Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193070 | XP_003628734.2 | 97.619 | 294 | 7 | 0 | 1 | 294 | 1 | 294 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193070 | sp|Q4R599|TSNAX_MACFA | 36.709 | 237 | 122 | 7 | 60 | 275 | 39 | 268 | 7.88e-41 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025730 | Msa1193070 | 0.803387 | 3.571274e-49 | -8.615850e-47 |
| Msa0027260 | Msa1193070 | 0.833390 | 5.482104e-56 | -8.615850e-47 |
| Msa0030430 | Msa1193070 | 0.808947 | 2.411491e-50 | -8.615850e-47 |
| Msa0032580 | Msa1193070 | 0.806588 | 7.646346e-50 | -8.615850e-47 |
| Msa0040690 | Msa1193070 | 0.836147 | 1.109344e-56 | -8.615850e-47 |
| Msa0043660 | Msa1193070 | 0.833192 | 6.140629e-56 | -8.615850e-47 |
| Msa0061080 | Msa1193070 | 0.807295 | 5.420776e-50 | -8.615850e-47 |
| Msa0074320 | Msa1193070 | 0.824061 | 9.897561e-54 | -8.615850e-47 |
| Msa0080200 | Msa1193070 | 0.810613 | 1.056332e-50 | -8.615850e-47 |
| Msa0091570 | Msa1193070 | 0.804202 | 2.419448e-49 | -8.615850e-47 |
| Msa0094470 | Msa1193070 | 0.805639 | 1.211572e-49 | -8.615850e-47 |
| Msa0100740 | Msa1193070 | 0.805942 | 1.045980e-49 | -8.615850e-47 |
| Msa0608320 | Msa1193070 | 0.827583 | 1.443973e-54 | -8.615850e-47 |
| Msa0615710 | Msa1193070 | 0.819573 | 1.081892e-52 | -8.615850e-47 |
| Msa0616240 | Msa1193070 | 0.804145 | 2.486070e-49 | -8.615850e-47 |
| Msa0621950 | Msa1193070 | 0.809999 | 1.433710e-50 | -8.615850e-47 |
| Msa0650020 | Msa1193070 | 0.801947 | 7.080948e-49 | -8.615850e-47 |
| Msa0677290 | Msa1193070 | 0.832008 | 1.208021e-55 | -8.615850e-47 |
| Msa0699570 | Msa1193070 | 0.804399 | 2.201196e-49 | -8.615850e-47 |
| Msa0734750 | Msa1193070 | 0.802523 | 5.389550e-49 | -8.615850e-47 |
| Msa0738630 | Msa1193070 | -0.801251 | 9.834083e-49 | -8.615850e-47 |
| Msa0763070 | Msa1193070 | 0.800992 | 1.110759e-48 | -8.615850e-47 |
| Msa0783760 | Msa1193070 | -0.804700 | 1.904877e-49 | -8.615850e-47 |
| Msa0790850 | Msa1193070 | 0.806400 | 8.377487e-50 | -8.615850e-47 |
| Msa0813720 | Msa1193070 | 0.806293 | 8.827347e-50 | -8.615850e-47 |
| Msa0813740 | Msa1193070 | 0.820887 | 5.409522e-53 | -8.615850e-47 |
| Msa0818980 | Msa1193070 | -0.807412 | 5.118017e-50 | -8.615850e-47 |
| Msa0819030 | Msa1193070 | -0.817340 | 3.470038e-52 | -8.615850e-47 |
| Msa0128860 | Msa1193070 | 0.806617 | 7.539763e-50 | -8.615850e-47 |
| Msa0137550 | Msa1193070 | 0.842802 | 2.070265e-58 | -8.615850e-47 |
| Msa0140570 | Msa1193070 | 0.816288 | 5.975424e-52 | -8.615850e-47 |
| Msa0160550 | Msa1193070 | 0.806098 | 9.699550e-50 | -8.615850e-47 |
| Msa0165660 | Msa1193070 | 0.821922 | 3.120687e-53 | -8.615850e-47 |
| Msa0172970 | Msa1193070 | 0.801078 | 1.066970e-48 | -8.615850e-47 |
| Msa0173820 | Msa1193070 | 0.805969 | 1.032536e-49 | -8.615850e-47 |
| Msa0173830 | Msa1193070 | 0.807990 | 3.857843e-50 | -8.615850e-47 |
| Msa0174730 | Msa1193070 | 0.806690 | 7.277556e-50 | -8.615850e-47 |
| Msa0187690 | Msa1193070 | 0.827306 | 1.682614e-54 | -8.615850e-47 |
| Msa0187930 | Msa1193070 | 0.815797 | 7.689713e-52 | -8.615850e-47 |
| Msa0193120 | Msa1193070 | 0.811308 | 7.470862e-51 | -8.615850e-47 |
| Msa0194540 | Msa1193070 | 0.817148 | 3.832174e-52 | -8.615850e-47 |
| Msa0199880 | Msa1193070 | 0.802440 | 5.605399e-49 | -8.615850e-47 |
| Msa0220720 | Msa1193070 | 0.825264 | 5.153684e-54 | -8.615850e-47 |
| Msa0369220 | Msa1193070 | 0.822310 | 2.536332e-53 | -8.615850e-47 |
| Msa0385580 | Msa1193070 | 0.808688 | 2.739455e-50 | -8.615850e-47 |
| Msa0395960 | Msa1193070 | 0.823169 | 1.600875e-53 | -8.615850e-47 |
| Msa0402650 | Msa1193070 | 0.843219 | 1.603073e-58 | -8.615850e-47 |
| Msa0443500 | Msa1193070 | 0.833831 | 4.253476e-56 | -8.615850e-47 |
| Msa0449210 | Msa1193070 | 0.824806 | 6.612781e-54 | -8.615850e-47 |
| Msa1013400 | Msa1193070 | 0.832313 | 1.014904e-55 | -8.615850e-47 |
| Msa1014500 | Msa1193070 | 0.835050 | 2.102274e-56 | -8.615850e-47 |
| Msa1019240 | Msa1193070 | 0.801376 | 9.269881e-49 | -8.615850e-47 |
| Msa1019260 | Msa1193070 | 0.807407 | 5.132203e-50 | -8.615850e-47 |
| Msa1043690 | Msa1193070 | 0.806488 | 8.028904e-50 | -8.615850e-47 |
| Msa1051200 | Msa1193070 | 0.802168 | 6.375255e-49 | -8.615850e-47 |
| Msa1081150 | Msa1193070 | 0.801965 | 7.019678e-49 | -8.615850e-47 |
| Msa1084470 | Msa1193070 | 0.809382 | 1.944789e-50 | -8.615850e-47 |
| Msa1093530 | Msa1193070 | 0.830510 | 2.819661e-55 | -8.615850e-47 |
| Msa1104140 | Msa1193070 | 0.839635 | 1.408635e-57 | -8.615850e-47 |
| Msa1104210 | Msa1193070 | 0.815858 | 7.451567e-52 | -8.615850e-47 |
| Msa1106700 | Msa1193070 | 0.837268 | 5.746638e-57 | -8.615850e-47 |
| Msa0244780 | Msa1193070 | 0.818500 | 1.897293e-52 | -8.615850e-47 |
| Msa0262050 | Msa1193070 | 0.809549 | 1.790856e-50 | -8.615850e-47 |
| Msa0262310 | Msa1193070 | 0.806084 | 9.766853e-50 | -8.615850e-47 |
| Msa0264570 | Msa1193070 | 0.800867 | 1.178003e-48 | -8.615850e-47 |
| Msa0268130 | Msa1193070 | 0.823910 | 1.073837e-53 | -8.615850e-47 |
| Msa0280610 | Msa1193070 | 0.806756 | 7.047062e-50 | -8.615850e-47 |
