615850e-47 |
| Msa0724860 | Msa1202800 | 0.808666 | 2.768210e-50 | -8.615850e-47 |
| Msa0724860 | Msa1203440 | 0.849331 | 3.462647e-60 | -8.615850e-47 |
| Msa0724860 | Msa1211940 | 0.802045 | 6.757708e-49 | -8.615850e-47 |
| Msa0724860 | Msa1255690 | 0.831245 | 1.862065e-55 | -8.615850e-47 |
| Msa0724860 | Msa1323070 | 0.823918 | 1.069014e-53 | -8.615850e-47 |
| Msa0724860 | Msa1344450 | 0.804982 | 1.663054e-49 | -8.615850e-47 |
| Msa0724860 | Msa1413450 | 0.844606 | 6.814624e-59 | -8.615850e-47 |
| Msa0724860 | Msa1430950 | 0.834017 | 3.822162e-56 | -8.615850e-47 |
| Msa0724860 | Msa1433360 | 0.813155 | 2.953125e-51 | -8.615850e-47 |
| Msa0724860 | Msa1439250 | 0.813633 | 2.319297e-51 | -8.615850e-47 |
| Msa0136000 | Msa0724860 | 0.800025 | 1.748526e-48 | -8.615850e-47 |
| Msa0168750 | Msa0724860 | 0.850820 | 1.326384e-60 | -8.615850e-47 |
| Msa0189990 | Msa0724860 | 0.818048 | 2.402084e-52 | -8.615850e-47 |
| Msa0364900 | Msa0724860 | 0.812448 | 4.218473e-51 | -8.615850e-47 |
| Msa0307740 | Msa0724860 | 0.840562 | 8.070320e-58 | -8.615850e-47 |
| Msa0497190 | Msa0724860 | 0.803724 | 3.040272e-49 | -8.615850e-47 |
| Msa0566280 | Msa0724860 | 0.809257 | 2.068993e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724860 | MtrunA17_Chr5g0421411 | 98.252 | 286 | 5 | 0 | 53 | 338 | 1 | 286 | 0.0 | 587 |
| Msa0724860 | MtrunA17_Chr7g0244461 | 46.732 | 306 | 151 | 4 | 32 | 337 | 19 | 312 | 6.86e-98 | 292 |
| Msa0724860 | MtrunA17_Chr5g0404721 | 48.000 | 300 | 152 | 3 | 38 | 337 | 35 | 330 | 1.36e-97 | 292 |
| Msa0724860 | MtrunA17_Chr3g0106921 | 46.084 | 332 | 155 | 7 | 11 | 337 | 8 | 320 | 1.26e-96 | 289 |
| Msa0724860 | MtrunA17_Chr5g0432441 | 47.904 | 334 | 149 | 9 | 10 | 337 | 12 | 326 | 9.85e-96 | 287 |
| Msa0724860 | MtrunA17_Chr2g0320051 | 44.073 | 329 | 166 | 5 | 9 | 337 | 8 | 318 | 5.17e-94 | 282 |
| Msa0724860 | MtrunA17_Chr5g0400331 | 47.267 | 311 | 153 | 4 | 33 | 337 | 26 | 331 | 5.65e-94 | 283 |
| Msa0724860 | MtrunA17_Chr8g0372601 | 46.535 | 303 | 154 | 5 | 38 | 338 | 35 | 331 | 1.20e-93 | 282 |
| Msa0724860 | MtrunA17_Chr2g0292091 | 45.397 | 315 | 163 | 4 | 26 | 337 | 17 | 325 | 2.62e-93 | 281 |
| Msa0724860 | MtrunA17_Chr2g0320071 | 42.643 | 333 | 172 | 5 | 5 | 337 | 4 | 317 | 6.57e-93 | 279 |
| Msa0724860 | MtrunA17_Chr3g0104101 | 92.199 | 141 | 11 | 0 | 198 | 338 | 10 | 150 | 1.26e-92 | 272 |
| Msa0724860 | MtrunA17_Chr3g0114451 | 45.955 | 309 | 155 | 4 | 29 | 337 | 22 | 318 | 1.35e-92 | 278 |
| Msa0724860 | MtrunA17_Chr7g0244451 | 43.865 | 326 | 166 | 5 | 12 | 337 | 8 | 316 | 1.91e-92 | 278 |
| Msa0724860 | MtrunA17_Chr5g0438021 | 43.558 | 326 | 172 | 4 | 13 | 337 | 11 | 325 | 2.69e-92 | 278 |
| Msa0724860 | MtrunA17_Chr7g0224371 | 43.844 | 333 | 161 | 8 | 9 | 337 | 12 | 322 | 3.42e-92 | 278 |
| Msa0724860 | MtrunA17_Chr2g0320101 | 43.871 | 310 | 162 | 4 | 28 | 337 | 20 | 317 | 7.58e-92 | 276 |
| Msa0724860 | MtrunA17_Chr2g0320061 | 44.516 | 310 | 161 | 5 | 28 | 337 | 20 | 318 | 2.42e-91 | 275 |
| Msa0724860 | MtrunA17_Chr3g0129051 | 43.373 | 332 | 171 | 6 | 7 | 337 | 7 | 322 | 3.94e-91 | 275 |
| Msa0724860 | MtrunA17_Chr4g0013171 | 48.387 | 310 | 140 | 8 | 33 | 337 | 27 | 321 | 6.08e-91 | 275 |
| Msa0724860 | MtrunA17_Chr4g0068621 | 47.573 | 309 | 148 | 7 | 33 | 337 | 38 | 336 | 6.41e-91 | 275 |
| Msa0724860 | MtrunA17_Chr1g0155611 | 45.902 | 305 | 162 | 3 | 33 | 337 | 46 | 347 | 6.83e-91 | 275 |
| Msa0724860 | MtrunA17_Chr2g0292251 | 44.728 | 313 | 168 | 5 | 27 | 338 | 22 | 330 | 2.65e-90 | 274 |
| Msa0724860 | MtrunA17_Chr2g0292181 | 45.367 | 313 | 166 | 5 | 27 | 338 | 32 | 340 | 3.17e-89 | 271 |
| Msa0724860 | MtrunA17_Chr4g0070951 | 43.505 | 331 | 174 | 5 | 9 | 338 | 12 | 330 | 6.86e-89 | 270 |
| Msa0724860 | MtrunA17_Chr2g0292151 | 45.231 | 325 | 169 | 6 | 14 | 337 | 14 | 330 | 2.63e-88 | 269 |
| Msa0724860 | MtrunA17_Chr4g0013191 | 46.128 | 297 | 148 | 4 | 42 | 337 | 55 | 340 | 5.80e-88 | 268 |
| Msa0724860 | MtrunA17_Chr2g0292211 | 44.681 | 329 | 167 | 7 | 14 | 338 | 25 | 342 | 6.57e-88 | 268 |
| Msa0724860 | MtrunA17_Chr2g0320091 | 44.051 | 311 | 161 | 5 | 28 | 337 | 20 | 318 | 1.60e-87 | 266 |
| Msa0724860 | MtrunA17_Chr5g0402571 | 45.603 | 307 | 160 | 5 | 32 | 337 | 26 | 326 | 2.67e-87 | 265 |
| Msa0724860 | MtrunA17_Chr2g0299691 | 45.062 | 324 | 172 | 4 | 17 | 338 | 40 | 359 | 2.92e-87 | 266 |
| Msa0724860 | MtrunA17_Chr4g0038161 | 44.345 | 336 | 164 | 7 | 5 | 337 | 5 | 320 | 3.60e-87 | 265 |
| Msa0724860 | MtrunA17_Chr2g0292111 | 44.000 | 325 | 173 | 6 | 14 | 337 | 14 | 330 | 3.66e-87 | 266 |
| Msa0724860 | MtrunA17_Chr5g0402581 | 45.928 | 307 | 159 | 5 | 32 | 337 | 26 | 326 | 6.09e-87 | 265 |
| Msa0724860 | MtrunA17_Chr5g0432351 | 44.611 | 334 | 167 | 9 | 7 | 337 | 3 | 321 | 5.29e-86 | 262 |
| Msa0724860 | MtrunA17_Chr4g0013201 | 45.098 | 306 | 156 | 5 | 32 | 337 | 45 | 338 | 7.49e-86 | 262 |
| Msa0724860 | MtrunA17_Chr2g0292241 | 43.865 | 326 | 174 | 6 | 14 | 338 | 14 | 331 | 7.76e-86 | 263 |
| Msa0724860 | MtrunA17_Chr4g0038151 | 44.268 | 314 | 155 | 6 | 30 | 337 | 22 | 321 | 1.21e-85 | 261 |
| Msa0724860 | MtrunA17_Chr5g0432341 | 45.210 | 334 | 165 | 9 | 7 | 337 | 3 | 321 | 2.47e-85 | 260 |
| Msa0724860 | MtrunA17_Chr4g0043391 | 43.226 | 310 | 165 | 4 | 30 | 337 | 24 | 324 | 2.52e-85 | 260 |
| Msa0724860 | MtrunA17_Chr3g0106901 | 44.479 | 326 | 167 | 5 | 13 | 337 | 11 | 323 | 3.24e-85 | 260 |
| Msa0724860 | MtrunA17_Chr4g0013181 | 46.053 | 304 | 150 | 6 | 36 | 337 | 62 | 353 | 7.33e-85 | 260 |
| Msa0724860 | MtrunA17_Chr7g0258811 | 41.593 | 339 | 183 | 8 | 3 | 337 | 44 | 371 | 1.19e-84 | 260 |
| Msa0724860 | MtrunA17_Chr2g0320031 | 43.137 | 306 | 163 | 3 | 32 | 337 | 25 | 319 | 1.39e-84 | 258 |
| Msa0724860 | MtrunA17_Chr2g0292291 | 42.331 | 326 | 179 | 5 | 14 | 338 | 16 | 333 | 1.56e-84 | 259 |
| Msa0724860 | MtrunA17_Chr5g0432331 | 46.278 | 309 | 152 | 8 | 32 | 337 | 55 | 352 | 3.79e-84 | 258 |
| Msa0724860 | MtrunA17_Chr3g0129041 | 42.470 | 332 | 174 | 6 | 7 | 337 | 7 | 322 | 5.03e-84 | 257 |
| Msa0724860 | MtrunA17_Chr4g0038171 | 42.903 | 310 | 166 | 4 | 30 | 337 | 21 | 321 | 5.21e-84 | 257 |
| Msa0724860 | MtrunA17_Chr3g0129061 | 41.867 | 332 | 176 | 6 | 7 | 337 | 7 | 322 | 1.10e-83 | 256 |
| Msa0724860 | MtrunA17_Chr2g0291751 | 42.769 | 325 | 177 | 6 | 14 | 337 | 14 | 330 | 1.37e-83 | 257 |
| Msa0724860 | MtrunA17_Chr4g0013721 | 44.695 | 311 | 162 | 5 | 28 | 337 | 95 | 396 | 1.61e-83 | 259 |
| Msa0724860 | MtrunA17_Chr4g0013821 | 44.040 | 302 | 159 | 5 | 37 | 337 | 32 | 324 | 2.91e-83 | 256 |
| Msa0724860 | MtrunA17_Chr2g0292101 | 43.030 | 330 | 177 | 6 | 12 | 337 | 4 | 326 | 5.08e-83 | 255 |
| Msa0724860 | MtrunA17_Chr2g0292261 | 41.056 | 341 | 186 | 7 | 1 | 337 | 1 | 330 | 1.28e-82 | 254 |
| Msa0724860 | MtrunA17_Chr2g0292271 | 42.388 | 335 | 180 | 6 | 6 | 337 | 6 | 330 | 2.23e-82 | 254 |
