Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0095940 | XP_003611221.1 | 97.959 | 441 | 9 | 0 | 1 | 441 | 1 | 441 | 0.0 | 895 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0095940 | sp|Q9LNA5|ACR8_ARATH | 67.720 | 443 | 139 | 3 | 1 | 441 | 1 | 441 | 0.0 | 595 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0095940 | G7KG51 | 97.959 | 441 | 9 | 0 | 1 | 441 | 1 | 441 | 0.0 | 895 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000800 | Msa0095940 | 0.808408 | 3.143396e-50 | -8.615850e-47 |
| Msa0009640 | Msa0095940 | 0.853544 | 2.227824e-61 | -8.615850e-47 |
| Msa0010700 | Msa0095940 | 0.811842 | 5.719413e-51 | -8.615850e-47 |
| Msa0022470 | Msa0095940 | 0.802374 | 5.783835e-49 | -8.615850e-47 |
| Msa0025510 | Msa0095940 | 0.806889 | 6.605649e-50 | -8.615850e-47 |
| Msa0027020 | Msa0095940 | -0.800720 | 1.262652e-48 | -8.615850e-47 |
| Msa0042490 | Msa0095940 | -0.805903 | 1.065981e-49 | -8.615850e-47 |
| Msa0043740 | Msa0095940 | 0.809959 | 1.461765e-50 | -8.615850e-47 |
| Msa0051960 | Msa0095940 | 0.847700 | 9.796183e-60 | -8.615850e-47 |
| Msa0052580 | Msa0095940 | 0.825566 | 4.371233e-54 | -8.615850e-47 |
| Msa0052780 | Msa0095940 | 0.820068 | 8.337948e-53 | -8.615850e-47 |
| Msa0070120 | Msa0095940 | 0.821956 | 3.064994e-53 | -8.615850e-47 |
| Msa0077370 | Msa0095940 | 0.801422 | 9.073505e-49 | -8.615850e-47 |
| Msa0078700 | Msa0095940 | 0.825716 | 4.026745e-54 | -8.615850e-47 |
| Msa0090090 | Msa0095940 | 0.808708 | 2.711565e-50 | -8.615850e-47 |
| Msa0090380 | Msa0095940 | 0.803363 | 3.612223e-49 | -8.615850e-47 |
| Msa0090870 | Msa0095940 | 0.838648 | 2.537866e-57 | -8.615850e-47 |
| Msa0094710 | Msa0095940 | 0.806947 | 6.422994e-50 | -8.615850e-47 |
| Msa0095940 | Msa0097570 | 0.827434 | 1.567770e-54 | -8.615850e-47 |
| Msa0095940 | Msa0101960 | 0.859480 | 4.018670e-63 | -8.615850e-47 |
| Msa0095940 | Msa0112550 | -0.818732 | 1.681290e-52 | -8.615850e-47 |
| Msa0095940 | Msa0117650 | 0.811948 | 5.422152e-51 | -8.615850e-47 |
| Msa0095940 | Msa0129770 | 0.811472 | 6.884413e-51 | -8.615850e-47 |
| Msa0095940 | Msa0129820 | -0.810138 | 1.338037e-50 | -8.615850e-47 |
| Msa0095940 | Msa0130500 | 0.803167 | 3.966015e-49 | -8.615850e-47 |
| Msa0095940 | Msa0137560 | 0.808794 | 2.599495e-50 | -8.615850e-47 |
| Msa0095940 | Msa0139680 | 0.822611 | 2.159771e-53 | -8.615850e-47 |
| Msa0095940 | Msa0150620 | 0.818532 | 1.866302e-52 | -8.615850e-47 |
| Msa0095940 | Msa0150640 | 0.838571 | 2.656897e-57 | -8.615850e-47 |
| Msa0095940 | Msa0158890 | -0.822463 | 2.337508e-53 | -8.615850e-47 |
| Msa0095940 | Msa0166260 | 0.812352 | 4.426167e-51 | -8.615850e-47 |
| Msa0095940 | Msa0167160 | -0.803031 | 4.232268e-49 | -8.615850e-47 |
| Msa0095940 | Msa0167570 | -0.803006 | 4.283335e-49 | -8.615850e-47 |
| Msa0095940 | Msa0168310 | 0.812354 | 4.423523e-51 | -8.615850e-47 |
| Msa0095940 | Msa0171330 | 0.833489 | 5.178795e-56 | -8.615850e-47 |
| Msa0095940 | Msa0178840 | -0.802848 | 4.616945e-49 | -8.615850e-47 |
| Msa0095940 | Msa0183390 | 0.839423 | 1.599012e-57 | -8.615850e-47 |
| Msa0095940 | Msa0185040 | 0.811239 | 7.732868e-51 | -8.615850e-47 |
| Msa0095940 | Msa0186240 | 0.841997 | 3.383032e-58 | -8.615850e-47 |
| Msa0095940 | Msa0187590 | -0.822667 | 2.095370e-53 | -8.615850e-47 |
| Msa0095940 | Msa0193190 | 0.800296 | 1.540598e-48 | -8.615850e-47 |
| Msa0095940 | Msa0193950 | 0.820687 | 6.011402e-53 | -8.615850e-47 |
| Msa0095940 | Msa0203090 | 0.811694 | 6.158588e-51 | -8.615850e-47 |
| Msa0095940 | Msa0211590 | -0.806275 | 8.901632e-50 | -8.615850e-47 |
| Msa0095940 | Msa0217060 | 0.812662 | 3.788211e-51 | -8.615850e-47 |
| Msa0095940 | Msa0225190 | -0.807626 | 4.611395e-50 | -8.615850e-47 |
| Msa0095940 | Msa0246140 | 0.802214 | 6.237532e-49 | -8.615850e-47 |
| Msa0095940 | Msa0256920 | 0.803423 | 3.510309e-49 | -8.615850e-47 |
| Msa0095940 | Msa0262350 | -0.808953 | 2.403938e-50 | -8.615850e-47 |
| Msa0095940 | Msa0265480 | 0.810250 | 1.265806e-50 | -8.615850e-47 |
| Msa0095940 | Msa0265650 | 0.835456 | 1.660602e-56 | -8.615850e-47 |
| Msa0095940 | Msa0268440 | -0.805178 | 1.513600e-49 | -8.615850e-47 |
| Msa0095940 | Msa0271720 | 0.800198 | 1.612709e-48 | -8.615850e-47 |
| Msa0095940 | Msa0282960 | 0.809693 | 1.667842e-50 | -8.615850e-47 |
| Msa0095940 | Msa0285890 | 0.809753 | 1.619430e-50 | -8.615850e-47 |
| Msa0095940 | Msa0286360 | 0.802831 | 4.655373e-49 | -8.615850e-47 |
| Msa0095940 | Msa0293720 | 0.826521 | 2.592502e-54 | -8.615850e-47 |
| Msa0095940 | Msa0296900 | 0.815518 | 8.872706e-52 | -8.615850e-47 |
| Msa0095940 | Msa0300130 | -0.800565 | 1.358047e-48 | -8.615850e-47 |
| Msa0095940 | Msa0306310 | 0.821925 | 3.114876e-53 | -8.615850e-47 |
| Msa0095940 | Msa0310190 | 0.810335 | 1.213280e-50 | -8.615850e-47 |
| Msa0095940 | Msa0319680 | 0.832216 | 1.072870e-55 | -8.615850e-47 |
| Msa0095940 | Msa0320170 | 0.861320 | 1.114816e-63 | -8.615850e-47 |
| Msa0095940 | Msa0335080 | 0.839846 | 1.240852e-57 | -8.615850e-47 |
| Msa0095940 | Msa0340370 | 0.817845 | 2.669057e-52 | -8.615850e-47 |
| Msa0095940 | Msa0340700 | -0.807834 | 4.163914e-50 | -8.615850e-47 |
| Msa0095940 | Msa0345050 | 0.845555 | 3.774943e-59 | -8.615850e-47 |
| Msa0095940 | Msa0345890 | 0.857912 | 1.181001e-62 | -8.615850e-47 |
| Msa0095940 | Msa0345900 | 0.824612 | 7.345279e-54 | -8.615850e-47 |
| Msa0095940 | Msa0349950 | 0.806070 | 9.835485e-50 | -8.615850e-47 |
| Msa0095940 | Msa0374870 | 0.820125 | 8.093151e-53 | -8.615850e-47 |
| Msa0095940 | Msa0374890 | 0.830065 | 3.622013e-55 | -8.615850e-47 |
| Msa0095940 | Msa0375070 | 0.829714 | 4.411350e-55 | -8.615850e-47 |
| Msa0095940 | Msa0383900 | 0.876291 | 1.569768e-68 | -8.615850e-47 |
| Msa0095940 | Msa0393100 | 0.801254 | 9.820458e-49 | -8.615850e-47 |
| Msa0095940 | Msa0395220 | 0.801294 | 9.638448e-49 | -8.615850e-47 |
| Msa0095940 | Msa0397420 | -0.811279 | 7.581555e-51 | -8.615850e-47 |
| Msa0095940 | Msa0398390 | 0.833911 | 4.063769e-56 | -8.615850e-47 |
| Msa0095940 | Msa0405200 | 0.814440 | 1.539288e-51 | -8.615850e-47 |
| Msa0095940 | Msa0405210 | 0.800844 | 1.190932e-48 | -8.615850e-47 |
| Msa0095940 | Msa0415100 | 0.812503 | 4.102356e-51 | -8.615850e-47 |
| Msa0095940 | Msa0415640 | 0.804677 | 1.925565e-49 | -8.615850e-47 |
| Msa0095940 | Msa0434300 | 0.866406 | 2.919194e-65 | -8.615850e-47 |
| Msa0095940 | Msa0434400 | 0.873938 | 9.970571e-68 | -8.615850e-47 |
| Msa0095940 | Msa0441260 | 0.803228 | 3.853997e-49 | -8.615850e-47 |
| Msa0095940 | Msa0442860 | 0.875487 | 2.965676e-68 | -8.615850e-47 |
| Msa0095940 | Msa0444770 | -0.805613 | 1.226488e-49 | -8.615850e-47 |