| Msa0298990 | Msa1193070 | 0.826028 | 3.396499e-54 | -8.615850e-47 |
| Msa0299870 | Msa1193070 | 0.811496 | 6.801812e-51 | -8.615850e-47 |
| Msa0337240 | Msa1193070 | 0.819543 | 1.099017e-52 | -8.615850e-47 |
| Msa0337650 | Msa1193070 | 0.805886 | 1.075197e-49 | -8.615850e-47 |
| Msa0349060 | Msa1193070 | 0.814764 | 1.304793e-51 | -8.615850e-47 |
| Msa0358170 | Msa1193070 | 0.804809 | 1.807649e-49 | -8.615850e-47 |
| Msa1126510 | Msa1193070 | 0.821155 | 4.691940e-53 | -8.615850e-47 |
| Msa1137700 | Msa1193070 | 0.815073 | 1.114411e-51 | -8.615850e-47 |
| Msa1166860 | Msa1193070 | 0.825975 | 3.496867e-54 | -8.615850e-47 |
| Msa1171360 | Msa1193070 | 0.801546 | 8.555180e-49 | -8.615850e-47 |
| Msa1193070 | Msa1201650 | 0.826071 | 3.317360e-54 | -8.615850e-47 |
| Msa1193070 | Msa1218600 | 0.806322 | 8.703865e-50 | -8.615850e-47 |
| Msa1193070 | Msa1225700 | 0.825239 | 5.222892e-54 | -8.615850e-47 |
| Msa1193070 | Msa1251020 | 0.832663 | 8.313871e-56 | -8.615850e-47 |
| Msa1193070 | Msa1254610 | 0.819105 | 1.383277e-52 | -8.615850e-47 |
| Msa1193070 | Msa1257510 | 0.809701 | 1.661387e-50 | -8.615850e-47 |
| Msa1193070 | Msa1275430 | 0.800441 | 1.439356e-48 | -8.615850e-47 |
| Msa1193070 | Msa1358250 | 0.801852 | 7.405486e-49 | -8.615850e-47 |
| Msa1193070 | Msa1363330 | 0.811697 | 6.149387e-51 | -8.615850e-47 |
| Msa1193070 | Msa1374120 | 0.811781 | 5.896660e-51 | -8.615850e-47 |
| Msa1193070 | Msa1379760 | 0.811570 | 6.553837e-51 | -8.615850e-47 |
| Msa1193070 | Msa1386600 | 0.811300 | 7.499643e-51 | -8.615850e-47 |
| Msa1193070 | Msa1394290 | 0.812194 | 4.793980e-51 | -8.615850e-47 |
| Msa1193070 | Msa1396000 | 0.811371 | 7.239849e-51 | -8.615850e-47 |
| Msa1193070 | Msa1417870 | 0.813669 | 2.276787e-51 | -8.615850e-47 |
| Msa1193070 | Msa1432700 | 0.813356 | 2.667781e-51 | -8.615850e-47 |
| Msa1193070 | Msa1448690 | 0.826840 | 2.174833e-54 | -8.615850e-47 |
| Msa1193070 | Msa1457920 | 0.800169 | 1.634855e-48 | -8.615850e-47 |
| Msa0497490 | Msa1193070 | 0.841548 | 4.443835e-58 | -8.615850e-47 |
| Msa0501760 | Msa1193070 | 0.801082 | 1.064783e-48 | -8.615850e-47 |
| Msa0508870 | Msa1193070 | 0.807293 | 5.425897e-50 | -8.615850e-47 |
| Msa0520070 | Msa1193070 | 0.800156 | 1.644647e-48 | -8.615850e-47 |
| Msa0526540 | Msa1193070 | 0.807787 | 4.262581e-50 | -8.615850e-47 |
| Msa0576940 | Msa1193070 | 0.811468 | 6.897095e-51 | -8.615850e-47 |
| Msa0902760 | Msa1193070 | 0.831833 | 1.333679e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193070 | MtrunA17_Chr8g0366151 | 97.619 | 294 | 7 | 0 | 1 | 294 | 1 | 294 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193070 | AT2G03780.1 | 69.831 | 295 | 79 | 3 | 1 | 293 | 1 | 287 | 6.26e-151 | 424 |
| Msa1193070 | AT2G03780.3 | 76.955 | 243 | 56 | 0 | 51 | 293 | 2 | 244 | 6.90e-143 | 402 |
| Msa1193070 | AT2G03780.2 | 77.665 | 197 | 44 | 0 | 97 | 293 | 6 | 202 | 5.55e-114 | 327 |
Find 71 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAGATATTCGGTATATT+TGG | 0.219366 | 8_1:-39255468 | None:intergenic |
| ATCAGAGTATATACCACTTT+TGG | 0.223331 | 8_1:+39258858 | Msa1193070:CDS |
| AACATCCTTGACTATCTATT+AGG | 0.234815 | 8_1:+39257875 | Msa1193070:CDS |
| TTGGTCTCTTTGTTGTGTTC+TGG | 0.256767 | 8_1:-39255382 | None:intergenic |
| TATTCGGTATATTTGGTAAA+AGG | 0.273813 | 8_1:-39255461 | None:intergenic |
| ACATCCTTGACTATCTATTA+GGG | 0.277012 | 8_1:+39257876 | Msa1193070:CDS |
| TACAAGGTTATTGAGATATT+CGG | 0.335811 | 8_1:-39255477 | None:intergenic |
| TATAAAATAAATGTTTAATA+TGG | 0.338564 | 8_1:-39259319 | None:intergenic |
| CTTTGTTGTGTTCTGGAAGT+TGG | 0.340035 | 8_1:-39255375 | None:intergenic |
| GAGAGATTTACATACTTTGA+TGG | 0.347696 | 8_1:-39255263 | None:intergenic |
| ATACCTCATAGTTCAATATC+TGG | 0.349942 | 8_1:-39258916 | None:intergenic |
| GCTTTGCACGTGATATATAT+AGG | 0.370536 | 8_1:+39258218 | Msa1193070:CDS |
| ATGTAGATGAGTGATATTTA+CGG | 0.376408 | 8_1:+39259056 | Msa1193070:three_prime_UTR |
| TCGACTAGTCAAAGAATTGC+AGG | 0.386016 | 8_1:+39257605 | Msa1193070:CDS |
| CTTTGAGATTAAAGAAACTT+TGG | 0.386544 | 8_1:+39259169 | Msa1193070:three_prime_UTR |
| TGTATTTGTAGAATGATAAA+CGG | 0.403793 | 8_1:+39257034 | Msa1193070:intron |
| GAGCTGATGCGTTTGGCTAT+TGG | 0.405037 | 8_1:+39258151 | Msa1193070:CDS |
| TACACTCGTCGTGCCACATA+TGG | 0.408301 | 8_1:+39258246 | Msa1193070:CDS |
| GACCGGAGAGCTGATGCGTT+TGG | 0.425505 | 8_1:+39258144 | Msa1193070:CDS |
| ATCTTGTACAGGTCATCAAT+TGG | 0.434729 | 8_1:+39259017 | Msa1193070:intron |
| TGACATGTAGACAGATTTAA+CGG | 0.438654 | 8_1:+39259279 | Msa1193070:three_prime_UTR |
| TGATCCAAGTTCTTTCTTAG+TGG | 0.448490 | 8_1:+39258888 | Msa1193070:CDS |
| CAAAGTTTCTTTAATCTCAA+AGG | 0.456485 | 8_1:-39259168 | None:intergenic |
| TATAACAATGAATAGCAAAA+AGG | 0.457983 | 8_1:+39257083 | Msa1193070:CDS |
| CTTTGCACGTGATATATATA+GGG | 0.471371 | 8_1:+39258219 | Msa1193070:CDS |
| CTTCGTGAAGATGACATGTA+TGG | 0.471413 | 8_1:+39259084 | Msa1193070:three_prime_UTR |
| GATCCAAGTTCTTTCTTAGT+GGG | 0.475255 | 8_1:+39258889 | Msa1193070:CDS |
| CTACATGTCAAAACAAGGCT+TGG | 0.480513 | 8_1:-39259266 | None:intergenic |
