Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439250 | XP_013445246.1 | 96.154 | 156 | 6 | 0 | 1 | 156 | 1 | 156 | 5.80e-107 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439250 | sp|Q941R6|MLP31_ARATH | 35.294 | 153 | 95 | 4 | 3 | 152 | 20 | 171 | 9.92e-24 | 94.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439250 | I3SJ62 | 96.154 | 156 | 6 | 0 | 1 | 156 | 1 | 156 | 2.77e-107 | 311 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006080 | Msa1439250 | 0.803376 | 3.590699e-49 | -8.615850e-47 |
| Msa0011870 | Msa1439250 | 0.800016 | 1.756228e-48 | -8.615850e-47 |
| Msa0028690 | Msa1439250 | 0.808681 | 2.748042e-50 | -8.615850e-47 |
| Msa0032710 | Msa1439250 | 0.814200 | 1.738606e-51 | -8.615850e-47 |
| Msa0033220 | Msa1439250 | 0.814316 | 1.638907e-51 | -8.615850e-47 |
| Msa0045810 | Msa1439250 | 0.826339 | 2.864833e-54 | -8.615850e-47 |
| Msa0051980 | Msa1439250 | 0.826451 | 2.693304e-54 | -8.615850e-47 |
| Msa0052060 | Msa1439250 | 0.817172 | 3.783986e-52 | -8.615850e-47 |
| Msa0060410 | Msa1439250 | 0.801215 | 1.000328e-48 | -8.615850e-47 |
| Msa0060690 | Msa1439250 | 0.805402 | 1.358133e-49 | -8.615850e-47 |
| Msa0062190 | Msa1439250 | 0.801102 | 1.054879e-48 | -8.615850e-47 |
| Msa0063940 | Msa1439250 | 0.817966 | 2.506171e-52 | -8.615850e-47 |
| Msa0072180 | Msa1439250 | 0.821719 | 3.476936e-53 | -8.615850e-47 |
| Msa0092220 | Msa1439250 | 0.803059 | 4.176858e-49 | -8.615850e-47 |
| Msa0097010 | Msa1439250 | 0.832946 | 7.072325e-56 | -8.615850e-47 |
| Msa0101530 | Msa1439250 | 0.817545 | 3.119038e-52 | -8.615850e-47 |
| Msa0119240 | Msa1439250 | 0.808582 | 2.885106e-50 | -8.615850e-47 |
| Msa1357070 | Msa1439250 | 0.810659 | 1.032720e-50 | -8.615850e-47 |
| Msa1368390 | Msa1439250 | 0.819785 | 9.680215e-53 | -8.615850e-47 |
| Msa1384700 | Msa1439250 | 0.811230 | 7.766464e-51 | -8.615850e-47 |
| Msa1388720 | Msa1439250 | -0.810502 | 1.116761e-50 | -8.615850e-47 |
| Msa1389900 | Msa1439250 | 0.802991 | 4.314434e-49 | -8.615850e-47 |
| Msa1396200 | Msa1439250 | -0.817122 | 3.883397e-52 | -8.615850e-47 |
| Msa1407810 | Msa1439250 | 0.832359 | 9.889829e-56 | -8.615850e-47 |
| Msa1407840 | Msa1439250 | 0.800254 | 1.570839e-48 | -8.615850e-47 |
| Msa1408390 | Msa1439250 | 0.847257 | 1.296418e-59 | -8.615850e-47 |
| Msa1413450 | Msa1439250 | 0.813310 | 2.730389e-51 | -8.615850e-47 |
| Msa1422860 | Msa1439250 | 0.836319 | 1.003375e-56 | -8.615850e-47 |
| Msa1428230 | Msa1439250 | -0.814443 | 1.536583e-51 | -8.615850e-47 |
| Msa1430950 | Msa1439250 | 0.825104 | 5.623319e-54 | -8.615850e-47 |
| Msa1433040 | Msa1439250 | 0.818416 | 1.982594e-52 | -8.615850e-47 |
| Msa1433360 | Msa1439250 | 0.859925 | 2.950521e-63 | -8.615850e-47 |
| Msa1433570 | Msa1439250 | 0.800186 | 1.621636e-48 | -8.615850e-47 |
| Msa1437780 | Msa1439250 | 0.833267 | 5.882180e-56 | -8.615850e-47 |
| Msa1437810 | Msa1439250 | 0.800985 | 1.114558e-48 | -8.615850e-47 |
| Msa1439250 | Msa1439270 | 0.871434 | 6.853542e-67 | -8.615850e-47 |
| Msa1439250 | Msa1439930 | 0.800781 | 1.226706e-48 | -8.615850e-47 |
| Msa1439250 | Msa1445530 | 0.862766 | 4.016144e-64 | -8.615850e-47 |
| Msa1439250 | Msa1447100 | 0.800223 | 1.594198e-48 | -8.615850e-47 |
| Msa1439250 | Msa1464880 | 0.804736 | 1.872161e-49 | -8.615850e-47 |
| Msa0606600 | Msa1439250 | 0.803694 | 3.084838e-49 | -8.615850e-47 |
| Msa0610690 | Msa1439250 | 0.884552 | 1.739991e-71 | -8.615850e-47 |
| Msa0612350 | Msa1439250 | 0.808914 | 2.449881e-50 | -8.615850e-47 |
| Msa0644330 | Msa1439250 | 0.834485 | 2.916454e-56 | -8.615850e-47 |
| Msa0647300 | Msa1439250 | 0.804435 | 2.163527e-49 | -8.615850e-47 |
| Msa0648970 | Msa1439250 | 0.805344 | 1.396819e-49 | -8.615850e-47 |
| Msa0657710 | Msa1439250 | 0.876063 | 1.880038e-68 | -8.615850e-47 |
| Msa0657720 | Msa1439250 | 0.858523 | 7.772670e-63 | -8.615850e-47 |
| Msa0682110 | Msa1439250 | 0.825504 | 4.523001e-54 | -8.615850e-47 |
| Msa0682160 | Msa1439250 | 0.830664 | 2.585621e-55 | -8.615850e-47 |
| Msa0682910 | Msa1439250 | 0.800585 | 1.345404e-48 | -8.615850e-47 |
| Msa0686830 | Msa1439250 | 0.810974 | 8.825522e-51 | -8.615850e-47 |
| Msa0687580 | Msa1439250 | 0.824389 | 8.287653e-54 | -8.615850e-47 |
| Msa0702790 | Msa1439250 | 0.858545 | 7.652589e-63 | -8.615850e-47 |
| Msa0702800 | Msa1439250 | 0.885066 | 1.120077e-71 | -8.615850e-47 |
| Msa0703950 | Msa1439250 | 0.800982 | 1.116019e-48 | -8.615850e-47 |
| Msa0707330 | Msa1439250 | 0.820819 | 5.606641e-53 | -8.615850e-47 |
| Msa0712860 | Msa1439250 | 0.818113 | 2.321969e-52 | -8.615850e-47 |
| Msa0722890 | Msa1439250 | 0.824191 | 9.228468e-54 | -8.615850e-47 |
| Msa0723090 | Msa1439250 | 0.843335 | 1.492401e-58 | -8.615850e-47 |
| Msa0724860 | Msa1439250 | 0.813633 | 2.319297e-51 | -8.615850e-47 |
| Msa0742370 | Msa1439250 | -0.837223 | 5.898559e-57 | -8.615850e-47 |
| Msa0758990 | Msa1439250 | 0.810626 | 1.049699e-50 | -8.615850e-47 |
| Msa0769540 | Msa1439250 | 0.805689 | 1.182617e-49 | -8.615850e-47 |
| Msa0771790 | Msa1439250 | 0.800378 | 1.482572e-48 | -8.615850e-47 |
| Msa0773030 | Msa1439250 | 0.805063 | 1.599375e-49 | -8.615850e-47 |