| Msa0095940 | Msa0449490 | 0.817542 | 3.124865e-52 | -8.615850e-47 |
| Msa0095940 | Msa0459860 | 0.830350 | 3.085034e-55 | -8.615850e-47 |
| Msa0095940 | Msa0460600 | 0.800945 | 1.135876e-48 | -8.615850e-47 |
| Msa0095940 | Msa0464360 | 0.800827 | 1.200486e-48 | -8.615850e-47 |
| Msa0095940 | Msa0470880 | 0.814276 | 1.672843e-51 | -8.615850e-47 |
| Msa0095940 | Msa0473000 | 0.817902 | 2.592117e-52 | -8.615850e-47 |
| Msa0095940 | Msa0476890 | -0.807403 | 5.141063e-50 | -8.615850e-47 |
| Msa0095940 | Msa0478080 | 0.812284 | 4.580640e-51 | -8.615850e-47 |
| Msa0095940 | Msa0488580 | 0.822054 | 2.909006e-53 | -8.615850e-47 |
| Msa0095940 | Msa0490320 | 0.845325 | 4.357221e-59 | -8.615850e-47 |
| Msa0095940 | Msa0492330 | -0.810069 | 1.384185e-50 | -8.615850e-47 |
| Msa0095940 | Msa0497120 | 0.800253 | 1.571904e-48 | -8.615850e-47 |
| Msa0095940 | Msa0497680 | 0.801911 | 7.202132e-49 | -8.615850e-47 |
| Msa0095940 | Msa0497690 | 0.835065 | 2.084128e-56 | -8.615850e-47 |
| Msa0095940 | Msa0500610 | -0.805063 | 1.599506e-49 | -8.615850e-47 |
| Msa0095940 | Msa0500700 | -0.800376 | 1.483619e-48 | -8.615850e-47 |
| Msa0095940 | Msa0517200 | 0.827984 | 1.156771e-54 | -8.615850e-47 |
| Msa0095940 | Msa0517270 | 0.822424 | 2.386597e-53 | -8.615850e-47 |
| Msa0095940 | Msa0522140 | 0.860677 | 1.748773e-63 | -8.615850e-47 |
| Msa0095940 | Msa0522170 | 0.848719 | 5.123601e-60 | -8.615850e-47 |
| Msa0095940 | Msa0523980 | 0.810261 | 1.258584e-50 | -8.615850e-47 |
| Msa0095940 | Msa0529110 | 0.827640 | 1.398844e-54 | -8.615850e-47 |
| Msa0095940 | Msa0530730 | 0.833940 | 3.995670e-56 | -8.615850e-47 |
| Msa0095940 | Msa0531050 | 0.801023 | 1.094866e-48 | -8.615850e-47 |
| Msa0095940 | Msa0534610 | 0.862385 | 5.259989e-64 | -8.615850e-47 |
| Msa0095940 | Msa0535400 | 0.838765 | 2.368222e-57 | -8.615850e-47 |
| Msa0095940 | Msa0539040 | 0.820357 | 7.157424e-53 | -8.615850e-47 |
| Msa0095940 | Msa0545050 | 0.818221 | 2.195499e-52 | -8.615850e-47 |
| Msa0095940 | Msa0548410 | 0.849751 | 2.644331e-60 | -8.615850e-47 |
| Msa0095940 | Msa0548420 | 0.809059 | 2.281979e-50 | -8.615850e-47 |
| Msa0095940 | Msa0548650 | -0.820916 | 5.327160e-53 | -8.615850e-47 |
| Msa0095940 | Msa0550990 | -0.814788 | 1.288664e-51 | -8.615850e-47 |
| Msa0095940 | Msa0558650 | 0.831536 | 1.578890e-55 | -8.615850e-47 |
| Msa0095940 | Msa0561300 | 0.808853 | 2.525590e-50 | -8.615850e-47 |
| Msa0095940 | Msa0565180 | 0.826001 | 3.447549e-54 | -8.615850e-47 |
| Msa0095940 | Msa0567370 | 0.810915 | 9.090572e-51 | -8.615850e-47 |
| Msa0095940 | Msa0567430 | 0.829296 | 5.572312e-55 | -8.615850e-47 |
| Msa0095940 | Msa0567480 | 0.843498 | 1.350566e-58 | -8.615850e-47 |
| Msa0095940 | Msa0567520 | 0.815877 | 7.380230e-52 | -8.615850e-47 |
| Msa0095940 | Msa0570050 | 0.831349 | 1.755479e-55 | -8.615850e-47 |
| Msa0095940 | Msa0574420 | 0.806722 | 7.165380e-50 | -8.615850e-47 |
| Msa0095940 | Msa0576900 | 0.834884 | 2.315275e-56 | -8.615850e-47 |
| Msa0095940 | Msa0580890 | -0.800307 | 1.532652e-48 | -8.615850e-47 |
| Msa0095940 | Msa0581350 | 0.829221 | 5.811054e-55 | -8.615850e-47 |
| Msa0095940 | Msa0587120 | 0.810504 | 1.115566e-50 | -8.615850e-47 |
| Msa0095940 | Msa0590620 | -0.821057 | 4.942931e-53 | -8.615850e-47 |
| Msa0095940 | Msa0590810 | 0.868775 | 5.079710e-66 | -8.615850e-47 |
| Msa0095940 | Msa0592650 | 0.800251 | 1.573022e-48 | -8.615850e-47 |
| Msa0095940 | Msa0595270 | 0.822639 | 2.127717e-53 | -8.615850e-47 |
| Msa0095940 | Msa0597180 | 0.824352 | 8.458019e-54 | -8.615850e-47 |
| Msa0095940 | Msa0600590 | 0.826783 | 2.244213e-54 | -8.615850e-47 |
| Msa0095940 | Msa0603300 | 0.843528 | 1.325863e-58 | -8.615850e-47 |
| Msa0095940 | Msa0603310 | 0.847708 | 9.746284e-60 | -8.615850e-47 |
| Msa0095940 | Msa0606340 | -0.804510 | 2.086731e-49 | -8.615850e-47 |
| Msa0095940 | Msa0606350 | -0.808342 | 3.246683e-50 | -8.615850e-47 |
| Msa0095940 | Msa0611060 | 0.837026 | 6.625096e-57 | -8.615850e-47 |
| Msa0095940 | Msa0613300 | 0.809283 | 2.042514e-50 | -8.615850e-47 |
| Msa0095940 | Msa0613420 | 0.833956 | 3.959117e-56 | -8.615850e-47 |
| Msa0095940 | Msa0618550 | 0.811945 | 5.430994e-51 | -8.615850e-47 |
| Msa0095940 | Msa0619030 | -0.825070 | 5.726244e-54 | -8.615850e-47 |
| Msa0095940 | Msa0631130 | 0.863725 | 2.027637e-64 | -8.615850e-47 |
| Msa0095940 | Msa0637590 | 0.839481 | 1.544731e-57 | -8.615850e-47 |
| Msa0095940 | Msa0637700 | 0.805179 | 1.512414e-49 | -8.615850e-47 |
| Msa0095940 | Msa0637930 | -0.802329 | 5.906908e-49 | -8.615850e-47 |
| Msa0095940 | Msa0641130 | 0.824773 | 6.731537e-54 | -8.615850e-47 |
| Msa0095940 | Msa0644330 | 0.824083 | 9.783467e-54 | -8.615850e-47 |
| Msa0095940 | Msa0644340 | 0.826641 | 2.426825e-54 | -8.615850e-47 |
| Msa0095940 | Msa0650560 | 0.802689 | 4.979228e-49 | -8.615850e-47 |
| Msa0095940 | Msa0655940 | 0.800811 | 1.209836e-48 | -8.615850e-47 |
| Msa0095940 | Msa0657340 | 0.818482 | 1.916085e-52 | -8.615850e-47 |
| Msa0095940 | Msa0658190 | 0.808314 | 3.292133e-50 | -8.615850e-47 |
| Msa0095940 | Msa0669350 | 0.838297 | 3.126705e-57 | -8.615850e-47 |
| Msa0095940 | Msa0679670 | 0.810868 | 9.306411e-51 | -8.615850e-47 |
| Msa0095940 | Msa0682110 | 0.806783 | 6.956886e-50 | -8.615850e-47 |
| Msa0095940 | Msa0682160 | 0.808466 | 3.054986e-50 | -8.615850e-47 |
| Msa0095940 | Msa0684130 | 0.855777 | 5.024484e-62 | -8.615850e-47 |
| Msa0095940 | Msa0693750 | 0.809602 | 1.744837e-50 | -8.615850e-47 |
| Msa0095940 | Msa0695250 | -0.812356 | 4.417917e-51 | -8.615850e-47 |
| Msa0095940 | Msa0696380 | 0.808397 | 3.160074e-50 | -8.615850e-47 |
| Msa0095940 | Msa0699390 | 0.800958 | 1.128846e-48 | -8.615850e-47 |
| Msa0095940 | Msa0701430 | 0.804996 | 1.651793e-49 | -8.615850e-47 |
| Msa0095940 | Msa0703030 | 0.803435 | 3.491667e-49 | -8.615850e-47 |
| Msa0095940 | Msa0709140 | 0.823036 | 1.719545e-53 | -8.615850e-47 |
| Msa0095940 | Msa0723770 | 0.843730 | 1.170768e-58 | -8.615850e-47 |
| Msa0095940 | Msa0731580 | 0.813681 | 2.263581e-51 | -8.615850e-47 |
| Msa0095940 | Msa0731690 | 0.804635 | 1.964990e-49 | -8.615850e-47 |
| Msa0095940 | Msa0739820 | -0.823570 | 1.289750e-53 | -8.615850e-47 |
| Msa0095940 | Msa0740630 | 0.801021 | 1.095665e-48 | -8.615850e-47 |
| Msa0095940 | Msa0743370 | 0.809166 | 2.163822e-50 | -8.615850e-47 |
| Msa0095940 | Msa0744640 | 0.887481 | 1.374493e-72 | -8.615850e-47 |
| Msa0095940 | Msa0744710 | 0.855550 | 5.852274e-62 | -8.615850e-47 |
| Msa0095940 | Msa0760580 | 0.801095 | 1.058167e-48 | -8.615850e-47 |
| Msa0095940 | Msa0765140 | 0.830574 | 2.719947e-55 | -8.615850e-47 |
| Msa0095940 | Msa0778570 | 0.802668 | 5.030843e-49 | -8.615850e-47 |
