AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0734750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0734750 MtrunA17_Chr5g0431441 89.845 453 45 1 12 463 18 470 0.0 845
Msa0734750 MtrunA17_Chr3g0106231 52.361 466 197 9 1 459 5 452 6.54e-164 471
Msa0734750 MtrunA17_Chr5g0431361 49.667 451 214 7 12 458 12 453 6.66e-151 437
Msa0734750 MtrunA17_Chr5g0431421 47.253 455 218 9 12 459 10 449 2.46e-141 412
Msa0734750 MtrunA17_Chr5g0431371 46.930 456 216 9 12 458 10 448 1.50e-139 408
Msa0734750 MtrunA17_Chr5g0431401 46.053 456 220 9 12 458 10 448 3.39e-138 404
Msa0734750 MtrunA17_Chr5g0431431 47.229 415 147 6 5 417 3 347 3.40e-127 373
Msa0734750 MtrunA17_Chr5g0432731 55.705 298 128 3 166 460 2 298 1.31e-117 346
Msa0734750 MtrunA17_Chr3g0106251 56.164 292 123 4 169 459 7 294 1.68e-112 334
Msa0734750 MtrunA17_Chr6g0454191 30.928 485 285 16 12 459 10 481 7.45e-61 206
Msa0734750 MtrunA17_Chr6g0454401 30.488 492 278 17 12 459 10 481 1.30e-60 205
Msa0734750 MtrunA17_Chr3g0078841 31.328 482 284 16 12 459 10 478 2.66e-59 202
Msa0734750 MtrunA17_Chr3g0118771 31.120 482 287 15 12 460 21 490 5.65e-59 201
Msa0734750 MtrunA17_Chr6g0454331 30.675 489 282 15 12 459 7 479 7.91e-59 201
Msa0734750 MtrunA17_Chr8g0359821 30.705 482 287 16 12 459 10 478 1.20e-58 200
Msa0734750 MtrunA17_Chr3g0118671 30.353 481 290 15 12 459 6 474 1.44e-58 200
Msa0734750 MtrunA17_Chr3g0118691 30.435 483 289 15 12 460 15 484 2.23e-58 199
Msa0734750 MtrunA17_Chr6g0454291 31.893 486 278 17 12 459 7 477 8.34e-58 197
Msa0734750 MtrunA17_Chr6g0454341 31.006 487 279 17 12 459 10 478 1.93e-57 197
Msa0734750 MtrunA17_Chr2g0278711 30.063 479 292 15 12 459 11 477 2.77e-57 196
Msa0734750 MtrunA17_Chr6g0453951 31.148 488 279 17 12 459 57 527 2.84e-57 197
Msa0734750 MtrunA17_Chr6g0464861 30.193 467 282 12 12 458 11 453 1.17e-56 194
Msa0734750 MtrunA17_Chr7g0217881 31.866 477 272 17 12 459 10 462 1.19e-56 194
Msa0734750 MtrunA17_Chr6g0452771 31.781 494 268 18 12 459 10 480 1.30e-56 195
Msa0734750 MtrunA17_Chr3g0118711 29.388 490 301 13 4 460 5 482 1.41e-56 194
Msa0734750 MtrunA17_Chr6g0454121 31.352 488 277 19 12 459 10 479 3.79e-56 193
Msa0734750 MtrunA17_Chr6g0454181 30.928 485 284 17 12 459 10 480 4.53e-56 193
Msa0734750 MtrunA17_Chr6g0464881 29.701 468 286 15 12 459 11 455 9.24e-56 192
Msa0734750 MtrunA17_Chr8g0380531 30.556 468 284 15 12 458 10 457 1.20e-55 191
Msa0734750 MtrunA17_Chr4g0050341 30.181 497 283 16 1 455 13 487 1.41e-55 192
Msa0734750 MtrunA17_Chr6g0454131 31.622 487 277 18 12 459 10 479 1.81e-55 192
Msa0734750 MtrunA17_Chr3g0112771 28.726 463 291 11 13 459 13 452 2.02e-55 191
Msa0734750 MtrunA17_Chr6g0453961 30.143 491 287 16 9 459 16 490 2.39e-55 191
Msa0734750 MtrunA17_Chr6g0454141 28.893 488 290 16 12 459 10 480 4.56e-55 191
Msa0734750 MtrunA17_Chr3g0118701 29.668 482 294 14 12 460 15 484 8.07e-55 190
Msa0734750 MtrunA17_Chr6g0454361 29.630 486 289 14 12 459 11 481 1.06e-54 189
Msa0734750 MtrunA17_Chr6g0454261 28.953 487 291 15 12 459 10 480 1.07e-54 189
Msa0734750 MtrunA17_Chr8g0377921 29.263 475 293 13 13 459 5 464 2.77e-54 188
Msa0734750 MtrunA17_Chr5g0414331 30.258 466 275 16 12 455 13 450 3.37e-54 188
Msa0734750 MtrunA17_Chr6g0454201 31.276 486 281 17 12 459 11 481 4.16e-54 188
Msa0734750 MtrunA17_Chr8g0336331 29.012 486 291 16 11 459 9 477 4.82e-54 188
Msa0734750 MtrunA17_Chr6g0454351 30.228 483 273 17 12 459 12 465 1.17e-53 186
Msa0734750 MtrunA17_Chr6g0454301 29.835 486 286 16 12 459 263 731 1.52e-53 191
Msa0734750 MtrunA17_Chr6g0454301 36.245 229 126 5 240 455 5 226 1.21e-36 143
Msa0734750 MtrunA17_Chr6g0464871 29.310 464 293 14 11 458 22 466 1.84e-53 186
Msa0734750 MtrunA17_Chr7g0250001 29.237 472 283 16 12 460 6 449 3.75e-53 185
Msa0734750 MtrunA17_Chr6g0454151 30.579 484 285 18 12 459 10 478 7.59e-53 184
Msa0734750 MtrunA17_Chr8g0377941 29.498 478 283 11 13 459 8 462 1.29e-52 184
Msa0734750 MtrunA17_Chr6g0454211 30.849 483 287 15 12 459 297 767 5.09e-52 187
Msa0734750 MtrunA17_Chr6g0454211 28.148 270 151 8 123 377 3 244 1.74e-20 94.7
Msa0734750 MtrunA17_Chr3g0092641 29.167 480 295 17 12 459 12 478 5.32e-52 182
Msa0734750 MtrunA17_Chr6g0464841 28.755 466 295 13 10 458 9 454 1.16e-51 181
Msa0734750 MtrunA17_Chr7g0249981 29.512 471 283 16 12 460 25 468 1.49e-51 181
Msa0734750 MtrunA17_Chr6g0454321 29.787 470 277 17 12 444 10 463 1.97e-51 184
Msa0734750 MtrunA17_Chr5g0426431 29.607 483 291 18 11 459 11 478 3.31e-51 180
Msa0734750 MtrunA17_Chr3g0118751 30.297 472 275 14 12 460 6 446 5.96e-51 179
Msa0734750 MtrunA17_Chr6g0464921 29.095 464 293 13 12 458 11 455 1.61e-50 178
Msa0734750 MtrunA17_Chr1g0207981 27.551 490 290 16 9 459 10 473 6.45e-50 177
Msa0734750 MtrunA17_Chr5g0432741 52.229 157 72 1 7 163 5 158 7.59e-50 167
Msa0734750 MtrunA17_Chr7g0265051 28.074 488 306 12 9 459 6 485 2.84e-49 176
Msa0734750 MtrunA17_Chr3g0118661 29.400 483 293 16 12 460 13 481 5.23e-49 174
Msa0734750 MtrunA17_Chr5g0414321 28.692 474 288 14 12 463 11 456 6.74e-49 174
Msa0734750 MtrunA17_Chr5g0423981 29.769 477 271 17 9 459 7 445 6.87e-49 173
Msa0734750 MtrunA17_Chr3g0112761 27.312 465 301 9 11 459 7 450 1.89e-48 172
Msa0734750 MtrunA17_Chr7g0232411 29.645 479 276 14 10 451 4 458 1.99e-48 172
Msa0734750 MtrunA17_Chr7g0265101 27.273 495 303 13 9 459 6 487 3.01e-48 173
Msa0734750 MtrunA17_Chr7g0249931 27.696 473 313 11 1 460 29 485 1.09e-47 171
Msa0734750 MtrunA17_Chr1g0207971 28.541 466 298 14 10 458 6 453 3.08e-47 169
Msa0734750 MtrunA17_Chr3g0121991 28.138 494 281 16 12 458 79 545 4.55e-47 171
Msa0734750 MtrunA17_Chr5g0401721 26.694 487 297 15 13 461 9 473 1.08e-46 168
Msa0734750 MtrunA17_Chr4g0053321 27.601 471 308 13 9 459 23 480 1.52e-46 168
Msa0734750 MtrunA17_Chr4g0032331 29.512 471 279 14 13 459 9 450 2.25e-46 166
Msa0734750 MtrunA17_Chr7g0243631 29.560 477 289 15 12 451 13 479 3.67e-46 167
Msa0734750 MtrunA17_Chr5g0448521 26.908 498 280 14 13 460 6 469 5.73e-46 166
Msa0734750 MtrunA17_Chr3g0098111 28.131 487 284 15 12 458 9 469 1.02e-45 165
Msa0734750 MtrunA17_Chr5g0412111 27.637 474 303 14 10 458 3 461 1.93e-45 164
Msa0734750 MtrunA17_Chr7g0232391 29.512 471 279 13 10 447 4 454 4.84e-45 163
Msa0734750 MtrunA17_Chr4g0011051 27.475 495 303 14 9 459 6 488 5.95e-45 164
Msa0734750 MtrunA17_Chr8g0373301 30.398 477 267 16 9 447 6 455 2.24e-44 161
Msa0734750 MtrunA17_Chr3g0122001 28.033 478 302 15 12 458 486 952 5.09e-44 165
Msa0734750 MtrunA17_Chr3g0122001 27.708 480 302 16 12 458 6 473 1.63e-42 161
Msa0734750 MtrunA17_Chr7g0218831 27.692 455 294 12 12 455 6 436 1.16e-43 159
Msa0734750 MtrunA17_Chr8g0347281 28.361 476 275 15 13 451 19 465 2.43e-43 159
Msa0734750 MtrunA17_Chr7g0218791 28.261 460 282 15 12 449 5 438 2.44e-43 158
Msa0734750 MtrunA17_Chr1g0179901 27.381 504 287 15 12 460 16 495 3.30e-43 159
Msa0734750 MtrunA17_Chr4g0044511 28.747 487 285 20 12 458 40 504 3.37e-43 159
Msa0734750 MtrunA17_Chr4g0053501 26.316 475 303 17 12 459 11 465 4.04e-43 159
Msa0734750 MtrunA17_Chr8g0365811 27.708 480 305 13 13 463 496 962 6.37e-43 162
Msa0734750 MtrunA17_Chr8g0365811 29.412 493 286 16 12 463 9 480 1.48e-40 155
Msa0734750 MtrunA17_Chr7g0275511 29.106 481 291 15 2 451 7 468 6.68e-43 158
Msa0734750 MtrunA17_Chr7g0218811 26.593 455 300 11 12 455 15 446 7.74e-43 157
Msa0734750 MtrunA17_Chr7g0232341 28.571 476 286 15 10 451 4 459 2.20e-42 156
Msa0734750 MtrunA17_Chr1g0207861 27.273 473 308 13 11 458 7 468 2.23e-42 156
Msa0734750 MtrunA17_Chr8g0347271 28.958 480 267 16 13 451 20 466 3.21e-42 156
Msa0734750 MtrunA17_Chr7g0243681 26.955 486 299 14 12 458 11 479 3.75e-42 156
Msa0734750 MtrunA17_Chr8g0366391 27.642 492 282 17 12 455 9 474 5.18e-42 155
Msa0734750 MtrunA17_Chr8g0355011 29.124 388 198 9 100 459 24 362 5.27e-42 153
Msa0734750 MtrunA17_Chr1g0207951 28.631 482 280 14 12 458 656 1108 5.73e-42 159
Msa0734750 MtrunA17_Chr1g0207951 27.708 480 288 15 12 461 124 574 8.89e-42 159
Msa0734750 MtrunA17_Chr8g0336741 28.200 461 291 11 12 446 13 459 5.82e-42 155
Msa0734750 MtrunA17_Chr7g0218841 27.802 464 283 14 12 455 6 437 9.15e-42 154
Msa0734750 MtrunA17_Chr7g0232331 29.424 469 283 16 10 447 4 455 9.56e-42 154
Msa0734750 MtrunA17_Chr3g0118721 34.091 264 152 6 212 460 35 291 1.04e-41 150
Msa0734750 MtrunA17_Chr7g0243771 28.421 475 293 14 12 451 6 468 1.11e-41 154
Msa0734750 MtrunA17_Chr5g0419771 26.969 508 283 14 12 460 36 514 1.23e-41 155
Msa0734750 MtrunA17_Chr7g0243871 27.292 480 300 14 12 458 9 472 2.35e-41 154
Msa0734750 MtrunA17_Chr7g0243931 26.360 478 303 12 12 451 17 483 2.49e-41 154
Msa0734750 MtrunA17_Chr1g0207831 27.917 480 287 14 13 458 9 463 2.82e-41 153
Msa0734750 MtrunA17_Chr5g0412101 28.257 499 288 16 1 458 1 470 3.38e-41 153
Msa0734750 MtrunA17_Chr7g0275681 26.008 496 293 15 12 459 12 481 3.61e-41 153