| Msa0779450 | Msa1439250 | -0.828702 | 7.761367e-55 | -8.615850e-47 |
| Msa0800120 | Msa1439250 | 0.836274 | 1.029855e-56 | -8.615850e-47 |
| Msa0800150 | Msa1439250 | 0.828616 | 8.141749e-55 | -8.615850e-47 |
| Msa0800180 | Msa1439250 | 0.836086 | 1.150116e-56 | -8.615850e-47 |
| Msa0800480 | Msa1439250 | 0.824142 | 9.476104e-54 | -8.615850e-47 |
| Msa0810330 | Msa1439250 | 0.857410 | 1.663806e-62 | -8.615850e-47 |
| Msa0823480 | Msa1439250 | -0.820877 | 5.437729e-53 | -8.615850e-47 |
| Msa0828950 | Msa1439250 | 0.859000 | 5.597064e-63 | -8.615850e-47 |
| Msa0828960 | Msa1439250 | 0.884852 | 1.345972e-71 | -8.615850e-47 |
| Msa0838210 | Msa1439250 | 0.819601 | 1.065939e-52 | -8.615850e-47 |
| Msa0839680 | Msa1439250 | 0.800585 | 1.344832e-48 | -8.615850e-47 |
| Msa0129930 | Msa1439250 | -0.806489 | 8.024835e-50 | -8.615850e-47 |
| Msa0134780 | Msa1439250 | 0.800567 | 1.356775e-48 | -8.615850e-47 |
| Msa0139500 | Msa1439250 | 0.807175 | 5.745926e-50 | -8.615850e-47 |
| Msa0168750 | Msa1439250 | 0.811087 | 8.343069e-51 | -8.615850e-47 |
| Msa0173950 | Msa1439250 | -0.808979 | 2.373802e-50 | -8.615850e-47 |
| Msa0183310 | Msa1439250 | -0.812347 | 4.437071e-51 | -8.615850e-47 |
| Msa0183710 | Msa1439250 | 0.813906 | 2.019464e-51 | -8.615850e-47 |
| Msa0189680 | Msa1439250 | 0.810115 | 1.353202e-50 | -8.615850e-47 |
| Msa0189990 | Msa1439250 | 0.822785 | 1.967591e-53 | -8.615850e-47 |
| Msa0210610 | Msa1439250 | 0.825473 | 4.599970e-54 | -8.615850e-47 |
| Msa0217060 | Msa1439250 | 0.829447 | 5.121841e-55 | -8.615850e-47 |
| Msa0218500 | Msa1439250 | 0.822668 | 2.093929e-53 | -8.615850e-47 |
| Msa0218610 | Msa1439250 | 0.804637 | 1.962814e-49 | -8.615850e-47 |
| Msa0219280 | Msa1439250 | 0.819410 | 1.178355e-52 | -8.615850e-47 |
| Msa0231990 | Msa1439250 | 0.818421 | 1.977125e-52 | -8.615850e-47 |
| Msa0232060 | Msa1439250 | 0.820869 | 5.460920e-53 | -8.615850e-47 |
| Msa1238190 | Msa1439250 | 0.844645 | 6.648383e-59 | -8.615850e-47 |
| Msa1242160 | Msa1439250 | 0.813126 | 2.997223e-51 | -8.615850e-47 |
| Msa1249600 | Msa1439250 | 0.804698 | 1.906613e-49 | -8.615850e-47 |
| Msa1250610 | Msa1439250 | 0.812597 | 3.913623e-51 | -8.615850e-47 |
| Msa1250660 | Msa1439250 | 0.818962 | 1.490703e-52 | -8.615850e-47 |
| Msa1255210 | Msa1439250 | 0.829113 | 6.173376e-55 | -8.615850e-47 |
| Msa1255690 | Msa1439250 | 0.818340 | 2.063145e-52 | -8.615850e-47 |
| Msa1257610 | Msa1439250 | 0.808907 | 2.458512e-50 | -8.615850e-47 |
| Msa1263110 | Msa1439250 | 0.802982 | 4.331259e-49 | -8.615850e-47 |
| Msa1268360 | Msa1439250 | 0.840787 | 7.043938e-58 | -8.615850e-47 |
| Msa1268390 | Msa1439250 | 0.836126 | 1.123141e-56 | -8.615850e-47 |
| Msa1268420 | Msa1439250 | 0.833980 | 3.904270e-56 | -8.615850e-47 |
| Msa1281800 | Msa1439250 | 0.809803 | 1.579727e-50 | -8.615850e-47 |
| Msa1283930 | Msa1439250 | 0.848373 | 6.390201e-60 | -8.615850e-47 |
| Msa1284000 | Msa1439250 | 0.846047 | 2.774738e-59 | -8.615850e-47 |
| Msa1284020 | Msa1439250 | 0.886446 | 3.396259e-72 | -8.615850e-47 |
| Msa1290900 | Msa1439250 | 0.843579 | 1.284866e-58 | -8.615850e-47 |
| Msa1295650 | Msa1439250 | 0.832581 | 8.711056e-56 | -8.615850e-47 |
| Msa1306820 | Msa1439250 | 0.803584 | 3.251874e-49 | -8.615850e-47 |
| Msa1322960 | Msa1439250 | 0.857817 | 1.260225e-62 | -8.615850e-47 |
| Msa1322980 | Msa1439250 | 0.826737 | 2.302322e-54 | -8.615850e-47 |
| Msa1323010 | Msa1439250 | 0.842933 | 1.910408e-58 | -8.615850e-47 |
| Msa1323070 | Msa1439250 | 0.985939 | 3.746874e-165 | -8.615850e-47 |
| Msa1326180 | Msa1439250 | 0.833191 | 6.143753e-56 | -8.615850e-47 |
| Msa1326680 | Msa1439250 | 0.816420 | 5.580742e-52 | -8.615850e-47 |
| Msa1326710 | Msa1439250 | 0.833343 | 5.632251e-56 | -8.615850e-47 |
| Msa1331570 | Msa1439250 | -0.835551 | 1.570839e-56 | -8.615850e-47 |
| Msa1343280 | Msa1439250 | 0.806451 | 8.172901e-50 | -8.615850e-47 |
| Msa0365210 | Msa1439250 | 0.813873 | 2.053135e-51 | -8.615850e-47 |
| Msa0375790 | Msa1439250 | 0.808804 | 2.587175e-50 | -8.615850e-47 |
| Msa0376430 | Msa1439250 | 0.846478 | 2.117609e-59 | -8.615850e-47 |
| Msa0380110 | Msa1439250 | 0.814214 | 1.726293e-51 | -8.615850e-47 |
| Msa0384590 | Msa1439250 | 0.805368 | 1.380608e-49 | -8.615850e-47 |
| Msa0387930 | Msa1439250 | 0.830440 | 2.934009e-55 | -8.615850e-47 |
| Msa0389080 | Msa1439250 | -0.800175 | 1.630572e-48 | -8.615850e-47 |
| Msa0402070 | Msa1439250 | -0.850713 | 1.421676e-60 | -8.615850e-47 |
| Msa0429600 | Msa1439250 | 0.802486 | 5.483867e-49 | -8.615850e-47 |
| Msa0437440 | Msa1439250 | -0.834884 | 2.315430e-56 | -8.615850e-47 |
| Msa0437520 | Msa1439250 | 0.808573 | 2.897881e-50 | -8.615850e-47 |
| Msa0478430 | Msa1439250 | 0.808732 | 2.679645e-50 | -8.615850e-47 |
| Msa0480900 | Msa1439250 | -0.809710 | 1.654039e-50 | -8.615850e-47 |
| Msa1000480 | Msa1439250 | 0.828295 | 9.732930e-55 | -8.615850e-47 |
| Msa1013190 | Msa1439250 | 0.802355 | 5.835224e-49 | -8.615850e-47 |
| Msa1015360 | Msa1439250 | 0.830264 | 3.239212e-55 | -8.615850e-47 |
| Msa1019420 | Msa1439250 | 0.816992 | 4.153900e-52 | -8.615850e-47 |