| Msa0724860 | MtrunA17_Chr1g0175561 | 42.357 | 314 | 175 | 6 | 26 | 337 | 17 | 326 | 2.44e-82 | 253 |
| Msa0724860 | MtrunA17_Chr1g0213061 | 41.033 | 329 | 176 | 8 | 11 | 337 | 9 | 321 | 5.60e-82 | 252 |
| Msa0724860 | MtrunA17_Chr3g0107881 | 45.687 | 313 | 155 | 8 | 29 | 337 | 23 | 324 | 5.62e-81 | 249 |
| Msa0724860 | MtrunA17_Chr6g0477071 | 42.623 | 305 | 159 | 7 | 33 | 337 | 54 | 342 | 5.63e-79 | 244 |
| Msa0724860 | MtrunA17_Chr8g0371381 | 42.997 | 307 | 160 | 8 | 33 | 337 | 26 | 319 | 4.58e-77 | 239 |
| Msa0724860 | MtrunA17_Chr1g0188431 | 42.295 | 305 | 160 | 7 | 33 | 337 | 39 | 327 | 6.94e-77 | 239 |
| Msa0724860 | MtrunA17_Chr5g0405991 | 39.818 | 329 | 179 | 8 | 10 | 337 | 6 | 316 | 5.37e-76 | 236 |
| Msa0724860 | MtrunA17_Chr1g0204011 | 39.583 | 336 | 187 | 8 | 3 | 337 | 2 | 322 | 2.86e-75 | 234 |
| Msa0724860 | MtrunA17_Chr4g0024121 | 39.264 | 326 | 184 | 8 | 14 | 337 | 13 | 326 | 3.02e-74 | 232 |
| Msa0724860 | MtrunA17_Chr1g0157051 | 40.789 | 304 | 170 | 5 | 33 | 336 | 24 | 317 | 5.39e-72 | 226 |
| Msa0724860 | MtrunA17_Chr1g0194151 | 41.325 | 317 | 171 | 7 | 28 | 337 | 25 | 333 | 6.04e-69 | 218 |
| Msa0724860 | MtrunA17_Chr3g0128061 | 38.554 | 332 | 194 | 5 | 8 | 338 | 5 | 327 | 9.47e-69 | 218 |
| Msa0724860 | MtrunA17_Chr2g0322861 | 38.019 | 313 | 183 | 9 | 28 | 337 | 82 | 386 | 3.06e-68 | 218 |
| Msa0724860 | MtrunA17_Chr2g0279041 | 41.311 | 305 | 163 | 9 | 38 | 337 | 32 | 325 | 4.00e-68 | 216 |
| Msa0724860 | MtrunA17_Chr4g0063671 | 40.190 | 316 | 172 | 9 | 28 | 337 | 16 | 320 | 6.81e-68 | 215 |
| Msa0724860 | MtrunA17_Chr4g0076211 | 38.689 | 305 | 173 | 6 | 34 | 337 | 42 | 333 | 2.10e-67 | 214 |
| Msa0724860 | MtrunA17_Chr4g0046131 | 37.908 | 306 | 182 | 5 | 32 | 333 | 41 | 342 | 9.72e-65 | 208 |
| Msa0724860 | MtrunA17_Chr1g0197411 | 37.662 | 308 | 184 | 6 | 29 | 333 | 24 | 326 | 1.31e-64 | 207 |
| Msa0724860 | MtrunA17_Chr1g0194271 | 39.077 | 325 | 174 | 8 | 28 | 337 | 25 | 340 | 3.22e-64 | 207 |
| Msa0724860 | MtrunA17_Chr5g0432401 | 37.462 | 331 | 148 | 8 | 9 | 336 | 11 | 285 | 5.59e-64 | 204 |
| Msa0724860 | MtrunA17_Chr1g0164891 | 40.461 | 304 | 172 | 7 | 38 | 337 | 94 | 392 | 5.75e-64 | 207 |
| Msa0724860 | MtrunA17_Chr2g0296621 | 39.216 | 306 | 171 | 7 | 33 | 337 | 50 | 341 | 2.96e-63 | 204 |
| Msa0724860 | MtrunA17_Chr4g0075241 | 32.432 | 333 | 211 | 4 | 5 | 337 | 9 | 327 | 4.05e-62 | 201 |
| Msa0724860 | MtrunA17_Chr2g0329641 | 36.593 | 317 | 178 | 10 | 30 | 337 | 33 | 335 | 1.45e-60 | 197 |
| Msa0724860 | MtrunA17_Chr7g0254231 | 35.065 | 308 | 181 | 8 | 33 | 338 | 22 | 312 | 1.75e-60 | 196 |
| Msa0724860 | MtrunA17_Chr6g0451571 | 36.336 | 333 | 192 | 8 | 9 | 337 | 18 | 334 | 2.63e-60 | 196 |
| Msa0724860 | MtrunA17_Chr7g0268501 | 36.119 | 335 | 191 | 11 | 8 | 337 | 4 | 320 | 1.81e-59 | 194 |
| Msa0724860 | MtrunA17_Chr7g0268521 | 36.119 | 335 | 191 | 11 | 8 | 337 | 4 | 320 | 1.81e-59 | 194 |
| Msa0724860 | MtrunA17_Chr6g0467161 | 35.328 | 351 | 190 | 11 | 1 | 338 | 11 | 337 | 1.94e-59 | 194 |
| Msa0724860 | MtrunA17_Chr8g0364291 | 35.577 | 312 | 192 | 7 | 29 | 337 | 19 | 324 | 4.56e-59 | 193 |
| Msa0724860 | MtrunA17_Chr2g0316791 | 36.336 | 333 | 174 | 9 | 33 | 333 | 76 | 402 | 2.94e-58 | 193 |
| Msa0724860 | MtrunA17_Chr6g0467121 | 35.821 | 335 | 192 | 9 | 9 | 337 | 46 | 363 | 9.02e-58 | 191 |
| Msa0724860 | MtrunA17_Chr1g0148021 | 36.624 | 314 | 180 | 9 | 32 | 337 | 26 | 328 | 1.23e-57 | 189 |
| Msa0724860 | MtrunA17_Chr2g0316481 | 36.036 | 333 | 175 | 9 | 33 | 333 | 76 | 402 | 2.65e-57 | 191 |
| Msa0724860 | MtrunA17_Chr5g0401431 | 33.634 | 333 | 206 | 9 | 9 | 336 | 6 | 328 | 5.10e-57 | 187 |
| Msa0724860 | MtrunA17_Chr7g0225221 | 35.435 | 333 | 195 | 9 | 8 | 337 | 5 | 320 | 3.89e-56 | 185 |
| Msa0724860 | MtrunA17_Chr2g0278671 | 38.037 | 326 | 165 | 11 | 28 | 337 | 19 | 323 | 4.90e-56 | 185 |
| Msa0724860 | MtrunA17_Chr2g0316831 | 36.036 | 333 | 175 | 9 | 33 | 333 | 112 | 438 | 6.29e-56 | 188 |
| Msa0724860 | MtrunA17_Chr6g0467251 | 36.254 | 331 | 194 | 7 | 7 | 333 | 7 | 324 | 6.83e-56 | 185 |
| Msa0724860 | MtrunA17_Chr2g0316191 | 35.928 | 334 | 175 | 10 | 33 | 333 | 76 | 403 | 7.87e-56 | 187 |
| Msa0724860 | MtrunA17_Chr6g0460711 | 35.780 | 327 | 189 | 8 | 14 | 337 | 6 | 314 | 8.35e-56 | 184 |
| Msa0724860 | MtrunA17_Chr7g0254201 | 34.295 | 312 | 179 | 9 | 33 | 337 | 20 | 312 | 9.18e-56 | 184 |
| Msa0724860 | MtrunA17_Chr2g0279061 | 41.353 | 266 | 140 | 9 | 77 | 337 | 12 | 266 | 1.08e-54 | 179 |
| Msa0724860 | MtrunA17_Chr2g0311251 | 34.226 | 336 | 182 | 10 | 33 | 336 | 11 | 339 | 2.53e-51 | 173 |
| Msa0724860 | MtrunA17_Chr4g0072091 | 35.294 | 306 | 185 | 8 | 32 | 333 | 23 | 319 | 3.32e-51 | 172 |
| Msa0724860 | MtrunA17_Chr1g0181431 | 32.039 | 309 | 198 | 5 | 32 | 338 | 26 | 324 | 1.12e-50 | 171 |
| Msa0724860 | MtrunA17_Chr4g0053871 | 33.762 | 311 | 191 | 7 | 27 | 333 | 21 | 320 | 1.67e-50 | 171 |
| Msa0724860 | MtrunA17_Chr4g0074851 | 31.429 | 315 | 198 | 6 | 28 | 337 | 27 | 328 | 3.20e-49 | 167 |
| Msa0724860 | MtrunA17_Chr1g0181481 | 31.715 | 309 | 199 | 5 | 32 | 338 | 26 | 324 | 3.97e-49 | 167 |
| Msa0724860 | MtrunA17_Chr5g0413051 | 35.275 | 309 | 182 | 10 | 38 | 337 | 78 | 377 | 4.46e-49 | 168 |
| Msa0724860 | MtrunA17_Chr1g0181511 | 32.581 | 310 | 195 | 7 | 32 | 338 | 26 | 324 | 6.21e-49 | 166 |
| Msa0724860 | MtrunA17_Chr3g0136751 | 33.631 | 336 | 199 | 8 | 7 | 337 | 6 | 322 | 1.16e-48 | 166 |
| Msa0724860 | MtrunA17_Chr2g0311241 | 31.746 | 378 | 170 | 13 | 33 | 333 | 60 | 426 | 2.90e-48 | 167 |
| Msa0724860 | MtrunA17_Chr3g0114461 | 42.211 | 199 | 104 | 5 | 139 | 337 | 5 | 192 | 1.57e-43 | 148 |
| Msa0724860 | MtrunA17_Chr2g0316811 | 37.603 | 242 | 129 | 6 | 33 | 256 | 50 | 287 | 4.04e-42 | 149 |
| Msa0724860 | MtrunA17_Chr2g0292281 | 39.352 | 216 | 114 | 7 | 125 | 338 | 17 | 217 | 6.15e-40 | 140 |
| Msa0724860 | MtrunA17_Chr4g0004591 | 29.595 | 321 | 161 | 7 | 33 | 333 | 77 | 352 | 7.18e-36 | 133 |
| Msa0724860 | MtrunA17_Chr3g0114491 | 51.754 | 114 | 55 | 0 | 30 | 143 | 15 | 128 | 1.47e-35 | 126 |
| Msa0724860 | MtrunA17_Chr2g0316141 | 33.333 | 276 | 162 | 10 | 79 | 338 | 11 | 280 | 1.73e-34 | 127 |
| Msa0724860 | MtrunA17_Chr2g0316181 | 33.333 | 276 | 162 | 10 | 79 | 338 | 11 | 280 | 1.73e-34 | 127 |
| Msa0724860 | MtrunA17_Chr5g0432321 | 46.032 | 126 | 57 | 5 | 154 | 278 | 17 | 132 | 5.79e-25 | 98.2 |
| Msa0724860 | MtrunA17_Chr6g0468731 | 56.944 | 72 | 27 | 2 | 72 | 143 | 22 | 89 | 3.90e-20 | 84.0 |
| Msa0724860 | MtrunA17_Chr1g0181491 | 36.207 | 116 | 68 | 3 | 30 | 143 | 9 | 120 | 3.14e-19 | 83.2 |
| Msa0724860 | MtrunA17_Chr7g0254181 | 38.095 | 105 | 61 | 2 | 95 | 199 | 22 | 122 | 3.43e-17 | 77.8 |
| Msa0724860 | MtrunA17_Chr1g0181501 | 29.126 | 206 | 118 | 7 | 143 | 338 | 3 | 190 | 4.85e-16 | 75.5 |
| Msa0724860 | MtrunA17_Chr4g0013811 | 43.421 | 76 | 43 | 0 | 140 | 215 | 2 | 77 | 2.03e-15 | 70.5 |
| Msa0724860 | MtrunA17_Chr1g0196191 | 51.429 | 70 | 33 | 1 | 71 | 140 | 23 | 91 | 1.20e-14 | 70.5 |