Msa0734750 MtrunA17_Chr1g0153451 27.907 473 296 14 10 454 4 459 3.69e-41 153
Msa0734750 MtrunA17_Chr8g0336691 27.004 474 302 13 10 454 917 1375 4.70e-41 157
Msa0734750 MtrunA17_Chr8g0336691 27.349 479 294 13 10 454 11 469 5.72e-41 157
Msa0734750 MtrunA17_Chr8g0336691 27.617 449 297 12 10 451 478 905 8.50e-37 144
Msa0734750 MtrunA17_Chr3g0106241 53.901 141 53 3 11 148 17 148 1.15e-40 144
Msa0734750 MtrunA17_Chr1g0159551 27.813 471 281 16 17 458 19 459 1.16e-40 151
Msa0734750 MtrunA17_Chr5g0412131 27.386 482 291 17 12 458 12 469 3.27e-40 150
Msa0734750 MtrunA17_Chr7g0265151 26.667 495 305 16 9 460 6 485 4.30e-40 150
Msa0734750 MtrunA17_Chr7g0265141 25.773 485 308 15 12 455 9 482 4.73e-40 150
Msa0734750 MtrunA17_Chr8g0335161 27.475 495 286 16 11 462 5 469 9.43e-40 149
Msa0734750 MtrunA17_Chr7g0235051 26.526 475 275 11 12 451 11 446 1.44e-39 148
Msa0734750 MtrunA17_Chr1g0173121 28.361 476 283 16 13 458 15 462 1.74e-39 148
Msa0734750 MtrunA17_Chr6g0454251 29.949 394 234 12 12 369 7 394 2.90e-39 146
Msa0734750 MtrunA17_Chr8g0361371 25.988 481 301 11 11 455 6 467 2.93e-39 147
Msa0734750 MtrunA17_Chr8g0339451 30.412 388 215 12 103 454 91 459 3.26e-39 147
Msa0734750 MtrunA17_Chr7g0218821 29.221 462 279 15 12 449 5 442 3.56e-39 147
Msa0734750 MtrunA17_Chr6g0449931 27.088 491 265 14 11 447 5 456 4.47e-39 147
Msa0734750 MtrunA17_Chr8g0336651 27.731 476 292 14 10 451 779 1236 5.70e-39 150
Msa0734750 MtrunA17_Chr8g0336651 27.061 473 295 13 10 451 4 457 4.10e-37 145
Msa0734750 MtrunA17_Chr8g0336651 33.466 251 145 6 204 451 536 767 1.38e-32 132
Msa0734750 MtrunA17_Chr7g0232401 28.025 471 288 14 10 447 4 456 6.15e-39 147
Msa0734750 MtrunA17_Chr7g0243951 25.684 475 309 12 12 451 11 476 7.07e-39 147
Msa0734750 MtrunA17_Chr8g0339461 29.948 384 213 12 113 459 111 475 8.23e-39 146
Msa0734750 MtrunA17_Chr5g0419761 24.900 498 304 10 12 459 9 486 9.41e-39 146
Msa0734750 MtrunA17_Chr8g0339601 31.988 322 167 8 151 446 23 318 1.31e-38 142
Msa0734750 MtrunA17_Chr1g0161351 25.895 475 318 13 8 458 33 497 1.39e-38 146
Msa0734750 MtrunA17_Chr7g0243801 26.915 483 290 13 12 451 7 469 1.63e-38 146
Msa0734750 MtrunA17_Chr6g0454271 31.864 295 163 9 193 459 3 287 3.25e-38 140
Msa0734750 MtrunA17_Chr5g0429711 28.723 470 295 17 11 458 10 461 5.26e-38 144
Msa0734750 MtrunA17_Chr7g0232311 32.792 308 155 9 176 451 169 456 8.38e-38 143
Msa0734750 MtrunA17_Chr7g0249961 39.286 196 112 4 269 460 69 261 8.89e-38 139
Msa0734750 MtrunA17_Chr4g0044501 26.411 496 313 16 1 460 1 480 9.05e-38 144
Msa0734750 MtrunA17_Chr8g0335141 27.812 489 287 20 13 462 10 471 2.01e-37 142
Msa0734750 MtrunA17_Chr8g0339631 29.189 370 218 10 113 454 111 464 5.01e-37 141
Msa0734750 MtrunA17_Chr7g0265111 24.641 487 319 13 12 459 39 516 1.25e-36 141
Msa0734750 MtrunA17_Chr8g0370941 27.621 496 283 16 11 451 7 481 1.35e-36 141
Msa0734750 MtrunA17_Chr7g0265041 25.506 494 309 14 12 460 11 490 1.75e-36 140
Msa0734750 MtrunA17_Chr4g0066201 25.820 488 286 15 16 460 22 476 3.13e-36 139
Msa0734750 MtrunA17_Chr7g0243781 26.694 487 297 15 12 458 9 475 3.50e-36 139
Msa0734750 MtrunA17_Chr6g0454221 35.961 203 114 3 269 462 39 234 3.81e-36 135
Msa0734750 MtrunA17_Chr8g0374941 24.689 482 307 13 16 458 953 1417 6.89e-36 141
Msa0734750 MtrunA17_Chr8g0374941 24.459 462 299 13 16 441 15 462 7.42e-31 126
Msa0734750 MtrunA17_Chr8g0374941 25.214 468 286 14 16 440 480 926 1.46e-29 122
Msa0734750 MtrunA17_Chr6g0459311 26.931 479 292 15 11 454 12 467 9.06e-36 138
Msa0734750 MtrunA17_Chr5g0442561 25.352 497 292 16 11 459 4 469 1.41e-35 137
Msa0734750 MtrunA17_Chr4g0060511 26.096 479 306 13 12 451 11 480 1.54e-35 137
Msa0734750 MtrunA17_Chr4g0066221 25.833 480 305 15 16 458 15 480 1.56e-35 137
Msa0734750 MtrunA17_Chr4g0014061 26.230 488 296 17 13 460 10 473 2.79e-35 137
Msa0734750 MtrunA17_Chr6g0462571 25.207 484 289 14 13 454 5 457 2.94e-35 136
Msa0734750 MtrunA17_Chr8g0336731 30.921 304 175 8 176 455 195 487 3.37e-35 137
Msa0734750 MtrunA17_Chr4g0066171 26.860 484 281 18 16 458 25 476 6.37e-35 135
Msa0734750 MtrunA17_Chr5g0393591 24.893 466 284 12 12 458 17 435 8.79e-35 135
Msa0734750 MtrunA17_Chr3g0079731 25.662 491 295 16 10 451 4 473 1.04e-34 135
Msa0734750 MtrunA17_Chr7g0243861 26.722 479 300 11 12 451 14 480 1.08e-34 135
Msa0734750 MtrunA17_Chr8g0334831 25.255 491 301 12 11 455 5 475 1.50e-34 135
Msa0734750 MtrunA17_Chr5g0442581 26.000 500 295 17 11 460 4 478 3.76e-34 134
Msa0734750 MtrunA17_Chr6g0486251 25.820 488 286 16 11 454 5 460 4.19e-34 133
Msa0734750 MtrunA17_Chr6g0486201 25.820 488 286 16 11 454 5 460 4.19e-34 133
Msa0734750 MtrunA17_Chr5g0442491 24.949 489 312 14 11 460 4 476 5.43e-34 133
Msa0734750 MtrunA17_Chr5g0442521 24.744 489 310 15 13 460 6 477 7.98e-34 132
Msa0734750 MtrunA17_Chr4g0066151 25.662 491 284 18 16 458 22 479 1.07e-33 132
Msa0734750 MtrunA17_Chr5g0440421 24.852 507 302 16 12 460 10 495 1.66e-33 132
Msa0734750 MtrunA17_Chr8g0350881 25.104 482 311 13 13 458 13 480 1.88e-33 132
Msa0734750 MtrunA17_Chr1g0207931 32.422 256 158 4 216 458 244 497 1.90e-33 132
Msa0734750 MtrunA17_Chr6g0454171 31.086 267 141 8 211 459 69 310 2.34e-33 128
Msa0734750 MtrunA17_Chr8g0339441 35.849 212 106 5 269 454 218 425 2.45e-33 130
Msa0734750 MtrunA17_Chr8g0374901 24.532 481 307 13 16 458 16 478 4.48e-33 130
Msa0734750 MtrunA17_Chr2g0302961 24.590 488 300 14 12 458 5 465 5.34e-33 130
Msa0734750 MtrunA17_Chr6g0462531 25.532 470 294 14 13 447 5 453 5.72e-33 130
Msa0734750 MtrunA17_Chr6g0462541 25.895 475 295 12 13 452 5 457 6.79e-33 130
Msa0734750 MtrunA17_Chr2g0302991 25.000 476 304 14 12 455 5 459 7.18e-33 129
Msa0734750 MtrunA17_Chr7g0243851 25.000 476 270 12 12 451 11 435 9.40e-33 129
Msa0734750 MtrunA17_Chr5g0429681 28.025 471 280 17 11 447 43 488 9.60e-33 130
Msa0734750 MtrunA17_Chr5g0401851 26.069 491 294 13 9 451 7 476 1.15e-32 129
Msa0734750 MtrunA17_Chr8g0355221 25.410 488 299 18 13 455 16 483 1.23e-32 129
Msa0734750 MtrunA17_Chr5g0448551 25.754 431 287 12 13 423 8 425 1.72e-32 128
Msa0734750 MtrunA17_Chr2g0307961 25.255 491 296 17 9 459 10 469 1.81e-32 129
Msa0734750 MtrunA17_Chr5g0442541 25.667 487 300 14 11 459 4 466 1.94e-32 128
Msa0734750 MtrunA17_Chr5g0442601 24.395 496 308 14 11 460 403 877 2.30e-32 130
Msa0734750 MtrunA17_Chr5g0442601 33.113 151 79 2 267 395 187 337 6.19e-19 90.1
Msa0734750 MtrunA17_Chr8g0361411 26.427 473 295 15 9 455 5 450 2.46e-32 128
Msa0734750 MtrunA17_Chr6g0462551 26.749 486 282 16 13 454 5 460 2.64e-32 128
Msa0734750 MtrunA17_Chr5g0426401 29.032 310 188 10 170 459 14 311 7.80e-32 124
Msa0734750 MtrunA17_Chr4g0066261 25.051 491 296 15 16 458 15 481 8.04e-32 127
Msa0734750 MtrunA17_Chr8g0374971 23.591 479 316 13 16 458 16 480 1.10e-31 127
Msa0734750 MtrunA17_Chr4g0066281 24.689 482 293 17 16 458 16 466 1.39e-31 126
Msa0734750 MtrunA17_Chr4g0042891 31.849 292 139 13 199 455 196 462 3.78e-31 125
Msa0734750 MtrunA17_Chr4g0044521 31.359 287 157 9 195 455 191 463 7.23e-31 124
Msa0734750 MtrunA17_Chr6g0463891 25.053 475 310 13 13 451 13 477 1.20e-30 124
Msa0734750 MtrunA17_Chr1g0153461 32.243 214 114 5 266 454 1 208 1.99e-30 117
Msa0734750 MtrunA17_Chr8g0334851 28.297 364 223 11 114 454 114 462 2.14e-30 123
Msa0734750 MtrunA17_Chr6g0462521 25.813 461 290 13 13 447 5 439 2.61e-30 122
Msa0734750 MtrunA17_Chr8g0367221 25.223 448 296 14 12 433 1288 1722 3.30e-30 124
Msa0734750 MtrunA17_Chr8g0367221 25.000 456 286 19 12 433 12 445 3.70e-24 106
Msa0734750 MtrunA17_Chr8g0367221 23.043 460 294 16 12 436 798 1232 1.24e-21 98.6
Msa0734750 MtrunA17_Chr7g0243711 32.129 249 128 6 241 451 64 309 3.55e-30 119
Msa0734750 MtrunA17_Chr8g0334861 29.474 380 210 14 104 447 95 452 4.10e-30 122
Msa0734750 MtrunA17_Chr8g0369341 26.033 484 295 16 11 455 6 465 4.67e-30 122
Msa0734750 MtrunA17_Chr8g0382021 34.762 210 116 3 269 458 280 488 4.89e-30 122
Msa0734750 MtrunA17_Chr2g0294931 34.742 213 115 4 267 455 266 478 7.46e-30 121
Msa0734750 MtrunA17_Chr7g0243761 25.974 462 284 16 12 428 11 459 1.21e-29 120
Msa0734750 MtrunA17_Chr8g0336251 25.386 453 290 14 10 432 5 439 1.23e-29 120
Msa0734750 MtrunA17_Chr8g0336321 25.386 453 290 14 10 432 5 439 1.68e-29 120
Msa0734750 MtrunA17_Chr5g0428081 34.649 228 122 6 254 455 250 476 2.17e-29 120
Msa0734750 MtrunA17_Chr7g0218311 33.784 222 123 4 254 451 255 476 2.34e-29 120
Msa0734750 MtrunA17_Chr1g0165701 34.259 216 115 6 262 455 270 480 1.17e-28 118
Msa0734750 MtrunA17_Chr4g0042931 24.949 489 291 18 10 455 5 460 1.25e-28 117
Msa0734750 MtrunA17_Chr4g0066131 31.308 214 122 4 267 455 258 471 1.47e-28 117
Msa0734750 MtrunA17_Chr5g0403641 25.207 484 271 16 12 451 59 495 1.58e-28 118
Msa0734750 MtrunA17_Chr5g0431391 37.500 160 65 3 5 164 34 158 1.86e-28 112
Msa0734750 MtrunA17_Chr6g0463861 30.415 217 126 2 267 458 257 473 2.16e-28 117
Msa0734750 MtrunA17_Chr7g0241781 24.318 440 285 16 8 436 5 407 2.30e-28 116