| TCTGTGAAGTGAAGATGAAA+AGG | 0.484008 | 8_1:-39255202 | None:intergenic |
| AGTACTTGAGAAAGCAGAAA+AGG | 0.487405 | 8_1:+39257551 | Msa1193070:CDS |
| TGCCACTGATTCTGCTATGA+AGG | 0.492267 | 8_1:+39255436 | Msa1193070:CDS |
| TCCTAGGACACCTAAACCCC+TGG | 0.495462 | 8_1:-39255157 | None:intergenic |
| CCATCATAAACCACTTCTAA+AGG | 0.495553 | 8_1:-39259390 | None:intergenic |
| AGCCAAACGCATCAGCTCTC+CGG | 0.501275 | 8_1:-39258146 | None:intergenic |
| ACCAGGGGTTTAGGTGTCCT+AGG | 0.505182 | 8_1:+39255156 | Msa1193070:five_prime_UTR |
| AGGTCATATTTCAAGTGCAC+AGG | 0.506446 | 8_1:+39257103 | Msa1193070:CDS |
| TTCTGATATGAAAACAAAGA+TGG | 0.507798 | 8_1:+39258276 | Msa1193070:CDS |
| GACATGTAGACAGATTTAAC+GGG | 0.510807 | 8_1:+39259280 | Msa1193070:three_prime_UTR |
| CTAAGACGAGCCTACTCACC+CGG | 0.512679 | 8_1:+39257645 | Msa1193070:CDS |
| GTATTTGTAGAATGATAAAC+GGG | 0.514201 | 8_1:+39257035 | Msa1193070:intron |
| TGCTTTAGTGTTCATGTCAG+AGG | 0.516215 | 8_1:+39258835 | Msa1193070:CDS |
| ACTCCCACTAAGAAAGAACT+TGG | 0.522033 | 8_1:-39258892 | None:intergenic |
| TTTCATGACACTTTGGAGCA+TGG | 0.523941 | 8_1:-39258302 | None:intergenic |
| ACATCTGTTCAGTTCCTCCT+AGG | 0.528980 | 8_1:-39255173 | None:intergenic |
| GGATCATTTGATCCCAAAAG+TGG | 0.531182 | 8_1:-39258871 | None:intergenic |
| TTACAGCTTGCAGATTTGAC+CGG | 0.531970 | 8_1:+39258127 | Msa1193070:intron |
| ATCTGCAGAGGCTGAAGAGA+AGG | 0.540287 | 8_1:-39257851 | None:intergenic |
| AGTGTCATGAAAATAGAGAA+TGG | 0.543198 | 8_1:+39258313 | Msa1193070:CDS |
| AAATATAACTATGCTACCAT+AGG | 0.543508 | 8_1:+39259197 | Msa1193070:three_prime_UTR |
| AAAGTATACCCCGGGTGAGT+AGG | 0.551350 | 8_1:-39257655 | None:intergenic |
| TGTTTAATATGGCTGATCCA+TGG | 0.562282 | 8_1:-39259308 | None:intergenic |
| GTACAAGGCTGATTCTAGCT+AGG | 0.563848 | 8_1:+39259363 | Msa1193070:three_prime_UTR |
| GTTCCAGATATTGAACTATG+AGG | 0.571700 | 8_1:+39258913 | Msa1193070:CDS |
| CATAGCAGAATCAGTGGCAG+TGG | 0.579726 | 8_1:-39255432 | None:intergenic |
| AGTGGCAGTGTCAGTAGCAA+TGG | 0.585370 | 8_1:-39255414 | None:intergenic |
| TCAGAACTGTCATCCATATG+TGG | 0.587378 | 8_1:-39258259 | None:intergenic |
| GCTAGGACCACCTTTAGAAG+TGG | 0.592426 | 8_1:+39259380 | Msa1193070:three_prime_UTR |
| TGATGCGTTTGGCTATTGGT+AGG | 0.594582 | 8_1:+39258155 | Msa1193070:CDS |
| TCAAGGATGTTTATCTGCAG+AGG | 0.603539 | 8_1:-39257863 | None:intergenic |
| GCTATTGGTAGGATATCAGA+TGG | 0.607525 | 8_1:+39258166 | Msa1193070:CDS |
| TTCCTTCATAGCAGAATCAG+TGG | 0.623318 | 8_1:-39255438 | None:intergenic |
| TCATAAACCACTTCTAAAGG+TGG | 0.634594 | 8_1:-39259387 | None:intergenic |
| AGATTTAACGGGATAAACCA+TGG | 0.637823 | 8_1:+39259291 | Msa1193070:three_prime_UTR |
| TAAGACGAGCCTACTCACCC+GGG | 0.643500 | 8_1:+39257646 | Msa1193070:CDS |
| TCTGTCTACATGTCAAAACA+AGG | 0.650345 | 8_1:-39259271 | None:intergenic |
| CGACTAGTCAAAGAATTGCA+GGG | 0.652001 | 8_1:+39257606 | Msa1193070:CDS |
| CATCCTTGACTATCTATTAG+GGG | 0.657819 | 8_1:+39257877 | Msa1193070:CDS |
| ATACCCCTAATAGATAGTCA+AGG | 0.666089 | 8_1:-39257880 | None:intergenic |
| AGGGGTTTAGGTGTCCTAGG+AGG | 0.720010 | 8_1:+39255159 | Msa1193070:five_prime_UTR |
| AAGACGAGCCTACTCACCCG+GGG | 0.730892 | 8_1:+39257647 | Msa1193070:CDS |
| TGAAGAGAAGGATCACTAAG+CGG | 0.736059 | 8_1:-39257839 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTAATTAATTAT+TGG | + | chr8_1:39255126-39255145 | Msa1193070:five_prime_UTR | 0.0% |
| !!! | TTTATTTTTAATTAATTATT+GGG | + | chr8_1:39255127-39255146 | Msa1193070:five_prime_UTR | 0.0% |
| !!! | TTTTATTACTATTTTTCATT+TGG | + | chr8_1:39255626-39255645 | Msa1193070:intron | 10.0% |
| !!! | TTTATTACTATTTTTCATTT+GGG | + | chr8_1:39255627-39255646 | Msa1193070:intron | 10.0% |
| !!! | TTTTTAAAAAGATTAGAAAA+TGG | - | chr8_1:39257506-39257525 | None:intergenic | 10.0% |
| !!! | ATTTTCTAATCTTTTTAAAA+AGG | + | chr8_1:39257505-39257524 | Msa1193070:intron | 10.0% |
| !!! | TTATTTTATTTTTTCGATTC+TGG | + | chr8_1:39255332-39255351 | Msa1193070:intron | 15.0% |
| !!! | TATTTTATTTTTTCGATTCT+GGG | + | chr8_1:39255333-39255352 | Msa1193070:intron | 15.0% |
| !! | GTAATAAAAATCAAATCTTT+AGG | - | chr8_1:39255615-39255634 | None:intergenic | 15.0% |
| !!! | TTATTACTATTTTTCATTTG+GGG | + | chr8_1:39255628-39255647 | Msa1193070:intron | 15.0% |
| !! | TACAGTAAAATAAAATTTGA+GGG | - | chr8_1:39256740-39256759 | None:intergenic | 15.0% |
| !! | ATACAGTAAAATAAAATTTG+AGG | - | chr8_1:39256741-39256760 | None:intergenic | 15.0% |
| !!! | TTTCATTTTCATATTCAAAA+GGG | - | chr8_1:39257348-39257367 | None:intergenic | 15.0% |
| !!! | ATTTCATTTTCATATTCAAA+AGG | - | chr8_1:39257349-39257368 | None:intergenic | 15.0% |
| !! | AAAAATTCATTAAGATAGAA+AGG | - | chr8_1:39257383-39257402 | None:intergenic | 15.0% |
| !!! | AATTTTTTTTCCATAACAAA+GGG | + | chr8_1:39257396-39257415 | Msa1193070:intron | 15.0% |
| !!! | TAGATATAACATTTTAACAA+GGG | + | chr8_1:39257956-39257975 | Msa1193070:intron | 15.0% |
| !! | TAATATTGAGAACATTTAAA+AGG | - | chr8_1:39258110-39258129 | None:intergenic | 15.0% |
| !!! | CTTCTTATTTTTTGTTTTAA+GGG | + | chr8_1:39258498-39258517 | Msa1193070:intron | 15.0% |
