Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252180 | XP_013446148.1 | 99.766 | 428 | 1 | 0 | 1 | 428 | 1 | 428 | 0.0 | 885 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252180 | sp|O22715|AP1M2_ARATH | 90.187 | 428 | 42 | 0 | 1 | 428 | 1 | 428 | 0.0 | 828 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0089980 | Msa1252180 | 0.804911 | 1.720602e-49 | -8.615850e-47 |
| Msa0090010 | Msa1252180 | 0.801510 | 8.704904e-49 | -8.615850e-47 |
| Msa0615030 | Msa1252180 | 0.826802 | 2.221139e-54 | -8.615850e-47 |
| Msa0626270 | Msa1252180 | 0.800362 | 1.493345e-48 | -8.615850e-47 |
| Msa0626460 | Msa1252180 | 0.806027 | 1.003903e-49 | -8.615850e-47 |
| Msa0645530 | Msa1252180 | 0.808127 | 3.608232e-50 | -8.615850e-47 |
| Msa0651560 | Msa1252180 | 0.844767 | 6.165552e-59 | -8.615850e-47 |
| Msa0661630 | Msa1252180 | 0.805690 | 1.182033e-49 | -8.615850e-47 |
| Msa0664540 | Msa1252180 | 0.835515 | 1.604509e-56 | -8.615850e-47 |
| Msa0685090 | Msa1252180 | 0.802450 | 5.577182e-49 | -8.615850e-47 |
| Msa0756380 | Msa1252180 | 0.874015 | 9.391281e-68 | -8.615850e-47 |
| Msa0782960 | Msa1252180 | 0.805391 | 1.365356e-49 | -8.615850e-47 |
| Msa0784220 | Msa1252180 | 0.802557 | 5.300878e-49 | -8.615850e-47 |
| Msa0789560 | Msa1252180 | 0.814263 | 1.684121e-51 | -8.615850e-47 |
| Msa0835630 | Msa1252180 | 0.814592 | 1.424690e-51 | -8.615850e-47 |
| Msa0124200 | Msa1252180 | 0.801526 | 8.637897e-49 | -8.615850e-47 |
| Msa0124320 | Msa1252180 | 0.801275 | 9.721776e-49 | -8.615850e-47 |
| Msa0168570 | Msa1252180 | 0.812288 | 4.571629e-51 | -8.615850e-47 |
| Msa0183760 | Msa1252180 | 0.816889 | 4.382015e-52 | -8.615850e-47 |
| Msa0231190 | Msa1252180 | 0.832905 | 7.237603e-56 | -8.615850e-47 |
| Msa1252180 | Msa1366550 | 0.801879 | 7.312226e-49 | -8.615850e-47 |
| Msa1252180 | Msa1400930 | 0.819068 | 1.410333e-52 | -8.615850e-47 |
| Msa1252180 | Msa1403710 | 0.814396 | 1.573638e-51 | -8.615850e-47 |
| Msa1252180 | Msa1434040 | 0.803699 | 3.078180e-49 | -8.615850e-47 |
| Msa1252180 | Msa1440900 | 0.803714 | 3.056026e-49 | -8.615850e-47 |
| Msa1252180 | Msa1463030 | 0.810843 | 9.420250e-51 | -8.615850e-47 |
| Msa0382370 | Msa1252180 | 0.812450 | 4.212960e-51 | -8.615850e-47 |
| Msa0395980 | Msa1252180 | 0.835317 | 1.800183e-56 | -8.615850e-47 |
| Msa0432160 | Msa1252180 | 0.811870 | 5.639425e-51 | -8.615850e-47 |