Msa0734750 MtrunA17_Chr7g0243911 37.037 189 98 4 265 433 18 205 2.36e-28 112
Msa0734750 MtrunA17_Chr5g0416741 29.588 267 145 6 217 451 221 476 4.24e-28 116
Msa0734750 MtrunA17_Chr6g0454371 33.146 178 103 3 291 459 1 171 5.58e-28 109
Msa0734750 MtrunA17_Chr5g0409591 24.842 475 288 13 10 433 2 458 6.11e-28 115
Msa0734750 MtrunA17_Chr5g0442511 29.104 268 151 6 210 447 224 482 9.24e-28 115
Msa0734750 MtrunA17_Chr5g0410941 25.000 476 311 16 16 458 27 489 4.05e-27 114
Msa0734750 MtrunA17_Chr6g0463851 24.950 497 290 16 16 458 15 482 6.63e-27 113
Msa0734750 MtrunA17_Chr2g0294941 27.348 362 219 10 111 441 14 362 3.75e-26 109
Msa0734750 MtrunA17_Chr2g0278721 24.503 453 297 16 12 439 15 447 3.83e-26 112
Msa0734750 MtrunA17_Chr2g0278721 23.542 463 286 18 12 433 517 952 9.00e-21 95.9
Msa0734750 MtrunA17_Chr6g0482061 24.689 482 307 16 10 452 9 473 3.96e-26 110
Msa0734750 MtrunA17_Chr2g0294921 24.224 483 304 15 16 455 164 627 3.97e-26 111
Msa0734750 MtrunA17_Chr8g0374931 31.696 224 127 4 267 464 266 489 5.61e-26 110
Msa0734750 MtrunA17_Chr4g0072771 22.363 474 302 13 12 455 25 462 8.97e-26 109
Msa0734750 MtrunA17_Chr7g0232351 28.244 393 231 12 10 369 4 378 1.02e-25 108
Msa0734750 MtrunA17_Chr2g0329111 24.297 498 294 19 13 455 7 476 2.01e-25 108
Msa0734750 MtrunA17_Chr1g0207881 23.965 459 255 13 12 458 8 384 2.91e-25 107
Msa0734750 MtrunA17_Chr8g0336261 37.162 148 73 3 291 429 1 137 2.59e-24 98.2
Msa0734750 MtrunA17_Chr7g0241801 24.439 446 277 17 8 436 5 407 2.80e-24 104
Msa0734750 MtrunA17_Chr2g0278741 24.454 458 291 17 12 439 97 529 4.06e-24 105
Msa0734750 MtrunA17_Chr4g0069611 22.838 451 302 15 12 439 15 442 1.37e-23 103
Msa0734750 MtrunA17_Chr4g0044481 24.885 434 248 13 10 410 25 413 1.71e-23 102
Msa0734750 MtrunA17_Chr4g0029131 25.828 453 278 19 12 433 12 437 2.07e-23 103
Msa0734750 MtrunA17_Chr5g0427571 30.802 237 142 7 213 432 42 273 6.54e-23 98.6
Msa0734750 MtrunA17_Chr7g0243611 30.415 217 128 5 217 410 80 296 1.82e-22 97.4
Msa0734750 MtrunA17_Chr5g0420801 32.353 204 118 6 267 455 257 455 2.56e-22 99.4
Msa0734750 MtrunA17_Chr6g0464091 23.404 470 325 15 12 460 18 473 4.71e-22 98.6
Msa0734750 MtrunA17_Chr7g0243811 34.197 193 97 5 212 385 187 368 8.87e-22 97.1
Msa0734750 MtrunA17_Chr4g0072761 23.144 458 299 18 12 447 15 441 9.86e-22 97.4
Msa0734750 MtrunA17_Chr2g0302851 23.840 474 269 19 12 439 16 443 1.83e-21 96.7
Msa0734750 MtrunA17_Chr6g0454231 26.877 253 147 7 210 459 2 219 6.29e-21 95.1
Msa0734750 MtrunA17_Chr6g0454231 29.319 191 117 7 12 186 250 438 2.99e-12 68.6
Msa0734750 MtrunA17_Chr6g0466831 23.661 448 306 16 10 439 16 445 6.97e-21 95.1
Msa0734750 MtrunA17_Chr7g0231631 27.203 261 145 7 217 451 11 252 1.10e-20 91.7
Msa0734750 MtrunA17_Chr3g0079711 32.203 177 94 5 295 447 3 177 1.95e-20 89.0
Msa0734750 MtrunA17_Chr5g0416821 25.797 345 181 12 165 451 139 466 2.18e-20 93.6
Msa0734750 MtrunA17_Chr1g0196851 23.874 444 292 13 12 432 49 469 3.01e-20 93.2
Msa0734750 MtrunA17_Chr4g0039881 23.007 439 296 16 22 439 2 419 2.19e-19 90.5
Msa0734750 MtrunA17_Chr6g0466841 22.889 450 307 13 10 439 16 445 2.19e-19 90.5
Msa0734750 MtrunA17_Chr8g0337381 34.921 126 76 4 330 454 1 121 1.36e-18 82.0
Msa0734750 MtrunA17_Chr4g0066141 30.573 157 94 3 317 458 195 351 2.06e-18 86.7
Msa0734750 MtrunA17_Chr4g0029151 24.283 453 285 16 12 433 20 445 5.04e-18 86.3
Msa0734750 MtrunA17_Chr3g0092031 30.508 177 112 5 271 439 6 179 1.04e-17 81.6
Msa0734750 MtrunA17_Chr2g0319801 22.314 484 291 18 8 444 4 449 3.74e-16 80.5
Msa0734750 MtrunA17_Chr8g0357361 26.829 246 136 7 179 391 14 248 7.26e-16 77.8
Msa0734750 MtrunA17_Chr4g0029161 25.397 441 267 20 12 433 12 409 7.60e-16 79.3
Msa0734750 MtrunA17_Chr6g0453981 30.952 210 120 7 123 315 3 204 1.46e-15 75.9
Msa0734750 MtrunA17_Chr2g0319731 22.403 491 282 19 8 444 21 466 4.80e-15 77.0
Msa0734750 MtrunA17_Chr7g0250021 26.032 315 210 10 10 315 10 310 2.20e-14 73.9
Msa0734750 MtrunA17_Chr4g0040711 23.431 239 162 5 210 436 207 436 4.50e-13 70.9
Msa0734750 MtrunA17_Chr5g0426411 30.488 164 104 6 12 166 12 174 6.54e-13 67.0
Msa0734750 MtrunA17_Chr2g0283041 21.534 339 224 11 109 426 106 423 1.41e-12 69.3
Msa0734750 MtrunA17_Chr2g0319791 21.212 462 299 17 8 433 4 436 6.86e-12 67.4
Msa0734750 MtrunA17_Chr8g0334841 40.566 106 54 4 213 316 37 135 3.35e-11 62.0
Msa0734750 MtrunA17_Chr4g0040691 23.868 243 156 6 210 436 207 436 4.14e-11 64.7
Msa0734750 MtrunA17_Chr6g0454281 30.645 186 108 8 12 178 10 193 4.47e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0734750 AT2G30150.2 50.540 463 213 10 1 458 1 452 1.06e-154 447
Msa0734750 AT2G30150.1 50.559 447 206 9 16 458 1 436 9.25e-151 436
Msa0734750 AT2G30140.1 49.567 462 213 10 4 458 3 451 2.64e-146 426
Msa0734750 AT2G30140.2 49.567 462 212 10 4 458 3 450 8.16e-146 424
Msa0734750 AT2G36970.1 29.668 482 283 13 12 458 10 470 3.94e-66 220
Msa0734750 AT2G28080.1 29.487 468 289 11 16 459 22 472 3.16e-61 207
Msa0734750 AT1G05680.1 31.049 467 278 13 11 455 5 449 5.94e-61 206
Msa0734750 AT2G31750.1 31.224 474 278 15 11 460 7 456 1.28e-60 205
Msa0734750 AT1G05675.1 29.095 464 291 10 11 455 5 449 1.73e-60 204
Msa0734750 AT2G31750.2 31.027 477 281 15 11 463 7 459 3.91e-60 204
Msa0734750 AT2G43840.2 30.490 469 275 13 12 458 7 446 4.16e-57 196
Msa0734750 AT1G22400.1 28.454 485 303 14 12 463 13 486 7.89e-57 196
Msa0734750 AT2G43840.1 30.490 469 275 13 12 458 7 446 8.55e-57 194
Msa0734750 AT1G22360.1 30.000 490 284 17 12 461 10 480 1.75e-55 192
Msa0734750 AT1G78270.1 29.400 483 292 17 12 459 13 481 8.24e-55 190
Msa0734750 AT1G22380.1 29.218 486 299 15 12 464 13 486 9.84e-55 190
Msa0734750 AT4G01070.1 29.053 475 284 14 10 451 6 460 4.77e-54 188
Msa0734750 AT4G15480.1 26.819 481 315 11 6 461 13 481 7.36e-54 188
Msa0734750 AT1G22340.1 28.033 478 306 13 12 459 13 482 8.78e-54 187
Msa0734750 AT2G31790.1 29.614 466 288 15 12 456 8 454 1.94e-53 186
Msa0734750 AT2G43820.1 29.828 466 282 12 12 458 7 446 3.60e-53 185
Msa0734750 AT5G38040.1 29.437 462 273 14 20 458 18 449 5.58e-53 184
Msa0734750 AT3G46660.1 28.017 464 297 12 8 455 10 452 1.24e-52 184
Msa0734750 AT3G21560.1 28.287 502 296 16 1 464 1 476 4.99e-52 183
Msa0734750 AT3G46670.1 28.448 464 293 12 8 455 5 445 1.00e-50 179
Msa0734750 AT1G01420.2 28.931 477 281 14 10 451 9 462 1.69e-50 179
Msa0734750 AT1G01420.1 28.931 477 281 14 10 451 6 459 1.96e-50 178
Msa0734750 AT1G24100.1 28.243 478 292 12 7 458 6 458 2.44e-50 178
Msa0734750 AT1G22360.2 28.571 490 279 16 12 461 10 468 2.61e-50 178
Msa0734750 AT5G38010.1 27.682 466 296 12 12 458 10 453 1.57e-49 175
Msa0734750 AT4G15490.1 27.311 476 312 12 7 459 3 467 4.98e-49 175
Msa0734750 AT5G05900.1 31.116 466 278 14 13 460 9 449 8.01e-48 171
Msa0734750 AT1G10400.1 28.392 479 294 18 11 462 6 462 1.48e-47 171
Msa0734750 AT2G36800.1 28.715 498 294 15 12 464 12 493 3.97e-47 170
Msa0734750 AT2G36750.1 27.495 491 313 13 9 464 7 489 4.22e-47 170
Msa0734750 AT5G59580.1 25.918 463 303 11 12 458 9 447 9.84e-47 168
Msa0734750 AT4G15500.1 27.426 474 299 12 12 459 9 463 1.39e-46 168
Msa0734750 AT3G11340.1 29.310 464 283 14 13 459 10 445 1.40e-46 167
Msa0734750 AT1G22370.2 30.579 484 284 20 12 461 13 478 2.23e-46 167
Msa0734750 AT5G59590.1 25.957 470 297 12 11 458 9 449 2.49e-46 167
Msa0734750 AT3G02100.1 30.131 458 292 14 12 455 13 456 2.60e-46 167
Msa0734750 AT2G26480.1 27.332 461 298 10 13 461 9 444 2.82e-44 161
Msa0734750 AT5G05880.1 29.237 472 278 14 12 458 8 448 2.94e-44 161
Msa0734750 AT2G23250.1 28.446 457 280 14 21 458 7 435 3.22e-44 160
Msa0734750 AT3G46680.1 27.802 464 289 16 12 455 9 446 3.37e-44 161
Msa0734750 AT1G01390.1 28.810 479 288 12 10 455 6 464 5.43e-44 161
Msa0734750 AT2G36780.1 26.210 496 306 16 9 460 11 490 7.56e-44 161
Msa0734750 AT1G01390.2 28.810 479 288 12 10 455 23 481 9.60e-44 160
Msa0734750 AT2G23260.1 26.898 461 308 11 11 458 9 453 1.79e-43 159
Msa0734750 AT1G05560.1 26.585 489 281 17 8 458 3 451 4.42e-43 158
Msa0734750 AT3G46650.1 26.477 457 282 12 13 454 11 428 9.53e-43 157
Msa0734750 AT1G05560.2 26.585 489 281 17 8 458 53 501 1.24e-42 158
Msa0734750 AT4G15550.1 27.743 483 293 15 8 455 9 470 1.95e-42 157
Msa0734750 AT2G36790.1 28.169 497 308 14 2 460 4 489 2.70e-42 157
Msa0734750 AT5G05870.1 29.087 471 286 11 12 458 8 454 2.71e-42 156
Msa0734750 AT5G14860.1 28.457 499 286 20 12 464 8 481 3.09e-42 156
Msa0734750 AT4G15280.1 25.806 496 297 12 12 460 4 475 3.80e-42 156
Msa0734750 AT3G53160.1 26.559 497 297 18 12 460 8 484 4.61e-42 156
Msa0734750 AT4G15280.2 25.806 496 297 12 12 460 36 507 4.99e-42 156
Msa0734750 AT3G46690.1 27.253 455 295 12 12 451 9 442 2.74e-41 153
Msa0734750 AT2G16890.2 28.893 488 277 21 12 458 9 467 3.44e-41 153
Msa0734750 AT3G46700.1 25.546 458 308 11 12 458 9 444 5.11e-41 152
Msa0734750 AT2G36770.1 25.151 497 316 13 9 463 11 493 2.02e-40 152