| !! | TTGTATAAAAAAACTCAATA+TGG | + | chr8_1:39258695-39258714 | Msa1193070:intron | 15.0% |
| !!! | TATTACTATTTTTCATTTGG+GGG | + | chr8_1:39255629-39255648 | Msa1193070:intron | 20.0% |
| !!! | AACTGATATTTTACTACATT+CGG | + | chr8_1:39256191-39256210 | Msa1193070:intron | 20.0% |
| !! | ACAGTAAAATAAAATTTGAG+GGG | - | chr8_1:39256739-39256758 | None:intergenic | 20.0% |
| !!! | ATCAAATTTGTTATATGAAG+AGG | - | chr8_1:39256851-39256870 | None:intergenic | 20.0% |
| !!! | CTTAGAAGTATATAGATATT+GGG | + | chr8_1:39256920-39256939 | Msa1193070:intron | 20.0% |
| !! | TGTATTTGTAGAATGATAAA+CGG | + | chr8_1:39257034-39257053 | Msa1193070:intron | 20.0% |
| !! | TATAACAATGAATAGCAAAA+AGG | + | chr8_1:39257083-39257102 | Msa1193070:CDS | 20.0% |
| !! | ATTAAAGAACAAATAAAGCA+TGG | - | chr8_1:39257268-39257287 | None:intergenic | 20.0% |
| !!! | GAATTTTTTTTCCATAACAA+AGG | + | chr8_1:39257395-39257414 | Msa1193070:intron | 20.0% |
| !!! | GTAGATATAACATTTTAACA+AGG | + | chr8_1:39257955-39257974 | Msa1193070:intron | 20.0% |
| !! | AAACAAAAAATAAGAAGGAA+CGG | - | chr8_1:39258495-39258514 | None:intergenic | 20.0% |
| !! | CCTTAAAACAAAAAATAAGA+AGG | - | chr8_1:39258500-39258519 | None:intergenic | 20.0% |
| !!! | CCTTCTTATTTTTTGTTTTA+AGG | + | chr8_1:39258497-39258516 | Msa1193070:intron | 20.0% |
| !! | TTAGAAGTAACAAAATTTAC+TGG | - | chr8_1:39258547-39258566 | None:intergenic | 20.0% |
| !!! | GTAAATTTTGTTACTTCTAA+TGG | + | chr8_1:39258547-39258566 | Msa1193070:intron | 20.0% |
| !! | AATGTTGATATTAATGAGTT+TGG | + | chr8_1:39258670-39258689 | Msa1193070:intron | 20.0% |
| !! | AGTCTATTCATTTATTTGAA+AGG | - | chr8_1:39258991-39259010 | None:intergenic | 20.0% |
| !!! | TAATTATTGGGTTTTAAACC+AGG | + | chr8_1:39255139-39255158 | Msa1193070:five_prime_UTR | 25.0% |
| !!! | AATTATTGGGTTTTAAACCA+GGG | + | chr8_1:39255140-39255159 | Msa1193070:five_prime_UTR | 25.0% |
| ! | TATTCGGTATATTTGGTAAA+AGG | - | chr8_1:39255464-39255483 | None:intergenic | 25.0% |
| ! | ATTGAGATATTCGGTATATT+TGG | - | chr8_1:39255471-39255490 | None:intergenic | 25.0% |
| ! | TACAAGGTTATTGAGATATT+CGG | - | chr8_1:39255480-39255499 | None:intergenic | 25.0% |
| ! | TGAAGATAAGAAACATTACA+AGG | - | chr8_1:39255496-39255515 | None:intergenic | 25.0% |
| !!! | ATTACTATTTTTCATTTGGG+GGG | + | chr8_1:39255630-39255649 | Msa1193070:intron | 25.0% |
| ! | AGAAATGGTTATTCTCATTT+AGG | + | chr8_1:39255674-39255693 | Msa1193070:intron | 25.0% |
| ! | AAATAGACTCTTAGCTAAAA+GGG | - | chr8_1:39255705-39255724 | None:intergenic | 25.0% |
| ! | TAAATAGACTCTTAGCTAAA+AGG | - | chr8_1:39255706-39255725 | None:intergenic | 25.0% |
| !!! | TTTTAGCTAAGAGTCTATTT+AGG | + | chr8_1:39255705-39255724 | Msa1193070:intron | 25.0% |
| ! | ATAAGTTGTTTGTCCAAATA+TGG | - | chr8_1:39255781-39255800 | None:intergenic | 25.0% |
| !!! | TTGTTTTTATAAGCTGCTTT+GGG | + | chr8_1:39255848-39255867 | Msa1193070:intron | 25.0% |
| ! | TCAATTAAGTTAATCCAAAC+AGG | + | chr8_1:39256095-39256114 | Msa1193070:intron | 25.0% |
| ! | AACACACAATTTAGTACAAA+GGG | - | chr8_1:39256121-39256140 | None:intergenic | 25.0% |
| ! | TCAATCCTAACAAATTACTA+GGG | - | chr8_1:39256401-39256420 | None:intergenic | 25.0% |
| ! | ACTTAGGAAAAATTGAAAGA+TGG | + | chr8_1:39256545-39256564 | Msa1193070:intron | 25.0% |
| !! | TAACTGTTGATTAGTGTATA+TGG | + | chr8_1:39256569-39256588 | Msa1193070:intron | 25.0% |
| ! | TTGATTAGTGTATATGGAAT+GGG | + | chr8_1:39256575-39256594 | Msa1193070:intron | 25.0% |
| !! | TATTGAGATCTTTAACCTTT+TGG | + | chr8_1:39256600-39256619 | Msa1193070:intron | 25.0% |
| ! | ATTATACTAGTCCTTTAGTA+TGG | - | chr8_1:39256675-39256694 | None:intergenic | 25.0% |
| !! | GCTTAGAAGTATATAGATAT+TGG | + | chr8_1:39256919-39256938 | Msa1193070:intron | 25.0% |
| ! | ATATGCAACCATATTGTAAA+GGG | - | chr8_1:39256973-39256992 | None:intergenic | 25.0% |
| ! | GTTTATCATTCTACAAATAC+AGG | - | chr8_1:39257035-39257054 | None:intergenic | 25.0% |
| ! | GTATTTGTAGAATGATAAAC+GGG | + | chr8_1:39257035-39257054 | Msa1193070:intron | 25.0% |
| ! | TTTATCAATTACACTTTCCA+TGG | + | chr8_1:39257218-39257237 | Msa1193070:intron | 25.0% |
| ! | AGTATAAATTCTGAATGTGA+GGG | - | chr8_1:39257293-39257312 | None:intergenic | 25.0% |
| ! | AAGTATAAATTCTGAATGTG+AGG | - | chr8_1:39257294-39257313 | None:intergenic | 25.0% |
| ! | TTTCATATTCAAAAGGGAAA+GGG | - | chr8_1:39257342-39257361 | None:intergenic | 25.0% |
| !! | TTTTCATATTCAAAAGGGAA+AGG | - | chr8_1:39257343-39257362 | None:intergenic | 25.0% |
| ! | ACATTATATCATCAAGCATT+GGG | - | chr8_1:39257446-39257465 | None:intergenic | 25.0% |
| ! | AACATTATATCATCAAGCAT+TGG | - | chr8_1:39257447-39257466 | None:intergenic | 25.0% |
| !! | TTTATCTGATATACTTGTTG+TGG | + | chr8_1:39257716-39257735 | Msa1193070:intron | 25.0% |
| !!! | TTATCTGATATACTTGTTGT+GGG | + | chr8_1:39257717-39257736 | Msa1193070:intron | 25.0% |
| ! | ACGGTAAGATAACAATAAAA+GGG | - | chr8_1:39257915-39257934 | None:intergenic | 25.0% |
| ! | AACGGTAAGATAACAATAAA+AGG | - | chr8_1:39257916-39257935 | None:intergenic | 25.0% |
| ! | GATTACCAAAGGAAATATAA+AGG | - | chr8_1:39258041-39258060 | None:intergenic | 25.0% |