| Msa0724860 | MtrunA17_Chr5g0432361 | 41.304 | 92 | 51 | 3 | 245 | 336 | 20 | 108 | 5.08e-14 | 67.4 |
| Msa0724860 | MtrunA17_Chr7g0254171 | 33.654 | 104 | 65 | 2 | 78 | 178 | 3 | 105 | 9.63e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724860 | AT1G68850.1 | 71.661 | 307 | 86 | 1 | 33 | 338 | 30 | 336 | 5.39e-171 | 479 |
| Msa0724860 | AT4G36430.1 | 48.344 | 302 | 152 | 3 | 37 | 338 | 34 | 331 | 3.50e-102 | 304 |
| Msa0724860 | AT2G18150.1 | 48.000 | 300 | 152 | 3 | 38 | 337 | 41 | 336 | 3.88e-100 | 299 |
| Msa0724860 | AT2G18140.1 | 47.682 | 302 | 154 | 3 | 36 | 337 | 38 | 335 | 1.26e-96 | 290 |
| Msa0724860 | AT4G16270.1 | 49.502 | 301 | 144 | 5 | 38 | 337 | 55 | 348 | 1.20e-94 | 285 |
| Msa0724860 | AT1G44970.1 | 47.667 | 300 | 154 | 3 | 38 | 337 | 50 | 346 | 1.45e-94 | 285 |
| Msa0724860 | AT5G19890.1 | 47.284 | 313 | 148 | 8 | 30 | 337 | 27 | 327 | 1.82e-94 | 284 |
| Msa0724860 | AT3G50990.1 | 44.839 | 310 | 167 | 3 | 28 | 337 | 36 | 341 | 1.06e-93 | 283 |
| Msa0724860 | AT5G05340.1 | 45.110 | 317 | 161 | 6 | 22 | 337 | 20 | 324 | 7.60e-93 | 280 |
| Msa0724860 | AT2G38380.1 | 45.338 | 311 | 164 | 6 | 29 | 337 | 27 | 333 | 1.47e-87 | 267 |
| Msa0724860 | AT5G06720.1 | 41.212 | 330 | 184 | 6 | 9 | 337 | 13 | 333 | 1.53e-87 | 266 |
| Msa0724860 | AT2G22420.1 | 45.333 | 300 | 156 | 3 | 38 | 337 | 28 | 319 | 4.87e-87 | 265 |
| Msa0724860 | AT2G35380.1 | 43.402 | 341 | 173 | 6 | 7 | 337 | 5 | 335 | 4.93e-87 | 265 |
| Msa0724860 | AT5G58400.1 | 43.544 | 333 | 168 | 7 | 7 | 337 | 11 | 325 | 5.45e-87 | 265 |
| Msa0724860 | AT3G32980.1 | 45.192 | 312 | 166 | 5 | 29 | 338 | 27 | 335 | 5.59e-87 | 266 |
| Msa0724860 | AT5G66390.1 | 41.720 | 314 | 179 | 3 | 24 | 337 | 24 | 333 | 5.93e-87 | 265 |
| Msa0724860 | AT5G06730.1 | 40.303 | 330 | 187 | 6 | 9 | 337 | 14 | 334 | 8.63e-87 | 265 |
| Msa0724860 | AT2G38390.1 | 43.408 | 311 | 170 | 6 | 29 | 337 | 27 | 333 | 4.27e-86 | 263 |
| Msa0724860 | AT5G58390.1 | 43.373 | 332 | 168 | 7 | 8 | 337 | 3 | 316 | 1.32e-85 | 261 |
| Msa0724860 | AT3G49120.1 | 43.590 | 312 | 171 | 5 | 29 | 338 | 28 | 336 | 1.18e-84 | 260 |
| Msa0724860 | AT3G49110.1 | 42.949 | 312 | 173 | 5 | 29 | 338 | 29 | 337 | 2.50e-82 | 254 |
| Msa0724860 | AT4G08770.1 | 42.308 | 312 | 175 | 5 | 29 | 338 | 20 | 328 | 2.68e-82 | 253 |
| Msa0724860 | AT1G14540.1 | 41.987 | 312 | 165 | 4 | 29 | 337 | 17 | 315 | 4.86e-82 | 252 |
| Msa0724860 | AT4G08780.1 | 41.667 | 312 | 177 | 5 | 29 | 338 | 20 | 328 | 1.69e-81 | 251 |
| Msa0724860 | AT1G14550.1 | 42.949 | 312 | 161 | 7 | 30 | 337 | 23 | 321 | 1.48e-80 | 248 |
| Msa0724860 | AT1G49570.1 | 42.581 | 310 | 164 | 5 | 32 | 335 | 47 | 348 | 5.57e-80 | 248 |
| Msa0724860 | AT5G19880.1 | 43.109 | 341 | 171 | 9 | 6 | 337 | 3 | 329 | 6.75e-77 | 239 |
| Msa0724860 | AT2G41480.1 | 40.118 | 339 | 183 | 9 | 5 | 337 | 4 | 328 | 1.31e-74 | 233 |
| Msa0724860 | AT4G11290.1 | 39.423 | 312 | 180 | 7 | 29 | 337 | 21 | 326 | 8.14e-73 | 229 |
| Msa0724860 | AT5G51890.1 | 41.479 | 311 | 170 | 8 | 29 | 337 | 22 | 322 | 4.34e-72 | 226 |
| Msa0724860 | AT4G33420.1 | 38.739 | 333 | 178 | 9 | 6 | 337 | 18 | 325 | 5.86e-71 | 224 |
| Msa0724860 | AT1G05260.1 | 37.742 | 310 | 186 | 6 | 30 | 338 | 23 | 326 | 9.30e-71 | 223 |
| Msa0724860 | AT4G33420.2 | 38.739 | 333 | 178 | 9 | 6 | 337 | 65 | 372 | 3.06e-70 | 223 |
| Msa0724860 | AT5G64120.1 | 41.528 | 301 | 163 | 8 | 38 | 337 | 40 | 328 | 7.85e-69 | 218 |
| Msa0724860 | AT1G71695.1 | 38.387 | 310 | 174 | 7 | 33 | 338 | 44 | 340 | 3.98e-68 | 218 |
| Msa0724860 | AT5G42180.1 | 39.145 | 304 | 175 | 5 | 33 | 336 | 23 | 316 | 9.63e-67 | 213 |
| Msa0724860 | AT3G03670.1 | 39.355 | 310 | 174 | 7 | 32 | 337 | 22 | 321 | 1.80e-65 | 209 |
| Msa0724860 | AT3G21770.1 | 36.452 | 310 | 188 | 7 | 26 | 333 | 22 | 324 | 7.46e-65 | 208 |
| Msa0724860 | AT5G40150.1 | 37.267 | 322 | 172 | 9 | 27 | 337 | 26 | 328 | 7.66e-65 | 208 |
| Msa0724860 | AT2G34060.1 | 37.419 | 310 | 180 | 5 | 32 | 334 | 41 | 343 | 2.27e-64 | 207 |
| Msa0724860 | AT3G28200.1 | 37.621 | 311 | 181 | 5 | 29 | 337 | 17 | 316 | 5.14e-64 | 206 |
| Msa0724860 | AT5G39580.1 | 40.728 | 302 | 165 | 9 | 38 | 337 | 30 | 319 | 8.90e-64 | 205 |
| Msa0724860 | AT2G35380.2 | 44.177 | 249 | 128 | 3 | 95 | 337 | 4 | 247 | 3.19e-63 | 201 |
| Msa0724860 | AT1G05240.1 | 37.898 | 314 | 177 | 9 | 31 | 337 | 23 | 325 | 7.16e-63 | 203 |
| Msa0724860 | AT1G05250.1 | 37.898 | 314 | 177 | 9 | 31 | 337 | 23 | 325 | 7.16e-63 | 203 |
| Msa0724860 | AT4G17690.1 | 36.909 | 317 | 178 | 6 | 28 | 337 | 21 | 322 | 2.09e-62 | 202 |
| Msa0724860 | AT5G17820.1 | 38.111 | 307 | 173 | 9 | 32 | 337 | 23 | 313 | 5.97e-62 | 200 |
| Msa0724860 | AT5G47000.1 | 37.987 | 308 | 178 | 7 | 33 | 337 | 33 | 330 | 2.80e-61 | 199 |
| Msa0724860 | AT5G15180.1 | 36.686 | 338 | 192 | 11 | 6 | 337 | 8 | 329 | 3.43e-61 | 199 |
| Msa0724860 | AT5G17820.2 | 38.111 | 307 | 173 | 9 | 32 | 337 | 76 | 366 | 1.10e-60 | 199 |
| Msa0724860 | AT4G33870.1 | 33.243 | 367 | 192 | 10 | 3 | 333 | 48 | 397 | 7.46e-60 | 197 |
| Msa0724860 | AT5G64110.1 | 38.264 | 311 | 176 | 8 | 31 | 337 | 32 | 330 | 1.02e-59 | 195 |
| Msa0724860 | AT3G01190.1 | 37.273 | 330 | 183 | 11 | 12 | 337 | 12 | 321 | 2.26e-59 | 194 |
| Msa0724860 | AT5G14130.1 | 34.146 | 328 | 202 | 8 | 14 | 337 | 13 | 330 | 3.30e-58 | 191 |
| Msa0724860 | AT5G64100.1 | 38.816 | 304 | 168 | 9 | 38 | 337 | 42 | 331 | 6.31e-58 | 190 |
| Msa0724860 | AT5G14130.2 | 34.146 | 328 | 202 | 8 | 14 | 337 | 54 | 371 | 8.49e-58 | 191 |
| Msa0724860 | AT1G30870.1 | 38.710 | 310 | 172 | 9 | 33 | 338 | 51 | 346 | 3.85e-57 | 189 |
| Msa0724860 | AT4G37530.1 | 36.102 | 313 | 182 | 6 | 29 | 333 | 23 | 325 | 1.63e-56 | 187 |
| Msa0724860 | AT1G24110.1 | 36.039 | 308 | 185 | 6 | 30 | 333 | 19 | 318 | 2.19e-56 | 186 |
| Msa0724860 | AT4G25980.1 | 35.897 | 312 | 182 | 9 | 33 | 337 | 26 | 326 | 5.49e-56 | 185 |
| Msa0724860 | AT1G77100.1 | 35.629 | 334 | 191 | 12 | 10 | 337 | 4 | 319 | 1.18e-55 | 184 |
| Msa0724860 | AT4G37520.1 | 34.839 | 310 | 184 | 6 | 32 | 333 | 26 | 325 | 2.12e-55 | 184 |
| Msa0724860 | AT4G21960.1 | 33.439 | 314 | 191 | 6 | 29 | 337 | 27 | 327 | 4.23e-55 | 183 |
| Msa0724860 | AT2G24800.1 | 36.218 | 312 | 181 | 6 | 32 | 337 | 30 | 329 | 8.07e-55 | 182 |
| Msa0724860 | AT4G31760.1 | 34.242 | 330 | 201 | 7 | 10 | 337 | 11 | 326 | 2.04e-54 | 181 |
| Msa0724860 | AT4G26010.1 | 34.251 | 327 | 188 | 9 | 14 | 337 | 7 | 309 | 4.88e-54 | 180 |
| Msa0724860 | AT2G39040.1 | 36.593 | 317 | 183 | 7 | 30 | 337 | 43 | 350 | 5.19e-54 | 181 |
| Msa0724860 | AT4G26010.2 | 34.251 | 327 | 188 | 9 | 14 | 337 | 35 | 337 | 1.38e-53 | 179 |
| Msa0724860 | AT2G43480.1 | 34.870 | 347 | 196 | 11 | 9 | 337 | 1 | 335 | 2.30e-53 | 179 |
| Msa0724860 | AT4G37520.2 | 34.194 | 310 | 183 | 7 | 32 | 333 | 26 | 322 | 8.72e-53 | 177 |