Msa0734750 AT3G21790.1 26.132 486 309 12 12 458 4 478 2.38e-40 151
Msa0734750 AT3G46720.1 28.821 458 281 15 13 455 10 437 7.25e-40 149
Msa0734750 AT2G36760.1 26.176 489 315 14 9 460 11 490 9.08e-40 150
Msa0734750 AT5G05890.1 28.450 471 287 13 12 458 8 452 1.13e-39 149
Msa0734750 AT3G55700.1 25.957 470 298 14 13 459 9 451 4.43e-39 147
Msa0734750 AT2G15490.3 27.557 479 301 17 12 455 7 474 7.28e-39 147
Msa0734750 AT2G29740.1 27.386 482 302 15 11 458 7 474 8.00e-39 147
Msa0734750 AT2G15480.2 26.923 494 295 19 12 455 10 487 8.13e-39 147
Msa0734750 AT2G15480.1 27.010 485 296 19 12 455 10 477 8.58e-39 147
Msa0734750 AT3G21800.1 25.567 485 307 12 13 458 6 475 8.84e-39 147
Msa0734750 AT5G03490.1 28.450 471 281 18 5 449 14 454 8.85e-39 146
Msa0734750 AT3G21780.1 26.096 479 308 14 12 458 4 468 9.25e-39 147
Msa0734750 AT5G05860.1 28.326 466 290 13 12 459 9 448 1.70e-38 145
Msa0734750 AT4G34131.1 26.693 502 285 19 7 455 5 476 3.79e-38 145
Msa0734750 AT2G15490.1 27.386 482 301 17 12 455 7 477 4.08e-38 145
Msa0734750 AT2G29730.1 32.700 263 161 6 212 464 211 467 8.79e-38 144
Msa0734750 AT1G05530.1 24.790 476 305 11 12 459 5 455 1.66e-37 143
Msa0734750 AT3G53150.1 25.251 499 312 11 12 459 22 510 1.86e-37 144
Msa0734750 AT2G29750.1 27.699 491 294 18 11 461 7 476 3.50e-37 142
Msa0734750 AT3G21750.1 24.949 489 305 14 11 459 3 469 5.19e-37 142
Msa0734750 AT3G21760.1 25.358 489 311 12 12 458 4 480 9.81e-37 141
Msa0734750 AT1G07250.1 36.431 269 147 9 208 460 214 474 2.00e-36 140
Msa0734750 AT5G26310.1 26.458 480 287 19 12 451 7 460 7.31e-36 139
Msa0734750 AT2G16890.3 29.279 444 246 19 12 415 9 424 1.49e-35 137
Msa0734750 AT2G18570.1 28.216 482 277 16 12 451 5 459 3.36e-35 137
Msa0734750 AT4G14090.1 26.724 464 296 16 12 455 13 452 4.71e-35 136
Msa0734750 AT2G29710.1 25.470 479 308 15 11 459 4 463 5.08e-35 136
Msa0734750 AT5G17050.1 23.760 484 319 13 1 460 1 458 8.43e-35 135
Msa0734750 AT3G55710.1 25.738 474 298 17 13 459 9 455 4.21e-34 133
Msa0734750 AT1G07260.1 28.261 368 227 9 115 461 123 474 8.08e-33 130
Msa0734750 AT4G15260.1 28.986 276 161 6 211 460 90 356 2.00e-32 127
Msa0734750 AT4G34138.1 25.474 475 299 14 12 448 11 468 1.49e-31 127
Msa0734750 AT3G50740.1 25.101 494 282 17 12 451 7 466 3.64e-31 125
Msa0734750 AT4G36770.1 26.415 477 270 18 12 441 4 446 3.96e-31 125
Msa0734750 AT5G17030.1 23.800 479 324 15 1 460 1 457 1.54e-30 123
Msa0734750 AT1G73880.1 24.375 480 319 13 5 459 7 467 3.14e-30 122
Msa0734750 AT5G66690.1 26.611 481 282 18 12 449 7 459 3.29e-30 122
Msa0734750 AT5G65550.1 23.581 458 299 14 7 435 4 439 4.16e-30 122
Msa0734750 AT2G18560.1 29.082 392 217 15 96 451 3 369 4.69e-30 120
Msa0734750 AT1G07240.1 30.970 268 161 6 210 459 215 476 4.70e-30 122
Msa0734750 AT4G34135.1 26.327 490 293 17 12 455 11 478 3.46e-29 120
Msa0734750 AT5G37950.1 26.606 327 216 8 58 369 26 343 5.40e-29 117
Msa0734750 AT5G12890.1 26.613 496 293 20 8 455 6 478 1.30e-28 118
Msa0734750 AT5G17040.1 23.391 466 311 11 11 459 4 440 2.49e-28 117
Msa0734750 AT1G22370.1 30.696 316 180 11 170 461 8 308 1.02e-27 112
Msa0734750 AT1G51210.1 25.330 454 288 17 4 433 6 432 2.27e-27 114
Msa0734750 AT3G16520.3 30.916 262 154 9 210 455 206 456 7.77e-27 112
Msa0734750 AT5G49690.1 25.446 448 284 17 12 433 10 433 1.06e-26 112
Msa0734750 AT5G37950.2 25.994 327 212 8 58 369 26 337 1.64e-26 110
Msa0734750 AT4G01070.2 29.063 320 199 10 10 318 6 308 1.79e-26 110
Msa0734750 AT1G30530.1 23.617 470 317 14 7 459 7 451 6.13e-26 110
Msa0734750 AT3G16520.2 35.859 198 106 6 210 391 206 398 4.17e-25 107
Msa0734750 AT3G16520.1 35.859 198 106 6 210 391 206 398 4.84e-25 107
Msa0734750 AT5G17040.2 27.843 255 169 5 210 459 94 338 6.53e-25 105
Msa0734750 AT2G22590.1 21.978 455 304 16 12 436 15 448 1.39e-21 97.4
Msa0734750 AT3G22250.1 32.418 182 96 5 265 430 270 440 7.64e-21 95.1
Msa0734750 AT1G06000.1 22.822 482 279 19 12 458 10 433 2.14e-20 93.6
Msa0734750 AT3G29630.1 21.528 432 288 13 12 415 6 414 7.19e-15 77.0
Msa0734750 AT1G64910.1 21.005 438 298 12 10 429 4 411 5.28e-14 74.3
Msa0734750 AT5G53990.1 20.000 435 302 12 12 429 6 411 6.20e-13 70.9
Msa0734750 AT5G54060.1 21.166 463 336 11 13 459 14 463 4.74e-12 68.2
Msa0734750 AT5G54010.1 20.554 433 308 12 12 429 6 417 5.39e-12 68.2
Msa0734750 AT4G34135.2 24.629 337 200 13 12 315 11 326 1.03e-11 66.6

Find 139 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCAATGGACTAAATTTC+AGG 0.188519 5_1:-49126183 None:intergenic
TACATGATAGTTATTTGTTT+TGG 0.190342 5_1:+49124599 Msa0734750:CDS
CTTCATTGTAGTATCTTCTA+AGG 0.204415 5_1:+49126108 Msa0734750:three_prime_UTR
TAGGCTTGTTAGAAGATTTA+TGG 0.205219 5_1:+49125909 Msa0734750:CDS
TTGAACTTGATTATATAAAT+TGG 0.214972 5_1:+49125470 Msa0734750:CDS
AATAATATGAAAGCCTTTCT+TGG 0.246704 5_1:+49126024 Msa0734750:CDS
GTAGTTCCAATTGTGTAAAT+TGG 0.253261 5_1:-49125394 None:intergenic
AAAGGTTGGTCCATCATTAT+TGG 0.266008 5_1:-49125793 None:intergenic
TGAAGCTGTTGCTACTAAAA+TGG 0.273399 5_1:+49124522 Msa0734750:CDS
GTGGTGGGTGGAGGAGGATT+TGG 0.277697 5_1:-49124262 None:intergenic
GTTAGAAGATTTATGGATTT+GGG 0.281168 5_1:+49125916 Msa0734750:CDS
CATCGTGAAGTTGAAAATCT+TGG 0.286582 5_1:-49125231 None:intergenic
TGTTAGAAGATTTATGGATT+TGG 0.300533 5_1:+49125915 Msa0734750:CDS
AGTGAAAGATAATGGAATTA+TGG 0.305044 5_1:-49124206 None:intergenic
GAAAGATATTTGTGGGGATA+AGG 0.325851 5_1:+49125642 Msa0734750:CDS
AATGAAATTGCGAATGGTTT+GGG 0.326118 5_1:+49125568 Msa0734750:CDS
TATATCTTACTCTTACTCTA+TGG 0.328072 5_1:-49126069 None:intergenic
TCTATACCAATTTACACAAT+TGG 0.329382 5_1:+49125388 Msa0734750:CDS
CAATGAAATTGCGAATGGTT+TGG 0.340709 5_1:+49125567 Msa0734750:CDS
ATCTTTGCCTCGACCTTCTT+CGG 0.344761 5_1:-49124485 None:intergenic
GGGTTGATGTGGCCGCGACC+TGG 0.348374 5_1:-49124307 None:intergenic
AACTAACCTGAAGCATTTAC+TGG 0.357766 5_1:-49124736 None:intergenic
TTGAGGCTCAAGTTCATATA+TGG 0.359393 5_1:-49125338 None:intergenic
AAACGTGTGGATTACATTCC+GGG 0.361089 5_1:+49125190 Msa0734750:CDS
TCTTCGGAGGGAACTACGTT+TGG 0.361946 5_1:-49124469 None:intergenic
ATAGTTGAGGATTGGAAAGT+TGG 0.365038 5_1:+49125829 Msa0734750:CDS
GATTACCCAGTAAATGCTTC+AGG 0.373708 5_1:+49124730 Msa0734750:CDS
CAAACGTGTGGATTACATTC+CGG 0.374925 5_1:+49125189 Msa0734750:CDS
ACCAACTTTCCTACATTCAA+TGG 0.379767 5_1:-49126196 None:intergenic
TTGGTGAAGAAATGTGAAAT+TGG 0.380241 5_1:+49123976 None:intergenic
TATAATCAAGTTCAACATCT+TGG 0.382409 5_1:-49125462 None:intergenic
ATGTTCATGTTGCGTCGTTT+TGG 0.385300 5_1:+49124647 Msa0734750:CDS
CTTTGGCCGTGACTAAAATA+AGG 0.387209 5_1:-49125421 None:intergenic
AAAGATATTTGTGGGGATAA+GGG 0.388826 5_1:+49125643 Msa0734750:CDS
ATTTGGAGAGTGAAAGATAA+TGG 0.394595 5_1:-49124214 None:intergenic
TATGAAAATGTTGAGGTTGT+TGG 0.398570 5_1:-49124359 None:intergenic
TGGCTAGATAATCAACCCTT+TGG 0.406544 5_1:+49125490 Msa0734750:CDS
TGGAGATGGAAATGGTGATT+TGG 0.418330 5_1:-49124231 None:intergenic
CTCCATTTGCAACTGCACTT+TGG 0.421432 5_1:-49125990 None:intergenic
AGCTTGCATAGGTTCATCAT+TGG 0.421746 5_1:-49124328 None:intergenic
TCTTACCTCTCCAATAATGA+TGG 0.427830 5_1:+49125783 Msa0734750:CDS
TCCATTGAATGTAGGAAAGT+TGG 0.445994 5_1:+49126195 Msa0734750:three_prime_UTR
TAGTTGAGGATTGGAAAGTT+GGG 0.447378 5_1:+49125830 Msa0734750:CDS
GTGGGTGGAGGAGGATTTGG+AGG 0.452077 5_1:-49124259 None:intergenic
AGAAGAAACGACGCCGACAT+AGG 0.455999 5_1:-49124670 None:intergenic
AGATAATCAACCCTTTGGTT+CGG 0.456291 5_1:+49125495 Msa0734750:CDS
AGTTGGGTGGAGAGTGGAGA+CGG 0.457769 5_1:+49125846 Msa0734750:CDS
AACGTAGTTCCCTCCGAAGA+AGG 0.458701 5_1:+49124472 Msa0734750:CDS
CACAGTTTACACATGCTTGA+AGG 0.461677 5_1:+49124078 Msa0734750:five_prime_UTR
CTAAGTGGAAAGATATTTGT+GGG 0.463305 5_1:+49125635 Msa0734750:CDS
GCTTGCATAGGTTCATCATT+GGG 0.465865 5_1:-49124327 None:intergenic
TTCATTGTAGTATCTTCTAA+GGG 0.470604 5_1:+49126109 Msa0734750:three_prime_UTR
TTTCTTGGTAATATATTACA+TGG 0.470876 5_1:+49126039 Msa0734750:CDS
TGCCAAAGTGCAGTTGCAAA+TGG 0.473909 5_1:+49125988 Msa0734750:CDS
ATGTAATATATTACCAAGAA+AGG 0.476400 5_1:-49126037 None:intergenic
CCATTCTTCTGTGACTATGA+AGG 0.477696 5_1:-49124383 None:intergenic
TATGCATCAACACTCTCAAT+TGG 0.478373 5_1:-49125687 None:intergenic
AAGATATTTGTGGGGATAAG+GGG 0.481885 5_1:+49125644 Msa0734750:CDS
ACGTGAGTGGTGGGTGGAGG+AGG 0.483465 5_1:-49124268 None:intergenic
TTGGAAAGTTGGGTGGAGAG+TGG 0.485928 5_1:+49125840 Msa0734750:CDS
TTACAAGAGTTGCGAATAAG+AGG 0.487308 5_1:+49124623 Msa0734750:CDS
GAATCAAGTAGTTTCTCAAA+TGG 0.489984 5_1:-49124550 None:intergenic
ATTTGGAGGTTCCATGGAGA+TGG 0.495591 5_1:-49124245 None:intergenic
ACTACGTGAGTGGTGGGTGG+AGG 0.499536 5_1:-49124271 None:intergenic
GTAAGTATATAGTTGAGGAT+TGG 0.500681 5_1:+49125821 Msa0734750:CDS
AGGAGGATTTGGAGGTTCCA+TGG 0.502238 5_1:-49124251 None:intergenic
ATGTGGCCGCGACCTGGGTA+TGG 0.506573 5_1:-49124301 None:intergenic