| ! | CTTAATTTAGAGATTACCAA+AGG | - | chr8_1:39258052-39258071 | None:intergenic | 25.0% |
| ! | TTGAGAACATTTAAAAGGAA+AGG | - | chr8_1:39258105-39258124 | None:intergenic | 25.0% |
| ! | TTCTGATATGAAAACAAAGA+TGG | + | chr8_1:39258276-39258295 | Msa1193070:CDS | 25.0% |
| !! | AATAGAGAATGGTAATGTAT+TGG | + | chr8_1:39258324-39258343 | Msa1193070:intron | 25.0% |
| ! | TGGACTATCATTATATTCAA+TGG | - | chr8_1:39258471-39258490 | None:intergenic | 25.0% |
| ! | AACAAAAAATAAGAAGGAAC+GGG | - | chr8_1:39258494-39258513 | None:intergenic | 25.0% |
| !!! | TTTTGTTACTTCTAATGGAA+TGG | + | chr8_1:39258552-39258571 | Msa1193070:intron | 25.0% |
| !!! | AGACTTTTTTTATCTTGTAC+AGG | + | chr8_1:39259006-39259025 | Msa1193070:intron | 25.0% |
| ! | ATGTAGATGAGTGATATTTA+CGG | + | chr8_1:39259056-39259075 | Msa1193070:three_prime_UTR | 25.0% |
| ! | CAAAGTTTCTTTAATCTCAA+AGG | - | chr8_1:39259171-39259190 | None:intergenic | 25.0% |
| !!! | CTTTGAGATTAAAGAAACTT+TGG | + | chr8_1:39259169-39259188 | Msa1193070:three_prime_UTR | 25.0% |
| ! | AAATATAACTATGCTACCAT+AGG | + | chr8_1:39259197-39259216 | Msa1193070:three_prime_UTR | 25.0% |
| ! | CAGAAAGAAAAATATTCCTA+TGG | - | chr8_1:39259216-39259235 | None:intergenic | 25.0% |
| !! | TTTTAATCAGACGATAATGT+AGG | + | chr8_1:39259238-39259257 | Msa1193070:three_prime_UTR | 25.0% |
| !!! | ATTATTGGGTTTTAAACCAG+GGG | + | chr8_1:39255141-39255160 | Msa1193070:five_prime_UTR | 30.0% |
| ! | TCACAGACTTTCTCTTTTAA+TGG | + | chr8_1:39255218-39255237 | Msa1193070:CDS | 30.0% |
| GAGAGATTTACATACTTTGA+TGG | - | chr8_1:39255266-39255285 | None:intergenic | 30.0% | |
| TTATGATTTAGTGTCGCAAA+AGG | + | chr8_1:39255734-39255753 | Msa1193070:intron | 30.0% | |
| !!! | GTTGTTTTTATAAGCTGCTT+TGG | + | chr8_1:39255847-39255866 | Msa1193070:intron | 30.0% |
| !! | TGTTTTTATAAGCTGCTTTG+GGG | + | chr8_1:39255849-39255868 | Msa1193070:intron | 30.0% |
| ! | TTTTCATAAATTCCCCAAAG+CGG | - | chr8_1:39255864-39255883 | None:intergenic | 30.0% |
| ! | TTTTCATAAATTCCCCAAAG+CGG | - | chr8_1:39255864-39255883 | None:intergenic | 30.0% |
| CAACACACAATTTAGTACAA+AGG | - | chr8_1:39256122-39256141 | None:intergenic | 30.0% | |
| TTGTACTAAATTGTGTGTTG+TGG | + | chr8_1:39256122-39256141 | Msa1193070:intron | 30.0% | |
| !!! | AAGTAAGAAGCTATTTTAGC+AGG | + | chr8_1:39256253-39256272 | Msa1193070:intron | 30.0% |
| !!! | AGTAAGAAGCTATTTTAGCA+GGG | + | chr8_1:39256254-39256273 | Msa1193070:intron | 30.0% |
| !! | TATTCCCCTAGTAATTTGTT+AGG | + | chr8_1:39256393-39256412 | Msa1193070:intron | 30.0% |
| CAATCCTAACAAATTACTAG+GGG | - | chr8_1:39256400-39256419 | None:intergenic | 30.0% | |
| GTCAATCCTAACAAATTACT+AGG | - | chr8_1:39256402-39256421 | None:intergenic | 30.0% | |
| ATTGACTGAAATCCTAACAA+AGG | + | chr8_1:39256416-39256435 | Msa1193070:intron | 30.0% | |
| ATCTAGATCCTTTCTCTAAT+GGG | - | chr8_1:39256454-39256473 | None:intergenic | 30.0% | |
| GTTGATTAGTGTATATGGAA+TGG | + | chr8_1:39256574-39256593 | Msa1193070:intron | 30.0% | |
| ACAGAAGGAACAAACATATA+CGG | - | chr8_1:39256626-39256645 | None:intergenic | 30.0% | |
| AGTATGGAAAAAGTAGCAAA+CGG | - | chr8_1:39256659-39256678 | None:intergenic | 30.0% | |
| !!! | TGCTACTTTTTCCATACTAA+AGG | + | chr8_1:39256661-39256680 | Msa1193070:intron | 30.0% |
| ! | AAAGGACTAGTATAATGAAG+TGG | + | chr8_1:39256679-39256698 | Msa1193070:intron | 30.0% |
| TAGTCATTCCCTTTACAATA+TGG | + | chr8_1:39256962-39256981 | Msa1193070:intron | 30.0% | |
| GATATGCAACCATATTGTAA+AGG | - | chr8_1:39256974-39256993 | None:intergenic | 30.0% | |
| TGCATATCATTCAATGCTAT+TGG | + | chr8_1:39256986-39257005 | Msa1193070:intron | 30.0% | |
| TTCATATTCAAAAGGGAAAG+GGG | - | chr8_1:39257341-39257360 | None:intergenic | 30.0% | |
| ACATGTGATCATTATCTTCT+TGG | + | chr8_1:39257467-39257486 | Msa1193070:intron | 30.0% | |
| AAGATTAGAAAATGGTATGC+CGG | - | chr8_1:39257498-39257517 | None:intergenic | 30.0% | |
| TTCTGCAGTTTCTGTAAAAA+CGG | + | chr8_1:39257776-39257795 | Msa1193070:CDS | 30.0% | |
| AACATCCTTGACTATCTATT+AGG | + | chr8_1:39257875-39257894 | Msa1193070:CDS | 30.0% | |
| ACATCCTTGACTATCTATTA+GGG | + | chr8_1:39257876-39257895 | Msa1193070:CDS | 30.0% | |
| GGTAAGATAACAATAAAAGG+GGG | - | chr8_1:39257913-39257932 | None:intergenic | 30.0% | |
| CGGTAAGATAACAATAAAAG+GGG | - | chr8_1:39257914-39257933 | None:intergenic | 30.0% | |
| ACTCAACAACATGAATAGAA+CGG | - | chr8_1:39257934-39257953 | None:intergenic | 30.0% | |
| CACTTATGAATCCATTGAAA+TGG | - | chr8_1:39257982-39258001 | None:intergenic | 30.0% | |
| !! | GTTAGCCTTTATATTTCCTT+TGG | + | chr8_1:39258033-39258052 | Msa1193070:intron | 30.0% |
| CTTTGCACGTGATATATATA+GGG | + | chr8_1:39258219-39258238 | Msa1193070:CDS | 30.0% | |
| ! | TCTCTATTTTCATGACACTT+TGG | - | chr8_1:39258312-39258331 | None:intergenic | 30.0% |
| AGTGTCATGAAAATAGAGAA+TGG | + | chr8_1:39258313-39258332 | Msa1193070:CDS | 30.0% | |
| ATACCTCGATTAAGATATTG+AGG | - | chr8_1:39258400-39258419 | None:intergenic | 30.0% | |
| ATCTTAATCGAGGTATGAAT+AGG | + | chr8_1:39258404-39258423 | Msa1193070:intron | 30.0% | |