| Msa0440510 | Msa1252180 | 0.830342 | 3.099195e-55 | -8.615850e-47 |
| Msa0476680 | Msa1252180 | 0.816542 | 5.240025e-52 | -8.615850e-47 |
| Msa1047760 | Msa1252180 | 0.809331 | 1.995064e-50 | -8.615850e-47 |
| Msa0304100 | Msa1252180 | 0.805050 | 1.609579e-49 | -8.615850e-47 |
| Msa0305840 | Msa1252180 | 0.802018 | 6.844225e-49 | -8.615850e-47 |
| Msa0323260 | Msa1252180 | 0.818920 | 1.523450e-52 | -8.615850e-47 |
| Msa0362890 | Msa1252180 | 0.828745 | 7.577115e-55 | -8.615850e-47 |
| Msa1111290 | Msa1252180 | 0.822054 | 2.908479e-53 | -8.615850e-47 |
| Msa1111380 | Msa1252180 | 0.813422 | 2.580997e-51 | -8.615850e-47 |
| Msa0491000 | Msa1252180 | 0.817551 | 3.109373e-52 | -8.615850e-47 |
| Msa0521010 | Msa1252180 | 0.817270 | 3.596800e-52 | -8.615850e-47 |
| Msa0581400 | Msa1252180 | 0.800745 | 1.247707e-48 | -8.615850e-47 |
| Msa0881350 | Msa1252180 | 0.841263 | 5.283076e-58 | -8.615850e-47 |
| Msa0910620 | Msa1252180 | 0.800065 | 1.716254e-48 | -8.615850e-47 |
| Msa0971650 | Msa1252180 | 0.814058 | 1.868824e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252180 | MtrunA17_Chr8g0368141 | 99.766 | 428 | 1 | 0 | 1 | 428 | 1 | 428 | 0.0 | 885 |
| Msa1252180 | MtrunA17_Chr5g0413081 | 94.159 | 428 | 25 | 0 | 1 | 428 | 1 | 428 | 0.0 | 850 |
| Msa1252180 | MtrunA17_Chr5g0400501 | 44.091 | 440 | 229 | 7 | 1 | 426 | 1 | 437 | 2.17e-125 | 370 |
| Msa1252180 | MtrunA17_Chr3g0141861 | 34.086 | 443 | 268 | 8 | 6 | 427 | 3 | 442 | 6.10e-84 | 264 |
| Msa1252180 | MtrunA17_Chr5g0427331 | 34.141 | 454 | 262 | 10 | 6 | 427 | 3 | 451 | 5.36e-82 | 259 |
| Msa1252180 | MtrunA17_Chr7g0271601 | 26.424 | 439 | 272 | 12 | 7 | 426 | 4 | 410 | 9.91e-46 | 163 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252180 | AT1G60780.1 | 90.187 | 428 | 42 | 0 | 1 | 428 | 1 | 428 | 0.0 | 828 |
| Msa1252180 | AT1G10730.1 | 86.916 | 428 | 56 | 0 | 1 | 428 | 1 | 428 | 0.0 | 791 |
| Msa1252180 | AT5G46630.1 | 43.864 | 440 | 230 | 5 | 1 | 426 | 1 | 437 | 2.53e-129 | 380 |
| Msa1252180 | AT5G46630.2 | 42.548 | 416 | 222 | 5 | 1 | 402 | 1 | 413 | 3.81e-116 | 347 |
| Msa1252180 | AT4G24550.2 | 32.308 | 455 | 268 | 8 | 6 | 427 | 4 | 451 | 2.04e-83 | 263 |
| Msa1252180 | AT4G24550.3 | 32.203 | 354 | 216 | 4 | 6 | 336 | 4 | 356 | 2.29e-66 | 217 |
| Msa1252180 | AT4G24550.1 | 32.203 | 354 | 216 | 4 | 6 | 336 | 4 | 356 | 3.13e-66 | 216 |