ATTATTGGAGAGGTAAGAAA+AGG 0.507093 5_1:-49125778 None:intergenic
TATTGTGCTTTCTTCATCCA+TGG 0.508332 5_1:-49125301 None:intergenic
CATTAGTATGTCTCTAATGA+AGG 0.508748 5_1:-49124045 None:intergenic
ACTATATACTTACTATTCAA+AGG 0.508938 5_1:-49125811 None:intergenic
AAATTTAGTCCATTGAATGT+AGG 0.512146 5_1:+49126187 Msa0734750:three_prime_UTR
GAGCTAATTCTAACAATCTA+CGG 0.512987 5_1:-49125267 None:intergenic
CTGATTAAATATTTCAGAGA+TGG 0.513150 5_1:+49126296 Msa0734750:three_prime_UTR
TCTAAGTGGAAAGATATTTG+TGG 0.514263 5_1:+49125634 Msa0734750:CDS
AGACGAATTGATGTGTTCCC+CGG 0.515037 5_1:-49125208 None:intergenic
AAAGACTACACTGCTGGAAG+TGG 0.517002 5_1:-49124102 None:intergenic
CTTAGAAGATACTACAATGA+AGG 0.520998 5_1:-49126107 None:intergenic
TATACTTACTATTCAAAGGT+TGG 0.524591 5_1:-49125807 None:intergenic
ATCAAGTTCAACATCTTGGT+TGG 0.524790 5_1:-49125458 None:intergenic
CTTAAAACATCAATTGCTTG+AGG 0.525457 5_1:-49125355 None:intergenic
GTGTTGATGCATAGTGCTAT+AGG 0.529886 5_1:+49125697 Msa0734750:CDS
GATAGAAAAGACTACACTGC+TGG 0.536403 5_1:-49124108 None:intergenic
CCTTCATAGTCACAGAAGAA+TGG 0.537564 5_1:+49124383 Msa0734750:CDS
GGTTGATGTGGCCGCGACCT+GGG 0.543493 5_1:-49124306 None:intergenic
GGGTGGAATTCAACTAGAGA+AGG 0.545369 5_1:+49125739 Msa0734750:CDS
CAGATCAATGAAATTGCGAA+TGG 0.550048 5_1:+49125562 Msa0734750:CDS
GGGAACTACGTTTGGAATGG+TGG 0.550077 5_1:-49124461 None:intergenic
TACTAATGAATCAAATTGAA+AGG 0.555271 5_1:-49126239 None:intergenic
TAAGAAGAGATGAAATTGCT+AGG 0.556457 5_1:+49125890 Msa0734750:CDS
GAATAGTAAGTATATAGTTG+AGG 0.557074 5_1:+49125816 Msa0734750:CDS
GCCGTGACTAAAATAAGGTA+TGG 0.560100 5_1:-49125416 None:intergenic
CAAAGTGCAGTTGCAAATGG+AGG 0.563559 5_1:+49125991 Msa0734750:CDS
TTGCCTCGACCTTCTTCGGA+GGG 0.564321 5_1:-49124481 None:intergenic
GCGAATGGTTTGGGCGAAAG+TGG 0.568767 5_1:+49125577 Msa0734750:CDS
TTGAGGATTGGAAAGTTGGG+TGG 0.569689 5_1:+49125833 Msa0734750:CDS
AGGTTCCATGGAGATGGAAA+TGG 0.571832 5_1:-49124239 None:intergenic
GGCTCAAGTTCATATATGGA+AGG 0.573714 5_1:-49125334 None:intergenic
AATCACCATTTCCATCTCCA+TGG 0.576819 5_1:+49124234 Msa0734750:exon
GGTTCATCATTGGGTTGATG+TGG 0.578474 5_1:-49124318 None:intergenic
ACATATAGAACCGAACCAAA+GGG 0.578895 5_1:-49125505 None:intergenic
GGAGGGAACTACGTTTGGAA+TGG 0.580154 5_1:-49124464 None:intergenic
GACATATAGAACCGAACCAA+AGG 0.580458 5_1:-49125506 None:intergenic
ATCTTGGTTGGTGCTTAGAG+AGG 0.584062 5_1:-49125446 None:intergenic
CTATCATGTATAATCACACT+CGG 0.585298 5_1:-49124586 None:intergenic
GTTCCCTCCGAAGAAGGTCG+AGG 0.594862 5_1:+49124478 Msa0734750:CDS
GCCGCGACCTGGGTATGGTA+CGG 0.595928 5_1:-49124296 None:intergenic
TGGTGCTTAGAGAGGCACTT+TGG 0.597056 5_1:-49125438 None:intergenic
TTTGCCTCGACCTTCTTCGG+AGG 0.601667 5_1:-49124482 None:intergenic
TTGGTCCATCATTATTGGAG+AGG 0.607037 5_1:-49125788 None:intergenic
TAGCTCTGAATAACATACCA+TGG 0.609800 5_1:+49125284 Msa0734750:CDS
TGGGTGGAGAGTGGAGACGG+AGG 0.613549 5_1:+49125849 Msa0734750:CDS
GCCGTACCATACCCAGGTCG+CGG 0.613664 5_1:+49124295 Msa0734750:CDS
TACGGCTACTACGTGAGTGG+TGG 0.618240 5_1:-49124278 None:intergenic
AACGTGTGTGAATGCATGGT+GGG 0.618691 5_1:+49124000 Msa0734750:five_prime_UTR
TCGGTTCTATATGTCTCACA+AGG 0.619598 5_1:+49125514 Msa0734750:CDS
TGGAGATTAAGAGCTTGCAT+AGG 0.622718 5_1:-49124339 None:intergenic
GCTCAAGTTCATATATGGAA+GGG 0.622979 5_1:-49125333 None:intergenic
AAAGTGCAGTTGCAAATGGA+GGG 0.623483 5_1:+49125992 Msa0734750:CDS
AACGTGTGGATTACATTCCG+GGG 0.625241 5_1:+49125191 Msa0734750:CDS
GGATTTGGGTGATGAAGTGA+AGG 0.625760 5_1:+49125930 Msa0734750:CDS
TGCGTGGAGAAAGTTCTAAG+TGG 0.625771 5_1:+49125620 Msa0734750:CDS
GTGATGAAGTGAAGGAAATG+AGG 0.630372 5_1:+49125938 Msa0734750:CDS
TGGAAACGTGTGTGAATGCA+TGG 0.631198 5_1:+49123996 Msa0734750:five_prime_UTR
ACGGCTACTACGTGAGTGGT+GGG 0.632053 5_1:-49124277 None:intergenic
ACTAACCTGAAGCATTTACT+GGG 0.632218 5_1:-49124735 None:intergenic
TGAAGGTTATGAAAATGTTG+AGG 0.642161 5_1:-49124366 None:intergenic
TCATTGTAGTATCTTCTAAG+GGG 0.650289 5_1:+49126110 Msa0734750:three_prime_UTR
AGAAGTTGGTGACAAACGTG+TGG 0.670943 5_1:+49125177 Msa0734750:intron
GCTACTACGTGAGTGGTGGG+TGG 0.675528 5_1:-49124274 None:intergenic
TGGTACGGCTACTACGTGAG+TGG 0.683850 5_1:-49124281 None:intergenic
ACTCTCAATTGGTCACACCA+TGG 0.684804 5_1:-49125676 None:intergenic
AGATTCTTGTGGATAATGCG+TGG 0.687664 5_1:+49125604 Msa0734750:CDS
TAAGTGGAAAGATATTTGTG+GGG 0.693286 5_1:+49125636 Msa0734750:CDS
TTGATGCATAGTGCTATAGG+TGG 0.705531 5_1:+49125700 Msa0734750:CDS
GTAGTAGCCGTACCATACCC+AGG 0.710129 5_1:+49124289 Msa0734750:CDS
AAACGTGTGTGAATGCATGG+TGG 0.711112 5_1:+49123999 Msa0734750:five_prime_UTR
CGGTTCTATATGTCTCACAA+GGG 0.713829 5_1:+49125515 Msa0734750:CDS
AAAGTGGTGTAAGATTCTTG+TGG 0.721801 5_1:+49125593 Msa0734750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTATTTATGTGTTTTTA+TGG + chr5_1:49124798-49124817 Msa0734750:intron 10.0%
!!! ATTTATTTATGTGTTTTTAT+GGG + chr5_1:49124799-49124818 Msa0734750:intron 10.0%
!!! TCTTATTTTTAATTTTGTAT+GGG + chr5_1:49125042-49125061 Msa0734750:intron 10.0%
!!! TTATTATCATAGTTTTTTTT+AGG - chr5_1:49125100-49125119 None:intergenic 10.0%
!!! TATTTATTTATGTGTTTTTA+TGG + chr5_1:49124798-49124817 Msa0734750:intron 10.0%
!!! ATTTATTTATGTGTTTTTAT+GGG + chr5_1:49124799-49124818 Msa0734750:intron 10.0%
!!! TCTTATTTTTAATTTTGTAT+GGG + chr5_1:49125042-49125061 Msa0734750:intron 10.0%
!!! TTATTATCATAGTTTTTTTT+AGG - chr5_1:49125100-49125119 None:intergenic 10.0%
!!! TACTGTTTTTACTAAATTTA+AGG + chr5_1:49124763-49124782 Msa0734750:intron 15.0%
!! CATTCTTAAACTATAATTAA+TGG - chr5_1:49124928-49124947 None:intergenic 15.0%
!! CATTAATTATAGTTTAAGAA+TGG + chr5_1:49124926-49124945 Msa0734750:intron 15.0%
!!! GTCTTATTTTTAATTTTGTA+TGG + chr5_1:49125041-49125060 Msa0734750:intron 15.0%
!! TTGAACTTGATTATATAAAT+TGG + chr5_1:49125470-49125489 Msa0734750:CDS 15.0%
!!! TACTGTTTTTACTAAATTTA+AGG + chr5_1:49124763-49124782 Msa0734750:intron 15.0%
!! CATTCTTAAACTATAATTAA+TGG - chr5_1:49124928-49124947 None:intergenic 15.0%
!! CATTAATTATAGTTTAAGAA+TGG + chr5_1:49124926-49124945 Msa0734750:intron 15.0%
!!! GTCTTATTTTTAATTTTGTA+TGG + chr5_1:49125041-49125060 Msa0734750:intron 15.0%
!! TTGAACTTGATTATATAAAT+TGG + chr5_1:49125470-49125489 Msa0734750:CDS 15.0%
!!! TTTTGTTGTTTGTTTTTGTA+GGG - chr5_1:49124429-49124448 None:intergenic 20.0%
!!! TTTTTGTTGTTTGTTTTTGT+AGG - chr5_1:49124430-49124449 None:intergenic 20.0%
!!! TACATGATAGTTATTTGTTT+TGG + chr5_1:49124599-49124618 Msa0734750:CDS 20.0%
!!! ACATGATAGTTATTTGTTTT+GGG + chr5_1:49124600-49124619 Msa0734750:CDS 20.0%
!! GATAAACTCAAAAAAATAGA+TGG + chr5_1:49124873-49124892 Msa0734750:intron 20.0%
!! TCTTAAACTATAATTAATGG+TGG - chr5_1:49124925-49124944 None:intergenic 20.0%
!! ACTATATACTTACTATTCAA+AGG - chr5_1:49125814-49125833 None:intergenic 20.0%
!!! AAAGGCTTTCATATTATTTT+CGG - chr5_1:49126022-49126041 None:intergenic 20.0%
!! ATGTAATATATTACCAAGAA+AGG - chr5_1:49126040-49126059 None:intergenic 20.0%
!!! TTTCTTGGTAATATATTACA+TGG + chr5_1:49126039-49126058 Msa0734750:CDS 20.0%
!! TACTAATGAATCAAATTGAA+AGG - chr5_1:49126242-49126261 None:intergenic 20.0%
!!! AGTAACACATTTTTAATGAA+AGG + chr5_1:49126258-49126277 Msa0734750:three_prime_UTR 20.0%
!!! TTTTGTTGTTTGTTTTTGTA+GGG - chr5_1:49124429-49124448 None:intergenic 20.0%
!!! TTTTTGTTGTTTGTTTTTGT+AGG - chr5_1:49124430-49124449 None:intergenic 20.0%
!!! TACATGATAGTTATTTGTTT+TGG + chr5_1:49124599-49124618 Msa0734750:CDS 20.0%
!!! ACATGATAGTTATTTGTTTT+GGG + chr5_1:49124600-49124619 Msa0734750:CDS 20.0%
!! GATAAACTCAAAAAAATAGA+TGG + chr5_1:49124873-49124892 Msa0734750:intron 20.0%
!! TCTTAAACTATAATTAATGG+TGG - chr5_1:49124925-49124944 None:intergenic 20.0%
!! ACTATATACTTACTATTCAA+AGG - chr5_1:49125814-49125833 None:intergenic 20.0%
!!! AAAGGCTTTCATATTATTTT+CGG - chr5_1:49126022-49126041 None:intergenic 20.0%
!! ATGTAATATATTACCAAGAA+AGG - chr5_1:49126040-49126059 None:intergenic 20.0%
!!! TTTCTTGGTAATATATTACA+TGG + chr5_1:49126039-49126058 Msa0734750:CDS 20.0%
!! TACTAATGAATCAAATTGAA+AGG - chr5_1:49126242-49126261 None:intergenic 20.0%
!!! AGTAACACATTTTTAATGAA+AGG + chr5_1:49126258-49126277 Msa0734750:three_prime_UTR 20.0%
!!! AGTGAAAGATAATGGAATTA+TGG - chr5_1:49124209-49124228 None:intergenic 25.0%
!! TCTTAAACATTTTCGTCTTT+TGG + chr5_1:49124696-49124715 Msa0734750:CDS 25.0%
! AATAGATGAAGTTTGCAATT+TGG + chr5_1:49124845-49124864 Msa0734750:intron 25.0%
! AACTCAAAAAAATAGATGGT+TGG + chr5_1:49124877-49124896 Msa0734750:intron 25.0%
! AAACTATAATTAATGGTGGT+GGG - chr5_1:49124921-49124940 None:intergenic 25.0%
! TAAACTATAATTAATGGTGG+TGG - chr5_1:49124922-49124941 None:intergenic 25.0%
! TCTATACCAATTTACACAAT+TGG + chr5_1:49125388-49125407 Msa0734750:CDS 25.0%
! TATAATCAAGTTCAACATCT+TGG - chr5_1:49125465-49125484 None:intergenic 25.0%
! TATACTTACTATTCAAAGGT+TGG - chr5_1:49125810-49125829 None:intergenic 25.0%