| !! | CAAAATTTACTGGTTTGTCT+TGG | - | chr8_1:39258537-39258556 | None:intergenic | 30.0% |
| ! | ATTTTGCAGTGTGTTTTATC+AGG | - | chr8_1:39258643-39258662 | None:intergenic | 30.0% |
| GATCACTTCACTTTCTATTA+GGG | - | chr8_1:39258744-39258763 | None:intergenic | 30.0% | |
| TGATCACTTCACTTTCTATT+AGG | - | chr8_1:39258745-39258764 | None:intergenic | 30.0% | |
| CAACAACTGTTATCAAGATT+TGG | - | chr8_1:39258804-39258823 | None:intergenic | 30.0% | |
| ! | ATCAGAGTATATACCACTTT+TGG | + | chr8_1:39258858-39258877 | Msa1193070:CDS | 30.0% |
| !! | TCAGAGTATATACCACTTTT+GGG | + | chr8_1:39258859-39258878 | Msa1193070:CDS | 30.0% |
| ATACCTCATAGTTCAATATC+TGG | - | chr8_1:39258919-39258938 | None:intergenic | 30.0% | |
| TGACATGTAGACAGATTTAA+CGG | + | chr8_1:39259279-39259298 | Msa1193070:three_prime_UTR | 30.0% | |
| ! | TTTTGTGTAACTGAAGTACA+AGG | + | chr8_1:39259348-39259367 | Msa1193070:three_prime_UTR | 30.0% |
| TCTGTGAAGTGAAGATGAAA+AGG | - | chr8_1:39255205-39255224 | None:intergenic | 35.0% | |
| !!! | ATGGAGACGTTGAGTTTTTT+CGG | - | chr8_1:39255247-39255266 | None:intergenic | 35.0% |
| ! | GTAGCAATGGACATTGTTTT+TGG | - | chr8_1:39255404-39255423 | None:intergenic | 35.0% |
| ! | GCATGAATGTGAGTTCATTT+TGG | + | chr8_1:39255548-39255567 | Msa1193070:intron | 35.0% |
| TCAGTGAAGAAATTAGCTCA+TGG | + | chr8_1:39255574-39255593 | Msa1193070:intron | 35.0% | |
| CAGTGAAGAAATTAGCTCAT+GGG | + | chr8_1:39255575-39255594 | Msa1193070:intron | 35.0% | |
| !!! | AGTGGTAAGGTTTTGAGAAA+TGG | + | chr8_1:39255659-39255678 | Msa1193070:intron | 35.0% |
| !! | TAAGTTTTGTCACTGTTTGG+CGG | - | chr8_1:39256060-39256079 | None:intergenic | 35.0% |
| !! | GCATAAGTTTTGTCACTGTT+TGG | - | chr8_1:39256063-39256082 | None:intergenic | 35.0% |
| ACTTAATTGAGCTTATCTGC+TGG | - | chr8_1:39256085-39256104 | None:intergenic | 35.0% | |
| ! | TACAACTTTTACCCTGCTAA+AGG | - | chr8_1:39256268-39256287 | None:intergenic | 35.0% |
| ATCCTAACAAAGGAAGAATC+TGG | + | chr8_1:39256426-39256445 | Msa1193070:intron | 35.0% | |
| TTCCAGATTCTTCCTTTGTT+AGG | - | chr8_1:39256431-39256450 | None:intergenic | 35.0% | |
| GATCTAGATCCTTTCTCTAA+TGG | - | chr8_1:39256455-39256474 | None:intergenic | 35.0% | |
| !!! | GTCTATTTTGACATGCCTTT+TGG | + | chr8_1:39256507-39256526 | Msa1193070:intron | 35.0% |
| !! | ATGCCTTTTGGTTGTTGATT+AGG | + | chr8_1:39256519-39256538 | Msa1193070:intron | 35.0% |
| !! | TGCCTTTTGGTTGTTGATTA+GGG | + | chr8_1:39256520-39256539 | Msa1193070:intron | 35.0% |
| TACCCTAATCAACAACCAAA+AGG | - | chr8_1:39256525-39256544 | None:intergenic | 35.0% | |
| ! | GTTGTTGATTAGGGTAACTT+AGG | + | chr8_1:39256529-39256548 | Msa1193070:intron | 35.0% |
| AACAAACATATACGGCCAAA+AGG | - | chr8_1:39256618-39256637 | None:intergenic | 35.0% | |
| GACTAGTATAATGAAGTGGA+AGG | + | chr8_1:39256683-39256702 | Msa1193070:intron | 35.0% | |
| GTTCTACTTTATGAGAGTAG+TGG | + | chr8_1:39256762-39256781 | Msa1193070:intron | 35.0% | |
| AAGAGAGTGAGATGTAAAAG+TGG | - | chr8_1:39257136-39257155 | None:intergenic | 35.0% | |
| AACTGCTTAGTGTGCTAATT+TGG | + | chr8_1:39257183-39257202 | Msa1193070:intron | 35.0% | |
| ACTAATTCATGCAAAGACCA+TGG | - | chr8_1:39257238-39257257 | None:intergenic | 35.0% | |
| TCATATCTCACCCTTTGTTA+TGG | - | chr8_1:39257409-39257428 | None:intergenic | 35.0% | |
| !! | CATTATCTTCTTGGTCTTAC+CGG | + | chr8_1:39257476-39257495 | Msa1193070:intron | 35.0% |
| AGTACTTGAGAAAGCAGAAA+AGG | + | chr8_1:39257551-39257570 | Msa1193070:CDS | 35.0% | |
| !! | AATTGCAGGGAACTGATTTT+TGG | + | chr8_1:39257619-39257638 | Msa1193070:CDS | 35.0% |
| ! | AAGTAACTGAAAGTATACCC+CGG | - | chr8_1:39257667-39257686 | None:intergenic | 35.0% |
| CATCCTTGACTATCTATTAG+GGG | + | chr8_1:39257877-39257896 | Msa1193070:CDS | 35.0% | |
| ATACCCCTAATAGATAGTCA+AGG | - | chr8_1:39257883-39257902 | None:intergenic | 35.0% | |
| TTTAACAAGGGCCATTTCAA+TGG | + | chr8_1:39257968-39257987 | Msa1193070:intron | 35.0% | |
| GCTTTGCACGTGATATATAT+AGG | + | chr8_1:39258218-39258237 | Msa1193070:CDS | 35.0% | |
| AAAAAATAAGAAGGAACGGG+TGG | - | chr8_1:39258491-39258510 | None:intergenic | 35.0% | |
| ! | TGTTACTTCTAATGGAATGG+TGG | + | chr8_1:39258555-39258574 | Msa1193070:intron | 35.0% |
| ACTTCACTTTCTATTAGGGT+GGG | - | chr8_1:39258740-39258759 | None:intergenic | 35.0% | |
| TGATCCAAGTTCTTTCTTAG+TGG | + | chr8_1:39258888-39258907 | Msa1193070:CDS | 35.0% | |
| GATCCAAGTTCTTTCTTAGT+GGG | + | chr8_1:39258889-39258908 | Msa1193070:CDS | 35.0% | |
| GTTCCAGATATTGAACTATG+AGG | + | chr8_1:39258913-39258932 | Msa1193070:CDS | 35.0% | |
| ATCTTGTACAGGTCATCAAT+TGG | + | chr8_1:39259017-39259036 | Msa1193070:intron | 35.0% | |
| TCTGTCTACATGTCAAAACA+AGG | - | chr8_1:39259274-39259293 | None:intergenic | 35.0% | |
| GACATGTAGACAGATTTAAC+GGG | + | chr8_1:39259280-39259299 | Msa1193070:three_prime_UTR | 35.0% | |
| AGATTTAACGGGATAAACCA+TGG | + | chr8_1:39259291-39259310 | Msa1193070:three_prime_UTR | 35.0% | |
| TGTTTAATATGGCTGATCCA+TGG | - | chr8_1:39259311-39259330 | None:intergenic | 35.0% | |
| ! | TCTGGGTTTTCAACAGTTAC+AGG | + | chr8_1:39255350-39255369 | Msa1193070:intron | 40.0% |