| Msa1022420 | Msa1439250 | 0.833140 | 6.328673e-56 | -8.615850e-47 |
| Msa1029820 | Msa1439250 | 0.809635 | 1.716166e-50 | -8.615850e-47 |
| Msa1034950 | Msa1439250 | 0.813488 | 2.495589e-51 | -8.615850e-47 |
| Msa1039100 | Msa1439250 | 0.827366 | 1.628114e-54 | -8.615850e-47 |
| Msa1041060 | Msa1439250 | 0.836491 | 9.068896e-57 | -8.615850e-47 |
| Msa1044250 | Msa1439250 | 0.834200 | 3.439351e-56 | -8.615850e-47 |
| Msa1068940 | Msa1439250 | 0.810438 | 1.152684e-50 | -8.615850e-47 |
| Msa1070910 | Msa1439250 | 0.800303 | 1.535567e-48 | -8.615850e-47 |
| Msa1075010 | Msa1439250 | 0.812881 | 3.391304e-51 | -8.615850e-47 |
| Msa1082410 | Msa1439250 | 0.837099 | 6.347880e-57 | -8.615850e-47 |
| Msa1088320 | Msa1439250 | 0.833782 | 4.374903e-56 | -8.615850e-47 |
| Msa1094410 | Msa1439250 | 0.802642 | 5.091959e-49 | -8.615850e-47 |
| Msa1094810 | Msa1439250 | 0.824880 | 6.352152e-54 | -8.615850e-47 |
| Msa0247030 | Msa1439250 | 0.816876 | 4.410131e-52 | -8.615850e-47 |
| Msa0256920 | Msa1439250 | 0.832093 | 1.150632e-55 | -8.615850e-47 |
| Msa0258260 | Msa1439250 | 0.813244 | 2.823198e-51 | -8.615850e-47 |
| Msa0282960 | Msa1439250 | 0.807368 | 5.230000e-50 | -8.615850e-47 |
| Msa0285420 | Msa1439250 | 0.809751 | 1.620673e-50 | -8.615850e-47 |
| Msa0286360 | Msa1439250 | 0.806058 | 9.889816e-50 | -8.615850e-47 |
| Msa0288620 | Msa1439250 | 0.841814 | 3.782807e-58 | -8.615850e-47 |
| Msa0289960 | Msa1439250 | 0.821528 | 3.848285e-53 | -8.615850e-47 |
| Msa0293720 | Msa1439250 | 0.804200 | 2.421033e-49 | -8.615850e-47 |
| Msa0297340 | Msa1439250 | 0.806196 | 9.250724e-50 | -8.615850e-47 |
| Msa0298000 | Msa1439250 | 0.810755 | 9.845449e-51 | -8.615850e-47 |
| Msa0303900 | Msa1439250 | 0.813853 | 2.074296e-51 | -8.615850e-47 |
| Msa0307740 | Msa1439250 | 0.835252 | 1.870113e-56 | -8.615850e-47 |
| Msa0313900 | Msa1439250 | 0.818725 | 1.687441e-52 | -8.615850e-47 |
| Msa0318490 | Msa1439250 | 0.823565 | 1.293521e-53 | -8.615850e-47 |
| Msa0326710 | Msa1439250 | 0.805594 | 1.237752e-49 | -8.615850e-47 |
| Msa0330520 | Msa1439250 | 0.801860 | 7.376687e-49 | -8.615850e-47 |
| Msa0333770 | Msa1439250 | 0.818310 | 2.095301e-52 | -8.615850e-47 |
| Msa0334630 | Msa1439250 | 0.812882 | 3.390214e-51 | -8.615850e-47 |
| Msa0334660 | Msa1439250 | 0.804833 | 1.786527e-49 | -8.615850e-47 |
| Msa0343210 | Msa1439250 | 0.804035 | 2.620339e-49 | -8.615850e-47 |
| Msa0354970 | Msa1439250 | -0.801583 | 8.407821e-49 | -8.615850e-47 |
| Msa0355080 | Msa1439250 | -0.820001 | 8.636874e-53 | -8.615850e-47 |
| Msa0356270 | Msa1439250 | 0.810082 | 1.375385e-50 | -8.615850e-47 |
| Msa0358300 | Msa1439250 | 0.810478 | 1.129755e-50 | -8.615850e-47 |
| Msa1129120 | Msa1439250 | -0.814376 | 1.589669e-51 | -8.615850e-47 |
| Msa1131270 | Msa1439250 | 0.826306 | 2.915884e-54 | -8.615850e-47 |
| Msa1133750 | Msa1439250 | 0.814820 | 1.268050e-51 | -8.615850e-47 |
| Msa1147010 | Msa1439250 | 0.806363 | 8.530636e-50 | -8.615850e-47 |
| Msa1154320 | Msa1439250 | 0.833843 | 4.224538e-56 | -8.615850e-47 |
| Msa1156710 | Msa1439250 | 0.802261 | 6.100229e-49 | -8.615850e-47 |
| Msa1156720 | Msa1439250 | 0.806140 | 9.504691e-50 | -8.615850e-47 |
| Msa1165460 | Msa1439250 | 0.833518 | 5.094767e-56 | -8.615850e-47 |
| Msa1167310 | Msa1439250 | 0.812050 | 5.153048e-51 | -8.615850e-47 |
| Msa1184680 | Msa1439250 | 0.846885 | 1.639201e-59 | -8.615850e-47 |
| Msa1193910 | Msa1439250 | 0.850891 | 1.266009e-60 | -8.615850e-47 |
| Msa1202800 | Msa1439250 | 0.840573 | 8.015738e-58 | -8.615850e-47 |
| Msa1203440 | Msa1439250 | 0.842988 | 1.847519e-58 | -8.615850e-47 |
| Msa1203650 | Msa1439250 | 0.833987 | 3.889195e-56 | -8.615850e-47 |
| Msa1207920 | Msa1439250 | -0.822732 | 2.023326e-53 | -8.615850e-47 |
| Msa1221270 | Msa1439250 | 0.825075 | 5.713169e-54 | -8.615850e-47 |
| Msa0501080 | Msa1439250 | 0.834790 | 2.445029e-56 | -8.615850e-47 |
| Msa0502360 | Msa1439250 | 0.807443 | 5.043112e-50 | -8.615850e-47 |
| Msa0516250 | Msa1439250 | 0.837636 | 4.624786e-57 | -8.615850e-47 |
| Msa0522540 | Msa1439250 | 0.801631 | 8.218173e-49 | -8.615850e-47 |
| Msa0565700 | Msa1439250 | 0.817242 | 3.650969e-52 | -8.615850e-47 |
| Msa0566280 | Msa1439250 | 0.847178 | 1.363167e-59 | -8.615850e-47 |
| Msa0567330 | Msa1439250 | 0.848927 | 4.485280e-60 | -8.615850e-47 |
| Msa0567570 | Msa1439250 | 0.805080 | 1.586102e-49 | -8.615850e-47 |
| Msa0576320 | Msa1439250 | 0.829798 | 4.208169e-55 | -8.615850e-47 |
| Msa0579080 | Msa1439250 | 0.832729 | 8.004490e-56 | -8.615850e-47 |
| Msa0579160 | Msa1439250 | 0.855189 | 7.454315e-62 | -8.615850e-47 |
| Msa0579220 | Msa1439250 | 0.852837 | 3.552556e-61 | -8.615850e-47 |
| Msa0581350 | Msa1439250 | 0.815475 | 9.069090e-52 | -8.615850e-47 |
| Msa0590620 | Msa1439250 | -0.836778 | 7.663675e-57 | -8.615850e-47 |
| Msa0850640 | Msa1439250 | 0.835038 | 2.116869e-56 | -8.615850e-47 |
| Msa0862480 | Msa1439250 | -0.843247 | 1.575692e-58 | -8.615850e-47 |
| Msa0900330 | Msa1439250 | 0.820767 | 5.763070e-53 | -8.615850e-47 |
| Msa0907880 | Msa1439250 | 0.838973 | 2.091366e-57 | -8.615850e-47 |
| Msa0909260 | Msa1439250 | 0.850127 | 2.075942e-60 | -8.615850e-47 |