| Msa0095940 | Msa0782960 | 0.801293 | 9.639009e-49 | -8.615850e-47 |
| Msa0095940 | Msa0788450 | -0.809566 | 1.776441e-50 | -8.615850e-47 |
| Msa0095940 | Msa0800150 | 0.808798 | 2.595173e-50 | -8.615850e-47 |
| Msa0095940 | Msa0800180 | 0.808208 | 3.466929e-50 | -8.615850e-47 |
| Msa0095940 | Msa0804870 | 0.834041 | 3.770428e-56 | -8.615850e-47 |
| Msa0095940 | Msa0820130 | -0.807033 | 6.157401e-50 | -8.615850e-47 |
| Msa0095940 | Msa0820880 | 0.803027 | 4.240400e-49 | -8.615850e-47 |
| Msa0095940 | Msa0825570 | -0.809054 | 2.286677e-50 | -8.615850e-47 |
| Msa0095940 | Msa0826240 | 0.849965 | 2.303922e-60 | -8.615850e-47 |
| Msa0095940 | Msa0826540 | -0.815782 | 7.749717e-52 | -8.615850e-47 |
| Msa0095940 | Msa0829210 | -0.803592 | 3.238266e-49 | -8.615850e-47 |
| Msa0095940 | Msa0829990 | 0.821407 | 4.103581e-53 | -8.615850e-47 |
| Msa0095940 | Msa0832950 | 0.850297 | 1.860305e-60 | -8.615850e-47 |
| Msa0095940 | Msa0833270 | 0.988144 | 6.986827e-173 | -8.615850e-47 |
| Msa0095940 | Msa0841730 | 0.887979 | 8.859524e-73 | -8.615850e-47 |
| Msa0095940 | Msa0859040 | 0.823426 | 1.393734e-53 | -8.615850e-47 |
| Msa0095940 | Msa0864820 | -0.819138 | 1.358977e-52 | -8.615850e-47 |
| Msa0095940 | Msa0870510 | 0.835727 | 1.418265e-56 | -8.615850e-47 |
| Msa0095940 | Msa0873910 | 0.802604 | 5.183989e-49 | -8.615850e-47 |
| Msa0095940 | Msa0882480 | -0.824999 | 5.951571e-54 | -8.615850e-47 |
| Msa0095940 | Msa0901270 | 0.856496 | 3.092670e-62 | -8.615850e-47 |
| Msa0095940 | Msa0901290 | 0.842599 | 2.343567e-58 | -8.615850e-47 |
| Msa0095940 | Msa0905570 | 0.830969 | 2.176514e-55 | -8.615850e-47 |
| Msa0095940 | Msa0909040 | 0.805468 | 1.315431e-49 | -8.615850e-47 |
| Msa0095940 | Msa0919120 | -0.834745 | 2.509703e-56 | -8.615850e-47 |
| Msa0095940 | Msa0925940 | 0.829291 | 5.590013e-55 | -8.615850e-47 |
| Msa0095940 | Msa0940910 | 0.814078 | 1.850371e-51 | -8.615850e-47 |
| Msa0095940 | Msa0945160 | -0.809397 | 1.930581e-50 | -8.615850e-47 |
| Msa0095940 | Msa0946330 | 0.807135 | 5.861082e-50 | -8.615850e-47 |
| Msa0095940 | Msa0966580 | 0.871597 | 6.053495e-67 | -8.615850e-47 |
| Msa0095940 | Msa0966590 | 0.827484 | 1.525428e-54 | -8.615850e-47 |
| Msa0095940 | Msa1001120 | 0.854285 | 1.362447e-61 | -8.615850e-47 |
| Msa0095940 | Msa1002550 | -0.802663 | 5.042162e-49 | -8.615850e-47 |
| Msa0095940 | Msa1008370 | 0.816690 | 4.855744e-52 | -8.615850e-47 |
| Msa0095940 | Msa1011250 | 0.809165 | 2.164892e-50 | -8.615850e-47 |
| Msa0095940 | Msa1026890 | 0.822877 | 1.872343e-53 | -8.615850e-47 |
| Msa0095940 | Msa1027340 | 0.814057 | 1.870340e-51 | -8.615850e-47 |
| Msa0095940 | Msa1027400 | 0.817105 | 3.917702e-52 | -8.615850e-47 |
| Msa0095940 | Msa1030210 | 0.861650 | 8.841216e-64 | -8.615850e-47 |
| Msa0095940 | Msa1030240 | 0.805319 | 1.413472e-49 | -8.615850e-47 |
| Msa0095940 | Msa1034450 | 0.805806 | 1.117216e-49 | -8.615850e-47 |
| Msa0095940 | Msa1034950 | 0.812916 | 3.331812e-51 | -8.615850e-47 |
| Msa0095940 | Msa1035050 | 0.824272 | 8.832107e-54 | -8.615850e-47 |
| Msa0095940 | Msa1062060 | 0.810922 | 9.059170e-51 | -8.615850e-47 |
| Msa0095940 | Msa1064240 | 0.814090 | 1.838554e-51 | -8.615850e-47 |
| Msa0095940 | Msa1069250 | 0.817554 | 3.105436e-52 | -8.615850e-47 |
| Msa0095940 | Msa1074200 | 0.806059 | 9.886779e-50 | -8.615850e-47 |
| Msa0095940 | Msa1075010 | 0.811890 | 5.582396e-51 | -8.615850e-47 |
| Msa0095940 | Msa1075090 | 0.843470 | 1.373834e-58 | -8.615850e-47 |
| Msa0095940 | Msa1077970 | 0.839281 | 1.740670e-57 | -8.615850e-47 |
| Msa0095940 | Msa1080610 | -0.828078 | 1.098077e-54 | -8.615850e-47 |
| Msa0095940 | Msa1080680 | -0.828413 | 9.115401e-55 | -8.615850e-47 |
| Msa0095940 | Msa1084890 | 0.807959 | 3.916841e-50 | -8.615850e-47 |
| Msa0095940 | Msa1086490 | -0.825011 | 5.913790e-54 | -8.615850e-47 |
| Msa0095940 | Msa1086670 | -0.811176 | 7.981810e-51 | -8.615850e-47 |
| Msa0095940 | Msa1089990 | 0.823710 | 1.196061e-53 | -8.615850e-47 |
| Msa0095940 | Msa1092310 | 0.824114 | 9.618348e-54 | -8.615850e-47 |
| Msa0095940 | Msa1102210 | 0.836366 | 9.762860e-57 | -8.615850e-47 |
| Msa0095940 | Msa1105390 | 0.810926 | 9.041928e-51 | -8.615850e-47 |
| Msa0095940 | Msa1107220 | 0.831730 | 1.414299e-55 | -8.615850e-47 |
| Msa0095940 | Msa1107250 | 0.811263 | 7.639740e-51 | -8.615850e-47 |
| Msa0095940 | Msa1114670 | 0.810202 | 1.296096e-50 | -8.615850e-47 |
| Msa0095940 | Msa1115980 | 0.828230 | 1.009316e-54 | -8.615850e-47 |
| Msa0095940 | Msa1120580 | 0.850211 | 1.966589e-60 | -8.615850e-47 |
| Msa0095940 | Msa1126320 | -0.825524 | 4.471882e-54 | -8.615850e-47 |
| Msa0095940 | Msa1129300 | -0.802491 | 5.469902e-49 | -8.615850e-47 |
| Msa0095940 | Msa1130150 | -0.814180 | 1.756772e-51 | -8.615850e-47 |
| Msa0095940 | Msa1131120 | 0.814993 | 1.160864e-51 | -8.615850e-47 |
| Msa0095940 | Msa1131430 | 0.804558 | 2.039265e-49 | -8.615850e-47 |
| Msa0095940 | Msa1133700 | 0.819379 | 1.197999e-52 | -8.615850e-47 |
| Msa0095940 | Msa1136760 | 0.827401 | 1.596805e-54 | -8.615850e-47 |
| Msa0095940 | Msa1137750 | 0.807210 | 5.648242e-50 | -8.615850e-47 |
| Msa0095940 | Msa1150760 | 0.802104 | 6.571554e-49 | -8.615850e-47 |
| Msa0095940 | Msa1154240 | 0.815835 | 7.541834e-52 | -8.615850e-47 |
| Msa0095940 | Msa1154570 | 0.810475 | 1.131872e-50 | -8.615850e-47 |
| Msa0095940 | Msa1157110 | 0.863031 | 3.326605e-64 | -8.615850e-47 |
| Msa0095940 | Msa1157670 | 0.804273 | 2.337986e-49 | -8.615850e-47 |
| Msa0095940 | Msa1159160 | 0.814434 | 1.543741e-51 | -8.615850e-47 |
| Msa0095940 | Msa1159170 | 0.825511 | 4.504328e-54 | -8.615850e-47 |
| Msa0095940 | Msa1167150 | -0.833116 | 6.414007e-56 | -8.615850e-47 |
| Msa0095940 | Msa1167310 | 0.811593 | 6.479556e-51 | -8.615850e-47 |
| Msa0095940 | Msa1173150 | 0.824740 | 6.851590e-54 | -8.615850e-47 |
| Msa0095940 | Msa1175100 | 0.822530 | 2.254849e-53 | -8.615850e-47 |
| Msa0095940 | Msa1177650 | 0.801294 | 9.637073e-49 | -8.615850e-47 |
| Msa0095940 | Msa1181140 | 0.834615 | 2.705731e-56 | -8.615850e-47 |
| Msa0095940 | Msa1185270 | 0.814150 | 1.784006e-51 | -8.615850e-47 |
| Msa0095940 | Msa1186170 | 0.804450 | 2.147975e-49 | -8.615850e-47 |
| Msa0095940 | Msa1197740 | -0.818842 | 1.587562e-52 | -8.615850e-47 |
| Msa0095940 | Msa1202110 | 0.849565 | 2.979867e-60 | -8.615850e-47 |
| Msa0095940 | Msa1202800 | 0.809566 | 1.775735e-50 | -8.615850e-47 |
| Msa0095940 | Msa1203810 | 0.815475 | 9.071830e-52 | -8.615850e-47 |
| Msa0095940 | Msa1208110 | 0.805123 | 1.554011e-49 | -8.615850e-47 |
| Msa0095940 | Msa1208990 | 0.809740 | 1.629887e-50 | -8.615850e-47 |