| !! | CTTTGTTGTGTTCTGGAAGT+TGG | - | chr8_1:39255378-39255397 | None:intergenic | 40.0% |
| ! | TTGGTCTCTTTGTTGTGTTC+TGG | - | chr8_1:39255385-39255404 | None:intergenic | 40.0% |
| TTCCTTCATAGCAGAATCAG+TGG | - | chr8_1:39255441-39255460 | None:intergenic | 40.0% | |
| GACATCACTTTGGCCATATT+TGG | + | chr8_1:39255765-39255784 | Msa1193070:intron | 40.0% | |
| ! | TGTTTTCATAAGCTCCGCTT+TGG | + | chr8_1:39255919-39255938 | Msa1193070:intron | 40.0% |
| ! | GTTTTCATAAGCTCCGCTTT+GGG | + | chr8_1:39255920-39255939 | Msa1193070:intron | 40.0% |
| ! | TTTTCATAAGCTCCGCTTTG+GGG | + | chr8_1:39255921-39255940 | Msa1193070:intron | 40.0% |
| ! | TGTTTTCATAAGCTCCGCTT+TGG | + | chr8_1:39255919-39255938 | Msa1193070:intron | 40.0% |
| ! | GTTTTCATAAGCTCCGCTTT+GGG | + | chr8_1:39255920-39255939 | Msa1193070:intron | 40.0% |
| ! | TTTTCATAAGCTCCGCTTTG+GGG | + | chr8_1:39255921-39255940 | Msa1193070:intron | 40.0% |
| TTTAGTACAAAGGGCCTGTT+TGG | - | chr8_1:39256112-39256131 | None:intergenic | 40.0% | |
| TGTGTGTTGTGGAACAATAG+TGG | + | chr8_1:39256133-39256152 | Msa1193070:intron | 40.0% | |
| ! | TACTACATTCGGAAAGCACA+TGG | + | chr8_1:39256202-39256221 | Msa1193070:intron | 40.0% |
| ! | ACTACATTCGGAAAGCACAT+GGG | + | chr8_1:39256203-39256222 | Msa1193070:intron | 40.0% |
| GATTAGACGTACCTTTAGCA+GGG | + | chr8_1:39256295-39256314 | Msa1193070:intron | 40.0% | |
| ATTACTAGGGGAATATCTCG+AGG | - | chr8_1:39256388-39256407 | None:intergenic | 40.0% | |
| ! | ATCTGGAACCCATTAGAGAA+AGG | + | chr8_1:39256443-39256462 | Msa1193070:intron | 40.0% |
| GGATCTAGATCTCTTGACTT+CGG | + | chr8_1:39256464-39256483 | Msa1193070:intron | 40.0% | |
| ! | AGGTCATATTTCAAGTGCAC+AGG | + | chr8_1:39257103-39257122 | Msa1193070:CDS | 40.0% |
| GAGTGAGATGTAAAAGTGGT+AGG | - | chr8_1:39257132-39257151 | None:intergenic | 40.0% | |
| TTCATGCTTGTGTGTGTTGT+TGG | + | chr8_1:39257154-39257173 | Msa1193070:intron | 40.0% | |
| TATTCAAAAGGGAAAGGGGT+GGG | - | chr8_1:39257337-39257356 | None:intergenic | 40.0% | |
| ATATTCAAAAGGGAAAGGGG+TGG | - | chr8_1:39257338-39257357 | None:intergenic | 40.0% | |
| !! | CAAGCATTGGGAGTAATACT+TGG | - | chr8_1:39257434-39257453 | None:intergenic | 40.0% |
| ! | TCGACTAGTCAAAGAATTGC+AGG | + | chr8_1:39257605-39257624 | Msa1193070:CDS | 40.0% |
| ! | CGACTAGTCAAAGAATTGCA+GGG | + | chr8_1:39257606-39257625 | Msa1193070:CDS | 40.0% |
| ! | AGTAACTGAAAGTATACCCC+GGG | - | chr8_1:39257666-39257685 | None:intergenic | 40.0% |
| TTGTGGGTATTTGCAGATAC+AGG | + | chr8_1:39257733-39257752 | Msa1193070:intron | 40.0% | |
| TGAAGAGAAGGATCACTAAG+CGG | - | chr8_1:39257842-39257861 | None:intergenic | 40.0% | |
| TCAAGGATGTTTATCTGCAG+AGG | - | chr8_1:39257866-39257885 | None:intergenic | 40.0% | |
| TTACAGCTTGCAGATTTGAC+CGG | + | chr8_1:39258127-39258146 | Msa1193070:intron | 40.0% | |
| GCTATTGGTAGGATATCAGA+TGG | + | chr8_1:39258166-39258185 | Msa1193070:CDS | 40.0% | |
| TCAGAACTGTCATCCATATG+TGG | - | chr8_1:39258262-39258281 | None:intergenic | 40.0% | |
| !! | TTTCATGACACTTTGGAGCA+TGG | - | chr8_1:39258305-39258324 | None:intergenic | 40.0% |
| ACGCCTCAATATCTTAATCG+AGG | + | chr8_1:39258394-39258413 | Msa1193070:intron | 40.0% | |
| !! | AGGATAGTCTTGTGACTGAT+CGG | + | chr8_1:39258424-39258443 | Msa1193070:intron | 40.0% |
| CACTTCACTTTCTATTAGGG+TGG | - | chr8_1:39258741-39258760 | None:intergenic | 40.0% | |
| TGCTTTAGTGTTCATGTCAG+AGG | + | chr8_1:39258835-39258854 | Msa1193070:CDS | 40.0% | |
| GGATCATTTGATCCCAAAAG+TGG | - | chr8_1:39258874-39258893 | None:intergenic | 40.0% | |
| ACTCCCACTAAGAAAGAACT+TGG | - | chr8_1:39258895-39258914 | None:intergenic | 40.0% | |
| CTTCGTGAAGATGACATGTA+TGG | + | chr8_1:39259084-39259103 | Msa1193070:three_prime_UTR | 40.0% | |
| CTACATGTCAAAACAAGGCT+TGG | - | chr8_1:39259269-39259288 | None:intergenic | 40.0% | |
| !!! | GGGTTTTAAACCAGGGGTTT+AGG | + | chr8_1:39255147-39255166 | Msa1193070:five_prime_UTR | 45.0% |
| ACATCTGTTCAGTTCCTCCT+AGG | - | chr8_1:39255176-39255195 | None:intergenic | 45.0% | |
| !! | TGCCACTGATTCTGCTATGA+AGG | + | chr8_1:39255436-39255455 | Msa1193070:CDS | 45.0% |
| ! | TATTTTTCATTTGGGGGGCG+TGG | + | chr8_1:39255635-39255654 | Msa1193070:intron | 45.0% |
| !! | ATTTTTCATTTGGGGGGCGT+GGG | + | chr8_1:39255636-39255655 | Msa1193070:intron | 45.0% |
| GGCGATATCTGACATCACTT+TGG | + | chr8_1:39255755-39255774 | Msa1193070:intron | 45.0% | |
| ! | CTACATTCGGAAAGCACATG+GGG | + | chr8_1:39256204-39256223 | Msa1193070:intron | 45.0% |
| CGATTAGACGTACCTTTAGC+AGG | + | chr8_1:39256294-39256313 | Msa1193070:intron | 45.0% | |
| TCTAGATCTCTTGACTTCGG+AGG | + | chr8_1:39256467-39256486 | Msa1193070:intron | 45.0% | |
| AACGGACAAAAGCTGACAGA+AGG | - | chr8_1:39256641-39256660 | None:intergenic | 45.0% | |
| AATTTGAGGGGAGAGAGAGA+TGG | - | chr8_1:39256727-39256746 | None:intergenic | 45.0% | |
| ATTCAAAAGGGAAAGGGGTG+GGG | - | chr8_1:39257336-39257355 | None:intergenic | 45.0% | |
| TGATGCGTTTGGCTATTGGT+AGG | + | chr8_1:39258155-39258174 | Msa1193070:CDS | 45.0% | |
| CTTTCTATTAGGGTGGGAAG+AGG | - | chr8_1:39258734-39258753 | None:intergenic | 45.0% | |