| Msa0724860 | AT2G18980.1 | 35.202 | 321 | 172 | 9 | 32 | 337 | 24 | 323 | 8.97e-52 | 174 |
| Msa0724860 | AT4G37530.2 | 38.023 | 263 | 149 | 4 | 29 | 283 | 23 | 279 | 2.55e-51 | 172 |
| Msa0724860 | AT3G49960.1 | 34.049 | 326 | 203 | 7 | 14 | 333 | 6 | 325 | 3.49e-51 | 173 |
| Msa0724860 | AT4G30170.1 | 33.861 | 316 | 183 | 6 | 32 | 337 | 26 | 325 | 4.34e-51 | 172 |
| Msa0724860 | AT5G22410.1 | 35.831 | 307 | 182 | 9 | 32 | 334 | 27 | 322 | 8.71e-51 | 172 |
| Msa0724860 | AT2G37130.1 | 32.581 | 310 | 194 | 7 | 32 | 337 | 29 | 327 | 1.87e-49 | 168 |
| Msa0724860 | AT3G17070.1 | 31.642 | 335 | 210 | 7 | 11 | 337 | 16 | 339 | 2.42e-49 | 168 |
| Msa0724860 | AT2G37130.2 | 32.573 | 307 | 192 | 7 | 35 | 337 | 1 | 296 | 6.12e-49 | 166 |
| Msa0724860 | AT5G24070.1 | 34.194 | 310 | 183 | 10 | 37 | 337 | 38 | 335 | 8.16e-49 | 167 |
| Msa0724860 | AT1G34510.1 | 35.065 | 308 | 179 | 8 | 32 | 337 | 21 | 309 | 1.04e-48 | 166 |
| Msa0724860 | AT5G67400.1 | 32.353 | 306 | 197 | 7 | 32 | 333 | 26 | 325 | 1.66e-48 | 166 |
| Msa0724860 | AT5G39580.2 | 46.341 | 164 | 83 | 3 | 38 | 201 | 30 | 188 | 4.25e-41 | 144 |
| Msa0724860 | AT4G25980.2 | 39.535 | 172 | 100 | 2 | 29 | 200 | 67 | 234 | 1.53e-39 | 141 |
| Msa0724860 | AT2G24800.2 | 41.667 | 168 | 94 | 1 | 32 | 199 | 30 | 193 | 5.72e-36 | 130 |
| Msa0724860 | AT3G17070.2 | 31.365 | 271 | 166 | 8 | 75 | 337 | 18 | 276 | 2.55e-34 | 127 |
| Msa0724860 | AT3G42570.1 | 36.842 | 95 | 59 | 1 | 105 | 198 | 53 | 147 | 2.46e-13 | 67.4 |
Find 67 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGATTCAATGGTCAAAA+TGG | 0.150346 | 5_1:+23964266 | Msa0724860:CDS |
| TAGGCCTTGATAAAGAAATT+TGG | 0.197512 | 5_1:-23963151 | None:intergenic |
| GATGATACATACACACTTAA+AGG | 0.209734 | 5_1:+23962776 | Msa0724860:CDS |
| CTTCCATGACTGCTTTATTC+AGG | 0.245006 | 5_1:+23962281 | Msa0724860:CDS |
| TTGGTGGACAAATAGATTTC+AGG | 0.248040 | 5_1:-23964044 | None:intergenic |
| TTCTACCAGTTACTATTAAA+AGG | 0.260627 | 5_1:+23964132 | Msa0724860:CDS |
| ACCAACATCCACTCTTTAAA+AGG | 0.265822 | 5_1:+23962815 | Msa0724860:CDS |
| GCTTCATCACTGGAGAAATT+AGG | 0.312437 | 5_1:+23964310 | Msa0724860:CDS |
| AAATCTATTTGTCCACCAAT+TGG | 0.335126 | 5_1:+23964048 | Msa0724860:CDS |
| TTCATCAGGTGTTGGAAGAT+TGG | 0.344913 | 5_1:-23963109 | None:intergenic |
| CCATTGAATCAGAGAATTGC+TGG | 0.348685 | 5_1:-23964257 | None:intergenic |
| AGGCCTTGATAAAGAAATTT+GGG | 0.352606 | 5_1:-23963150 | None:intergenic |
| GGCTAGAGATGCTGTGATTC+TGG | 0.356640 | 5_1:+23962922 | Msa0724860:CDS |
| AATCTATTTGTCCACCAATT+GGG | 0.367894 | 5_1:+23964049 | Msa0724860:CDS |
| TGTAGGTTGGTGGACCATAT+TGG | 0.381231 | 5_1:+23963031 | Msa0724860:intron |
| TTGAACTGATTATCTGAGAT+TGG | 0.386428 | 5_1:-23964018 | None:intergenic |
| ATTCCCAAATTTCTTTATCA+AGG | 0.393262 | 5_1:+23963147 | Msa0724860:CDS |
| CTACTGTGTTTGACATTGTT+AGG | 0.395693 | 5_1:+23962196 | Msa0724860:CDS |
| GTAGGTTGGTGGACCATATT+GGG | 0.400494 | 5_1:+23963032 | Msa0724860:intron |
| CCAGCAATTCTCTGATTCAA+TGG | 0.417000 | 5_1:+23964257 | Msa0724860:CDS |
| AGGCCTATCAGTCACGGATA+TGG | 0.421834 | 5_1:+23963167 | Msa0724860:CDS |
| CAACCATATCCGTGACTGAT+AGG | 0.423843 | 5_1:-23963170 | None:intergenic |
| ACGGATATGGTTGCCCTTGT+CGG | 0.453404 | 5_1:+23963180 | Msa0724860:CDS |
| AAAGAATTGTCGAAGAGATT+AGG | 0.456399 | 5_1:-23964111 | None:intergenic |
| GTAACGCAGCCTCGGTTGTT+CGG | 0.456843 | 5_1:+23962253 | Msa0724860:CDS |
| CCCACAGGAACATCCCAATA+TGG | 0.467663 | 5_1:-23963045 | None:intergenic |
| TCTGATTCAATGGTCAAAAT+GGG | 0.468708 | 5_1:+23964267 | Msa0724860:CDS |
| TGACATTGTTAGGAAGCAAA+TGG | 0.473769 | 5_1:+23962206 | Msa0724860:CDS |
| ATCTATTTGTCCACCAATTG+GGG | 0.476877 | 5_1:+23964050 | Msa0724860:CDS |
| GAAATGTACTCGAGTGTGTT+CGG | 0.477719 | 5_1:+23964180 | Msa0724860:CDS |
| TAGGAAGCAAATGGAATGTT+CGG | 0.486422 | 5_1:+23962215 | Msa0724860:CDS |
| ATAGAAACGAGGCTTTCATC+AGG | 0.521429 | 5_1:-23963123 | None:intergenic |
| ACGAGGCTTTCATCAGGTGT+TGG | 0.523953 | 5_1:-23963117 | None:intergenic |
| AATTCAGAAAGCTTCATCAC+TGG | 0.525241 | 5_1:+23964300 | Msa0724860:CDS |
| ATCAGGTGTTGGAAGATTGG+TGG | 0.526275 | 5_1:-23963106 | None:intergenic |
| CTCTAATAATACACTAACAA+TGG | 0.528798 | 5_1:+23962050 | Msa0724860:exon |
| TCAGCACAAGAAACAACTCC+AGG | 0.529028 | 5_1:-23962884 | None:intergenic |
| TGAACCTCGTAACGCAGCCT+CGG | 0.534467 | 5_1:+23962245 | Msa0724860:CDS |
| AGACCTGAATAAAGCAGTCA+TGG | 0.539942 | 5_1:-23962284 | None:intergenic |
| TTTGTTGAATCAGAGTGCCC+TGG | 0.544131 | 5_1:+23962866 | Msa0724860:CDS |
| TGTTCAGGGTTGCGATGGAT+CGG | 0.545298 | 5_1:+23962745 | Msa0724860:intron |
| AATGTCAAACACAGTAGGAC+AGG | 0.548709 | 5_1:-23962190 | None:intergenic |
| TGCTGATATTCTCACAATTG+CGG | 0.553704 | 5_1:+23962901 | Msa0724860:CDS |
| TTGACACCTCGCCATACCAA+TGG | 0.559278 | 5_1:-23963944 | None:intergenic |
| ACCTCGCCATACCAATGGTG+TGG | 0.566798 | 5_1:-23963939 | None:intergenic |
| TTATGTGTTCAGGGTTGCGA+TGG | 0.568814 | 5_1:+23962740 | Msa0724860:intron |
| CATGCAGGATCCCACACCAT+TGG | 0.575994 | 5_1:+23963928 | Msa0724860:intron |
| AGGATCCCACACCATTGGTA+TGG | 0.577138 | 5_1:+23963933 | Msa0724860:intron |
| ATTGGGATGTTCCTGTGGGA+AGG | 0.579787 | 5_1:+23963049 | Msa0724860:CDS |
| AGACAATAACATAACAGCAA+TGG | 0.581171 | 5_1:+23964077 | Msa0724860:CDS |
| ACCATATTGGGATGTTCCTG+TGG | 0.584136 | 5_1:+23963044 | Msa0724860:CDS |
| CCAGTTACTATTAAAAGGCG+AGG | 0.584989 | 5_1:+23964137 | Msa0724860:CDS |
| TTATCAAGGCCTATCAGTCA+CGG | 0.585184 | 5_1:+23963161 | Msa0724860:CDS |
| ACAGAATCTTTCCTTCCCAC+AGG | 0.589625 | 5_1:-23963060 | None:intergenic |
| CTAACAATGTCAAACACAGT+AGG | 0.608651 | 5_1:-23962195 | None:intergenic |
| CCTCGCCATACCAATGGTGT+GGG | 0.623034 | 5_1:-23963938 | None:intergenic |
| CAGTTACTATTAAAAGGCGA+GGG | 0.630067 | 5_1:+23964138 | Msa0724860:CDS |
| TGATAAGAACATACCGACAA+GGG | 0.630605 | 5_1:-23963193 | None:intergenic |
| CCCACACCATTGGTATGGCG+AGG | 0.633364 | 5_1:+23963938 | Msa0724860:CDS |
| ACAACCGAGGCTGCGTTACG+AGG | 0.637956 | 5_1:-23962249 | None:intergenic |
| TAGTGATCAAGTGTTAGTTG+AGG | 0.665046 | 5_1:-23962159 | None:intergenic |
| GAAGTGAAGCCGAACAACCG+AGG | 0.665422 | 5_1:-23962262 | None:intergenic |
| ATGATAAGAACATACCGACA+AGG | 0.669642 | 5_1:-23963194 | None:intergenic |
| TCTATTTGTCCACCAATTGG+GGG | 0.671500 | 5_1:+23964051 | Msa0724860:CDS |
| CCATATTGGGATGTTCCTGT+GGG | 0.672124 | 5_1:+23963045 | Msa0724860:CDS |
| CAGCACAAGAAACAACTCCA+GGG | 0.694829 | 5_1:-23962883 | None:intergenic |
| ATTTGGGAATGATAGAAACG+AGG | 0.698846 | 5_1:-23963134 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGTTTGAGAAAAAAAAA+TGG | + | chr5_1:23963404-23963423 | Msa0724860:intron | 15.0% |
| !!! | ATTAGTTTGAGAAAAAAAAA+TGG | + | chr5_1:23963404-23963423 | Msa0724860:intron | 15.0% |
| !!! | AAAACAAATTTTGACAGAAA+TGG | - | chr5_1:23962081-23962100 | None:intergenic | 20.0% |
| !!! | TTACATATTGTTCTTTTGTT+TGG | + | chr5_1:23962102-23962121 | Msa0724860:CDS | 20.0% |