| Msa0095940 | Msa1211610 | 0.802894 | 4.517376e-49 | -8.615850e-47 |
| Msa0095940 | Msa1212150 | -0.801698 | 7.965450e-49 | -8.615850e-47 |
| Msa0095940 | Msa1221220 | 0.807319 | 5.358000e-50 | -8.615850e-47 |
| Msa0095940 | Msa1221270 | 0.837401 | 5.313337e-57 | -8.615850e-47 |
| Msa0095940 | Msa1234470 | 0.805467 | 1.316493e-49 | -8.615850e-47 |
| Msa0095940 | Msa1238190 | 0.806259 | 8.970860e-50 | -8.615850e-47 |
| Msa0095940 | Msa1238600 | 0.847677 | 9.942638e-60 | -8.615850e-47 |
| Msa0095940 | Msa1238660 | 0.800216 | 1.599290e-48 | -8.615850e-47 |
| Msa0095940 | Msa1239210 | 0.810611 | 1.057841e-50 | -8.615850e-47 |
| Msa0095940 | Msa1241740 | 0.817943 | 2.536193e-52 | -8.615850e-47 |
| Msa0095940 | Msa1248060 | 0.809426 | 1.903543e-50 | -8.615850e-47 |
| Msa0095940 | Msa1251440 | -0.814597 | 1.420523e-51 | -8.615850e-47 |
| Msa0095940 | Msa1254870 | 0.849559 | 2.991972e-60 | -8.615850e-47 |
| Msa0095940 | Msa1255210 | 0.807022 | 6.190714e-50 | -8.615850e-47 |
| Msa0095940 | Msa1255480 | -0.802914 | 4.475175e-49 | -8.615850e-47 |
| Msa0095940 | Msa1256060 | 0.838538 | 2.709937e-57 | -8.615850e-47 |
| Msa0095940 | Msa1262540 | 0.832225 | 1.067297e-55 | -8.615850e-47 |
| Msa0095940 | Msa1268390 | 0.816104 | 6.569046e-52 | -8.615850e-47 |
| Msa0095940 | Msa1268420 | 0.811670 | 6.233392e-51 | -8.615850e-47 |
| Msa0095940 | Msa1269060 | 0.818699 | 1.710229e-52 | -8.615850e-47 |
| Msa0095940 | Msa1269200 | 0.803727 | 3.035881e-49 | -8.615850e-47 |
| Msa0095940 | Msa1281690 | 0.805766 | 1.139364e-49 | -8.615850e-47 |
| Msa0095940 | Msa1289050 | 0.856106 | 4.026424e-62 | -8.615850e-47 |
| Msa0095940 | Msa1289090 | 0.864420 | 1.231712e-64 | -8.615850e-47 |
| Msa0095940 | Msa1296240 | 0.837842 | 4.093136e-57 | -8.615850e-47 |
| Msa0095940 | Msa1306960 | 0.817619 | 3.002270e-52 | -8.615850e-47 |
| Msa0095940 | Msa1307530 | 0.827378 | 1.617082e-54 | -8.615850e-47 |
| Msa0095940 | Msa1315480 | 0.834660 | 2.636224e-56 | -8.615850e-47 |
| Msa0095940 | Msa1320860 | 0.813964 | 1.960210e-51 | -8.615850e-47 |
| Msa0095940 | Msa1322170 | 0.800884 | 1.168898e-48 | -8.615850e-47 |
| Msa0095940 | Msa1323010 | 0.807877 | 4.077531e-50 | -8.615850e-47 |
| Msa0095940 | Msa1325560 | -0.808240 | 3.412542e-50 | -8.615850e-47 |
| Msa0095940 | Msa1328430 | 0.849833 | 2.508840e-60 | -8.615850e-47 |
| Msa0095940 | Msa1331570 | -0.808285 | 3.338392e-50 | -8.615850e-47 |
| Msa0095940 | Msa1357570 | 0.846449 | 2.156366e-59 | -8.615850e-47 |
| Msa0095940 | Msa1362850 | 0.806739 | 7.105927e-50 | -8.615850e-47 |
| Msa0095940 | Msa1367790 | 0.856371 | 3.365690e-62 | -8.615850e-47 |
| Msa0095940 | Msa1384700 | 0.800564 | 1.358448e-48 | -8.615850e-47 |
| Msa0095940 | Msa1386910 | -0.806411 | 8.334926e-50 | -8.615850e-47 |
| Msa0095940 | Msa1389170 | 0.800976 | 1.119555e-48 | -8.615850e-47 |
| Msa0095940 | Msa1393730 | 0.828947 | 6.771425e-55 | -8.615850e-47 |
| Msa0095940 | Msa1395110 | 0.814507 | 1.487243e-51 | -8.615850e-47 |
| Msa0095940 | Msa1395250 | 0.812845 | 3.454154e-51 | -8.615850e-47 |
| Msa0095940 | Msa1398140 | 0.822297 | 2.554263e-53 | -8.615850e-47 |
| Msa0095940 | Msa1398320 | 0.801020 | 1.096348e-48 | -8.615850e-47 |
| Msa0095940 | Msa1404050 | 0.985000 | 3.164710e-162 | -8.615850e-47 |
| Msa0095940 | Msa1405530 | 0.825645 | 4.186793e-54 | -8.615850e-47 |
| Msa0095940 | Msa1408230 | -0.800714 | 1.266023e-48 | -8.615850e-47 |
| Msa0095940 | Msa1410310 | 0.807439 | 5.052048e-50 | -8.615850e-47 |
| Msa0095940 | Msa1413800 | 0.819483 | 1.134398e-52 | -8.615850e-47 |
| Msa0095940 | Msa1415410 | 0.849583 | 2.945912e-60 | -8.615850e-47 |
| Msa0095940 | Msa1415510 | -0.806798 | 6.905462e-50 | -8.615850e-47 |
| Msa0095940 | Msa1433410 | 0.802196 | 6.290830e-49 | -8.615850e-47 |
| Msa0095940 | Msa1435320 | 0.818572 | 1.828108e-52 | -8.615850e-47 |
| Msa0095940 | Msa1436090 | 0.816481 | 5.407376e-52 | -8.615850e-47 |
| Msa0095940 | Msa1443400 | 0.820357 | 7.158639e-53 | -8.615850e-47 |
| Msa0095940 | Msa1447870 | 0.820603 | 6.287687e-53 | -8.615850e-47 |
| Msa0095940 | Msa1448040 | 0.820916 | 5.326697e-53 | -8.615850e-47 |
| Msa0095940 | Msa1450440 | 0.807395 | 5.162392e-50 | -8.615850e-47 |
| Msa0095940 | Msa1455200 | 0.812463 | 4.186243e-51 | -8.615850e-47 |
| Msa0095940 | Msa1455480 | 0.815307 | 9.888062e-52 | -8.615850e-47 |
| Msa0095940 | Msa1459920 | 0.803409 | 3.534629e-49 | -8.615850e-47 |
| Msa0095940 | Msa1461690 | 0.804422 | 2.177032e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0095940 | MtrunA17_Chr5g0398581 | 97.959 | 441 | 9 | 0 | 1 | 441 | 1 | 441 | 0.0 | 895 |
| Msa0095940 | MtrunA17_Chr4g0056741 | 77.098 | 441 | 101 | 0 | 1 | 441 | 1 | 441 | 0.0 | 724 |
| Msa0095940 | MtrunA17_Chr7g0222461 | 50.889 | 450 | 195 | 5 | 8 | 441 | 12 | 451 | 3.54e-151 | 437 |
| Msa0095940 | MtrunA17_Chr7g0224571 | 49.330 | 448 | 205 | 5 | 8 | 441 | 3 | 442 | 8.33e-147 | 425 |
| Msa0095940 | MtrunA17_Chr5g0420221 | 50.000 | 442 | 204 | 3 | 8 | 441 | 19 | 451 | 4.16e-146 | 424 |
| Msa0095940 | MtrunA17_Chr1g0159541 | 46.793 | 421 | 200 | 6 | 3 | 399 | 6 | 426 | 4.50e-128 | 378 |
| Msa0095940 | MtrunA17_Chr3g0125661 | 45.880 | 449 | 216 | 8 | 3 | 431 | 6 | 447 | 2.53e-127 | 376 |
| Msa0095940 | MtrunA17_Chr5g0400941 | 42.105 | 418 | 205 | 7 | 9 | 391 | 12 | 427 | 6.26e-107 | 325 |
| Msa0095940 | MtrunA17_Chr4g0054261 | 38.128 | 438 | 227 | 7 | 2 | 399 | 24 | 457 | 2.16e-90 | 283 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0095940 | AT1G12420.1 | 67.720 | 443 | 139 | 3 | 1 | 441 | 1 | 441 | 0.0 | 595 |
| Msa0095940 | AT4G22780.1 | 59.333 | 450 | 169 | 6 | 1 | 439 | 1 | 447 | 0.0 | 530 |
| Msa0095940 | AT4G22780.2 | 59.333 | 450 | 169 | 6 | 1 | 439 | 1 | 447 | 0.0 | 530 |
| Msa0095940 | AT1G12420.2 | 67.116 | 371 | 118 | 3 | 73 | 441 | 1 | 369 | 5.52e-175 | 494 |
| Msa0095940 | AT1G69040.1 | 48.780 | 451 | 206 | 5 | 8 | 441 | 9 | 451 | 1.57e-146 | 425 |
| Msa0095940 | AT1G69040.2 | 48.780 | 451 | 206 | 5 | 8 | 441 | 13 | 455 | 2.00e-146 | 425 |
| Msa0095940 | AT3G01990.7 | 52.163 | 393 | 178 | 3 | 8 | 391 | 18 | 409 | 3.71e-138 | 404 |
| Msa0095940 | AT3G01990.5 | 52.163 | 393 | 178 | 3 | 8 | 391 | 18 | 409 | 3.71e-138 | 404 |
| Msa0095940 | AT3G01990.11 | 52.163 | 393 | 178 | 3 | 8 | 391 | 4 | 395 | 4.89e-138 | 403 |
| Msa0095940 | AT3G01990.10 | 52.163 | 393 | 178 | 3 | 8 | 391 | 4 | 395 | 5.22e-138 | 403 |
| Msa0095940 | AT3G01990.1 | 52.163 | 393 | 178 | 3 | 8 | 391 | 4 | 395 | 5.22e-138 | 403 |
| Msa0095940 | AT3G01990.6 | 52.163 | 393 | 178 | 3 | 8 | 391 | 18 | 409 | 5.74e-138 | 403 |
| Msa0095940 | AT1G76990.4 | 45.759 | 448 | 218 | 7 | 3 | 431 | 6 | 447 | 4.34e-132 | 389 |