| ! | GTACAAGGCTGATTCTAGCT+AGG | + | chr8_1:39259363-39259382 | Msa1193070:three_prime_UTR | 45.0% |
| !! | ATAATATAATAAATAGTTAA+GGG | - | chr8_1:39258599-39258618 | None:intergenic | 5.0% |
| !! | AATAATATAATAAATAGTTA+AGG | - | chr8_1:39258600-39258619 | None:intergenic | 5.0% |
| !! | TATAAAATAAATGTTTAATA+TGG | - | chr8_1:39259322-39259341 | None:intergenic | 5.0% |
| AGTGGCAGTGTCAGTAGCAA+TGG | - | chr8_1:39255417-39255436 | None:intergenic | 50.0% | |
| CATAGCAGAATCAGTGGCAG+TGG | - | chr8_1:39255435-39255454 | None:intergenic | 50.0% | |
| ! | TCGGAGGTGTAACTCAGATG+CGG | + | chr8_1:39256483-39256502 | Msa1193070:intron | 50.0% |
| TTCAAAAGGGAAAGGGGTGG+GGG | - | chr8_1:39257335-39257354 | None:intergenic | 50.0% | |
| AAAGTATACCCCGGGTGAGT+AGG | - | chr8_1:39257658-39257677 | None:intergenic | 50.0% | |
| ATCTGCAGAGGCTGAAGAGA+AGG | - | chr8_1:39257854-39257873 | None:intergenic | 50.0% | |
| GAGCTGATGCGTTTGGCTAT+TGG | + | chr8_1:39258151-39258170 | Msa1193070:CDS | 50.0% | |
| TACACTCGTCGTGCCACATA+TGG | + | chr8_1:39258246-39258265 | Msa1193070:CDS | 50.0% | |
| ACCAGGGGTTTAGGTGTCCT+AGG | + | chr8_1:39255156-39255175 | Msa1193070:five_prime_UTR | 55.0% | |
| TCCTAGGACACCTAAACCCC+TGG | - | chr8_1:39255160-39255179 | None:intergenic | 55.0% | |
| AGGGGTTTAGGTGTCCTAGG+AGG | + | chr8_1:39255159-39255178 | Msa1193070:five_prime_UTR | 55.0% | |
| AGGCAACATGCGTGTGACAC+AGG | - | chr8_1:39256368-39256387 | None:intergenic | 55.0% | |
| ! | TGACTAGTCGAGACACGTGC+TGG | - | chr8_1:39257596-39257615 | None:intergenic | 55.0% |
| CTAAGACGAGCCTACTCACC+CGG | + | chr8_1:39257645-39257664 | Msa1193070:CDS | 55.0% | |
| TAAGACGAGCCTACTCACCC+GGG | + | chr8_1:39257646-39257665 | Msa1193070:CDS | 55.0% | |
| AGCCAAACGCATCAGCTCTC+CGG | - | chr8_1:39258149-39258168 | None:intergenic | 55.0% | |
| AAGGGAAAGGGGTGGGGGTA+GGG | - | chr8_1:39257330-39257349 | None:intergenic | 60.0% | |
| AAAGGGAAAGGGGTGGGGGT+AGG | - | chr8_1:39257331-39257350 | None:intergenic | 60.0% | |
| AAGACGAGCCTACTCACCCG+GGG | + | chr8_1:39257647-39257666 | Msa1193070:CDS | 60.0% | |
| GACCGGAGAGCTGATGCGTT+TGG | + | chr8_1:39258144-39258163 | Msa1193070:CDS | 60.0% | |
| ! | TCATTTGGGGGGCGTGGGAG+TGG | + | chr8_1:39255641-39255660 | Msa1193070:intron | 65.0% |
| AGGGAAAGGGGTGGGGGTAG+GGG | - | chr8_1:39257329-39257348 | None:intergenic | 65.0% | |
| ! | TGGGGGGCGTGGGAGTGGTA+AGG | + | chr8_1:39255646-39255665 | Msa1193070:intron | 70.0% |
| GGGAAAGGGGTGGGGGTAGG+GGG | - | chr8_1:39257328-39257347 | None:intergenic | 70.0% | |
| GTGGGGGTAGGGGGAGAGGG+AGG | - | chr8_1:39257319-39257338 | None:intergenic | 75.0% | |
| GGGGTGGGGGTAGGGGGAGA+GGG | - | chr8_1:39257322-39257341 | None:intergenic | 75.0% | |
| AGGGGTGGGGGTAGGGGGAG+AGG | - | chr8_1:39257323-39257342 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 39255063 | 39259399 | 39255063 | ID=Msa1193070;Name=Msa1193070 |
| chr8_1 | mRNA | 39255063 | 39259399 | 39255063 | ID=Msa1193070-mRNA-1;Parent=Msa1193070;Name=Msa1193070-mRNA-1;_AED=0.09;_eAED=0.09;_QI=129|1|1|1|0.85|0.75|8|373|294 |
| chr8_1 | exon | 39255063 | 39255270 | 39255063 | ID=Msa1193070-mRNA-1:exon:12823;Parent=Msa1193070-mRNA-1 |
| chr8_1 | exon | 39255366 | 39255496 | 39255366 | ID=Msa1193070-mRNA-1:exon:12824;Parent=Msa1193070-mRNA-1 |
| chr8_1 | exon | 39257045 | 39257124 | 39257045 | ID=Msa1193070-mRNA-1:exon:12825;Parent=Msa1193070-mRNA-1 |
| chr8_1 | exon | 39257527 | 39257668 | 39257527 | ID=Msa1193070-mRNA-1:exon:12826;Parent=Msa1193070-mRNA-1 |
| chr8_1 | exon | 39257749 | 39257898 | 39257749 | ID=Msa1193070-mRNA-1:exon:12827;Parent=Msa1193070-mRNA-1 |
| chr8_1 | exon | 39258133 | 39258334 | 39258133 | ID=Msa1193070-mRNA-1:exon:12828;Parent=Msa1193070-mRNA-1 |
| chr8_1 | exon | 39258833 | 39258934 | 39258833 | ID=Msa1193070-mRNA-1:exon:12829;Parent=Msa1193070-mRNA-1 |
| chr8_1 | exon | 39259028 | 39259399 | 39259028 | ID=Msa1193070-mRNA-1:exon:12830;Parent=Msa1193070-mRNA-1 |
| chr8_1 | five_prime_UTR | 39255063 | 39255191 | 39255063 | ID=Msa1193070-mRNA-1:five_prime_utr;Parent=Msa1193070-mRNA-1 |
| chr8_1 | CDS | 39255192 | 39255270 | 39255192 | ID=Msa1193070-mRNA-1:cds;Parent=Msa1193070-mRNA-1 |
| chr8_1 | CDS | 39255366 | 39255496 | 39255366 | ID=Msa1193070-mRNA-1:cds;Parent=Msa1193070-mRNA-1 |
| chr8_1 | CDS | 39257045 | 39257124 | 39257045 | ID=Msa1193070-mRNA-1:cds;Parent=Msa1193070-mRNA-1 |
| chr8_1 | CDS | 39257527 | 39257668 | 39257527 | ID=Msa1193070-mRNA-1:cds;Parent=Msa1193070-mRNA-1 |
| chr8_1 | CDS | 39257749 | 39257898 | 39257749 | ID=Msa1193070-mRNA-1:cds;Parent=Msa1193070-mRNA-1 |
| chr8_1 | CDS | 39258133 | 39258334 | 39258133 | ID=Msa1193070-mRNA-1:cds;Parent=Msa1193070-mRNA-1 |
| chr8_1 | CDS | 39258833 | 39258933 | 39258833 | ID=Msa1193070-mRNA-1:cds;Parent=Msa1193070-mRNA-1 |
| chr8_1 | three_prime_UTR | 39258934 | 39258934 | 39258934 | ID=Msa1193070-mRNA-1:three_prime_utr;Parent=Msa1193070-mRNA-1 |
| chr8_1 | three_prime_UTR | 39259028 | 39259399 | 39259028 | ID=Msa1193070-mRNA-1:three_prime_utr;Parent=Msa1193070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