! GAATAGTAAGTATATAGTTG+AGG + chr5_1:49125816-49125835 Msa0734750:CDS 25.0%
! TGTTAGAAGATTTATGGATT+TGG + chr5_1:49125915-49125934 Msa0734750:CDS 25.0%
! GTTAGAAGATTTATGGATTT+GGG + chr5_1:49125916-49125935 Msa0734750:CDS 25.0%
! AATAATATGAAAGCCTTTCT+TGG + chr5_1:49126024-49126043 Msa0734750:CDS 25.0%
! TATATCTTACTCTTACTCTA+TGG - chr5_1:49126072-49126091 None:intergenic 25.0%
! TTCATTGTAGTATCTTCTAA+GGG + chr5_1:49126109-49126128 Msa0734750:three_prime_UTR 25.0%
! AAATTTAGTCCATTGAATGT+AGG + chr5_1:49126187-49126206 Msa0734750:three_prime_UTR 25.0%
! CTGATTAAATATTTCAGAGA+TGG + chr5_1:49126296-49126315 Msa0734750:three_prime_UTR 25.0%
!!! AGTGAAAGATAATGGAATTA+TGG - chr5_1:49124209-49124228 None:intergenic 25.0%
!! TCTTAAACATTTTCGTCTTT+TGG + chr5_1:49124696-49124715 Msa0734750:CDS 25.0%
! AATAGATGAAGTTTGCAATT+TGG + chr5_1:49124845-49124864 Msa0734750:intron 25.0%
! AACTCAAAAAAATAGATGGT+TGG + chr5_1:49124877-49124896 Msa0734750:intron 25.0%
! AAACTATAATTAATGGTGGT+GGG - chr5_1:49124921-49124940 None:intergenic 25.0%
! TAAACTATAATTAATGGTGG+TGG - chr5_1:49124922-49124941 None:intergenic 25.0%
! TCTATACCAATTTACACAAT+TGG + chr5_1:49125388-49125407 Msa0734750:CDS 25.0%
! TATAATCAAGTTCAACATCT+TGG - chr5_1:49125465-49125484 None:intergenic 25.0%
! TATACTTACTATTCAAAGGT+TGG - chr5_1:49125810-49125829 None:intergenic 25.0%
! GAATAGTAAGTATATAGTTG+AGG + chr5_1:49125816-49125835 Msa0734750:CDS 25.0%
! TGTTAGAAGATTTATGGATT+TGG + chr5_1:49125915-49125934 Msa0734750:CDS 25.0%
! GTTAGAAGATTTATGGATTT+GGG + chr5_1:49125916-49125935 Msa0734750:CDS 25.0%
! AATAATATGAAAGCCTTTCT+TGG + chr5_1:49126024-49126043 Msa0734750:CDS 25.0%
! TATATCTTACTCTTACTCTA+TGG - chr5_1:49126072-49126091 None:intergenic 25.0%
! TTCATTGTAGTATCTTCTAA+GGG + chr5_1:49126109-49126128 Msa0734750:three_prime_UTR 25.0%
! AAATTTAGTCCATTGAATGT+AGG + chr5_1:49126187-49126206 Msa0734750:three_prime_UTR 25.0%
! CTGATTAAATATTTCAGAGA+TGG + chr5_1:49126296-49126315 Msa0734750:three_prime_UTR 25.0%
CATTAGTATGTCTCTAATGA+AGG - chr5_1:49124048-49124067 None:intergenic 30.0%
ATTTGGAGAGTGAAAGATAA+TGG - chr5_1:49124217-49124236 None:intergenic 30.0%
TATGAAAATGTTGAGGTTGT+TGG - chr5_1:49124362-49124381 None:intergenic 30.0%
TGAAGGTTATGAAAATGTTG+AGG - chr5_1:49124369-49124388 None:intergenic 30.0%
GAATCAAGTAGTTTCTCAAA+TGG - chr5_1:49124553-49124572 None:intergenic 30.0%
CTATCATGTATAATCACACT+CGG - chr5_1:49124589-49124608 None:intergenic 30.0%
!! TTTCGTCTTTTGGAGAAAAA+TGG + chr5_1:49124706-49124725 Msa0734750:CDS 30.0%
ACTTCATCTATTGTACCAAA+TGG - chr5_1:49124837-49124856 None:intergenic 30.0%
TTAGAGAGAGTTATAGCTTA+TGG + chr5_1:49124951-49124970 Msa0734750:intron 30.0%
TAGAGAGAGTTATAGCTTAT+GGG + chr5_1:49124952-49124971 Msa0734750:intron 30.0%
ACGAAAAGCAAATATACATC+AGG - chr5_1:49125001-49125020 None:intergenic 30.0%
TTTCGTGTATTTATCAGTTG+AGG + chr5_1:49125015-49125034 Msa0734750:intron 30.0%
TAAATTGTTGCAACAGAAGT+TGG + chr5_1:49125163-49125182 Msa0734750:intron 30.0%
GAGCTAATTCTAACAATCTA+CGG - chr5_1:49125270-49125289 None:intergenic 30.0%
CTTAAAACATCAATTGCTTG+AGG - chr5_1:49125358-49125377 None:intergenic 30.0%
GTAGTTCCAATTGTGTAAAT+TGG - chr5_1:49125397-49125416 None:intergenic 30.0%
!!! ACCATACCTTATTTTAGTCA+CGG + chr5_1:49125415-49125434 Msa0734750:CDS 30.0%
AATGAAATTGCGAATGGTTT+GGG + chr5_1:49125568-49125587 Msa0734750:CDS 30.0%
TCTAAGTGGAAAGATATTTG+TGG + chr5_1:49125634-49125653 Msa0734750:CDS 30.0%
CTAAGTGGAAAGATATTTGT+GGG + chr5_1:49125635-49125654 Msa0734750:CDS 30.0%
TAAGTGGAAAGATATTTGTG+GGG + chr5_1:49125636-49125655 Msa0734750:CDS 30.0%
AAAGATATTTGTGGGGATAA+GGG + chr5_1:49125643-49125662 Msa0734750:CDS 30.0%
ATTATTGGAGAGGTAAGAAA+AGG - chr5_1:49125781-49125800 None:intergenic 30.0%
GTAAGTATATAGTTGAGGAT+TGG + chr5_1:49125821-49125840 Msa0734750:CDS 30.0%
TAAGAAGAGATGAAATTGCT+AGG + chr5_1:49125890-49125909 Msa0734750:CDS 30.0%
!! TAGGCTTGTTAGAAGATTTA+TGG + chr5_1:49125909-49125928 Msa0734750:CDS 30.0%
CTTAGAAGATACTACAATGA+AGG - chr5_1:49126110-49126129 None:intergenic 30.0%
CTTCATTGTAGTATCTTCTA+AGG + chr5_1:49126108-49126127 Msa0734750:three_prime_UTR 30.0%
TCATTGTAGTATCTTCTAAG+GGG + chr5_1:49126110-49126129 Msa0734750:three_prime_UTR 30.0%
!! CATTCAATGGACTAAATTTC+AGG - chr5_1:49126186-49126205 None:intergenic 30.0%
CATTAGTATGTCTCTAATGA+AGG - chr5_1:49124048-49124067 None:intergenic 30.0%
ATTTGGAGAGTGAAAGATAA+TGG - chr5_1:49124217-49124236 None:intergenic 30.0%
TATGAAAATGTTGAGGTTGT+TGG - chr5_1:49124362-49124381 None:intergenic 30.0%
TGAAGGTTATGAAAATGTTG+AGG - chr5_1:49124369-49124388 None:intergenic 30.0%
GAATCAAGTAGTTTCTCAAA+TGG - chr5_1:49124553-49124572 None:intergenic 30.0%
CTATCATGTATAATCACACT+CGG - chr5_1:49124589-49124608 None:intergenic 30.0%
!! TTTCGTCTTTTGGAGAAAAA+TGG + chr5_1:49124706-49124725 Msa0734750:CDS 30.0%
ACTTCATCTATTGTACCAAA+TGG - chr5_1:49124837-49124856 None:intergenic 30.0%
TTAGAGAGAGTTATAGCTTA+TGG + chr5_1:49124951-49124970 Msa0734750:intron 30.0%
TAGAGAGAGTTATAGCTTAT+GGG + chr5_1:49124952-49124971 Msa0734750:intron 30.0%
ACGAAAAGCAAATATACATC+AGG - chr5_1:49125001-49125020 None:intergenic 30.0%
TTTCGTGTATTTATCAGTTG+AGG + chr5_1:49125015-49125034 Msa0734750:intron 30.0%
TAAATTGTTGCAACAGAAGT+TGG + chr5_1:49125163-49125182 Msa0734750:intron 30.0%
GAGCTAATTCTAACAATCTA+CGG - chr5_1:49125270-49125289 None:intergenic 30.0%
CTTAAAACATCAATTGCTTG+AGG - chr5_1:49125358-49125377 None:intergenic 30.0%
GTAGTTCCAATTGTGTAAAT+TGG - chr5_1:49125397-49125416 None:intergenic 30.0%
!!! ACCATACCTTATTTTAGTCA+CGG + chr5_1:49125415-49125434 Msa0734750:CDS 30.0%
AATGAAATTGCGAATGGTTT+GGG + chr5_1:49125568-49125587 Msa0734750:CDS 30.0%
TCTAAGTGGAAAGATATTTG+TGG + chr5_1:49125634-49125653 Msa0734750:CDS 30.0%
CTAAGTGGAAAGATATTTGT+GGG + chr5_1:49125635-49125654 Msa0734750:CDS 30.0%
TAAGTGGAAAGATATTTGTG+GGG + chr5_1:49125636-49125655 Msa0734750:CDS 30.0%
AAAGATATTTGTGGGGATAA+GGG + chr5_1:49125643-49125662 Msa0734750:CDS 30.0%
ATTATTGGAGAGGTAAGAAA+AGG - chr5_1:49125781-49125800 None:intergenic 30.0%
GTAAGTATATAGTTGAGGAT+TGG + chr5_1:49125821-49125840 Msa0734750:CDS 30.0%
TAAGAAGAGATGAAATTGCT+AGG + chr5_1:49125890-49125909 Msa0734750:CDS 30.0%
!! TAGGCTTGTTAGAAGATTTA+TGG + chr5_1:49125909-49125928 Msa0734750:CDS 30.0%
CTTAGAAGATACTACAATGA+AGG - chr5_1:49126110-49126129 None:intergenic 30.0%
CTTCATTGTAGTATCTTCTA+AGG + chr5_1:49126108-49126127 Msa0734750:three_prime_UTR 30.0%
TCATTGTAGTATCTTCTAAG+GGG + chr5_1:49126110-49126129 Msa0734750:three_prime_UTR 30.0%
!! CATTCAATGGACTAAATTTC+AGG - chr5_1:49126186-49126205 None:intergenic 30.0%
!!! GTTGTTTGTTTTTGTAGGGT+CGG - chr5_1:49124425-49124444 None:intergenic 35.0%
TGAAGCTGTTGCTACTAAAA+TGG + chr5_1:49124522-49124541 Msa0734750:CDS 35.0%
TTACAAGAGTTGCGAATAAG+AGG + chr5_1:49124623-49124642 Msa0734750:CDS 35.0%
! ACTAACCTGAAGCATTTACT+GGG - chr5_1:49124738-49124757 None:intergenic 35.0%
! AACTAACCTGAAGCATTTAC+TGG - chr5_1:49124739-49124758 None:intergenic 35.0%
ATCTATTGTACCAAATGGAG+AGG - chr5_1:49124832-49124851 None:intergenic 35.0%
GTGTATTTATCAGTTGAGGT+TGG + chr5_1:49125019-49125038 Msa0734750:intron 35.0%
CATCGTGAAGTTGAAAATCT+TGG - chr5_1:49125234-49125253 None:intergenic 35.0%
!! TAGCTCTGAATAACATACCA+TGG + chr5_1:49125284-49125303 Msa0734750:CDS 35.0%
TATTGTGCTTTCTTCATCCA+TGG - chr5_1:49125304-49125323 None:intergenic 35.0%
GCTCAAGTTCATATATGGAA+GGG - chr5_1:49125336-49125355 None:intergenic 35.0%
TTGAGGCTCAAGTTCATATA+TGG - chr5_1:49125341-49125360 None:intergenic 35.0%
ATCAAGTTCAACATCTTGGT+TGG - chr5_1:49125461-49125480 None:intergenic 35.0%
AGATAATCAACCCTTTGGTT+CGG + chr5_1:49125495-49125514 Msa0734750:CDS 35.0%
ACATATAGAACCGAACCAAA+GGG - chr5_1:49125508-49125527 None:intergenic 35.0%
CAGATCAATGAAATTGCGAA+TGG + chr5_1:49125562-49125581 Msa0734750:CDS 35.0%
CAATGAAATTGCGAATGGTT+TGG + chr5_1:49125567-49125586 Msa0734750:CDS 35.0%
AAAGTGGTGTAAGATTCTTG+TGG + chr5_1:49125593-49125612 Msa0734750:CDS 35.0%
GAAAGATATTTGTGGGGATA+AGG + chr5_1:49125642-49125661 Msa0734750:CDS 35.0%
AAGATATTTGTGGGGATAAG+GGG + chr5_1:49125644-49125663 Msa0734750:CDS 35.0%
TATGCATCAACACTCTCAAT+TGG - chr5_1:49125690-49125709 None:intergenic 35.0%
! ATAGTGCTATAGGTGGTTTT+TGG + chr5_1:49125707-49125726 Msa0734750:CDS 35.0%
!!! ACTAGAGAAGGTTTGTTTTG+TGG + chr5_1:49125751-49125770 Msa0734750:CDS 35.0%
TCTTACCTCTCCAATAATGA+TGG + chr5_1:49125783-49125802 Msa0734750:CDS 35.0%
! AAAGGTTGGTCCATCATTAT+TGG - chr5_1:49125796-49125815 None:intergenic 35.0%
ATAGTTGAGGATTGGAAAGT+TGG + chr5_1:49125829-49125848 Msa0734750:CDS 35.0%
TAGTTGAGGATTGGAAAGTT+GGG + chr5_1:49125830-49125849 Msa0734750:CDS 35.0%
TCCATTGAATGTAGGAAAGT+TGG + chr5_1:49126195-49126214 Msa0734750:three_prime_UTR 35.0%
ACCAACTTTCCTACATTCAA+TGG - chr5_1:49126199-49126218 None:intergenic 35.0%