| Msa0095940 | AT1G76990.5 | 45.759 | 448 | 218 | 7 | 3 | 431 | 6 | 447 | 4.34e-132 | 389 |
| Msa0095940 | AT1G76990.2 | 45.759 | 448 | 218 | 7 | 3 | 431 | 6 | 447 | 4.34e-132 | 389 |
| Msa0095940 | AT1G76990.3 | 45.759 | 448 | 218 | 7 | 3 | 431 | 6 | 447 | 4.34e-132 | 389 |
| Msa0095940 | AT1G76990.1 | 45.759 | 448 | 218 | 7 | 3 | 431 | 6 | 447 | 4.34e-132 | 389 |
| Msa0095940 | AT2G03730.2 | 47.253 | 455 | 206 | 8 | 8 | 439 | 13 | 456 | 2.72e-131 | 387 |
| Msa0095940 | AT2G03730.1 | 47.253 | 455 | 206 | 8 | 8 | 439 | 13 | 456 | 2.72e-131 | 387 |
| Msa0095940 | AT3G01990.4 | 51.220 | 328 | 150 | 3 | 8 | 326 | 18 | 344 | 8.79e-109 | 325 |
| Msa0095940 | AT3G01990.9 | 51.220 | 328 | 150 | 3 | 8 | 326 | 4 | 330 | 1.13e-108 | 324 |
| Msa0095940 | AT5G25320.1 | 38.739 | 444 | 221 | 7 | 3 | 396 | 6 | 448 | 4.23e-108 | 329 |
| Msa0095940 | AT3G01990.2 | 51.393 | 323 | 147 | 3 | 8 | 321 | 18 | 339 | 1.39e-107 | 322 |
| Msa0095940 | AT5G25320.3 | 39.024 | 410 | 201 | 6 | 35 | 396 | 1 | 409 | 2.70e-102 | 312 |
| Msa0095940 | AT5G65890.1 | 39.192 | 421 | 223 | 4 | 4 | 391 | 8 | 428 | 5.39e-99 | 305 |
| Msa0095940 | AT5G65890.3 | 39.192 | 421 | 223 | 4 | 4 | 391 | 8 | 428 | 5.39e-99 | 305 |
| Msa0095940 | AT5G65890.4 | 38.933 | 375 | 196 | 4 | 50 | 391 | 2 | 376 | 4.74e-88 | 275 |
| Msa0095940 | AT5G65890.2 | 38.933 | 375 | 196 | 4 | 50 | 391 | 2 | 376 | 4.74e-88 | 275 |
| Msa0095940 | AT3G01990.8 | 48.780 | 287 | 137 | 3 | 8 | 285 | 4 | 289 | 7.17e-86 | 265 |
| Msa0095940 | AT3G01990.3 | 48.780 | 287 | 137 | 3 | 8 | 285 | 18 | 303 | 7.82e-86 | 265 |
| Msa0095940 | AT5G25320.2 | 37.669 | 369 | 179 | 7 | 3 | 321 | 6 | 373 | 1.60e-83 | 261 |
| Msa0095940 | AT5G65890.5 | 38.514 | 296 | 164 | 2 | 114 | 391 | 19 | 314 | 1.41e-67 | 220 |
| Msa0095940 | AT2G39570.1 | 25.430 | 291 | 192 | 11 | 32 | 305 | 20 | 302 | 1.04e-11 | 67.0 |
Find 98 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTCTGGTTCTGAACTAAT+TGG | 0.190192 | 1_3:-1394119 | None:intergenic |
| AACCCCTTTCTGCCCAATTC+TGG | 0.223295 | 1_3:-1393842 | None:intergenic |
| TATGTTAAAGACTGCGATTC+TGG | 0.254803 | 1_3:+1393606 | Msa0095940:CDS |
| AAGTTTAGAATGATGGAATT+TGG | 0.265152 | 1_3:+1394701 | Msa0095940:three_prime_UTR |
| CAGAATTGGACAGAACAAAT+TGG | 0.271471 | 1_3:+1394819 | Msa0095940:three_prime_UTR |
| GAGAAGGAATCTGTATAGTT+TGG | 0.274326 | 1_3:+1394597 | Msa0095940:CDS |
| TTCCACATCACTCATCAAAA+TGG | 0.335568 | 1_3:+1393269 | Msa0095940:CDS |
| CTTCTGCCTAACAGACTCTA+TGG | 0.349251 | 1_3:-1394455 | None:intergenic |
| CTCACTGCGCTTGAATTATC+AGG | 0.356914 | 1_3:+1393471 | Msa0095940:CDS |
| GTAATACAGAATTGGATTCT+TGG | 0.358541 | 1_3:+1394772 | Msa0095940:three_prime_UTR |
| AATATGAAAAGCTCTTAATA+AGG | 0.358985 | 1_3:+1392190 | Msa0095940:CDS |
| CTGTAGTGACGGTCCAGAAT+TGG | 0.362155 | 1_3:+1393829 | Msa0095940:CDS |
| TTGGTTACTATTTGTGTTGA+TGG | 0.365674 | 1_3:-1393961 | None:intergenic |
| TGAATTACGCGTTGTCGCTC+TGG | 0.374088 | 1_3:-1394134 | None:intergenic |
| GCTCTGGTTCTGAACTAATT+GGG | 0.377900 | 1_3:-1394118 | None:intergenic |
| GGTGCAGTGCTATGGTCTAT+TGG | 0.392338 | 1_3:+1394565 | Msa0095940:CDS |
| TCTATGGTTGTTGGATCAGC+TGG | 0.393817 | 1_3:-1394439 | None:intergenic |
| AGAAGGAATCTGTATAGTTT+GGG | 0.393916 | 1_3:+1394598 | Msa0095940:CDS |
| ATTGGGTTCATTGTTCATCT+AGG | 0.394563 | 1_3:+1394837 | Msa0095940:three_prime_UTR |
| AGATGAAAGTAATACAGAAT+TGG | 0.398079 | 1_3:+1394764 | Msa0095940:three_prime_UTR |
| GTGCAGTGCTATGGTCTATT+GGG | 0.398825 | 1_3:+1394566 | Msa0095940:CDS |
| TCATTGTTCATCTAGGACTT+TGG | 0.412217 | 1_3:+1394844 | Msa0095940:three_prime_UTR |
| GACCGTCACTACAGTGTTAT+CGG | 0.418171 | 1_3:-1393820 | None:intergenic |
| AACTTAGTTTGAGTTAGTTA+AGG | 0.427624 | 1_3:+1392051 | Msa0095940:five_prime_UTR |
| TTCTGATGGCAAATGGTTCA+TGG | 0.431070 | 1_3:+1393129 | Msa0095940:CDS |
| AATAGTGGTTCTAGTTGGTT+TGG | 0.434881 | 1_3:+1394732 | Msa0095940:three_prime_UTR |
| TAAGGTTGTTTGTGACGATT+TGG | 0.436535 | 1_3:+1392069 | Msa0095940:five_prime_UTR |
| GAGGATCAAACAGTTGGAAT+TGG | 0.438200 | 1_3:+1394541 | Msa0095940:CDS |
| TGTAGTGACGGTCCAGAATT+GGG | 0.443034 | 1_3:+1393830 | Msa0095940:CDS |
| GGTCCAGAATTGGGCAGAAA+GGG | 0.446856 | 1_3:+1393839 | Msa0095940:CDS |
| AACAAAGCGTGCTTTGTGTC+AGG | 0.447392 | 1_3:+1391982 | Msa0095940:five_prime_UTR |
| GTGGTTCTAGTTGGTTTGGT+AGG | 0.447704 | 1_3:+1394736 | Msa0095940:three_prime_UTR |
| AAATAGTAACCAAGCTTACT+TGG | 0.448187 | 1_3:+1393971 | Msa0095940:CDS |
| TTTCTGAGAATCCTCAATAG+TGG | 0.448253 | 1_3:-1393631 | None:intergenic |
| ATATATCTTCTGATGGCAAA+TGG | 0.450984 | 1_3:+1393122 | Msa0095940:CDS |
| ATGCGAACCTTCCGAGAGAA+TGG | 0.453096 | 1_3:+1394334 | Msa0095940:CDS |
| AGAATTGGACAGAACAAATT+GGG | 0.460902 | 1_3:+1394820 | Msa0095940:three_prime_UTR |
| AAGCGCAGTGAGACCGTTTG+AGG | 0.464728 | 1_3:-1393460 | None:intergenic |
| ATCGGAAGTAAGCTTGAGAA+TGG | 0.464732 | 1_3:-1393802 | None:intergenic |
| CATGGAGTGGCCAGCATGTA+CGG | 0.465567 | 1_3:+1392164 | Msa0095940:exon |
| CGTGTGCTCTACTGCTACTC+TGG | 0.478413 | 1_3:+1392907 | Msa0095940:CDS |
| TTCAAGCAATTTAGAAGTGA+AGG | 0.478862 | 1_3:+1394483 | Msa0095940:CDS |
| CGGTCCAGAATTGGGCAGAA+AGG | 0.486596 | 1_3:+1393838 | Msa0095940:CDS |
| CATAGATAGAAAGAAAGTAT+TGG | 0.488138 | 1_3:+1392013 | Msa0095940:five_prime_UTR |
| AATTTGGTTATAGTTAATAG+TGG | 0.489515 | 1_3:+1394717 | Msa0095940:three_prime_UTR |
| CTAACAGACTCTATGGTTGT+TGG | 0.492579 | 1_3:-1394448 | None:intergenic |
| CAACAACCATAGAGTCTGTT+AGG | 0.493077 | 1_3:+1394449 | Msa0095940:CDS |
| GTGAGAACTAATTCCTCAAA+CGG | 0.503230 | 1_3:+1393447 | Msa0095940:CDS |
| TTCTATGTAACAGACGTGAC+TGG | 0.504956 | 1_3:+1394412 | Msa0095940:CDS |
| TAGTTAATAGTGGTTCTAGT+TGG | 0.509035 | 1_3:+1394727 | Msa0095940:three_prime_UTR |
| TAATAATTACCAAGTAAGCT+TGG | 0.509666 | 1_3:-1393980 | None:intergenic |
| TCAATGTTTAAAAGCTTCTG+TGG | 0.509902 | 1_3:+1394154 | Msa0095940:CDS |
| TAAAAGCTTCTGTGGAGAGA+AGG | 0.512503 | 1_3:+1394162 | Msa0095940:CDS |
| GAGTCTGTTAGGCAGAAGAT+TGG | 0.515644 | 1_3:+1394460 | Msa0095940:CDS |
| GTCTTCTGATGATAAATCAA+TGG | 0.517572 | 1_3:-1394511 | None:intergenic |
| GAGAGAGAGGATCAAACAGT+TGG | 0.521675 | 1_3:+1394535 | Msa0095940:CDS |
| TCATATTCATCCGTACATGC+TGG | 0.524946 | 1_3:-1392174 | None:intergenic |
| AACAGGTTATTAGTGCAAGA+AGG | 0.528541 | 1_3:+1393035 | Msa0095940:intron |
| TAACATTAAGCCCATTCTCT+CGG | 0.533741 | 1_3:-1394345 | None:intergenic |
| TGCGAACCTTCCGAGAGAAT+GGG | 0.534209 | 1_3:+1394335 | Msa0095940:CDS |
| CGATTCTGGATCCACTATTG+AGG | 0.535668 | 1_3:+1393620 | Msa0095940:CDS |