| Msa0928450 | Msa1439250 | 0.821679 | 3.551248e-53 | -8.615850e-47 |
| Msa0931680 | Msa1439250 | 0.802771 | 4.788414e-49 | -8.615850e-47 |
| Msa0940910 | Msa1439250 | 0.864007 | 1.656489e-64 | -8.615850e-47 |
| Msa0946330 | Msa1439250 | 0.845842 | 3.155060e-59 | -8.615850e-47 |
| Msa0964020 | Msa1439250 | 0.803539 | 3.321682e-49 | -8.615850e-47 |
| Msa0967780 | Msa1439250 | 0.818588 | 1.812413e-52 | -8.615850e-47 |
| Msa0969380 | Msa1439250 | 0.808263 | 3.374391e-50 | -8.615850e-47 |
| Msa0969720 | Msa1439250 | 0.812445 | 4.224201e-51 | -8.615850e-47 |
| Msa0972680 | Msa1439250 | 0.814257 | 1.689024e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439250 | MtrunA17_Chr8g0355811 | 96.154 | 156 | 6 | 0 | 1 | 156 | 1 | 156 | 5.34e-111 | 311 |
| Msa1439250 | MtrunA17_Chr8g0355821 | 88.312 | 154 | 18 | 0 | 1 | 154 | 1 | 154 | 1.12e-101 | 288 |
| Msa1439250 | MtrunA17_Chr8g0355801 | 87.179 | 156 | 20 | 0 | 1 | 156 | 1 | 156 | 5.56e-100 | 284 |
| Msa1439250 | MtrunA17_Chr8g0355791 | 83.333 | 156 | 26 | 0 | 1 | 156 | 1 | 156 | 5.53e-96 | 274 |
| Msa1439250 | MtrunA17_Chr8g0355771 | 82.692 | 156 | 27 | 0 | 1 | 156 | 1 | 156 | 1.05e-94 | 270 |
| Msa1439250 | MtrunA17_Chr8g0355741 | 78.981 | 157 | 32 | 1 | 1 | 156 | 1 | 157 | 1.17e-89 | 258 |
| Msa1439250 | MtrunA17_Chr8g0355721 | 75.159 | 157 | 37 | 2 | 1 | 156 | 1 | 156 | 7.47e-86 | 248 |
| Msa1439250 | MtrunA17_Chr8g0355661 | 73.248 | 157 | 40 | 2 | 1 | 156 | 1 | 156 | 2.75e-83 | 241 |
| Msa1439250 | MtrunA17_Chr8g0355781 | 71.711 | 152 | 42 | 1 | 1 | 151 | 1 | 152 | 7.44e-81 | 235 |
| Msa1439250 | MtrunA17_Chr8g0355761 | 71.053 | 152 | 43 | 1 | 1 | 151 | 1 | 152 | 5.59e-80 | 233 |
| Msa1439250 | MtrunA17_Chr8g0355641 | 67.949 | 156 | 49 | 1 | 1 | 155 | 1 | 156 | 5.19e-79 | 231 |
| Msa1439250 | MtrunA17_Chr1g0160371 | 43.137 | 153 | 83 | 3 | 1 | 150 | 1 | 152 | 1.21e-39 | 131 |
| Msa1439250 | MtrunA17_Chr1g0160381 | 38.562 | 153 | 90 | 3 | 1 | 150 | 5 | 156 | 9.91e-38 | 126 |
| Msa1439250 | MtrunA17_Chr1g0160391 | 38.462 | 156 | 87 | 5 | 1 | 148 | 1 | 155 | 4.93e-29 | 104 |
| Msa1439250 | MtrunA17_Chr8g0339261 | 34.000 | 150 | 95 | 4 | 6 | 153 | 8 | 155 | 1.82e-26 | 97.8 |
| Msa1439250 | MtrunA17_Chr1g0160801 | 38.514 | 148 | 81 | 6 | 7 | 151 | 7 | 147 | 1.47e-22 | 87.4 |
| Msa1439250 | MtrunA17_Chr1g0160351 | 40.860 | 93 | 52 | 2 | 61 | 150 | 1 | 93 | 9.66e-21 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439250 | AT5G28010.1 | 35.948 | 153 | 94 | 4 | 3 | 152 | 15 | 166 | 1.31e-25 | 96.3 |
| Msa1439250 | AT5G28010.2 | 35.948 | 153 | 94 | 4 | 3 | 152 | 15 | 166 | 1.31e-25 | 96.3 |
| Msa1439250 | AT1G70840.1 | 35.294 | 153 | 95 | 4 | 3 | 152 | 20 | 171 | 1.01e-24 | 94.0 |
| Msa1439250 | AT1G70830.5 | 36.601 | 153 | 93 | 4 | 3 | 152 | 22 | 173 | 2.70e-24 | 92.8 |
| Msa1439250 | AT1G70830.3 | 36.364 | 154 | 94 | 4 | 3 | 153 | 22 | 174 | 3.95e-24 | 93.2 |
| Msa1439250 | AT1G70890.1 | 35.948 | 153 | 94 | 4 | 3 | 152 | 7 | 158 | 6.27e-24 | 91.7 |
| Msa1439250 | AT1G70830.2 | 36.364 | 154 | 94 | 4 | 3 | 153 | 22 | 174 | 1.76e-23 | 92.8 |
| Msa1439250 | AT1G70830.1 | 36.364 | 154 | 94 | 4 | 3 | 153 | 22 | 174 | 4.49e-23 | 93.2 |
| Msa1439250 | AT1G70830.1 | 35.294 | 153 | 95 | 4 | 3 | 152 | 184 | 335 | 1.57e-21 | 89.0 |
| Msa1439250 | AT5G28000.1 | 32.680 | 153 | 99 | 4 | 3 | 152 | 13 | 164 | 2.91e-22 | 87.4 |
| Msa1439250 | AT1G70830.4 | 35.294 | 153 | 95 | 4 | 3 | 152 | 137 | 288 | 5.46e-22 | 89.7 |
| Msa1439250 | AT1G70830.4 | 32.990 | 97 | 63 | 2 | 59 | 153 | 31 | 127 | 3.65e-11 | 60.1 |
| Msa1439250 | AT1G70850.2 | 34.667 | 150 | 94 | 4 | 3 | 149 | 9 | 157 | 1.07e-21 | 87.8 |
| Msa1439250 | AT1G70850.3 | 34.667 | 150 | 94 | 4 | 3 | 149 | 9 | 157 | 2.41e-21 | 88.2 |
| Msa1439250 | AT1G70850.3 | 35.664 | 143 | 88 | 4 | 13 | 152 | 175 | 316 | 7.56e-21 | 87.0 |
| Msa1439250 | AT1G70850.1 | 34.667 | 150 | 94 | 4 | 3 | 149 | 9 | 157 | 2.41e-21 | 88.2 |
| Msa1439250 | AT1G70850.1 | 35.664 | 143 | 88 | 4 | 13 | 152 | 175 | 316 | 7.56e-21 | 87.0 |
| Msa1439250 | AT4G23670.1 | 32.680 | 153 | 99 | 4 | 1 | 151 | 1 | 151 | 2.05e-20 | 82.4 |
| Msa1439250 | AT1G14930.1 | 29.299 | 157 | 107 | 4 | 1 | 155 | 1 | 155 | 2.71e-19 | 79.7 |
| Msa1439250 | AT1G70870.1 | 34.839 | 155 | 79 | 5 | 1 | 150 | 1 | 138 | 7.20e-19 | 78.2 |
| Msa1439250 | AT2G01520.1 | 29.412 | 153 | 104 | 4 | 1 | 151 | 1 | 151 | 1.10e-18 | 77.8 |
| Msa1439250 | AT2G01530.1 | 30.719 | 153 | 102 | 4 | 1 | 151 | 1 | 151 | 9.75e-18 | 75.5 |
| Msa1439250 | AT1G70880.1 | 29.412 | 153 | 104 | 4 | 3 | 152 | 8 | 159 | 3.98e-17 | 73.9 |
| Msa1439250 | AT1G14940.1 | 28.662 | 157 | 108 | 4 | 1 | 155 | 1 | 155 | 6.07e-17 | 73.6 |
| Msa1439250 | AT1G35260.1 | 30.612 | 147 | 91 | 5 | 9 | 149 | 8 | 149 | 2.31e-16 | 72.0 |
| Msa1439250 | AT4G14060.1 | 28.758 | 153 | 105 | 4 | 1 | 151 | 1 | 151 | 2.36e-16 | 72.0 |
| Msa1439250 | AT4G23680.1 | 28.947 | 152 | 104 | 4 | 1 | 150 | 1 | 150 | 3.02e-16 | 71.6 |
| Msa1439250 | AT1G23130.1 | 28.188 | 149 | 104 | 3 | 3 | 149 | 10 | 157 | 4.83e-16 | 71.2 |
| Msa1439250 | AT1G24020.1 | 30.968 | 155 | 98 | 4 | 1 | 150 | 1 | 151 | 5.04e-16 | 71.2 |