!!! GTTGTTTGTTTTTGTAGGGT+CGG - chr5_1:49124425-49124444 None:intergenic 35.0%
TGAAGCTGTTGCTACTAAAA+TGG + chr5_1:49124522-49124541 Msa0734750:CDS 35.0%
TTACAAGAGTTGCGAATAAG+AGG + chr5_1:49124623-49124642 Msa0734750:CDS 35.0%
! ACTAACCTGAAGCATTTACT+GGG - chr5_1:49124738-49124757 None:intergenic 35.0%
! AACTAACCTGAAGCATTTAC+TGG - chr5_1:49124739-49124758 None:intergenic 35.0%
ATCTATTGTACCAAATGGAG+AGG - chr5_1:49124832-49124851 None:intergenic 35.0%
GTGTATTTATCAGTTGAGGT+TGG + chr5_1:49125019-49125038 Msa0734750:intron 35.0%
CATCGTGAAGTTGAAAATCT+TGG - chr5_1:49125234-49125253 None:intergenic 35.0%
!! TAGCTCTGAATAACATACCA+TGG + chr5_1:49125284-49125303 Msa0734750:CDS 35.0%
TATTGTGCTTTCTTCATCCA+TGG - chr5_1:49125304-49125323 None:intergenic 35.0%
GCTCAAGTTCATATATGGAA+GGG - chr5_1:49125336-49125355 None:intergenic 35.0%
TTGAGGCTCAAGTTCATATA+TGG - chr5_1:49125341-49125360 None:intergenic 35.0%
ATCAAGTTCAACATCTTGGT+TGG - chr5_1:49125461-49125480 None:intergenic 35.0%
AGATAATCAACCCTTTGGTT+CGG + chr5_1:49125495-49125514 Msa0734750:CDS 35.0%
ACATATAGAACCGAACCAAA+GGG - chr5_1:49125508-49125527 None:intergenic 35.0%
CAGATCAATGAAATTGCGAA+TGG + chr5_1:49125562-49125581 Msa0734750:CDS 35.0%
CAATGAAATTGCGAATGGTT+TGG + chr5_1:49125567-49125586 Msa0734750:CDS 35.0%
AAAGTGGTGTAAGATTCTTG+TGG + chr5_1:49125593-49125612 Msa0734750:CDS 35.0%
GAAAGATATTTGTGGGGATA+AGG + chr5_1:49125642-49125661 Msa0734750:CDS 35.0%
AAGATATTTGTGGGGATAAG+GGG + chr5_1:49125644-49125663 Msa0734750:CDS 35.0%
TATGCATCAACACTCTCAAT+TGG - chr5_1:49125690-49125709 None:intergenic 35.0%
! ATAGTGCTATAGGTGGTTTT+TGG + chr5_1:49125707-49125726 Msa0734750:CDS 35.0%
!!! ACTAGAGAAGGTTTGTTTTG+TGG + chr5_1:49125751-49125770 Msa0734750:CDS 35.0%
TCTTACCTCTCCAATAATGA+TGG + chr5_1:49125783-49125802 Msa0734750:CDS 35.0%
! AAAGGTTGGTCCATCATTAT+TGG - chr5_1:49125796-49125815 None:intergenic 35.0%
ATAGTTGAGGATTGGAAAGT+TGG + chr5_1:49125829-49125848 Msa0734750:CDS 35.0%
TAGTTGAGGATTGGAAAGTT+GGG + chr5_1:49125830-49125849 Msa0734750:CDS 35.0%
TCCATTGAATGTAGGAAAGT+TGG + chr5_1:49126195-49126214 Msa0734750:three_prime_UTR 35.0%
ACCAACTTTCCTACATTCAA+TGG - chr5_1:49126199-49126218 None:intergenic 35.0%
CACAGTTTACACATGCTTGA+AGG + chr5_1:49124078-49124097 Msa0734750:five_prime_UTR 40.0%
GATAGAAAAGACTACACTGC+TGG - chr5_1:49124111-49124130 None:intergenic 40.0%
TGGAGATGGAAATGGTGATT+TGG - chr5_1:49124234-49124253 None:intergenic 40.0%
AATCACCATTTCCATCTCCA+TGG + chr5_1:49124234-49124253 Msa0734750:exon 40.0%
GCTTGCATAGGTTCATCATT+GGG - chr5_1:49124330-49124349 None:intergenic 40.0%
AGCTTGCATAGGTTCATCAT+TGG - chr5_1:49124331-49124350 None:intergenic 40.0%
TGGAGATTAAGAGCTTGCAT+AGG - chr5_1:49124342-49124361 None:intergenic 40.0%
CCATTCTTCTGTGACTATGA+AGG - chr5_1:49124386-49124405 None:intergenic 40.0%
CCTTCATAGTCACAGAAGAA+TGG + chr5_1:49124383-49124402 Msa0734750:CDS 40.0%
! ATGTTCATGTTGCGTCGTTT+TGG + chr5_1:49124647-49124666 Msa0734750:CDS 40.0%
GATTACCCAGTAAATGCTTC+AGG + chr5_1:49124730-49124749 Msa0734750:CDS 40.0%
! CAAACGTGTGGATTACATTC+CGG + chr5_1:49125189-49125208 Msa0734750:CDS 40.0%
! AAACGTGTGGATTACATTCC+GGG + chr5_1:49125190-49125209 Msa0734750:CDS 40.0%
GGCTCAAGTTCATATATGGA+AGG - chr5_1:49125337-49125356 None:intergenic 40.0%
GCCGTGACTAAAATAAGGTA+TGG - chr5_1:49125419-49125438 None:intergenic 40.0%
CTTTGGCCGTGACTAAAATA+AGG - chr5_1:49125424-49125443 None:intergenic 40.0%
TGGCTAGATAATCAACCCTT+TGG + chr5_1:49125490-49125509 Msa0734750:CDS 40.0%
GACATATAGAACCGAACCAA+AGG - chr5_1:49125509-49125528 None:intergenic 40.0%
TCGGTTCTATATGTCTCACA+AGG + chr5_1:49125514-49125533 Msa0734750:CDS 40.0%
CGGTTCTATATGTCTCACAA+GGG + chr5_1:49125515-49125534 Msa0734750:CDS 40.0%
! CTCACAAGGGAGTTTTCTTT+CGG + chr5_1:49125528-49125547 Msa0734750:CDS 40.0%
AGATTCTTGTGGATAATGCG+TGG + chr5_1:49125604-49125623 Msa0734750:CDS 40.0%
!!! ATAAGGGGTTTGTTTTGCCA+TGG + chr5_1:49125659-49125678 Msa0734750:CDS 40.0%
! GTGTTGATGCATAGTGCTAT+AGG + chr5_1:49125697-49125716 Msa0734750:CDS 40.0%
TTGATGCATAGTGCTATAGG+TGG + chr5_1:49125700-49125719 Msa0734750:CDS 40.0%
!!! GTGGTTTTTGGTCACATTGT+GGG + chr5_1:49125719-49125738 Msa0734750:CDS 40.0%
TTGGTCCATCATTATTGGAG+AGG - chr5_1:49125791-49125810 None:intergenic 40.0%
GTGATGAAGTGAAGGAAATG+AGG + chr5_1:49125938-49125957 Msa0734750:CDS 40.0%
AAAGTGCAGTTGCAAATGGA+GGG + chr5_1:49125992-49126011 Msa0734750:CDS 40.0%
CACAGTTTACACATGCTTGA+AGG + chr5_1:49124078-49124097 Msa0734750:five_prime_UTR 40.0%
GATAGAAAAGACTACACTGC+TGG - chr5_1:49124111-49124130 None:intergenic 40.0%
TGGAGATGGAAATGGTGATT+TGG - chr5_1:49124234-49124253 None:intergenic 40.0%
AATCACCATTTCCATCTCCA+TGG + chr5_1:49124234-49124253 Msa0734750:exon 40.0%
GCTTGCATAGGTTCATCATT+GGG - chr5_1:49124330-49124349 None:intergenic 40.0%
AGCTTGCATAGGTTCATCAT+TGG - chr5_1:49124331-49124350 None:intergenic 40.0%
TGGAGATTAAGAGCTTGCAT+AGG - chr5_1:49124342-49124361 None:intergenic 40.0%
CCATTCTTCTGTGACTATGA+AGG - chr5_1:49124386-49124405 None:intergenic 40.0%
CCTTCATAGTCACAGAAGAA+TGG + chr5_1:49124383-49124402 Msa0734750:CDS 40.0%
! ATGTTCATGTTGCGTCGTTT+TGG + chr5_1:49124647-49124666 Msa0734750:CDS 40.0%
GATTACCCAGTAAATGCTTC+AGG + chr5_1:49124730-49124749 Msa0734750:CDS 40.0%
! CAAACGTGTGGATTACATTC+CGG + chr5_1:49125189-49125208 Msa0734750:CDS 40.0%
! AAACGTGTGGATTACATTCC+GGG + chr5_1:49125190-49125209 Msa0734750:CDS 40.0%
GGCTCAAGTTCATATATGGA+AGG - chr5_1:49125337-49125356 None:intergenic 40.0%
GCCGTGACTAAAATAAGGTA+TGG - chr5_1:49125419-49125438 None:intergenic 40.0%
CTTTGGCCGTGACTAAAATA+AGG - chr5_1:49125424-49125443 None:intergenic 40.0%
TGGCTAGATAATCAACCCTT+TGG + chr5_1:49125490-49125509 Msa0734750:CDS 40.0%
GACATATAGAACCGAACCAA+AGG - chr5_1:49125509-49125528 None:intergenic 40.0%
TCGGTTCTATATGTCTCACA+AGG + chr5_1:49125514-49125533 Msa0734750:CDS 40.0%
CGGTTCTATATGTCTCACAA+GGG + chr5_1:49125515-49125534 Msa0734750:CDS 40.0%
! CTCACAAGGGAGTTTTCTTT+CGG + chr5_1:49125528-49125547 Msa0734750:CDS 40.0%
AGATTCTTGTGGATAATGCG+TGG + chr5_1:49125604-49125623 Msa0734750:CDS 40.0%
!!! ATAAGGGGTTTGTTTTGCCA+TGG + chr5_1:49125659-49125678 Msa0734750:CDS 40.0%
! GTGTTGATGCATAGTGCTAT+AGG + chr5_1:49125697-49125716 Msa0734750:CDS 40.0%
TTGATGCATAGTGCTATAGG+TGG + chr5_1:49125700-49125719 Msa0734750:CDS 40.0%
!!! GTGGTTTTTGGTCACATTGT+GGG + chr5_1:49125719-49125738 Msa0734750:CDS 40.0%
TTGGTCCATCATTATTGGAG+AGG - chr5_1:49125791-49125810 None:intergenic 40.0%
GTGATGAAGTGAAGGAAATG+AGG + chr5_1:49125938-49125957 Msa0734750:CDS 40.0%
AAAGTGCAGTTGCAAATGGA+GGG + chr5_1:49125992-49126011 Msa0734750:CDS 40.0%
TGGAAACGTGTGTGAATGCA+TGG + chr5_1:49123996-49124015 Msa0734750:five_prime_UTR 45.0%
AAACGTGTGTGAATGCATGG+TGG + chr5_1:49123999-49124018 Msa0734750:five_prime_UTR 45.0%
AACGTGTGTGAATGCATGGT+GGG + chr5_1:49124000-49124019 Msa0734750:five_prime_UTR 45.0%
AAAGACTACACTGCTGGAAG+TGG - chr5_1:49124105-49124124 None:intergenic 45.0%
AGGTTCCATGGAGATGGAAA+TGG - chr5_1:49124242-49124261 None:intergenic 45.0%
ATTTGGAGGTTCCATGGAGA+TGG - chr5_1:49124248-49124267 None:intergenic 45.0%
!! GGTTCATCATTGGGTTGATG+TGG - chr5_1:49124321-49124340 None:intergenic 45.0%
ATCTTTGCCTCGACCTTCTT+CGG - chr5_1:49124488-49124507 None:intergenic 45.0%
GGGTTAAGATCCTCTCCATT+TGG + chr5_1:49124819-49124838 Msa0734750:intron 45.0%
!! AGAAGTTGGTGACAAACGTG+TGG + chr5_1:49125177-49125196 Msa0734750:intron 45.0%
! AACGTGTGGATTACATTCCG+GGG + chr5_1:49125191-49125210 Msa0734750:CDS 45.0%
AGACGAATTGATGTGTTCCC+CGG - chr5_1:49125211-49125230 None:intergenic 45.0%
! ATCTTGGTTGGTGCTTAGAG+AGG - chr5_1:49125449-49125468 None:intergenic 45.0%
!! TGCGTGGAGAAAGTTCTAAG+TGG + chr5_1:49125620-49125639 Msa0734750:CDS 45.0%
ACTCTCAATTGGTCACACCA+TGG - chr5_1:49125679-49125698 None:intergenic 45.0%
!!! GGTGGTTTTTGGTCACATTG+TGG + chr5_1:49125718-49125737 Msa0734750:CDS 45.0%
!!! GTTTTTGGTCACATTGTGGG+TGG + chr5_1:49125722-49125741 Msa0734750:CDS 45.0%
GGGTGGAATTCAACTAGAGA+AGG + chr5_1:49125739-49125758 Msa0734750:CDS 45.0%
TTGAGGATTGGAAAGTTGGG+TGG + chr5_1:49125833-49125852 Msa0734750:CDS 45.0%
GGATTTGGGTGATGAAGTGA+AGG + chr5_1:49125930-49125949 Msa0734750:CDS 45.0%
TGCCAAAGTGCAGTTGCAAA+TGG + chr5_1:49125988-49126007 Msa0734750:CDS 45.0%
CTCCATTTGCAACTGCACTT+TGG - chr5_1:49125993-49126012 None:intergenic 45.0%
CAAAGTGCAGTTGCAAATGG+AGG + chr5_1:49125991-49126010 Msa0734750:CDS 45.0%
TGGAAACGTGTGTGAATGCA+TGG + chr5_1:49123996-49124015 Msa0734750:five_prime_UTR 45.0%
AAACGTGTGTGAATGCATGG+TGG + chr5_1:49123999-49124018 Msa0734750:five_prime_UTR 45.0%
AACGTGTGTGAATGCATGGT+GGG + chr5_1:49124000-49124019 Msa0734750:five_prime_UTR 45.0%
AAAGACTACACTGCTGGAAG+TGG - chr5_1:49124105-49124124 None:intergenic 45.0%
AGGTTCCATGGAGATGGAAA+TGG - chr5_1:49124242-49124261 None:intergenic 45.0%
ATTTGGAGGTTCCATGGAGA+TGG - chr5_1:49124248-49124267 None:intergenic 45.0%