| Msa1252180 | AT1G56590.1 | 26.591 | 440 | 276 | 11 | 7 | 427 | 4 | 415 | 1.38e-45 | 163 |
Find 139 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATTTATTAGAATATATT+TGG | 0.128333 | 8_2:+49009249 | Msa1252180:three_prime_UTR |
| TCCAGGTTAAGCCTTTATTT+TGG | 0.194447 | 8_2:+49007910 | Msa1252180:intron |
| ATGTTAGTTATTTCAGTTTC+TGG | 0.207416 | 8_2:-49004094 | None:intergenic |
| GAATCTTTGCCTCGGTATAT+TGG | 0.234893 | 8_2:-49005398 | None:intergenic |
| GGATCGGATCGGATCGAAAA+TGG | 0.256279 | 8_2:-49004180 | None:intergenic |
| AATCTTTGCCTCGGTATATT+GGG | 0.258561 | 8_2:-49005397 | None:intergenic |
| AAAAGCTAGGAGTCAATTTA+AGG | 0.269172 | 8_2:+49007983 | Msa1252180:CDS |
| CCCATTGATGTCCGCACATT+TGG | 0.273339 | 8_2:-49008236 | None:intergenic |
| AATTGGAAGAGGAATCTCTT+AGG | 0.291550 | 8_2:+49005230 | Msa1252180:CDS |
| TGCTTCCTCGTCTGTTATGC+TGG | 0.298393 | 8_2:-49008465 | None:intergenic |
| GATCAGAAGAAGAAGAAGTT+AGG | 0.316893 | 8_2:-49004147 | None:intergenic |
| TGTGCTTCCACCCAAAATAA+AGG | 0.331488 | 8_2:-49007921 | None:intergenic |
| TATTGAGAAAAGTGGGTATC+AGG | 0.341880 | 8_2:+49009070 | Msa1252180:CDS |
| TTGAAGATTATTGAGAAAAG+TGG | 0.347409 | 8_2:+49009062 | Msa1252180:CDS |
| GAGCAACTTACCATCTGTTC+TGG | 0.350535 | 8_2:-49009276 | None:intergenic |
| TGAACTACTTGATGAAATAA+TGG | 0.363893 | 8_2:+49005362 | Msa1252180:CDS |
| TTTGGAAGGAGACAGATTAT+AGG | 0.371091 | 8_2:+49009494 | Msa1252180:three_prime_UTR |
| TAATTAGGTCTGATGTTGTT+GGG | 0.372995 | 8_2:+49005675 | Msa1252180:CDS |
| GAATTTATTAGAATATATTT+GGG | 0.374202 | 8_2:+49009250 | Msa1252180:three_prime_UTR |
| ATAGCAATGGGCAAATAATT+AGG | 0.375714 | 8_2:+49005660 | Msa1252180:CDS |
| ATTAAACATAAGTTTACATT+TGG | 0.375832 | 8_2:-49009554 | None:intergenic |
| TTGTTCGATCATTCTCAAAT+CGG | 0.376459 | 8_2:-49007736 | None:intergenic |
| CAGATTAATGCATCTTTCTC+AGG | 0.379501 | 8_2:-49008275 | None:intergenic |
| TCAAAGGCCGCGTTCTCATT+TGG | 0.383267 | 8_2:+49004265 | Msa1252180:CDS |
| CGAAGGGAGTTGTAAGAGTT+CGG | 0.385833 | 8_2:-49009348 | None:intergenic |
| CTGAGAAAGATGCATTAATC+TGG | 0.386776 | 8_2:+49008276 | Msa1252180:CDS |
| GTGTTGATTTATATATTTGT+AGG | 0.389308 | 8_2:+49009380 | Msa1252180:three_prime_UTR |
| TGACCCATCAGGTGGGATAA+AGG | 0.393185 | 8_2:-49007762 | None:intergenic |
| GTCTGTGGAGGCAGTCTTAA+GGG | 0.393226 | 8_2:+49009227 | Msa1252180:three_prime_UTR |