| GTTATTAGTGCAAGAAGGAA+TGG | 0.538576 | 1_3:+1393040 | Msa0095940:CDS |
| AAAAGCTTCTGTGGAGAGAA+GGG | 0.546145 | 1_3:+1394163 | Msa0095940:CDS |
| CTGTTATGCATAGCGAAAGA+AGG | 0.550135 | 1_3:+1393736 | Msa0095940:CDS |
| CTCTGGTTCTGAACTAATTG+GGG | 0.551910 | 1_3:-1394117 | None:intergenic |
| ACATTGAAGATCAGCAAGTA+CGG | 0.553801 | 1_3:-1393529 | None:intergenic |
| CTCTACTGCTACTCTGGTCA+AGG | 0.554798 | 1_3:+1392913 | Msa0095940:CDS |
| AATCAAACTATTATTTGATG+TGG | 0.555718 | 1_3:+1393896 | Msa0095940:CDS |
| CGTTGTGAATGTTCAGTGCA+AGG | 0.556887 | 1_3:+1393869 | Msa0095940:CDS |
| GAATTGGCGGTGCAGTGCTA+TGG | 0.557823 | 1_3:+1394557 | Msa0095940:CDS |
| ATTAAGCCCATTCTCTCGGA+AGG | 0.564565 | 1_3:-1394341 | None:intergenic |
| ATACAGAATTGGATTCTTGG+TGG | 0.565015 | 1_3:+1394775 | Msa0095940:three_prime_UTR |
| CGACAGAAGACCAACTCTAT+CGG | 0.565281 | 1_3:-1393496 | None:intergenic |
| AAGGCTTATATATCTTCTGA+TGG | 0.568126 | 1_3:+1393115 | Msa0095940:CDS |
| TCGGAAGTAAGCTTGAGAAT+GGG | 0.570198 | 1_3:-1393801 | None:intergenic |
| GATCAAACAGTTGGAATTGG+CGG | 0.574407 | 1_3:+1394544 | Msa0095940:CDS |
| CTATTGGGAGCCTTGTGAGA+AGG | 0.589228 | 1_3:+1394581 | Msa0095940:CDS |
| CAGAGTAGCAGTAGAGCACA+CGG | 0.589491 | 1_3:-1392906 | None:intergenic |
| CGATAGAGTTGGTCTTCTGT+CGG | 0.600658 | 1_3:+1393497 | Msa0095940:CDS |
| TCATCAGAAGACAGAGAGAG+AGG | 0.602288 | 1_3:+1394522 | Msa0095940:CDS |
| TGTGGAGAGAAGGGCATCTG+AGG | 0.606335 | 1_3:+1394172 | Msa0095940:CDS |
| TTATCAGGAACCGATAGAGT+TGG | 0.606433 | 1_3:+1393486 | Msa0095940:CDS |
| TTCCGATAACACTGTAGTGA+CGG | 0.607402 | 1_3:+1393818 | Msa0095940:CDS |
| ATGTGATGTTGATGAAGCTA+AGG | 0.612154 | 1_3:+1393548 | Msa0095940:CDS |
| TAGAGTTGGTCTTCTGTCGG+AGG | 0.616833 | 1_3:+1393500 | Msa0095940:CDS |
| TATGCACAGAAGACAAGCAA+GGG | 0.636043 | 1_3:+1394296 | Msa0095940:CDS |
| GTCCAGAATTGGGCAGAAAG+GGG | 0.639703 | 1_3:+1393840 | Msa0095940:CDS |
| GTCTTTAACATAGATCAAAG+AGG | 0.646875 | 1_3:-1393595 | None:intergenic |
| TTATGCACAGAAGACAAGCA+AGG | 0.649693 | 1_3:+1394295 | Msa0095940:CDS |
| GATATCCACCATAGAAAACA+TGG | 0.649833 | 1_3:+1394378 | Msa0095940:CDS |
| TAATAAGGATGAGCACACCC+AGG | 0.655035 | 1_3:+1392205 | Msa0095940:CDS |
| TCGCTGATCGTGACTACGAG+AGG | 0.665248 | 1_3:+1393775 | Msa0095940:CDS |
| TATACAGATTCCTTCTCACA+AGG | 0.668041 | 1_3:-1394591 | None:intergenic |
| GATGGCAAATGGTTCATGGA+TGG | 0.678400 | 1_3:+1393133 | Msa0095940:CDS |
| GCTAAGGTGTGGACTCACAA+CGG | 0.682427 | 1_3:+1393564 | Msa0095940:CDS |
| GGTATGCAATTTGACAGACA+TGG | 0.693118 | 1_3:+1393917 | Msa0095940:CDS |
| ATGTTGATGAAGCTAAGGTG+TGG | 0.721366 | 1_3:+1393553 | Msa0095940:CDS |
| CTTGCACTGAACATTCACAA+CGG | 0.736879 | 1_3:-1393868 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAACTAAAGAAAATCT+AGG | - | chr1_3:1392534-1392553 | None:intergenic | 15.0% |
| !!! | TCTTAATCTTTTAATTAAGA+AGG | + | chr1_3:1393096-1393115 | Msa0095940:CDS | 15.0% |
| !! | TTTAGTTACATATTTACATT+TGG | + | chr1_3:1393229-1393248 | Msa0095940:intron | 15.0% |
| !!! | CATTTTAAAATATATAGAAC+AGG | + | chr1_3:1393313-1393332 | Msa0095940:CDS | 15.0% |
| !! | ATCAATATTAACATTATATG+TGG | - | chr1_3:1393371-1393390 | None:intergenic | 15.0% |
| !!! | TGATCTTTAATCTTAATTTT+CGG | + | chr1_3:1393387-1393406 | Msa0095940:intron | 15.0% |
| !! | TTCAAATCATTAATTATTTC+AGG | + | chr1_3:1394067-1394086 | Msa0095940:intron | 15.0% |
| !! | AATATGAAAAGCTCTTAATA+AGG | + | chr1_3:1392190-1392209 | Msa0095940:CDS | 20.0% |
| !! | TCATTCAAAATATTTGATCA+AGG | - | chr1_3:1392339-1392358 | None:intergenic | 20.0% |
| !!! | CTATTTTTATGTGTTGTTTT+TGG | + | chr1_3:1392561-1392580 | Msa0095940:intron | 20.0% |
| !!! | TTCATTTTAATATCTCCAAA+TGG | + | chr1_3:1392673-1392692 | Msa0095940:intron | 20.0% |
| !!! | ATTCTTTATGGAAAGAATTT+TGG | - | chr1_3:1392950-1392969 | None:intergenic | 20.0% |
| !!! | TATGACAAATTGATTCTTTA+TGG | - | chr1_3:1392962-1392981 | None:intergenic | 20.0% |
| !!! | TCTTTTTTGATCAAATTAAC+AGG | + | chr1_3:1393018-1393037 | Msa0095940:intron | 20.0% |
| !! | AATCAAACTATTATTTGATG+TGG | + | chr1_3:1393896-1393915 | Msa0095940:CDS | 20.0% |
| !!! | AATATTCTTTGCTTAGTTTT+TGG | + | chr1_3:1394663-1394682 | Msa0095940:three_prime_UTR | 20.0% |
| !!! | ATATTCTTTGCTTAGTTTTT+GGG | + | chr1_3:1394664-1394683 | Msa0095940:three_prime_UTR | 20.0% |
| !!! | ACATAAAAAGTTTAGAATGA+TGG | + | chr1_3:1394694-1394713 | Msa0095940:three_prime_UTR | 20.0% |
| !! | AATTTGGTTATAGTTAATAG+TGG | + | chr1_3:1394717-1394736 | Msa0095940:three_prime_UTR | 20.0% |
| !! | CATAGATAGAAAGAAAGTAT+TGG | + | chr1_3:1392013-1392032 | Msa0095940:five_prime_UTR | 25.0% |
| !! | AACTTAGTTTGAGTTAGTTA+AGG | + | chr1_3:1392051-1392070 | Msa0095940:five_prime_UTR | 25.0% |
| !! | ATCATGTAGTTTATACGTTT+TGG | + | chr1_3:1392245-1392264 | Msa0095940:intron | 25.0% |
| ! | GATCAAGGAGTAAATAAAAT+TGG | - | chr1_3:1392324-1392343 | None:intergenic | 25.0% |
| ! | TGTTTCAACATATATGTTGT+AGG | - | chr1_3:1392363-1392382 | None:intergenic | 25.0% |
| ! | AACTAAAGAAAATCTAGGTT+GGG | - | chr1_3:1392529-1392548 | None:intergenic | 25.0% |
| ! | AAACTAAAGAAAATCTAGGT+TGG | - | chr1_3:1392530-1392549 | None:intergenic | 25.0% |
| !!! | TTTATGGAAAGAATTTTGGT+AGG | - | chr1_3:1392946-1392965 | None:intergenic | 25.0% |
| ! | TAATAATTACCAAGTAAGCT+TGG | - | chr1_3:1393983-1394002 | None:intergenic | 25.0% |
| !! | TTTTATATAAGACACAAGGA+TGG | + | chr1_3:1394092-1394111 | Msa0095940:CDS | 25.0% |
| ! | TTTATTATGACCTTTGCTTA+AGG | + | chr1_3:1394217-1394236 | Msa0095940:intron | 25.0% |
| ! | ATTGTTAATCGTGTGATTAT+AGG | + | chr1_3:1394258-1394277 | Msa0095940:intron | 25.0% |
| ! | TTGTTAATCGTGTGATTATA+GGG | + | chr1_3:1394259-1394278 | Msa0095940:intron | 25.0% |
| !! | AAGTTTAGAATGATGGAATT+TGG | + | chr1_3:1394701-1394720 | Msa0095940:three_prime_UTR | 25.0% |
| ! | AGATGAAAGTAATACAGAAT+TGG | + | chr1_3:1394764-1394783 | Msa0095940:three_prime_UTR | 25.0% |
| TGATACCACAAAGAAAAACA+TGG | + | chr1_3:1392146-1392165 | Msa0095940:exon | 30.0% | |
| CAAGGAAAATTAACAAACCT+GGG | - | chr1_3:1392225-1392244 | None:intergenic | 30.0% | |
| TCAAGGAAAATTAACAAACC+TGG | - | chr1_3:1392226-1392245 | None:intergenic | 30.0% | |
| ACGTATAAACTACATGATCA+AGG | - | chr1_3:1392243-1392262 | None:intergenic | 30.0% | |
| GGATTGATCTTAAATACTCT+AGG | + | chr1_3:1392266-1392285 | Msa0095940:intron | 30.0% | |
| GGATCGAATTAAGAATGAAA+TGG | - | chr1_3:1392416-1392435 | None:intergenic | 30.0% | |
| TCATTCTTAATTCGATCCAT+CGG | + | chr1_3:1392418-1392437 | Msa0095940:intron | 30.0% | |
| GTAACTTAGATTCATTCAAG+GGG | - | chr1_3:1392479-1392498 | None:intergenic | 30.0% | |
| GGTAACTTAGATTCATTCAA+GGG | - | chr1_3:1392480-1392499 | None:intergenic | 30.0% | |