| Msa1439250 | AT1G24020.2 | 30.968 | 155 | 98 | 4 | 1 | 150 | 1 | 151 | 5.04e-16 | 71.2 |
| Msa1439250 | AT1G14950.1 | 28.025 | 157 | 109 | 4 | 1 | 155 | 1 | 155 | 8.12e-16 | 70.5 |
| Msa1439250 | AT1G23120.1 | 28.667 | 150 | 99 | 5 | 3 | 149 | 1 | 145 | 1.76e-15 | 69.3 |
| Msa1439250 | AT1G23120.2 | 27.660 | 141 | 96 | 4 | 10 | 149 | 60 | 195 | 4.62e-15 | 69.7 |
| Msa1439250 | AT1G30990.1 | 27.815 | 151 | 104 | 5 | 1 | 149 | 1 | 148 | 1.56e-13 | 64.3 |
| Msa1439250 | AT1G14960.1 | 26.452 | 155 | 110 | 4 | 1 | 153 | 1 | 153 | 8.70e-13 | 62.4 |
| Msa1439250 | AT1G35310.1 | 27.338 | 139 | 97 | 4 | 13 | 149 | 12 | 148 | 1.61e-12 | 62.0 |
| Msa1439250 | AT3G26460.1 | 26.797 | 153 | 109 | 3 | 1 | 151 | 1 | 152 | 2.27e-12 | 61.6 |
| Msa1439250 | AT3G26450.1 | 24.675 | 154 | 111 | 5 | 1 | 151 | 1 | 152 | 4.26e-11 | 58.2 |
Find 44 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATAAAGATATTTGAATTA+TGG | 0.240516 | tig0028731:+4927 | Msa1439250:three_prime_UTR |
| ATAAGGGATGGTTTATGATA+TGG | 0.251417 | tig0028731:-3405 | Msa1439250:intergenic |
| AAAGATGAAAGAAACAAATA+AGG | 0.269937 | tig0028731:-3422 | Msa1439250:intergenic |
| AAAATCACATACAAGCTATT+TGG | 0.273919 | tig0028731:+4698 | Msa1439250:CDS |
| TTATGTGTGATGCAAATAAA+TGG | 0.319133 | tig0028731:+5117 | Msa1439250:three_prime_UTR |
| AATTATGGTTCAATGGGGTT+TGG | 0.343641 | tig0028731:+4942 | Msa1439250:three_prime_UTR |
| TGGAGATATTGAAAACTATA+AGG | 0.391039 | tig0028731:+4721 | Msa1439250:CDS |
| TATTTGAATTATGGTTCAAT+GGG | 0.403324 | tig0028731:+4936 | Msa1439250:three_prime_UTR |
| CTAGTGTGATGTTTGTCTTT+TGG | 0.406460 | tig0028731:+5004 | Msa1439250:three_prime_UTR |
| ATGGAAATTCTGCTGTTAGA+TGG | 0.411619 | tig0028731:+4780 | Msa1439250:CDS |
| TAAGGGATGGTTTATGATAT+GGG | 0.413804 | tig0028731:-3404 | Msa1439250:intergenic |
| GGTAAACTTATTACTGAACT+TGG | 0.415223 | tig0028731:+3488 | Msa1439250:CDS |
| ATATTTGAATTATGGTTCAA+TGG | 0.435694 | tig0028731:+4935 | Msa1439250:three_prime_UTR |
| TGATGCAAATAAATGGATAT+TGG | 0.446070 | tig0028731:+5124 | Msa1439250:three_prime_UTR |
| AGGTAGTCCATCCAGCCATT+TGG | 0.456227 | tig0028731:-4842 | Msa1439250:intergenic |
| AAACACTGGACTTATGTCAT+AGG | 0.470664 | tig0028731:+3641 | Msa1439250:CDS |
| AAGATGAAAGAAACAAATAA+GGG | 0.486411 | tig0028731:-3421 | Msa1439250:intergenic |
| AGCTTCATGAGGGTGAAGAT+TGG | 0.493681 | tig0028731:+3600 | Msa1439250:CDS |
| TCATCTTGTCAAAGGGGAAA+AGG | 0.504175 | tig0028731:+4892 | Msa1439250:CDS |
| AGATTGGCATCATACTGATT+CGG | 0.504369 | tig0028731:+3616 | Msa1439250:CDS |
| AAGAGCACTAGAGATATTGA+TGG | 0.505384 | tig0028731:+4869 | Msa1439250:CDS |
| TTGATGGTCATCTTGTCAAA+GGG | 0.506740 | tig0028731:+4885 | Msa1439250:CDS |
| ATCTTCACCCTCATGAAGCT+TGG | 0.519812 | tig0028731:-3597 | Msa1439250:intergenic |
| ATCACATACAAGCTATTTGG+TGG | 0.530005 | tig0028731:+4701 | Msa1439250:CDS |
| GTAAACTTATTACTGAACTT+GGG | 0.542207 | tig0028731:+3489 | Msa1439250:CDS |
| ATTGATGGTCATCTTGTCAA+AGG | 0.543582 | tig0028731:+4884 | Msa1439250:CDS |
| AGTTTGTAGAACTTGTCAGC+TGG | 0.569465 | tig0028731:-3521 | Msa1439250:intergenic |
| TATCTCTAGTGCTCTTGCTA+AGG | 0.569595 | tig0028731:-4862 | Msa1439250:intergenic |
| GAAGTGCTTAACAAGGCTGA+TGG | 0.573383 | tig0028731:+4761 | Msa1439250:CDS |
| ATGTTGATACTCCAAATGGC+TGG | 0.578150 | tig0028731:+4831 | Msa1439250:CDS |
| TGATACTCCAAATGGCTGGA+TGG | 0.587093 | tig0028731:+4835 | Msa1439250:CDS |
| GAGGATGTTGATACTCCAAA+TGG | 0.593330 | tig0028731:+4827 | Msa1439250:CDS |
| TGAAAGAAACAAATAAGGGA+TGG | 0.593617 | tig0028731:-3417 | Msa1439250:intergenic |
| AAGGGATGGTTTATGATATG+GGG | 0.600134 | tig0028731:-3403 | Msa1439250:intergenic |
| TTTGTATCGAATATATGTGT+CGG | 0.605896 | tig0028731:+5068 | Msa1439250:three_prime_UTR |
| ATACTGATTCGGTTAAACAC+TGG | 0.606046 | tig0028731:+3627 | Msa1439250:CDS |
| TCATCATACCAAGCTTCATG+AGG | 0.610699 | tig0028731:+3589 | Msa1439250:CDS |
| ATTTGAATTATGGTTCAATG+GGG | 0.632915 | tig0028731:+4937 | Msa1439250:three_prime_UTR |
| CATCATACCAAGCTTCATGA+GGG | 0.642119 | tig0028731:+3590 | Msa1439250:CDS |
| CATCTTAGAAGTGCTTAACA+AGG | 0.644958 | tig0028731:+4754 | Msa1439250:CDS |
| TGATGGTCATCTTGTCAAAG+GGG | 0.652198 | tig0028731:+4886 | Msa1439250:CDS |
| TGACATAACAACAGATGGCG+AGG | 0.663434 | tig0028731:+4628 | Msa1439250:intron |
| TGATTATGAGAAGAACAATG+AGG | 0.694185 | tig0028731:+4808 | Msa1439250:CDS |
| ACATATATTCGATACAAACG+AGG | 0.746442 | tig0028731:-5063 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTACTAAAAACTTTA+AGG | - | tig0028731:4303-4322 | Msa1439250:intergenic | 10.0% |
| !! | AAATTTACTATAAAATAGTA+AGG | + | tig0028731:4398-4417 | Msa1439250:intron | 10.0% |
| !! | TTATCTTATTATAATATTTC+TGG | + | tig0028731:4536-4555 | Msa1439250:intron | 10.0% |
| !!! | TTATTTTACTAAAAACTTTA+AGG | - | tig0028731:4303-4322 | Msa1439250:intergenic | 10.0% |
| !! | AAATTTACTATAAAATAGTA+AGG | + | tig0028731:4398-4417 | Msa1439250:intron | 10.0% |
| !! | TTATCTTATTATAATATTTC+TGG | + | tig0028731:4536-4555 | Msa1439250:intron | 10.0% |
| !! | TATAGTAATAAAAAGAAGAT+TGG | + | tig0028731:3751-3770 | Msa1439250:intron | 15.0% |