| !!! | AATATGTCTAACTTTGAAAT+AGG | - | chr5_1:23962378-23962397 | None:intergenic | 20.0% |
| !! | CAAATTTATCTCTCAATTAA+AGG | - | chr5_1:23962493-23962512 | None:intergenic | 20.0% |
| !! | CTTTAATTGAGAGATAAATT+TGG | + | chr5_1:23962491-23962510 | Msa0724860:intron | 20.0% |
| !! | AAAAATTTCAGAAGCTAATA+TGG | + | chr5_1:23962523-23962542 | Msa0724860:intron | 20.0% |
| !!! | TAATGTAGCTTTACTATATT+TGG | - | chr5_1:23962649-23962668 | None:intergenic | 20.0% |
| !! | ATCATAGGAAAATTATATTG+TGG | + | chr5_1:23963250-23963269 | Msa0724860:intron | 20.0% |
| !!! | AATTTTCGATCAAGAATATA+CGG | + | chr5_1:23963967-23963986 | Msa0724860:CDS | 20.0% |
| !!! | AAAACAAATTTTGACAGAAA+TGG | - | chr5_1:23962081-23962100 | None:intergenic | 20.0% |
| !!! | TTACATATTGTTCTTTTGTT+TGG | + | chr5_1:23962102-23962121 | Msa0724860:CDS | 20.0% |
| !!! | AATATGTCTAACTTTGAAAT+AGG | - | chr5_1:23962378-23962397 | None:intergenic | 20.0% |
| !! | CAAATTTATCTCTCAATTAA+AGG | - | chr5_1:23962493-23962512 | None:intergenic | 20.0% |
| !! | CTTTAATTGAGAGATAAATT+TGG | + | chr5_1:23962491-23962510 | Msa0724860:intron | 20.0% |
| !! | AAAAATTTCAGAAGCTAATA+TGG | + | chr5_1:23962523-23962542 | Msa0724860:intron | 20.0% |
| !!! | TAATGTAGCTTTACTATATT+TGG | - | chr5_1:23962649-23962668 | None:intergenic | 20.0% |
| !! | ATCATAGGAAAATTATATTG+TGG | + | chr5_1:23963250-23963269 | Msa0724860:intron | 20.0% |
| !!! | AATTTTCGATCAAGAATATA+CGG | + | chr5_1:23963967-23963986 | Msa0724860:CDS | 20.0% |
| ! | CTCTAATAATACACTAACAA+TGG | + | chr5_1:23962050-23962069 | Msa0724860:exon | 25.0% |
| ! | GCAATAATTACAAGGAAAAA+AGG | - | chr5_1:23962320-23962339 | None:intergenic | 25.0% |
| ! | AAACAGAAGCAATAATTACA+AGG | - | chr5_1:23962328-23962347 | None:intergenic | 25.0% |
| !!! | GGTTGTGATTTAATTTTTGA+AGG | + | chr5_1:23962544-23962563 | Msa0724860:intron | 25.0% |
| ! | ATCAAAATGTTGAATGAAAC+AGG | + | chr5_1:23962579-23962598 | Msa0724860:intron | 25.0% |
| !! | CTATATTTGGAGTAAAACTT+AGG | - | chr5_1:23962636-23962655 | None:intergenic | 25.0% |
| !! | ATTTTCTTTATCTCCTCAAT+AGG | - | chr5_1:23962699-23962718 | None:intergenic | 25.0% |
| ! | CCAATAACTTATATAAGACA+AGG | - | chr5_1:23962980-23962999 | None:intergenic | 25.0% |
| ! | CCTTGTCTTATATAAGTTAT+TGG | + | chr5_1:23962977-23962996 | Msa0724860:intron | 25.0% |
| !!! | TTTGTCCTTTGATTTTTTGT+AGG | + | chr5_1:23963014-23963033 | Msa0724860:intron | 25.0% |
| ! | ATTCCCAAATTTCTTTATCA+AGG | + | chr5_1:23963147-23963166 | Msa0724860:CDS | 25.0% |
| !!! | CATTGATTTACAACTTAGAT+AGG | + | chr5_1:23963214-23963233 | Msa0724860:intron | 25.0% |
| ! | TGTTTGTTCTACAAAAACAA+AGG | - | chr5_1:23963471-23963490 | None:intergenic | 25.0% |
| ! | GAATGATCATAAATCAAAGA+AGG | - | chr5_1:23963621-23963640 | None:intergenic | 25.0% |
| ! | AAATAACAAACCAAATTGCA+TGG | + | chr5_1:23963753-23963772 | Msa0724860:intron | 25.0% |
| ! | ATTATTTATGCCATGCAATT+TGG | - | chr5_1:23963766-23963785 | None:intergenic | 25.0% |
| !!! | AGTTATTGACTTTTATTGCA+AGG | - | chr5_1:23963824-23963843 | None:intergenic | 25.0% |
| ! | TTGCAATAAAAGTCAATAAC+TGG | + | chr5_1:23963823-23963842 | Msa0724860:intron | 25.0% |
| !!! | AATTACTTTTACAACTACCT+AGG | - | chr5_1:23963862-23963881 | None:intergenic | 25.0% |
| ! | AATTTATATAGCACGCAATA+AGG | - | chr5_1:23963894-23963913 | None:intergenic | 25.0% |
| ! | TTCTACCAGTTACTATTAAA+AGG | + | chr5_1:23964132-23964151 | Msa0724860:CDS | 25.0% |
| ! | CTCTAATAATACACTAACAA+TGG | + | chr5_1:23962050-23962069 | Msa0724860:exon | 25.0% |
| ! | GCAATAATTACAAGGAAAAA+AGG | - | chr5_1:23962320-23962339 | None:intergenic | 25.0% |
| ! | AAACAGAAGCAATAATTACA+AGG | - | chr5_1:23962328-23962347 | None:intergenic | 25.0% |
| !!! | GGTTGTGATTTAATTTTTGA+AGG | + | chr5_1:23962544-23962563 | Msa0724860:intron | 25.0% |
| ! | ATCAAAATGTTGAATGAAAC+AGG | + | chr5_1:23962579-23962598 | Msa0724860:intron | 25.0% |
| !! | CTATATTTGGAGTAAAACTT+AGG | - | chr5_1:23962636-23962655 | None:intergenic | 25.0% |
| !! | ATTTTCTTTATCTCCTCAAT+AGG | - | chr5_1:23962699-23962718 | None:intergenic | 25.0% |
| ! | CCAATAACTTATATAAGACA+AGG | - | chr5_1:23962980-23962999 | None:intergenic | 25.0% |
| ! | CCTTGTCTTATATAAGTTAT+TGG | + | chr5_1:23962977-23962996 | Msa0724860:intron | 25.0% |
| !!! | TTTGTCCTTTGATTTTTTGT+AGG | + | chr5_1:23963014-23963033 | Msa0724860:intron | 25.0% |
| ! | ATTCCCAAATTTCTTTATCA+AGG | + | chr5_1:23963147-23963166 | Msa0724860:CDS | 25.0% |
| !!! | CATTGATTTACAACTTAGAT+AGG | + | chr5_1:23963214-23963233 | Msa0724860:intron | 25.0% |
| ! | TGTTTGTTCTACAAAAACAA+AGG | - | chr5_1:23963471-23963490 | None:intergenic | 25.0% |
| ! | GAATGATCATAAATCAAAGA+AGG | - | chr5_1:23963621-23963640 | None:intergenic | 25.0% |
| ! | AAATAACAAACCAAATTGCA+TGG | + | chr5_1:23963753-23963772 | Msa0724860:intron | 25.0% |
| ! | ATTATTTATGCCATGCAATT+TGG | - | chr5_1:23963766-23963785 | None:intergenic | 25.0% |
| !!! | AGTTATTGACTTTTATTGCA+AGG | - | chr5_1:23963824-23963843 | None:intergenic | 25.0% |
| ! | TTGCAATAAAAGTCAATAAC+TGG | + | chr5_1:23963823-23963842 | Msa0724860:intron | 25.0% |
| !!! | AATTACTTTTACAACTACCT+AGG | - | chr5_1:23963862-23963881 | None:intergenic | 25.0% |
| ! | AATTTATATAGCACGCAATA+AGG | - | chr5_1:23963894-23963913 | None:intergenic | 25.0% |
| ! | TTCTACCAGTTACTATTAAA+AGG | + | chr5_1:23964132-23964151 | Msa0724860:CDS | 25.0% |
| !! | ACATTTTAGTAGAATCGGTA+CGG | - | chr5_1:23962409-23962428 | None:intergenic | 30.0% |
| !! | TACCGATTCTACTAAAATGT+CGG | + | chr5_1:23962409-23962428 | Msa0724860:intron | 30.0% |
| TGTATATCTAAGAACCAATG+TGG | + | chr5_1:23962456-23962475 | Msa0724860:intron | 30.0% | |
| !! | AGGTATTTTTATCACCACAT+TGG | - | chr5_1:23962473-23962492 | None:intergenic | 30.0% |
| GGTTCATCTAATACTTTGAA+TGG | - | chr5_1:23962678-23962697 | None:intergenic | 30.0% | |
| AGTATTAGATGAACCTATTG+AGG | + | chr5_1:23962683-23962702 | Msa0724860:intron | 30.0% | |
| AAACTTGATGTTATGTGTTC+AGG | + | chr5_1:23962730-23962749 | Msa0724860:intron | 30.0% | |
| AACTTGATGTTATGTGTTCA+GGG | + | chr5_1:23962731-23962750 | Msa0724860:intron | 30.0% | |
| GATGATACATACACACTTAA+AGG | + | chr5_1:23962776-23962795 | Msa0724860:CDS | 30.0% | |
| !! | TTTCAAAGCCTTTTAAAGAG+TGG | - | chr5_1:23962826-23962845 | None:intergenic | 30.0% |
| !!! | TCCTTTGATTTTTTGTAGGT+TGG | + | chr5_1:23963018-23963037 | Msa0724860:intron | 30.0% |
| ACCAACCTACAAAAAATCAA+AGG | - | chr5_1:23963022-23963041 | None:intergenic | 30.0% | |
| !!! | TTTGATTTTTTGTAGGTTGG+TGG | + | chr5_1:23963021-23963040 | Msa0724860:intron | 30.0% |
| AGGCCTTGATAAAGAAATTT+GGG | - | chr5_1:23963153-23963172 | None:intergenic | 30.0% | |
| TAGGCCTTGATAAAGAAATT+TGG | - | chr5_1:23963154-23963173 | None:intergenic | 30.0% | |
| ! | ATATTGTGGACTGTTTAGAT+AGG | + | chr5_1:23963264-23963283 | Msa0724860:intron | 30.0% |