| AGGTAACTTAGATTCATTCA+AGG | - | chr1_3:1392481-1392500 | None:intergenic | 30.0% | |
| TCAAAAAAAATTGTTCCTCG+AGG | - | chr1_3:1392501-1392520 | None:intergenic | 30.0% | |
| TTGTTGAAATAAACTTCTGC+TGG | - | chr1_3:1392598-1392617 | None:intergenic | 30.0% | |
| AAACTGAATTATTGCAACCA+AGG | - | chr1_3:1392651-1392670 | None:intergenic | 30.0% | |
| TACACATTATTGATGCCATT+TGG | - | chr1_3:1392691-1392710 | None:intergenic | 30.0% | |
| AGTGGACATATCAATTACAA+TGG | - | chr1_3:1392726-1392745 | None:intergenic | 30.0% | |
| AAGGCTTATATATCTTCTGA+TGG | + | chr1_3:1393115-1393134 | Msa0095940:CDS | 30.0% | |
| ATATATCTTCTGATGGCAAA+TGG | + | chr1_3:1393122-1393141 | Msa0095940:CDS | 30.0% | |
| GTCATATCGAAAAGTTCAAA+AGG | - | chr1_3:1393177-1393196 | None:intergenic | 30.0% | |
| GTCTTTAACATAGATCAAAG+AGG | - | chr1_3:1393598-1393617 | None:intergenic | 30.0% | |
| !! | CGTTTAAGAAACGTTTTGAA+GGG | + | chr1_3:1393672-1393691 | Msa0095940:CDS | 30.0% |
| TTGGTTACTATTTGTGTTGA+TGG | - | chr1_3:1393964-1393983 | None:intergenic | 30.0% | |
| AAATAGTAACCAAGCTTACT+TGG | + | chr1_3:1393971-1393990 | Msa0095940:CDS | 30.0% | |
| CAAACATATACTGAACTTCA+TGG | - | chr1_3:1394015-1394034 | None:intergenic | 30.0% | |
| !! | GGAGTTTTATATAAGACACA+AGG | + | chr1_3:1394088-1394107 | Msa0095940:intron | 30.0% |
| TCAATGTTTAAAAGCTTCTG+TGG | + | chr1_3:1394154-1394173 | Msa0095940:CDS | 30.0% | |
| ! | ATTTGTAGCCATGTTTTCTA+TGG | - | chr1_3:1394389-1394408 | None:intergenic | 30.0% |
| TTCAAGCAATTTAGAAGTGA+AGG | + | chr1_3:1394483-1394502 | Msa0095940:CDS | 30.0% | |
| GTCTTCTGATGATAAATCAA+TGG | - | chr1_3:1394514-1394533 | None:intergenic | 30.0% | |
| AGAAGGAATCTGTATAGTTT+GGG | + | chr1_3:1394598-1394617 | Msa0095940:CDS | 30.0% | |
| !! | TAGTTAATAGTGGTTCTAGT+TGG | + | chr1_3:1394727-1394746 | Msa0095940:three_prime_UTR | 30.0% |
| GTAATACAGAATTGGATTCT+TGG | + | chr1_3:1394772-1394791 | Msa0095940:three_prime_UTR | 30.0% | |
| !! | ACAACTTTTAGGTACAGAAT+TGG | + | chr1_3:1394805-1394824 | Msa0095940:three_prime_UTR | 30.0% |
| AGAATTGGACAGAACAAATT+GGG | + | chr1_3:1394820-1394839 | Msa0095940:three_prime_UTR | 30.0% | |
| TAAGGTTGTTTGTGACGATT+TGG | + | chr1_3:1392069-1392088 | Msa0095940:five_prime_UTR | 35.0% | |
| AATGAATCTAAGTTACCTCG+AGG | + | chr1_3:1392483-1392502 | Msa0095940:intron | 35.0% | |
| GAATGTTCTTTGTCTATGAC+CGG | + | chr1_3:1392622-1392641 | Msa0095940:intron | 35.0% | |
| !! | GGTCAAAAAGCATCAGAATT+GGG | - | chr1_3:1392853-1392872 | None:intergenic | 35.0% |
| !! | AGGTCAAAAAGCATCAGAAT+TGG | - | chr1_3:1392854-1392873 | None:intergenic | 35.0% |
| TTGACCTTTGTGTATGAAAC+AGG | + | chr1_3:1392867-1392886 | Msa0095940:intron | 35.0% | |
| TGACCTTTGTGTATGAAACA+GGG | + | chr1_3:1392868-1392887 | Msa0095940:intron | 35.0% | |
| AACAGGTTATTAGTGCAAGA+AGG | + | chr1_3:1393035-1393054 | Msa0095940:intron | 35.0% | |
| GTTATTAGTGCAAGAAGGAA+TGG | + | chr1_3:1393040-1393059 | Msa0095940:CDS | 35.0% | |
| TTCCACATCACTCATCAAAA+TGG | + | chr1_3:1393269-1393288 | Msa0095940:CDS | 35.0% | |
| !! | TTCCATTTTGATGAGTGATG+TGG | - | chr1_3:1393274-1393293 | None:intergenic | 35.0% |
| GTGAGAACTAATTCCTCAAA+CGG | + | chr1_3:1393447-1393466 | Msa0095940:CDS | 35.0% | |
| ACATTGAAGATCAGCAAGTA+CGG | - | chr1_3:1393532-1393551 | None:intergenic | 35.0% | |
| ! | ATGTGATGTTGATGAAGCTA+AGG | + | chr1_3:1393548-1393567 | Msa0095940:CDS | 35.0% |
| TATGTTAAAGACTGCGATTC+TGG | + | chr1_3:1393606-1393625 | Msa0095940:CDS | 35.0% | |
| ! | TTTCTGAGAATCCTCAATAG+TGG | - | chr1_3:1393634-1393653 | None:intergenic | 35.0% |
| ! | GCGTTTAAGAAACGTTTTGA+AGG | + | chr1_3:1393671-1393690 | Msa0095940:CDS | 35.0% |
| CATATACTGAACTTCATGGA+AGG | - | chr1_3:1394011-1394030 | None:intergenic | 35.0% | |
| CTTAACTACTCCTTAAGCAA+AGG | - | chr1_3:1394230-1394249 | None:intergenic | 35.0% | |
| TAACATTAAGCCCATTCTCT+CGG | - | chr1_3:1394348-1394367 | None:intergenic | 35.0% | |
| !!! | GTTTTCTATGGTGGATATCT+CGG | - | chr1_3:1394377-1394396 | None:intergenic | 35.0% |
| GATATCCACCATAGAAAACA+TGG | + | chr1_3:1394378-1394397 | Msa0095940:CDS | 35.0% | |
| TATACAGATTCCTTCTCACA+AGG | - | chr1_3:1394594-1394613 | None:intergenic | 35.0% | |
| GAGAAGGAATCTGTATAGTT+TGG | + | chr1_3:1394597-1394616 | Msa0095940:CDS | 35.0% | |
| !! | AATAGTGGTTCTAGTTGGTT+TGG | + | chr1_3:1394732-1394751 | Msa0095940:three_prime_UTR | 35.0% |
| ATACAGAATTGGATTCTTGG+TGG | + | chr1_3:1394775-1394794 | Msa0095940:three_prime_UTR | 35.0% | |
| CAGAATTGGACAGAACAAAT+TGG | + | chr1_3:1394819-1394838 | Msa0095940:three_prime_UTR | 35.0% | |
| ATTGGGTTCATTGTTCATCT+AGG | + | chr1_3:1394837-1394856 | Msa0095940:three_prime_UTR | 35.0% | |
| ! | TCATTGTTCATCTAGGACTT+TGG | + | chr1_3:1394844-1394863 | Msa0095940:three_prime_UTR | 35.0% |
| ! | CCACTCCATGTTTTTCTTTG+TGG | - | chr1_3:1392154-1392173 | None:intergenic | 40.0% |
| CCACAAAGAAAAACATGGAG+TGG | + | chr1_3:1392151-1392170 | Msa0095940:exon | 40.0% | |
| TCATATTCATCCGTACATGC+TGG | - | chr1_3:1392177-1392196 | None:intergenic | 40.0% | |
| TTCTTAATTCGATCCATCGG+TGG | + | chr1_3:1392421-1392440 | Msa0095940:intron | 40.0% | |
| ATTATTGCAACCAAGGCAAC+CGG | - | chr1_3:1392644-1392663 | None:intergenic | 40.0% | |
| !! | GGAACATAGACGTTCTAGAA+GGG | - | chr1_3:1392832-1392851 | None:intergenic | 40.0% |
| CAACCCTGTTTCATACACAA+AGG | - | chr1_3:1392874-1392893 | None:intergenic | 40.0% | |
| TTCTGATGGCAAATGGTTCA+TGG | + | chr1_3:1393129-1393148 | Msa0095940:CDS | 40.0% | |
| ! | TGTATTTTGCAACAGTCGCT+TGG | + | chr1_3:1393411-1393430 | Msa0095940:intron | 40.0% |
| ! | GTATTTTGCAACAGTCGCTT+GGG | + | chr1_3:1393412-1393431 | Msa0095940:intron | 40.0% |
| TTATCAGGAACCGATAGAGT+TGG | + | chr1_3:1393486-1393505 | Msa0095940:CDS | 40.0% | |
| ! | ATGTTGATGAAGCTAAGGTG+TGG | + | chr1_3:1393553-1393572 | Msa0095940:CDS | 40.0% |
| CTGTTATGCATAGCGAAAGA+AGG | + | chr1_3:1393736-1393755 | Msa0095940:CDS | 40.0% | |
| TCGGAAGTAAGCTTGAGAAT+GGG | - | chr1_3:1393804-1393823 | None:intergenic | 40.0% | |
| ATCGGAAGTAAGCTTGAGAA+TGG | - | chr1_3:1393805-1393824 | None:intergenic | 40.0% | |
| TTCCGATAACACTGTAGTGA+CGG | + | chr1_3:1393818-1393837 | Msa0095940:CDS | 40.0% | |
| CTTGCACTGAACATTCACAA+CGG | - | chr1_3:1393871-1393890 | None:intergenic | 40.0% | |
| GGTATGCAATTTGACAGACA+TGG | + | chr1_3:1393917-1393936 | Msa0095940:CDS | 40.0% | |
| !! | CTCTGGTTCTGAACTAATTG+GGG | - | chr1_3:1394120-1394139 | None:intergenic | 40.0% |
| !! | GCTCTGGTTCTGAACTAATT+GGG | - | chr1_3:1394121-1394140 | None:intergenic | 40.0% |
| TAAAAGCTTCTGTGGAGAGA+AGG | + | chr1_3:1394162-1394181 | Msa0095940:CDS | 40.0% | |