| !! | AAATTCTAAATTAAGTCAAT+AGG | - | tig0028731:3865-3884 | Msa1439250:intergenic | 15.0% |
| !! | AGATAATCTATATAAAAAGT+AGG | + | tig0028731:4236-4255 | Msa1439250:intron | 15.0% |
| !! | GATAATCTATATAAAAAGTA+GGG | + | tig0028731:4237-4256 | Msa1439250:intron | 15.0% |
| !!! | AAAGCTTATTTTATTCTTTT+TGG | + | tig0028731:4592-4611 | Msa1439250:intron | 15.0% |
| !! | TCATAAAGATATTTGAATTA+TGG | + | tig0028731:4927-4946 | Msa1439250:three_prime_UTR | 15.0% |
| !! | TATAGTAATAAAAAGAAGAT+TGG | + | tig0028731:3751-3770 | Msa1439250:intron | 15.0% |
| !! | AAATTCTAAATTAAGTCAAT+AGG | - | tig0028731:3865-3884 | Msa1439250:intergenic | 15.0% |
| !! | AGATAATCTATATAAAAAGT+AGG | + | tig0028731:4236-4255 | Msa1439250:intron | 15.0% |
| !! | GATAATCTATATAAAAAGTA+GGG | + | tig0028731:4237-4256 | Msa1439250:intron | 15.0% |
| !!! | AAAGCTTATTTTATTCTTTT+TGG | + | tig0028731:4592-4611 | Msa1439250:intron | 15.0% |
| !! | TCATAAAGATATTTGAATTA+TGG | + | tig0028731:4927-4946 | Msa1439250:three_prime_UTR | 15.0% |
| !! | AAGATGAAAGAAACAAATAA+GGG | - | tig0028731:3424-3443 | Msa1323070:intergenic | 20.0% |
| !! | AAAGATGAAAGAAACAAATA+AGG | - | tig0028731:3425-3444 | Msa1323070:intergenic | 20.0% |
| !! | ATTTAGTATCTATCCAAAAA+TGG | + | tig0028731:3457-3476 | Msa1439250:exon | 20.0% |
| !! | CATCATATAAGATCTTTAAA+AGG | + | tig0028731:4439-4458 | Msa1439250:intron | 20.0% |
| !!! | GAATAAAATAAGCTTTTCAA+AGG | - | tig0028731:4588-4607 | Msa1439250:intergenic | 20.0% |
| !! | ATATTTGAATTATGGTTCAA+TGG | + | tig0028731:4935-4954 | Msa1439250:three_prime_UTR | 20.0% |
| !! | TATTTGAATTATGGTTCAAT+GGG | + | tig0028731:4936-4955 | Msa1439250:three_prime_UTR | 20.0% |
| !!! | AGTTTAGTTTAACAAATCTT+AGG | + | tig0028731:5193-5212 | Msa1439250:three_prime_UTR | 20.0% |
| !!! | GTTTAGTTTAACAAATCTTA+GGG | + | tig0028731:5194-5213 | Msa1439250:three_prime_UTR | 20.0% |
| !! | AAGATGAAAGAAACAAATAA+GGG | - | tig0028731:3424-3443 | Msa1439250:intergenic | 20.0% |
| !! | AAAGATGAAAGAAACAAATA+AGG | - | tig0028731:3425-3444 | Msa1439250:intergenic | 20.0% |
| !! | ATTTAGTATCTATCCAAAAA+TGG | + | tig0028731:3457-3476 | Msa1439250:exon | 20.0% |
| !! | CATCATATAAGATCTTTAAA+AGG | + | tig0028731:4439-4458 | Msa1439250:intron | 20.0% |
| !!! | GAATAAAATAAGCTTTTCAA+AGG | - | tig0028731:4588-4607 | Msa1439250:intergenic | 20.0% |
| !! | ATATTTGAATTATGGTTCAA+TGG | + | tig0028731:4935-4954 | Msa1439250:three_prime_UTR | 20.0% |
| !! | TATTTGAATTATGGTTCAAT+GGG | + | tig0028731:4936-4955 | Msa1439250:three_prime_UTR | 20.0% |
| ! | GTAAACTTATTACTGAACTT+GGG | + | tig0028731:3489-3508 | Msa1439250:CDS | 25.0% |
| ! | TATCAAACAAGATGATGATT+TGG | - | tig0028731:3693-3712 | Msa1439250:intergenic | 25.0% |
| ! | AGTAATAAAAAGAAGATTGG+TGG | + | tig0028731:3754-3773 | Msa1439250:intron | 25.0% |
| ! | GTAATAAAAAGAAGATTGGT+GGG | + | tig0028731:3755-3774 | Msa1439250:intron | 25.0% |
| ! | TCTTCGTTATAGAATTCATT+TGG | - | tig0028731:3791-3810 | Msa1439250:intergenic | 25.0% |
| ! | AAAAAATTATACTCGTACCA+TGG | - | tig0028731:4177-4196 | Msa1439250:intergenic | 25.0% |
| ! | TTATCTCTAGACAAAAAATC+TGG | - | tig0028731:4222-4241 | Msa1439250:intergenic | 25.0% |
| !!! | ATCTTTAAAAGGTGTTTTAG+AGG | + | tig0028731:4450-4469 | Msa1439250:intron | 25.0% |
| ! | AAAATCACATACAAGCTATT+TGG | + | tig0028731:4698-4717 | Msa1439250:CDS | 25.0% |
| ! | TGGAGATATTGAAAACTATA+AGG | + | tig0028731:4721-4740 | Msa1439250:CDS | 25.0% |
| ! | ATTTGAATTATGGTTCAATG+GGG | + | tig0028731:4937-4956 | Msa1439250:three_prime_UTR | 25.0% |
| ! | TTTGTATCGAATATATGTGT+CGG | + | tig0028731:5068-5087 | Msa1439250:three_prime_UTR | 25.0% |
| ! | TTATGTGTGATGCAAATAAA+TGG | + | tig0028731:5117-5136 | Msa1439250:three_prime_UTR | 25.0% |
| ! | TGATGCAAATAAATGGATAT+TGG | + | tig0028731:5124-5143 | Msa1439250:three_prime_UTR | 25.0% |
| ! | GTAAACTTATTACTGAACTT+GGG | + | tig0028731:3489-3508 | Msa1439250:CDS | 25.0% |
| ! | TATCAAACAAGATGATGATT+TGG | - | tig0028731:3693-3712 | Msa1439250:intergenic | 25.0% |
| ! | AGTAATAAAAAGAAGATTGG+TGG | + | tig0028731:3754-3773 | Msa1439250:intron | 25.0% |
| ! | GTAATAAAAAGAAGATTGGT+GGG | + | tig0028731:3755-3774 | Msa1439250:intron | 25.0% |
| ! | TCTTCGTTATAGAATTCATT+TGG | - | tig0028731:3791-3810 | Msa1439250:intergenic | 25.0% |
| ! | AAAAAATTATACTCGTACCA+TGG | - | tig0028731:4177-4196 | Msa1439250:intergenic | 25.0% |
| ! | TTATCTCTAGACAAAAAATC+TGG | - | tig0028731:4222-4241 | Msa1439250:intergenic | 25.0% |
| !!! | ATCTTTAAAAGGTGTTTTAG+AGG | + | tig0028731:4450-4469 | Msa1439250:intron | 25.0% |
| ! | AAAATCACATACAAGCTATT+TGG | + | tig0028731:4698-4717 | Msa1439250:CDS | 25.0% |
| ! | TGGAGATATTGAAAACTATA+AGG | + | tig0028731:4721-4740 | Msa1439250:CDS | 25.0% |
| ! | ATTTGAATTATGGTTCAATG+GGG | + | tig0028731:4937-4956 | Msa1439250:three_prime_UTR | 25.0% |
| ! | TTTGTATCGAATATATGTGT+CGG | + | tig0028731:5068-5087 | Msa1439250:three_prime_UTR | 25.0% |
| ! | TTATGTGTGATGCAAATAAA+TGG | + | tig0028731:5117-5136 | Msa1439250:three_prime_UTR | 25.0% |
| ! | TGATGCAAATAAATGGATAT+TGG | + | tig0028731:5124-5143 | Msa1439250:three_prime_UTR | 25.0% |