!! GGTTCATCATTGGGTTGATG+TGG - chr5_1:49124321-49124340 None:intergenic 45.0%
ATCTTTGCCTCGACCTTCTT+CGG - chr5_1:49124488-49124507 None:intergenic 45.0%
GGGTTAAGATCCTCTCCATT+TGG + chr5_1:49124819-49124838 Msa0734750:intron 45.0%
!! AGAAGTTGGTGACAAACGTG+TGG + chr5_1:49125177-49125196 Msa0734750:intron 45.0%
! AACGTGTGGATTACATTCCG+GGG + chr5_1:49125191-49125210 Msa0734750:CDS 45.0%
AGACGAATTGATGTGTTCCC+CGG - chr5_1:49125211-49125230 None:intergenic 45.0%
! ATCTTGGTTGGTGCTTAGAG+AGG - chr5_1:49125449-49125468 None:intergenic 45.0%
!! TGCGTGGAGAAAGTTCTAAG+TGG + chr5_1:49125620-49125639 Msa0734750:CDS 45.0%
ACTCTCAATTGGTCACACCA+TGG - chr5_1:49125679-49125698 None:intergenic 45.0%
!!! GGTGGTTTTTGGTCACATTG+TGG + chr5_1:49125718-49125737 Msa0734750:CDS 45.0%
!!! GTTTTTGGTCACATTGTGGG+TGG + chr5_1:49125722-49125741 Msa0734750:CDS 45.0%
GGGTGGAATTCAACTAGAGA+AGG + chr5_1:49125739-49125758 Msa0734750:CDS 45.0%
TTGAGGATTGGAAAGTTGGG+TGG + chr5_1:49125833-49125852 Msa0734750:CDS 45.0%
GGATTTGGGTGATGAAGTGA+AGG + chr5_1:49125930-49125949 Msa0734750:CDS 45.0%
TGCCAAAGTGCAGTTGCAAA+TGG + chr5_1:49125988-49126007 Msa0734750:CDS 45.0%
CTCCATTTGCAACTGCACTT+TGG - chr5_1:49125993-49126012 None:intergenic 45.0%
CAAAGTGCAGTTGCAAATGG+AGG + chr5_1:49125991-49126010 Msa0734750:CDS 45.0%
AGGAGGATTTGGAGGTTCCA+TGG - chr5_1:49124254-49124273 None:intergenic 50.0%
! GGGAACTACGTTTGGAATGG+TGG - chr5_1:49124464-49124483 None:intergenic 50.0%
GGAGGGAACTACGTTTGGAA+TGG - chr5_1:49124467-49124486 None:intergenic 50.0%
TCTTCGGAGGGAACTACGTT+TGG - chr5_1:49124472-49124491 None:intergenic 50.0%
AACGTAGTTCCCTCCGAAGA+AGG + chr5_1:49124472-49124491 Msa0734750:CDS 50.0%
!! TGCGTCGTTTTGGCCTATGT+CGG + chr5_1:49124657-49124676 Msa0734750:CDS 50.0%
AGAAGAAACGACGCCGACAT+AGG - chr5_1:49124673-49124692 None:intergenic 50.0%
! GGTTGGTCCTAGCACTAAGT+AGG + chr5_1:49124894-49124913 Msa0734750:intron 50.0%
!! TGGTGCTTAGAGAGGCACTT+TGG - chr5_1:49125441-49125460 None:intergenic 50.0%
TTGGAAAGTTGGGTGGAGAG+TGG + chr5_1:49125840-49125859 Msa0734750:CDS 50.0%
AGGAGGATTTGGAGGTTCCA+TGG - chr5_1:49124254-49124273 None:intergenic 50.0%
! GGGAACTACGTTTGGAATGG+TGG - chr5_1:49124464-49124483 None:intergenic 50.0%
GGAGGGAACTACGTTTGGAA+TGG - chr5_1:49124467-49124486 None:intergenic 50.0%
TCTTCGGAGGGAACTACGTT+TGG - chr5_1:49124472-49124491 None:intergenic 50.0%
AACGTAGTTCCCTCCGAAGA+AGG + chr5_1:49124472-49124491 Msa0734750:CDS 50.0%
!! TGCGTCGTTTTGGCCTATGT+CGG + chr5_1:49124657-49124676 Msa0734750:CDS 50.0%
AGAAGAAACGACGCCGACAT+AGG - chr5_1:49124673-49124692 None:intergenic 50.0%
! GGTTGGTCCTAGCACTAAGT+AGG + chr5_1:49124894-49124913 Msa0734750:intron 50.0%
!! TGGTGCTTAGAGAGGCACTT+TGG - chr5_1:49125441-49125460 None:intergenic 50.0%
TTGGAAAGTTGGGTGGAGAG+TGG + chr5_1:49125840-49125859 Msa0734750:CDS 50.0%
ACGGCTACTACGTGAGTGGT+GGG - chr5_1:49124280-49124299 None:intergenic 55.0%
TACGGCTACTACGTGAGTGG+TGG - chr5_1:49124281-49124300 None:intergenic 55.0%
TGGTACGGCTACTACGTGAG+TGG - chr5_1:49124284-49124303 None:intergenic 55.0%
GTAGTAGCCGTACCATACCC+AGG + chr5_1:49124289-49124308 Msa0734750:CDS 55.0%
TTGCCTCGACCTTCTTCGGA+GGG - chr5_1:49124484-49124503 None:intergenic 55.0%
TTTGCCTCGACCTTCTTCGG+AGG - chr5_1:49124485-49124504 None:intergenic 55.0%
GGTGGGACCTACTTAGTGCT+AGG - chr5_1:49124904-49124923 None:intergenic 55.0%
! GCGAATGGTTTGGGCGAAAG+TGG + chr5_1:49125577-49125596 Msa0734750:CDS 55.0%
AGTTGGGTGGAGAGTGGAGA+CGG + chr5_1:49125846-49125865 Msa0734750:CDS 55.0%
ACGGCTACTACGTGAGTGGT+GGG - chr5_1:49124280-49124299 None:intergenic 55.0%
TACGGCTACTACGTGAGTGG+TGG - chr5_1:49124281-49124300 None:intergenic 55.0%
TGGTACGGCTACTACGTGAG+TGG - chr5_1:49124284-49124303 None:intergenic 55.0%
GTAGTAGCCGTACCATACCC+AGG + chr5_1:49124289-49124308 Msa0734750:CDS 55.0%
TTGCCTCGACCTTCTTCGGA+GGG - chr5_1:49124484-49124503 None:intergenic 55.0%
TTTGCCTCGACCTTCTTCGG+AGG - chr5_1:49124485-49124504 None:intergenic 55.0%
GGTGGGACCTACTTAGTGCT+AGG - chr5_1:49124904-49124923 None:intergenic 55.0%
! GCGAATGGTTTGGGCGAAAG+TGG + chr5_1:49125577-49125596 Msa0734750:CDS 55.0%
AGTTGGGTGGAGAGTGGAGA+CGG + chr5_1:49125846-49125865 Msa0734750:CDS 55.0%
GTGGGTGGAGGAGGATTTGG+AGG - chr5_1:49124262-49124281 None:intergenic 60.0%
!! GTGGTGGGTGGAGGAGGATT+TGG - chr5_1:49124265-49124284 None:intergenic 60.0%
!! ACTACGTGAGTGGTGGGTGG+AGG - chr5_1:49124274-49124293 None:intergenic 60.0%
! GCTACTACGTGAGTGGTGGG+TGG - chr5_1:49124277-49124296 None:intergenic 60.0%
GTTCCCTCCGAAGAAGGTCG+AGG + chr5_1:49124478-49124497 Msa0734750:CDS 60.0%
GTGGGTGGAGGAGGATTTGG+AGG - chr5_1:49124262-49124281 None:intergenic 60.0%
!! GTGGTGGGTGGAGGAGGATT+TGG - chr5_1:49124265-49124284 None:intergenic 60.0%
!! ACTACGTGAGTGGTGGGTGG+AGG - chr5_1:49124274-49124293 None:intergenic 60.0%
! GCTACTACGTGAGTGGTGGG+TGG - chr5_1:49124277-49124296 None:intergenic 60.0%
GTTCCCTCCGAAGAAGGTCG+AGG + chr5_1:49124478-49124497 Msa0734750:CDS 60.0%
!! ACGTGAGTGGTGGGTGGAGG+AGG - chr5_1:49124271-49124290 None:intergenic 65.0%
GCCGTACCATACCCAGGTCG+CGG + chr5_1:49124295-49124314 Msa0734750:CDS 65.0%
GCCGCGACCTGGGTATGGTA+CGG - chr5_1:49124299-49124318 None:intergenic 65.0%
ATGTGGCCGCGACCTGGGTA+TGG - chr5_1:49124304-49124323 None:intergenic 65.0%
! GGTTGATGTGGCCGCGACCT+GGG - chr5_1:49124309-49124328 None:intergenic 65.0%
TGGGTGGAGAGTGGAGACGG+AGG + chr5_1:49125849-49125868 Msa0734750:CDS 65.0%
!! ACGTGAGTGGTGGGTGGAGG+AGG - chr5_1:49124271-49124290 None:intergenic 65.0%
GCCGTACCATACCCAGGTCG+CGG + chr5_1:49124295-49124314 Msa0734750:CDS 65.0%
GCCGCGACCTGGGTATGGTA+CGG - chr5_1:49124299-49124318 None:intergenic 65.0%
ATGTGGCCGCGACCTGGGTA+TGG - chr5_1:49124304-49124323 None:intergenic 65.0%
! GGTTGATGTGGCCGCGACCT+GGG - chr5_1:49124309-49124328 None:intergenic 65.0%
TGGGTGGAGAGTGGAGACGG+AGG + chr5_1:49125849-49125868 Msa0734750:CDS 65.0%
!! GGGTTGATGTGGCCGCGACC+TGG - chr5_1:49124310-49124329 None:intergenic 70.0%
!! GGGTTGATGTGGCCGCGACC+TGG - chr5_1:49124310-49124329 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 49123989 49126366 49123989 ID=Msa0734750;Name=Msa0734750
chr5_1 mRNA 49123989 49126366 49123989 ID=Msa0734750-mRNA-1;Parent=Msa0734750;Name=Msa0734750-mRNA-1;_AED=0.32;_eAED=0.32;_QI=264|1|1|1|1|1|2|292|464
chr5_1 exon 49123989 49124751 49123989 ID=Msa0734750-mRNA-1:exon:14005;Parent=Msa0734750-mRNA-1
chr5_1 exon 49125179 49126366 49125179 ID=Msa0734750-mRNA-1:exon:14006;Parent=Msa0734750-mRNA-1
chr5_1 five_prime_UTR 49123989 49124252 49123989 ID=Msa0734750-mRNA-1:five_prime_utr;Parent=Msa0734750-mRNA-1
chr5_1 CDS 49124253 49124751 49124253 ID=Msa0734750-mRNA-1:cds;Parent=Msa0734750-mRNA-1
chr5_1 CDS 49125179 49126074 49125179 ID=Msa0734750-mRNA-1:cds;Parent=Msa0734750-mRNA-1
chr5_1 three_prime_UTR 49126075 49126366 49126075 ID=Msa0734750-mRNA-1:three_prime_utr;Parent=Msa0734750-mRNA-1
Gene Sequence

>Msa0734750

ATGGAACCTCCAAATCCTCCTCCACCCACCACTCACGTAGTAGCCGTACCATACCCAGGTCGCGGCCACATCAACCCAATGATGAACCTATGCAAGCTCTTAATCTCCAACAACCTCAACATTTTCATAACCTTCATAGTCACAGAAGAATGGTTCACTCTCATCAACTCCGACCCTACAAAAACAAACAACAAAAACATCAAATTTGCCACCATTCCAAACGTAGTTCCCTCCGAAGAAGGTCGAGGCAAAGATTTTCTTAATTTTTTTGAAGCTGTTGCTACTAAAATGGAAGAGCCATTTGAGAAACTACTTGATTCTTTTGAGACAGTGCCGAGTGTGATTATACATGATAGTTATTTGTTTTGGGTTACAAGAGTTGCGAATAAGAGGAATGTTCATGTTGCGTCGTTTTGGCCTATGTCGGCGTCGTTTCTTCTTGTTCTTAAACATTTTCGTCTTTTGGAGAAAAATGGTGATTACCCAGTAAATGCTTCAGAAGTTGGTGACAAACGTGTGGATTACATTCCGGGGAACACATCAATTCGTCTCCAAGATTTTCAACTTCACGATGCAAACTTACGCATCCGTAGATTGTTAGAATTAGCTCTGAATAACATACCATGGATGAAGAAAGCACAATATCTATTATTCCCTTCCATATATGAACTTGAGCCTCAAGCAATTGATGTTTTAAGAGAAGAATTTTCTATACCAATTTACACAATTGGAACTACCATACCTTATTTTAGTCACGGCCAAAGTGCCTCTCTAAGCACCAACCAAGATGTTGAACTTGATTATATAAATTGGCTAGATAATCAACCCTTTGGTTCGGTTCTATATGTCTCACAAGGGAGTTTTCTTTCGGTTTCAAGCGAACAGATCAATGAAATTGCGAATGGTTTGGGCGAAAGTGGTGTAAGATTCTTGTGGATAATGCGTGGAGAAAGTTCTAAGTGGAAAGATATTTGTGGGGATAAGGGGTTTGTTTTGCCATGGTGTGACCAATTGAGAGTGTTGATGCATAGTGCTATAGGTGGTTTTTGGTCACATTGTGGGTGGAATTCAACTAGAGAAGGTTTGTTTTGTGGTGTGCCTTTTCTTACCTCTCCAATAATGATGGACCAACCTTTGAATAGTAAGTATATAGTTGAGGATTGGAAAGTTGGGTGGAGAGTGGAGACGGAGGTTAAAGATGATGTTTTGATAAGAAGAGATGAAATTGCTAGGCTTGTTAGAAGATTTATGGATTTGGGTGATGAAGTGAAGGAAATGAGGAAAAGAGCAAGAGATCTTCAACAAATATGCCAAAGTGCAGTTGCAAATGGAGGGTCATCCGAAAATAATATGAAAGCCTTTCTTGGTAATATATTACATGGATTCAAACCATAG
Protein sequence

>Msa0734750

MEPPNPPPPTTHVVAVPYPGRGHINPMMNLCKLLISNNLNIFITFIVTEEWFTLINSDPTKTNNKNIKFATIPNVVPSEEGRGKDFLNFFEAVATKMEEPFEKLLDSFETVPSVIIHDSYLFWVTRVANKRNVHVASFWPMSASFLLVLKHFRLLEKNGDYPVNASEVGDKRVDYIPGNTSIRLQDFQLHDANLRIRRLLELALNNIPWMKKAQYLLFPSIYELEPQAIDVLREEFSIPIYTIGTTIPYFSHGQSASLSTNQDVELDYINWLDNQPFGSVLYVSQGSFLSVSSEQINEIANGLGESGVRFLWIMRGESSKWKDICGDKGFVLPWCDQLRVLMHSAIGGFWSHCGWNSTREGLFCGVPFLTSPIMMDQPLNSKYIVEDWKVGWRVETEVKDDVLIRRDEIARLVRRFMDLGDEVKEMRKRARDLQQICQSAVANGGSSENNMKAFLGNILHGFKP*