| AAAAGCTTCTGTGGAGAGAA+GGG | + | chr1_3:1394163-1394182 | Msa0095940:CDS | 40.0% | |
| TTATGCACAGAAGACAAGCA+AGG | + | chr1_3:1394295-1394314 | Msa0095940:CDS | 40.0% | |
| TATGCACAGAAGACAAGCAA+GGG | + | chr1_3:1394296-1394315 | Msa0095940:CDS | 40.0% | |
| ! | TGTAGCCATGTTTTCTATGG+TGG | - | chr1_3:1394386-1394405 | None:intergenic | 40.0% |
| TTCTATGTAACAGACGTGAC+TGG | + | chr1_3:1394412-1394431 | Msa0095940:CDS | 40.0% | |
| CTAACAGACTCTATGGTTGT+TGG | - | chr1_3:1394451-1394470 | None:intergenic | 40.0% | |
| CAACAACCATAGAGTCTGTT+AGG | + | chr1_3:1394449-1394468 | Msa0095940:CDS | 40.0% | |
| GAGGATCAAACAGTTGGAAT+TGG | + | chr1_3:1394541-1394560 | Msa0095940:CDS | 40.0% | |
| GATCAAACAGTTGGAATTGG+CGG | + | chr1_3:1394544-1394563 | Msa0095940:CDS | 40.0% | |
| ! | GTGGCTGATAGACAACTTTT+AGG | + | chr1_3:1394794-1394813 | Msa0095940:three_prime_UTR | 40.0% |
| AACAAAGCGTGCTTTGTGTC+AGG | + | chr1_3:1391982-1392001 | Msa0095940:five_prime_UTR | 45.0% | |
| TAATAAGGATGAGCACACCC+AGG | + | chr1_3:1392205-1392224 | Msa0095940:CDS | 45.0% | |
| ATTTCTACACACACCACCGA+TGG | - | chr1_3:1392437-1392456 | None:intergenic | 45.0% | |
| ! | GGGAACATAGACGTTCTAGA+AGG | - | chr1_3:1392833-1392852 | None:intergenic | 45.0% |
| GATGGCAAATGGTTCATGGA+TGG | + | chr1_3:1393133-1393152 | Msa0095940:CDS | 45.0% | |
| CTCACTGCGCTTGAATTATC+AGG | + | chr1_3:1393471-1393490 | Msa0095940:CDS | 45.0% | |
| CGACAGAAGACCAACTCTAT+CGG | - | chr1_3:1393499-1393518 | None:intergenic | 45.0% | |
| !! | CGATAGAGTTGGTCTTCTGT+CGG | + | chr1_3:1393497-1393516 | Msa0095940:CDS | 45.0% |
| CGATTCTGGATCCACTATTG+AGG | + | chr1_3:1393620-1393639 | Msa0095940:CDS | 45.0% | |
| GACCGTCACTACAGTGTTAT+CGG | - | chr1_3:1393823-1393842 | None:intergenic | 45.0% | |
| TGTAGTGACGGTCCAGAATT+GGG | + | chr1_3:1393830-1393849 | Msa0095940:CDS | 45.0% | |
| CGTTGTGAATGTTCAGTGCA+AGG | + | chr1_3:1393869-1393888 | Msa0095940:CDS | 45.0% | |
| !! | CGCTCTGGTTCTGAACTAAT+TGG | - | chr1_3:1394122-1394141 | None:intergenic | 45.0% |
| ATTAAGCCCATTCTCTCGGA+AGG | - | chr1_3:1394344-1394363 | None:intergenic | 45.0% | |
| TCTATGGTTGTTGGATCAGC+TGG | - | chr1_3:1394442-1394461 | None:intergenic | 45.0% | |
| CTTCTGCCTAACAGACTCTA+TGG | - | chr1_3:1394458-1394477 | None:intergenic | 45.0% | |
| GAGTCTGTTAGGCAGAAGAT+TGG | + | chr1_3:1394460-1394479 | Msa0095940:CDS | 45.0% | |
| TCATCAGAAGACAGAGAGAG+AGG | + | chr1_3:1394522-1394541 | Msa0095940:CDS | 45.0% | |
| GAGAGAGAGGATCAAACAGT+TGG | + | chr1_3:1394535-1394554 | Msa0095940:CDS | 45.0% | |
| GTGCAGTGCTATGGTCTATT+GGG | + | chr1_3:1394566-1394585 | Msa0095940:CDS | 45.0% | |
| !! | GTGGTTCTAGTTGGTTTGGT+AGG | + | chr1_3:1394736-1394755 | Msa0095940:three_prime_UTR | 45.0% |
| !! | AAATTATTAAAAAATTATAG+TGG | - | chr1_3:1392744-1392763 | None:intergenic | 5.0% |
| TTGTCTATGACCGGTTGCCT+TGG | + | chr1_3:1392631-1392650 | Msa0095940:intron | 50.0% | |
| CAGAGTAGCAGTAGAGCACA+CGG | - | chr1_3:1392909-1392928 | None:intergenic | 50.0% | |
| CTCTACTGCTACTCTGGTCA+AGG | + | chr1_3:1392913-1392932 | Msa0095940:CDS | 50.0% | |
| !! | TAGAGTTGGTCTTCTGTCGG+AGG | + | chr1_3:1393500-1393519 | Msa0095940:CDS | 50.0% |
| GCTAAGGTGTGGACTCACAA+CGG | + | chr1_3:1393564-1393583 | Msa0095940:CDS | 50.0% | |
| CTGTAGTGACGGTCCAGAAT+TGG | + | chr1_3:1393829-1393848 | Msa0095940:CDS | 50.0% | |
| GGTCCAGAATTGGGCAGAAA+GGG | + | chr1_3:1393839-1393858 | Msa0095940:CDS | 50.0% | |
| GTCCAGAATTGGGCAGAAAG+GGG | + | chr1_3:1393840-1393859 | Msa0095940:CDS | 50.0% | |
| AACCCCTTTCTGCCCAATTC+TGG | - | chr1_3:1393845-1393864 | None:intergenic | 50.0% | |
| TGAATTACGCGTTGTCGCTC+TGG | - | chr1_3:1394137-1394156 | None:intergenic | 50.0% | |
| ATGCGAACCTTCCGAGAGAA+TGG | + | chr1_3:1394334-1394353 | Msa0095940:CDS | 50.0% | |
| TGCGAACCTTCCGAGAGAAT+GGG | + | chr1_3:1394335-1394354 | Msa0095940:CDS | 50.0% | |
| GGTGCAGTGCTATGGTCTAT+TGG | + | chr1_3:1394565-1394584 | Msa0095940:CDS | 50.0% | |
| ! | CTATTGGGAGCCTTGTGAGA+AGG | + | chr1_3:1394581-1394600 | Msa0095940:CDS | 50.0% |
| CATGGAGTGGCCAGCATGTA+CGG | + | chr1_3:1392164-1392183 | Msa0095940:exon | 55.0% | |
| CGTGTGCTCTACTGCTACTC+TGG | + | chr1_3:1392907-1392926 | Msa0095940:CDS | 55.0% | |
| AAGCGCAGTGAGACCGTTTG+AGG | - | chr1_3:1393463-1393482 | None:intergenic | 55.0% | |
| TCGCTGATCGTGACTACGAG+AGG | + | chr1_3:1393775-1393794 | Msa0095940:CDS | 55.0% | |
| CGGTCCAGAATTGGGCAGAA+AGG | + | chr1_3:1393838-1393857 | Msa0095940:CDS | 55.0% | |
| !! | TGTGGAGAGAAGGGCATCTG+AGG | + | chr1_3:1394172-1394191 | Msa0095940:CDS | 55.0% |
| GAATTGGCGGTGCAGTGCTA+TGG | + | chr1_3:1394557-1394576 | Msa0095940:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 1391969 | 1394891 | 1391969 | ID=Msa0095940;Name=Msa0095940 |
| chr1_3 | mRNA | 1391969 | 1394891 | 1391969 | ID=Msa0095940-mRNA-1;Parent=Msa0095940;Name=Msa0095940-mRNA-1;_AED=0.06;_eAED=0.06;_QI=196|1|1|1|1|1|7|249|441 |
| chr1_3 | exon | 1391969 | 1392226 | 1391969 | ID=Msa0095940-mRNA-1:exon:271;Parent=Msa0095940-mRNA-1 |
| chr1_3 | exon | 1392889 | 1392934 | 1392889 | ID=Msa0095940-mRNA-1:exon:272;Parent=Msa0095940-mRNA-1 |
| chr1_3 | exon | 1393040 | 1393154 | 1393040 | ID=Msa0095940-mRNA-1:exon:273;Parent=Msa0095940-mRNA-1 |
| chr1_3 | exon | 1393267 | 1393334 | 1393267 | ID=Msa0095940-mRNA-1:exon:274;Parent=Msa0095940-mRNA-1 |
| chr1_3 | exon | 1393426 | 1393992 | 1393426 | ID=Msa0095940-mRNA-1:exon:275;Parent=Msa0095940-mRNA-1 |
| chr1_3 | exon | 1394089 | 1394193 | 1394089 | ID=Msa0095940-mRNA-1:exon:276;Parent=Msa0095940-mRNA-1 |
| chr1_3 | exon | 1394280 | 1394891 | 1394280 | ID=Msa0095940-mRNA-1:exon:277;Parent=Msa0095940-mRNA-1 |
| chr1_3 | five_prime_UTR | 1391969 | 1392164 | 1391969 | ID=Msa0095940-mRNA-1:five_prime_utr;Parent=Msa0095940-mRNA-1 |
| chr1_3 | CDS | 1392165 | 1392226 | 1392165 | ID=Msa0095940-mRNA-1:cds;Parent=Msa0095940-mRNA-1 |
| chr1_3 | CDS | 1392889 | 1392934 | 1392889 | ID=Msa0095940-mRNA-1:cds;Parent=Msa0095940-mRNA-1 |
| chr1_3 | CDS | 1393040 | 1393154 | 1393040 | ID=Msa0095940-mRNA-1:cds;Parent=Msa0095940-mRNA-1 |
| chr1_3 | CDS | 1393267 | 1393334 | 1393267 | ID=Msa0095940-mRNA-1:cds;Parent=Msa0095940-mRNA-1 |
| chr1_3 | CDS | 1393426 | 1393992 | 1393426 | ID=Msa0095940-mRNA-1:cds;Parent=Msa0095940-mRNA-1 |
| chr1_3 | CDS | 1394089 | 1394193 | 1394089 | ID=Msa0095940-mRNA-1:cds;Parent=Msa0095940-mRNA-1 |
| chr1_3 | CDS | 1394280 | 1394642 | 1394280 | ID=Msa0095940-mRNA-1:cds;Parent=Msa0095940-mRNA-1 |
| chr1_3 | three_prime_UTR | 1394643 | 1394891 | 1394643 | ID=Msa0095940-mRNA-1:three_prime_utr;Parent=Msa0095940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