| TAAGGGATGGTTTATGATAT+GGG | - | tig0028731:3407-3426 | Msa1323070:intergenic | 30.0% | |
| ATAAGGGATGGTTTATGATA+TGG | - | tig0028731:3408-3427 | Msa1323070:intergenic | 30.0% | |
| TGAAAGAAACAAATAAGGGA+TGG | - | tig0028731:3420-3439 | Msa1323070:intergenic | 30.0% | |
| GGTAAACTTATTACTGAACT+TGG | + | tig0028731:3488-3507 | Msa1439250:CDS | 30.0% | |
| TGATTATGAGAAGAACAATG+AGG | + | tig0028731:4808-4827 | Msa1439250:CDS | 30.0% | |
| ACATATATTCGATACAAACG+AGG | - | tig0028731:5066-5085 | Msa1439250:intergenic | 30.0% | |
| TAAGGGATGGTTTATGATAT+GGG | - | tig0028731:3407-3426 | Msa1439250:intergenic | 30.0% | |
| ATAAGGGATGGTTTATGATA+TGG | - | tig0028731:3408-3427 | Msa1439250:intergenic | 30.0% | |
| TGAAAGAAACAAATAAGGGA+TGG | - | tig0028731:3420-3439 | Msa1439250:intergenic | 30.0% | |
| GGTAAACTTATTACTGAACT+TGG | + | tig0028731:3488-3507 | Msa1439250:CDS | 30.0% | |
| TGATTATGAGAAGAACAATG+AGG | + | tig0028731:4808-4827 | Msa1439250:CDS | 30.0% | |
| ACATATATTCGATACAAACG+AGG | - | tig0028731:5066-5085 | Msa1439250:intergenic | 30.0% | |
| AAGGGATGGTTTATGATATG+GGG | - | tig0028731:3406-3425 | Msa1323070:intergenic | 35.0% | |
| ! | AGATTGGCATCATACTGATT+CGG | + | tig0028731:3616-3635 | Msa1439250:CDS | 35.0% |
| !! | ATACTGATTCGGTTAAACAC+TGG | + | tig0028731:3627-3646 | Msa1439250:CDS | 35.0% |
| AAACACTGGACTTATGTCAT+AGG | + | tig0028731:3641-3660 | Msa1439250:CDS | 35.0% | |
| TATCGAAATCATTGTACACG+AGG | + | tig0028731:3969-3988 | Msa1439250:intron | 35.0% | |
| AAAGCAACAAATGACCCTAA+AGG | + | tig0028731:4119-4138 | Msa1439250:intron | 35.0% | |
| AGTAGCATCTCTTTCCTTTA+GGG | - | tig0028731:4136-4155 | Msa1439250:intergenic | 35.0% | |
| GCTTGTATGATATGATCCTT+CGG | + | tig0028731:4259-4278 | Msa1439250:intron | 35.0% | |
| ATCACATACAAGCTATTTGG+TGG | + | tig0028731:4701-4720 | Msa1439250:CDS | 35.0% | |
| !! | CATCTTAGAAGTGCTTAACA+AGG | + | tig0028731:4754-4773 | Msa1439250:CDS | 35.0% |
| ATGGAAATTCTGCTGTTAGA+TGG | + | tig0028731:4780-4799 | Msa1439250:CDS | 35.0% | |
| !! | AAGAGCACTAGAGATATTGA+TGG | + | tig0028731:4869-4888 | Msa1439250:CDS | 35.0% |
| ! | ATTGATGGTCATCTTGTCAA+AGG | + | tig0028731:4884-4903 | Msa1439250:CDS | 35.0% |
| ! | TTGATGGTCATCTTGTCAAA+GGG | + | tig0028731:4885-4904 | Msa1439250:CDS | 35.0% |
| AATTATGGTTCAATGGGGTT+TGG | + | tig0028731:4942-4961 | Msa1439250:three_prime_UTR | 35.0% | |
| ! | CTAGTGTGATGTTTGTCTTT+TGG | + | tig0028731:5004-5023 | Msa1439250:three_prime_UTR | 35.0% |
| AAGGGATGGTTTATGATATG+GGG | - | tig0028731:3406-3425 | Msa1439250:intergenic | 35.0% | |
| ! | AGATTGGCATCATACTGATT+CGG | + | tig0028731:3616-3635 | Msa1439250:CDS | 35.0% |
| !! | ATACTGATTCGGTTAAACAC+TGG | + | tig0028731:3627-3646 | Msa1439250:CDS | 35.0% |
| AAACACTGGACTTATGTCAT+AGG | + | tig0028731:3641-3660 | Msa1439250:CDS | 35.0% | |
| TATCGAAATCATTGTACACG+AGG | + | tig0028731:3969-3988 | Msa1439250:intron | 35.0% | |
| AAAGCAACAAATGACCCTAA+AGG | + | tig0028731:4119-4138 | Msa1439250:intron | 35.0% | |
| AGTAGCATCTCTTTCCTTTA+GGG | - | tig0028731:4136-4155 | Msa1439250:intergenic | 35.0% | |
| GCTTGTATGATATGATCCTT+CGG | + | tig0028731:4259-4278 | Msa1439250:intron | 35.0% | |
| ATCACATACAAGCTATTTGG+TGG | + | tig0028731:4701-4720 | Msa1439250:CDS | 35.0% | |
| !! | CATCTTAGAAGTGCTTAACA+AGG | + | tig0028731:4754-4773 | Msa1439250:CDS | 35.0% |
| ATGGAAATTCTGCTGTTAGA+TGG | + | tig0028731:4780-4799 | Msa1439250:CDS | 35.0% | |
| !! | AAGAGCACTAGAGATATTGA+TGG | + | tig0028731:4869-4888 | Msa1439250:CDS | 35.0% |
| ! | ATTGATGGTCATCTTGTCAA+AGG | + | tig0028731:4884-4903 | Msa1439250:CDS | 35.0% |
| ! | TTGATGGTCATCTTGTCAAA+GGG | + | tig0028731:4885-4904 | Msa1439250:CDS | 35.0% |
| AATTATGGTTCAATGGGGTT+TGG | + | tig0028731:4942-4961 | Msa1439250:three_prime_UTR | 35.0% | |
| ! | CTAGTGTGATGTTTGTCTTT+TGG | + | tig0028731:5004-5023 | Msa1439250:three_prime_UTR | 35.0% |
| TATCCAAAAATGGTGCTTGC+TGG | + | tig0028731:3467-3486 | Msa1439250:exon | 40.0% | |
| ! | TTACCAGCAAGCACCATTTT+TGG | - | tig0028731:3473-3492 | Msa1439250:intergenic | 40.0% |
| AGTTTGTAGAACTTGTCAGC+TGG | - | tig0028731:3524-3543 | Msa1439250:intergenic | 40.0% | |
| TCATCATACCAAGCTTCATG+AGG | + | tig0028731:3589-3608 | Msa1439250:CDS | 40.0% | |
| CATCATACCAAGCTTCATGA+GGG | + | tig0028731:3590-3609 | Msa1439250:CDS | 40.0% | |
| TGAGACTGATCTAACAACGA+AGG | + | tig0028731:3828-3847 | Msa1439250:intron | 40.0% | |
| GAGTAGCATCTCTTTCCTTT+AGG | - | tig0028731:4137-4156 | Msa1439250:intergenic | 40.0% | |
| AACCACCTTTGTATTCACCA+TGG | + | tig0028731:4157-4176 | Msa1439250:intron | 40.0% | |
| TACCATGGTGAATACAAAGG+TGG | - | tig0028731:4162-4181 | Msa1439250:intergenic | 40.0% | |
| TCGTACCATGGTGAATACAA+AGG | - | tig0028731:4165-4184 | Msa1439250:intergenic | 40.0% | |
| ! | CGTCTTTAGACATTTTCCGA+AGG | - | tig0028731:4278-4297 | Msa1439250:intergenic | 40.0% |
| GAGGATGTTGATACTCCAAA+TGG | + | tig0028731:4827-4846 | Msa1439250:CDS | 40.0% | |
| ATGTTGATACTCCAAATGGC+TGG | + | tig0028731:4831-4850 | Msa1439250:CDS | 40.0% | |
| TATCTCTAGTGCTCTTGCTA+AGG | - | tig0028731:4865-4884 | Msa1439250:intergenic | 40.0% | |
| TGATGGTCATCTTGTCAAAG+GGG | + | tig0028731:4886-4905 | Msa1439250:CDS | 40.0% | |