| TTCTCAAACTAATACCAATC+AGG | - | chr5_1:23963397-23963416 | None:intergenic | 30.0% | |
| ! | TCACTGAGTTTCTATTTTCA+AGG | + | chr5_1:23963531-23963550 | Msa0724860:intron | 30.0% |
| ! | CACTGAGTTTCTATTTTCAA+GGG | + | chr5_1:23963532-23963551 | Msa0724860:intron | 30.0% |
| !! | ACTGAGTTTCTATTTTCAAG+GGG | + | chr5_1:23963533-23963552 | Msa0724860:intron | 30.0% |
| AATTACACAAAACACACCAA+TGG | - | chr5_1:23963571-23963590 | None:intergenic | 30.0% | |
| TGATCATAAATCAAAGAAGG+CGG | - | chr5_1:23963618-23963637 | None:intergenic | 30.0% | |
| TGTACAAAACAATCTGTGTA+AGG | - | chr5_1:23963673-23963692 | None:intergenic | 30.0% | |
| TACCAAAATAATCCTCATCT+CGG | + | chr5_1:23963713-23963732 | Msa0724860:intron | 30.0% | |
| ! | TTGAACTGATTATCTGAGAT+TGG | - | chr5_1:23964021-23964040 | None:intergenic | 30.0% |
| AAATCTATTTGTCCACCAAT+TGG | + | chr5_1:23964048-23964067 | Msa0724860:CDS | 30.0% | |
| AATCTATTTGTCCACCAATT+GGG | + | chr5_1:23964049-23964068 | Msa0724860:CDS | 30.0% | |
| AGACAATAACATAACAGCAA+TGG | + | chr5_1:23964077-23964096 | Msa0724860:CDS | 30.0% | |
| AAAGAATTGTCGAAGAGATT+AGG | - | chr5_1:23964114-23964133 | None:intergenic | 30.0% | |
| TCTGATTCAATGGTCAAAAT+GGG | + | chr5_1:23964267-23964286 | Msa0724860:CDS | 30.0% | |
| !! | ACATTTTAGTAGAATCGGTA+CGG | - | chr5_1:23962409-23962428 | None:intergenic | 30.0% |
| !! | TACCGATTCTACTAAAATGT+CGG | + | chr5_1:23962409-23962428 | Msa0724860:intron | 30.0% |
| TGTATATCTAAGAACCAATG+TGG | + | chr5_1:23962456-23962475 | Msa0724860:intron | 30.0% | |
| !! | AGGTATTTTTATCACCACAT+TGG | - | chr5_1:23962473-23962492 | None:intergenic | 30.0% |
| GGTTCATCTAATACTTTGAA+TGG | - | chr5_1:23962678-23962697 | None:intergenic | 30.0% | |
| AGTATTAGATGAACCTATTG+AGG | + | chr5_1:23962683-23962702 | Msa0724860:intron | 30.0% | |
| AAACTTGATGTTATGTGTTC+AGG | + | chr5_1:23962730-23962749 | Msa0724860:intron | 30.0% | |
| AACTTGATGTTATGTGTTCA+GGG | + | chr5_1:23962731-23962750 | Msa0724860:intron | 30.0% | |
| GATGATACATACACACTTAA+AGG | + | chr5_1:23962776-23962795 | Msa0724860:CDS | 30.0% | |
| !! | TTTCAAAGCCTTTTAAAGAG+TGG | - | chr5_1:23962826-23962845 | None:intergenic | 30.0% |
| !!! | TCCTTTGATTTTTTGTAGGT+TGG | + | chr5_1:23963018-23963037 | Msa0724860:intron | 30.0% |
| ACCAACCTACAAAAAATCAA+AGG | - | chr5_1:23963022-23963041 | None:intergenic | 30.0% | |
| !!! | TTTGATTTTTTGTAGGTTGG+TGG | + | chr5_1:23963021-23963040 | Msa0724860:intron | 30.0% |
| AGGCCTTGATAAAGAAATTT+GGG | - | chr5_1:23963153-23963172 | None:intergenic | 30.0% | |
| TAGGCCTTGATAAAGAAATT+TGG | - | chr5_1:23963154-23963173 | None:intergenic | 30.0% | |
| ! | ATATTGTGGACTGTTTAGAT+AGG | + | chr5_1:23963264-23963283 | Msa0724860:intron | 30.0% |
| TTCTCAAACTAATACCAATC+AGG | - | chr5_1:23963397-23963416 | None:intergenic | 30.0% | |
| ! | TCACTGAGTTTCTATTTTCA+AGG | + | chr5_1:23963531-23963550 | Msa0724860:intron | 30.0% |
| ! | CACTGAGTTTCTATTTTCAA+GGG | + | chr5_1:23963532-23963551 | Msa0724860:intron | 30.0% |
| !! | ACTGAGTTTCTATTTTCAAG+GGG | + | chr5_1:23963533-23963552 | Msa0724860:intron | 30.0% |
| AATTACACAAAACACACCAA+TGG | - | chr5_1:23963571-23963590 | None:intergenic | 30.0% | |
| TGATCATAAATCAAAGAAGG+CGG | - | chr5_1:23963618-23963637 | None:intergenic | 30.0% | |
| TGTACAAAACAATCTGTGTA+AGG | - | chr5_1:23963673-23963692 | None:intergenic | 30.0% | |
| TACCAAAATAATCCTCATCT+CGG | + | chr5_1:23963713-23963732 | Msa0724860:intron | 30.0% | |
| ! | TTGAACTGATTATCTGAGAT+TGG | - | chr5_1:23964021-23964040 | None:intergenic | 30.0% |
| AAATCTATTTGTCCACCAAT+TGG | + | chr5_1:23964048-23964067 | Msa0724860:CDS | 30.0% | |
| AATCTATTTGTCCACCAATT+GGG | + | chr5_1:23964049-23964068 | Msa0724860:CDS | 30.0% | |
| AGACAATAACATAACAGCAA+TGG | + | chr5_1:23964077-23964096 | Msa0724860:CDS | 30.0% | |
| AAAGAATTGTCGAAGAGATT+AGG | - | chr5_1:23964114-23964133 | None:intergenic | 30.0% | |
| TCTGATTCAATGGTCAAAAT+GGG | + | chr5_1:23964267-23964286 | Msa0724860:CDS | 30.0% | |
| !!! | GTTCTTTTGTTTGGCTTTCT+TGG | + | chr5_1:23962111-23962130 | Msa0724860:CDS | 35.0% |
| TAGTGATCAAGTGTTAGTTG+AGG | - | chr5_1:23962162-23962181 | None:intergenic | 35.0% | |
| CTAACAATGTCAAACACAGT+AGG | - | chr5_1:23962198-23962217 | None:intergenic | 35.0% | |
| CTACTGTGTTTGACATTGTT+AGG | + | chr5_1:23962196-23962215 | Msa0724860:CDS | 35.0% | |
| TGACATTGTTAGGAAGCAAA+TGG | + | chr5_1:23962206-23962225 | Msa0724860:CDS | 35.0% | |
| TAGGAAGCAAATGGAATGTT+CGG | + | chr5_1:23962215-23962234 | Msa0724860:CDS | 35.0% | |
| !! | GACCGACATTTTAGTAGAAT+CGG | - | chr5_1:23962414-23962433 | None:intergenic | 35.0% |
| AAAATGTCGGTCATCATCTT+CGG | + | chr5_1:23962422-23962441 | Msa0724860:intron | 35.0% | |
| ACCAACATCCACTCTTTAAA+AGG | + | chr5_1:23962815-23962834 | Msa0724860:CDS | 35.0% | |
| TGCTGATATTCTCACAATTG+CGG | + | chr5_1:23962901-23962920 | Msa0724860:CDS | 35.0% | |
| ATTTGGGAATGATAGAAACG+AGG | - | chr5_1:23963137-23963156 | None:intergenic | 35.0% | |
| TGATAAGAACATACCGACAA+GGG | - | chr5_1:23963196-23963215 | None:intergenic | 35.0% | |
| ATGATAAGAACATACCGACA+AGG | - | chr5_1:23963197-23963216 | None:intergenic | 35.0% | |
| ! | GGAGAAGTGTATCTTATCAT+AGG | + | chr5_1:23963235-23963254 | Msa0724860:intron | 35.0% |
| !!! | TTCGGGTGATTTTCAAGTAT+TGG | - | chr5_1:23963304-23963323 | None:intergenic | 35.0% |
| TTGTAGAACAAACATCCATC+AGG | + | chr5_1:23963477-23963496 | Msa0724860:intron | 35.0% | |
| CTTGTTCTCATTCATATGTG+AGG | - | chr5_1:23963509-23963528 | None:intergenic | 35.0% | |
| CTCACATATGAATGAGAACA+AGG | + | chr5_1:23963507-23963526 | Msa0724860:intron | 35.0% | |
| GATCATAAATCAAAGAAGGC+GGG | - | chr5_1:23963617-23963636 | None:intergenic | 35.0% | |
| ! | TTGGTGGACAAATAGATTTC+AGG | - | chr5_1:23964047-23964066 | None:intergenic | 35.0% |
| ATCTATTTGTCCACCAATTG+GGG | + | chr5_1:23964050-23964069 | Msa0724860:CDS | 35.0% | |
| CAGTTACTATTAAAAGGCGA+GGG | + | chr5_1:23964138-23964157 | Msa0724860:CDS | 35.0% | |
| CTCTGATTCAATGGTCAAAA+TGG | + | chr5_1:23964266-23964285 | Msa0724860:CDS | 35.0% | |
| AATTCAGAAAGCTTCATCAC+TGG | + | chr5_1:23964300-23964319 | Msa0724860:CDS | 35.0% | |
| !!! | GTTCTTTTGTTTGGCTTTCT+TGG | + | chr5_1:23962111-23962130 | Msa0724860:CDS | 35.0% |
| TAGTGATCAAGTGTTAGTTG+AGG | - | chr5_1:23962162-23962181 | None:intergenic | 35.0% | |
| CTAACAATGTCAAACACAGT+AGG | - | chr5_1:23962198-23962217 | None:intergenic | 35.0% | |
| CTACTGTGTTTGACATTGTT+AGG | + | chr5_1:23962196-23962215 | Msa0724860:CDS | 35.0% | |
| TGACATTGTTAGGAAGCAAA+TGG | + | chr5_1:23962206-23962225 | Msa0724860:CDS | 35.0% | |
| TAGGAAGCAAATGGAATGTT+CGG | + | chr5_1:23962215-23962234 | Msa0724860:CDS | 35.0% | |
| !! | GACCGACATTTTAGTAGAAT+CGG | - | chr5_1:23962414-23962433 | None:intergenic | 35.0% |
| AAAATGTCGGTCATCATCTT+CGG | + | chr5_1:23962422-23962441 | Msa0724860:intron | 35.0% | |
| ACCAACATCCACTCTTTAAA+AGG | + | chr5_1:23962815-23962834 | Msa0724860:CDS | 35.0% | |