| TCATCTTGTCAAAGGGGAAA+AGG | + | tig0028731:4892-4911 | Msa1439250:CDS | 40.0% | |
| !!! | TCAATGGGGTTTGGCTTTTA+TGG | + | tig0028731:4951-4970 | Msa1439250:three_prime_UTR | 40.0% |
| TATCCAAAAATGGTGCTTGC+TGG | + | tig0028731:3467-3486 | Msa1439250:exon | 40.0% | |
| ! | TTACCAGCAAGCACCATTTT+TGG | - | tig0028731:3473-3492 | Msa1439250:intergenic | 40.0% |
| AGTTTGTAGAACTTGTCAGC+TGG | - | tig0028731:3524-3543 | Msa1439250:intergenic | 40.0% | |
| TCATCATACCAAGCTTCATG+AGG | + | tig0028731:3589-3608 | Msa1439250:CDS | 40.0% | |
| CATCATACCAAGCTTCATGA+GGG | + | tig0028731:3590-3609 | Msa1439250:CDS | 40.0% | |
| TGAGACTGATCTAACAACGA+AGG | + | tig0028731:3828-3847 | Msa1439250:intron | 40.0% | |
| GAGTAGCATCTCTTTCCTTT+AGG | - | tig0028731:4137-4156 | Msa1439250:intergenic | 40.0% | |
| AACCACCTTTGTATTCACCA+TGG | + | tig0028731:4157-4176 | Msa1439250:intron | 40.0% | |
| TACCATGGTGAATACAAAGG+TGG | - | tig0028731:4162-4181 | Msa1439250:intergenic | 40.0% | |
| TCGTACCATGGTGAATACAA+AGG | - | tig0028731:4165-4184 | Msa1439250:intergenic | 40.0% | |
| ! | CGTCTTTAGACATTTTCCGA+AGG | - | tig0028731:4278-4297 | Msa1439250:intergenic | 40.0% |
| GAGGATGTTGATACTCCAAA+TGG | + | tig0028731:4827-4846 | Msa1439250:CDS | 40.0% | |
| ATGTTGATACTCCAAATGGC+TGG | + | tig0028731:4831-4850 | Msa1439250:CDS | 40.0% | |
| TATCTCTAGTGCTCTTGCTA+AGG | - | tig0028731:4865-4884 | Msa1439250:intergenic | 40.0% | |
| TGATGGTCATCTTGTCAAAG+GGG | + | tig0028731:4886-4905 | Msa1439250:CDS | 40.0% | |
| TCATCTTGTCAAAGGGGAAA+AGG | + | tig0028731:4892-4911 | Msa1439250:CDS | 40.0% | |
| !!! | TCAATGGGGTTTGGCTTTTA+TGG | + | tig0028731:4951-4970 | Msa1439250:three_prime_UTR | 40.0% |
| ATCTTCACCCTCATGAAGCT+TGG | - | tig0028731:3600-3619 | Msa1439250:intergenic | 45.0% | |
| AGCTTCATGAGGGTGAAGAT+TGG | + | tig0028731:3600-3619 | Msa1439250:CDS | 45.0% | |
| TTGTACACGAGGTGAAGTAC+TGG | + | tig0028731:3980-3999 | Msa1439250:intron | 45.0% | |
| GCCTCTGACATAACAACAGA+TGG | + | tig0028731:4623-4642 | Msa1439250:intron | 45.0% | |
| GCCATCTGTTGTTATGTCAG+AGG | - | tig0028731:4627-4646 | Msa1439250:intergenic | 45.0% | |
| TGACATAACAACAGATGGCG+AGG | + | tig0028731:4628-4647 | Msa1439250:intron | 45.0% | |
| ! | GAAGTGCTTAACAAGGCTGA+TGG | + | tig0028731:4761-4780 | Msa1439250:CDS | 45.0% |
| TGATACTCCAAATGGCTGGA+TGG | + | tig0028731:4835-4854 | Msa1439250:CDS | 45.0% | |
| ATCTTCACCCTCATGAAGCT+TGG | - | tig0028731:3600-3619 | Msa1439250:intergenic | 45.0% | |
| AGCTTCATGAGGGTGAAGAT+TGG | + | tig0028731:3600-3619 | Msa1439250:CDS | 45.0% | |
| TTGTACACGAGGTGAAGTAC+TGG | + | tig0028731:3980-3999 | Msa1439250:intron | 45.0% | |
| GCCTCTGACATAACAACAGA+TGG | + | tig0028731:4623-4642 | Msa1439250:intron | 45.0% | |
| GCCATCTGTTGTTATGTCAG+AGG | - | tig0028731:4627-4646 | Msa1439250:intergenic | 45.0% | |
| TGACATAACAACAGATGGCG+AGG | + | tig0028731:4628-4647 | Msa1439250:intron | 45.0% | |
| ! | GAAGTGCTTAACAAGGCTGA+TGG | + | tig0028731:4761-4780 | Msa1439250:CDS | 45.0% |
| TGATACTCCAAATGGCTGGA+TGG | + | tig0028731:4835-4854 | Msa1439250:CDS | 45.0% | |
| !!! | TAATTTAGAATTTTTTTAAT+TGG | + | tig0028731:3872-3891 | Msa1439250:intron | 5.0% |
| !! | AATTAATAAAAAAAAAGTAA+CGG | - | tig0028731:4034-4053 | Msa1439250:intergenic | 5.0% |
| !! | AAATAATATATATTATGAAT+GGG | - | tig0028731:4074-4093 | Msa1439250:intergenic | 5.0% |
| !! | TAAATAATATATATTATGAA+TGG | - | tig0028731:4075-4094 | Msa1439250:intergenic | 5.0% |
| !! | AATATATATTATTTAGAAAA+AGG | + | tig0028731:4080-4099 | Msa1439250:intron | 5.0% |
| !!! | TAATTTAGAATTTTTTTAAT+TGG | + | tig0028731:3872-3891 | Msa1439250:intron | 5.0% |
| !! | AATTAATAAAAAAAAAGTAA+CGG | - | tig0028731:4034-4053 | Msa1439250:intergenic | 5.0% |
| !! | AAATAATATATATTATGAAT+GGG | - | tig0028731:4074-4093 | Msa1439250:intergenic | 5.0% |
| !! | TAAATAATATATATTATGAA+TGG | - | tig0028731:4075-4094 | Msa1439250:intergenic | 5.0% |
| !! | AATATATATTATTTAGAAAA+AGG | + | tig0028731:4080-4099 | Msa1439250:intron | 5.0% |
| AGGTAGTCCATCCAGCCATT+TGG | - | tig0028731:4845-4864 | Msa1439250:intergenic | 50.0% | |
| AGGTAGTCCATCCAGCCATT+TGG | - | tig0028731:4845-4864 | Msa1439250:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0028731 | gene | 3386 | 5213 | 3386 | ID=Msa1439250;Name=Msa1439250 |
| tig0028731 | mRNA | 3386 | 5213 | 3386 | ID=Msa1439250-mRNA-1;Parent=Msa1439250;Name=Msa1439250-mRNA-1;_AED=0.01;_eAED=0.01;_QI=90|1|1|1|1|1|2|288|156 |
| tig0028731 | exon | 3386 | 3662 | 3386 | ID=Msa1439250-mRNA-1:exon:11674;Parent=Msa1439250-mRNA-1 |
| tig0028731 | exon | 4642 | 5213 | 4642 | ID=Msa1439250-mRNA-1:exon:11675;Parent=Msa1439250-mRNA-1 |
| tig0028731 | five_prime_UTR | 3386 | 3475 | 3386 | ID=Msa1439250-mRNA-1:five_prime_utr;Parent=Msa1439250-mRNA-1 |
| tig0028731 | CDS | 3476 | 3662 | 3476 | ID=Msa1439250-mRNA-1:cds;Parent=Msa1439250-mRNA-1 |
| tig0028731 | CDS | 4642 | 4925 | 4642 | ID=Msa1439250-mRNA-1:cds;Parent=Msa1439250-mRNA-1 |
| tig0028731 | three_prime_UTR | 4926 | 5213 | 4926 | ID=Msa1439250-mRNA-1:three_prime_utr;Parent=Msa1439250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