| TGCTGATATTCTCACAATTG+CGG | + | chr5_1:23962901-23962920 | Msa0724860:CDS | 35.0% | |
| ATTTGGGAATGATAGAAACG+AGG | - | chr5_1:23963137-23963156 | None:intergenic | 35.0% | |
| TGATAAGAACATACCGACAA+GGG | - | chr5_1:23963196-23963215 | None:intergenic | 35.0% | |
| ATGATAAGAACATACCGACA+AGG | - | chr5_1:23963197-23963216 | None:intergenic | 35.0% | |
| ! | GGAGAAGTGTATCTTATCAT+AGG | + | chr5_1:23963235-23963254 | Msa0724860:intron | 35.0% |
| !!! | TTCGGGTGATTTTCAAGTAT+TGG | - | chr5_1:23963304-23963323 | None:intergenic | 35.0% |
| TTGTAGAACAAACATCCATC+AGG | + | chr5_1:23963477-23963496 | Msa0724860:intron | 35.0% | |
| CTTGTTCTCATTCATATGTG+AGG | - | chr5_1:23963509-23963528 | None:intergenic | 35.0% | |
| CTCACATATGAATGAGAACA+AGG | + | chr5_1:23963507-23963526 | Msa0724860:intron | 35.0% | |
| GATCATAAATCAAAGAAGGC+GGG | - | chr5_1:23963617-23963636 | None:intergenic | 35.0% | |
| ! | TTGGTGGACAAATAGATTTC+AGG | - | chr5_1:23964047-23964066 | None:intergenic | 35.0% |
| ATCTATTTGTCCACCAATTG+GGG | + | chr5_1:23964050-23964069 | Msa0724860:CDS | 35.0% | |
| CAGTTACTATTAAAAGGCGA+GGG | + | chr5_1:23964138-23964157 | Msa0724860:CDS | 35.0% | |
| CTCTGATTCAATGGTCAAAA+TGG | + | chr5_1:23964266-23964285 | Msa0724860:CDS | 35.0% | |
| AATTCAGAAAGCTTCATCAC+TGG | + | chr5_1:23964300-23964319 | Msa0724860:CDS | 35.0% | |
| AATGTCAAACACAGTAGGAC+AGG | - | chr5_1:23962193-23962212 | None:intergenic | 40.0% | |
| ! | CTTCCATGACTGCTTTATTC+AGG | + | chr5_1:23962281-23962300 | Msa0724860:CDS | 40.0% |
| AGACCTGAATAAAGCAGTCA+TGG | - | chr5_1:23962287-23962306 | None:intergenic | 40.0% | |
| AGTAGAATCGGTACGGTAAA+TGG | - | chr5_1:23962402-23962421 | None:intergenic | 40.0% | |
| !! | GCCTTTTAAAGAGTGGATGT+TGG | - | chr5_1:23962819-23962838 | None:intergenic | 40.0% |
| !! | TTCATCAGGTGTTGGAAGAT+TGG | - | chr5_1:23963112-23963131 | None:intergenic | 40.0% |
| ATAGAAACGAGGCTTTCATC+AGG | - | chr5_1:23963126-23963145 | None:intergenic | 40.0% | |
| TTATCAAGGCCTATCAGTCA+CGG | + | chr5_1:23963161-23963180 | Msa0724860:CDS | 40.0% | |
| AATCACCCGAAACTACAACA+TGG | + | chr5_1:23963313-23963332 | Msa0724860:intron | 40.0% | |
| TGAGTCCATGTTGTAGTTTC+GGG | - | chr5_1:23963321-23963340 | None:intergenic | 40.0% | |
| GTGAGTCCATGTTGTAGTTT+CGG | - | chr5_1:23963322-23963341 | None:intergenic | 40.0% | |
| TGTCTCACTCATTAAGACAG+AGG | - | chr5_1:23963370-23963389 | None:intergenic | 40.0% | |
| GTTCTCATTCATATGTGAGG+CGG | - | chr5_1:23963506-23963525 | None:intergenic | 40.0% | |
| !! | GAGTTTCTATTTTCAAGGGG+CGG | + | chr5_1:23963536-23963555 | Msa0724860:intron | 40.0% |
| ! | AGCCGAGATGAGGATTATTT+TGG | - | chr5_1:23963718-23963737 | None:intergenic | 40.0% |
| ATTTCATTTGAGCCGAGATG+AGG | - | chr5_1:23963728-23963747 | None:intergenic | 40.0% | |
| TGCAAGGCAATGTGAAGAAA+TGG | - | chr5_1:23963808-23963827 | None:intergenic | 40.0% | |
| ACAACTACCTAGGAATCTTG+AGG | - | chr5_1:23963852-23963871 | None:intergenic | 40.0% | |
| TTTCTGATCACAACACATGC+AGG | + | chr5_1:23963913-23963932 | Msa0724860:intron | 40.0% | |
| TCTATTTGTCCACCAATTGG+GGG | + | chr5_1:23964051-23964070 | Msa0724860:CDS | 40.0% | |
| ! | CCTCGCCTTTTAATAGTAAC+TGG | - | chr5_1:23964140-23964159 | None:intergenic | 40.0% |
| CCAGTTACTATTAAAAGGCG+AGG | + | chr5_1:23964137-23964156 | Msa0724860:CDS | 40.0% | |
| GAAATGTACTCGAGTGTGTT+CGG | + | chr5_1:23964180-23964199 | Msa0724860:CDS | 40.0% | |
| CCATTGAATCAGAGAATTGC+TGG | - | chr5_1:23964260-23964279 | None:intergenic | 40.0% | |
| CCAGCAATTCTCTGATTCAA+TGG | + | chr5_1:23964257-23964276 | Msa0724860:CDS | 40.0% | |
| GCTTCATCACTGGAGAAATT+AGG | + | chr5_1:23964310-23964329 | Msa0724860:CDS | 40.0% | |
| AATGTCAAACACAGTAGGAC+AGG | - | chr5_1:23962193-23962212 | None:intergenic | 40.0% | |
| ! | CTTCCATGACTGCTTTATTC+AGG | + | chr5_1:23962281-23962300 | Msa0724860:CDS | 40.0% |
| AGACCTGAATAAAGCAGTCA+TGG | - | chr5_1:23962287-23962306 | None:intergenic | 40.0% | |
| AGTAGAATCGGTACGGTAAA+TGG | - | chr5_1:23962402-23962421 | None:intergenic | 40.0% | |
| !! | GCCTTTTAAAGAGTGGATGT+TGG | - | chr5_1:23962819-23962838 | None:intergenic | 40.0% |
| !! | TTCATCAGGTGTTGGAAGAT+TGG | - | chr5_1:23963112-23963131 | None:intergenic | 40.0% |
| ATAGAAACGAGGCTTTCATC+AGG | - | chr5_1:23963126-23963145 | None:intergenic | 40.0% | |
| TTATCAAGGCCTATCAGTCA+CGG | + | chr5_1:23963161-23963180 | Msa0724860:CDS | 40.0% | |
| AATCACCCGAAACTACAACA+TGG | + | chr5_1:23963313-23963332 | Msa0724860:intron | 40.0% | |
| TGAGTCCATGTTGTAGTTTC+GGG | - | chr5_1:23963321-23963340 | None:intergenic | 40.0% | |
| GTGAGTCCATGTTGTAGTTT+CGG | - | chr5_1:23963322-23963341 | None:intergenic | 40.0% | |
| TGTCTCACTCATTAAGACAG+AGG | - | chr5_1:23963370-23963389 | None:intergenic | 40.0% | |
| GTTCTCATTCATATGTGAGG+CGG | - | chr5_1:23963506-23963525 | None:intergenic | 40.0% | |
| !! | GAGTTTCTATTTTCAAGGGG+CGG | + | chr5_1:23963536-23963555 | Msa0724860:intron | 40.0% |
| ! | AGCCGAGATGAGGATTATTT+TGG | - | chr5_1:23963718-23963737 | None:intergenic | 40.0% |
| ATTTCATTTGAGCCGAGATG+AGG | - | chr5_1:23963728-23963747 | None:intergenic | 40.0% | |
| TGCAAGGCAATGTGAAGAAA+TGG | - | chr5_1:23963808-23963827 | None:intergenic | 40.0% | |
| ACAACTACCTAGGAATCTTG+AGG | - | chr5_1:23963852-23963871 | None:intergenic | 40.0% | |
| TTTCTGATCACAACACATGC+AGG | + | chr5_1:23963913-23963932 | Msa0724860:intron | 40.0% | |
| TCTATTTGTCCACCAATTGG+GGG | + | chr5_1:23964051-23964070 | Msa0724860:CDS | 40.0% | |
| ! | CCTCGCCTTTTAATAGTAAC+TGG | - | chr5_1:23964140-23964159 | None:intergenic | 40.0% |
| CCAGTTACTATTAAAAGGCG+AGG | + | chr5_1:23964137-23964156 | Msa0724860:CDS | 40.0% | |
| GAAATGTACTCGAGTGTGTT+CGG | + | chr5_1:23964180-23964199 | Msa0724860:CDS | 40.0% | |
| CCATTGAATCAGAGAATTGC+TGG | - | chr5_1:23964260-23964279 | None:intergenic | 40.0% | |
| CCAGCAATTCTCTGATTCAA+TGG | + | chr5_1:23964257-23964276 | Msa0724860:CDS | 40.0% | |
| GCTTCATCACTGGAGAAATT+AGG | + | chr5_1:23964310-23964329 | Msa0724860:CDS | 40.0% | |
| TTATGTGTTCAGGGTTGCGA+TGG | + | chr5_1:23962740-23962759 | Msa0724860:intron | 45.0% | |
| ! | TTTGTTGAATCAGAGTGCCC+TGG | + | chr5_1:23962866-23962885 | Msa0724860:CDS | 45.0% |
| CAGCACAAGAAACAACTCCA+GGG | - | chr5_1:23962886-23962905 | None:intergenic | 45.0% | |
| TCAGCACAAGAAACAACTCC+AGG | - | chr5_1:23962887-23962906 | None:intergenic | 45.0% | |
| !! | TGTAGGTTGGTGGACCATAT+TGG | + | chr5_1:23963031-23963050 | Msa0724860:intron | 45.0% |
| !! | GTAGGTTGGTGGACCATATT+GGG | + | chr5_1:23963032-23963051 | Msa0724860:intron | 45.0% |
| ACCATATTGGGATGTTCCTG+TGG | + | chr5_1:23963044-23963063 | Msa0724860:CDS | 45.0% | |
| CCATATTGGGATGTTCCTGT+GGG | + | chr5_1:23963045-23963064 | Msa0724860:CDS | 45.0% | |
| ACAGAATCTTTCCTTCCCAC+AGG | - | chr5_1:23963063-23963082 | None:intergenic | 45.0% | |
| !! | ATCAGGTGTTGGAAGATTGG+TGG | - | chr5_1:23963109-23963128 | None:intergenic | 45.0% |
| CAACCATATCCGTGACTGAT+AGG | - | chr5_1:23963173-23963192 | None:intergenic | 45.0% | |
| CAGAGGACTATGAGCTTCTT+CGG | - | chr5_1:23963353-23963372 | None:intergenic | 45.0% | |
| GAGTGAGACAGTAACCTGAT+TGG | + | chr5_1:23963380-23963399 | Msa0724860:intron | 45.0% | |
| CTGGTTTCCTCAAGATTCCT+AGG | + | chr5_1:23963842-23963861 | Msa0724860:intron | 45.0% | |
| TTATTGTCTCCTCCCCCAAT+TGG | - | chr5_1:23964066-23964085 | None:intergenic | 45.0% | |
| TTATGTGTTCAGGGTTGCGA+TGG | + | chr5_1:23962740-23962759 | Msa0724860:intron | 45.0% | |
| ! | TTTGTTGAATCAGAGTGCCC+TGG | + | chr5_1:23962866-23962885 | Msa0724860:CDS | 45.0% |
| CAGCACAAGAAACAACTCCA+GGG | - | chr5_1:23962886-23962905 | None:intergenic | 45.0% | |
| TCAGCACAAGAAACAACTCC+AGG | - | chr5_1:23962887-23962906 | None:intergenic | 45.0% | |
| !! | TGTAGGTTGGTGGACCATAT+TGG | + | chr5_1:23963031-23963050 | Msa0724860:intron | 45.0% |
| !! | GTAGGTTGGTGGACCATATT+GGG | + | chr5_1:23963032-23963051 | Msa0724860:intron | 45.0% |
| ACCATATTGGGATGTTCCTG+TGG | + | chr5_1:23963044-23963063 | Msa0724860:CDS | 45.0% | |
| CCATATTGGGATGTTCCTGT+GGG | + | chr5_1:23963045-23963064 | Msa0724860:CDS | 45.0% | |
| ACAGAATCTTTCCTTCCCAC+AGG | - | chr5_1:23963063-23963082 | None:intergenic | 45.0% | |
| !! | ATCAGGTGTTGGAAGATTGG+TGG | - | chr5_1:23963109-23963128 | None:intergenic | 45.0% |
| CAACCATATCCGTGACTGAT+AGG | - | chr5_1:23963173-23963192 | None:intergenic | 45.0% | |
| CAGAGGACTATGAGCTTCTT+CGG | - | chr5_1:23963353-23963372 | None:intergenic | 45.0% | |
| GAGTGAGACAGTAACCTGAT+TGG | + | chr5_1:23963380-23963399 | Msa0724860:intron | 45.0% | |
| CTGGTTTCCTCAAGATTCCT+AGG | + | chr5_1:23963842-23963861 | Msa0724860:intron | 45.0% | |
| TTATTGTCTCCTCCCCCAAT+TGG | - | chr5_1:23964066-23964085 | None:intergenic | 45.0% | |
| TGTTCAGGGTTGCGATGGAT+CGG | + | chr5_1:23962745-23962764 | Msa0724860:intron | 50.0% | |
| GGCTAGAGATGCTGTGATTC+TGG | + | chr5_1:23962922-23962941 | Msa0724860:CDS | 50.0% | |
| CCCACAGGAACATCCCAATA+TGG | - | chr5_1:23963048-23963067 | None:intergenic | 50.0% | |
| ATTGGGATGTTCCTGTGGGA+AGG | + | chr5_1:23963049-23963068 | Msa0724860:CDS | 50.0% | |
| ACGAGGCTTTCATCAGGTGT+TGG | - | chr5_1:23963120-23963139 | None:intergenic | 50.0% | |
| AGGCCTATCAGTCACGGATA+TGG | + | chr5_1:23963167-23963186 | Msa0724860:CDS | 50.0% | |
| ACGGATATGGTTGCCCTTGT+CGG | + | chr5_1:23963180-23963199 | Msa0724860:CDS | 50.0% | |
| AGGATCCCACACCATTGGTA+TGG | + | chr5_1:23963933-23963952 | Msa0724860:intron | 50.0% | |
| TTGACACCTCGCCATACCAA+TGG | - | chr5_1:23963947-23963966 | None:intergenic | 50.0% | |
| ATTTGTCCACCAATTGGGGG+AGG | + | chr5_1:23964054-23964073 | Msa0724860:CDS | 50.0% | |
| TGTTCAGGGTTGCGATGGAT+CGG | + | chr5_1:23962745-23962764 | Msa0724860:intron | 50.0% | |
| GGCTAGAGATGCTGTGATTC+TGG | + | chr5_1:23962922-23962941 | Msa0724860:CDS | 50.0% | |
| CCCACAGGAACATCCCAATA+TGG | - | chr5_1:23963048-23963067 | None:intergenic | 50.0% | |
| ATTGGGATGTTCCTGTGGGA+AGG | + | chr5_1:23963049-23963068 | Msa0724860:CDS | 50.0% | |
| ACGAGGCTTTCATCAGGTGT+TGG | - | chr5_1:23963120-23963139 | None:intergenic | 50.0% | |
| AGGCCTATCAGTCACGGATA+TGG | + | chr5_1:23963167-23963186 | Msa0724860:CDS | 50.0% | |
| ACGGATATGGTTGCCCTTGT+CGG | + | chr5_1:23963180-23963199 | Msa0724860:CDS | 50.0% | |
| AGGATCCCACACCATTGGTA+TGG | + | chr5_1:23963933-23963952 | Msa0724860:intron | 50.0% | |
| TTGACACCTCGCCATACCAA+TGG | - | chr5_1:23963947-23963966 | None:intergenic | 50.0% | |
| ATTTGTCCACCAATTGGGGG+AGG | + | chr5_1:23964054-23964073 | Msa0724860:CDS | 50.0% | |
| TGAACCTCGTAACGCAGCCT+CGG | + | chr5_1:23962245-23962264 | Msa0724860:CDS | 55.0% | |
| GTAACGCAGCCTCGGTTGTT+CGG | + | chr5_1:23962253-23962272 | Msa0724860:CDS | 55.0% | |
| GAAGTGAAGCCGAACAACCG+AGG | - | chr5_1:23962265-23962284 | None:intergenic | 55.0% | |
| TATGTGAGGCGGTGACCTGA+TGG | - | chr5_1:23963495-23963514 | None:intergenic | 55.0% | |
| GGGGCGGCATTATTCACCAT+TGG | + | chr5_1:23963552-23963571 | Msa0724860:intron | 55.0% | |
| CATGCAGGATCCCACACCAT+TGG | + | chr5_1:23963928-23963947 | Msa0724860:intron | 55.0% | |
| CCTCGCCATACCAATGGTGT+GGG | - | chr5_1:23963941-23963960 | None:intergenic | 55.0% | |
| ACCTCGCCATACCAATGGTG+TGG | - | chr5_1:23963942-23963961 | None:intergenic | 55.0% | |
| TTGTCTCCTCCCCCAATTGG+TGG | - | chr5_1:23964063-23964082 | None:intergenic | 55.0% | |
| TGAACCTCGTAACGCAGCCT+CGG | + | chr5_1:23962245-23962264 | Msa0724860:CDS | 55.0% | |
| GTAACGCAGCCTCGGTTGTT+CGG | + | chr5_1:23962253-23962272 | Msa0724860:CDS | 55.0% | |
| GAAGTGAAGCCGAACAACCG+AGG | - | chr5_1:23962265-23962284 | None:intergenic | 55.0% | |
| TATGTGAGGCGGTGACCTGA+TGG | - | chr5_1:23963495-23963514 | None:intergenic | 55.0% | |
| GGGGCGGCATTATTCACCAT+TGG | + | chr5_1:23963552-23963571 | Msa0724860:intron | 55.0% | |
| CATGCAGGATCCCACACCAT+TGG | + | chr5_1:23963928-23963947 | Msa0724860:intron | 55.0% | |
| CCTCGCCATACCAATGGTGT+GGG | - | chr5_1:23963941-23963960 | None:intergenic | 55.0% | |
| ACCTCGCCATACCAATGGTG+TGG | - | chr5_1:23963942-23963961 | None:intergenic | 55.0% | |
| TTGTCTCCTCCCCCAATTGG+TGG | - | chr5_1:23964063-23964082 | None:intergenic | 55.0% | |
| ACAACCGAGGCTGCGTTACG+AGG | - | chr5_1:23962252-23962271 | None:intergenic | 60.0% | |
| CCCACACCATTGGTATGGCG+AGG | + | chr5_1:23963938-23963957 | Msa0724860:CDS | 60.0% | |
| ACAACCGAGGCTGCGTTACG+AGG | - | chr5_1:23962252-23962271 | None:intergenic | 60.0% | |
| CCCACACCATTGGTATGGCG+AGG | + | chr5_1:23963938-23963957 | Msa0724860:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 23962030 | 23964359 | 23962030 | ID=Msa0724860;Name=Msa0724860 |
| chr5_1 | mRNA | 23962030 | 23964359 | 23962030 | ID=Msa0724860-mRNA-1;Parent=Msa0724860;Name=Msa0724860-mRNA-1;_AED=0.10;_eAED=0.10;_QI=39|1|0.75|1|1|1|4|0|338 |
| chr5_1 | exon | 23962030 | 23962302 | 23962030 | ID=Msa0724860-mRNA-1:exon:8811;Parent=Msa0724860-mRNA-1 |
| chr5_1 | exon | 23962752 | 23962943 | 23962752 | ID=Msa0724860-mRNA-1:exon:8812;Parent=Msa0724860-mRNA-1 |
| chr5_1 | exon | 23963036 | 23963201 | 23963036 | ID=Msa0724860-mRNA-1:exon:8813;Parent=Msa0724860-mRNA-1 |
| chr5_1 | exon | 23963935 | 23964359 | 23963935 | ID=Msa0724860-mRNA-1:exon:8814;Parent=Msa0724860-mRNA-1 |
| chr5_1 | five_prime_UTR | 23962030 | 23962068 | 23962030 | ID=Msa0724860-mRNA-1:five_prime_utr;Parent=Msa0724860-mRNA-1 |
| chr5_1 | CDS | 23962069 | 23962302 | 23962069 | ID=Msa0724860-mRNA-1:cds;Parent=Msa0724860-mRNA-1 |
| chr5_1 | CDS | 23962752 | 23962943 | 23962752 | ID=Msa0724860-mRNA-1:cds;Parent=Msa0724860-mRNA-1 |
| chr5_1 | CDS | 23963036 | 23963201 | 23963036 | ID=Msa0724860-mRNA-1:cds;Parent=Msa0724860-mRNA-1 |
| chr5_1 | CDS | 23963935 | 23964359 | 23963935 | ID=Msa0724860-mRNA-1:cds;Parent=Msa0724860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