| GGTCTGTGGAGGCAGTCTTA+AGG | 0.393905 | 8_2:+49009226 | Msa1252180:three_prime_UTR |
| ATTCCGGACACAGTAAAATA+TGG | 0.394093 | 8_2:-49008530 | None:intergenic |
| AAATGACAGAATATTATTAG+AGG | 0.397899 | 8_2:+49007503 | Msa1252180:CDS |
| TACATTTGGTCCTTCATACA+TGG | 0.400796 | 8_2:-49009540 | None:intergenic |
| GATCCAGTTGTATATGATAA+TGG | 0.403071 | 8_2:+49004970 | Msa1252180:CDS |
| CGATTCGATGTAGGAAGAAA+AGG | 0.415593 | 8_2:-49005071 | None:intergenic |
| CTTGATGAAATAATGGACTT+TGG | 0.418430 | 8_2:+49005369 | Msa1252180:CDS |
| TTGGAGAGTGATTCCGAGCC+TGG | 0.425895 | 8_2:-49004206 | None:intergenic |
| ACCATCAGGAGTACATGTTA+AGG | 0.425914 | 8_2:+49008426 | Msa1252180:intron |
| CCAAATGTGCGGACATCAAT+GGG | 0.434521 | 8_2:+49008236 | Msa1252180:CDS |
| ATTGAATGGTACAGTTTACT+TGG | 0.435068 | 8_2:-49009183 | None:intergenic |
| GAAGGGAGTTGTAAGAGTTC+GGG | 0.435304 | 8_2:-49009347 | None:intergenic |
| TGAAGATGAGAACATATTTG+AGG | 0.443158 | 8_2:+49005702 | Msa1252180:CDS |
| CTCAGAAATTAACATAGAAC+CGG | 0.446099 | 8_2:-49003992 | None:intergenic |
| TTTGGAGTGGTTGCATCAGC+AGG | 0.457237 | 8_2:-49008218 | None:intergenic |
| TCCAAATGTGCGGACATCAA+TGG | 0.462969 | 8_2:+49008235 | Msa1252180:CDS |
| TGTTCGATCATTCTCAAATC+GGG | 0.468696 | 8_2:-49007735 | None:intergenic |
| GTATTGCAAACGGCATCGTT+TGG | 0.470404 | 8_2:+49004014 | Msa1252180:five_prime_UTR |
| ACACCATTATCATATACAAC+TGG | 0.471229 | 8_2:-49004973 | None:intergenic |
| TAGGGATAACTTTGTTGTTG+TGG | 0.472156 | 8_2:+49005249 | Msa1252180:CDS |
| TTCAGTCATTGATCATTGAA+TGG | 0.473020 | 8_2:-49009197 | None:intergenic |
| CAAGACAGATGCTTATAGAA+TGG | 0.474086 | 8_2:+49005434 | Msa1252180:CDS |
| TGAAGATTATTGAGAAAAGT+GGG | 0.477745 | 8_2:+49009063 | Msa1252180:CDS |
| CGGAATCACTCTCCAATGTC+AGG | 0.478337 | 8_2:+49004213 | Msa1252180:exon |
| GTTCAGTTCGCAATGTTTGA+AGG | 0.482977 | 8_2:-49004124 | None:intergenic |
| CCATCAGGAGTACATGTTAA+GGG | 0.484040 | 8_2:+49008427 | Msa1252180:intron |
| AACATACTTGTCAATAGCAA+TGG | 0.485760 | 8_2:+49005647 | Msa1252180:CDS |
| CACCAAGCTCATCGAGAAAG+AGG | 0.487657 | 8_2:+49004335 | Msa1252180:CDS |
| AACCTCTTTCTCGATGAGCT+TGG | 0.491443 | 8_2:-49004337 | None:intergenic |
| ATTGGAAGAGGAATCTCTTA+GGG | 0.498057 | 8_2:+49005231 | Msa1252180:CDS |
| ATCTCAAACTTTACACGTAT+AGG | 0.499585 | 8_2:-49008506 | None:intergenic |
| GGGAAAAGCGATTGACTTGG+AGG | 0.500831 | 8_2:+49007545 | Msa1252180:CDS |
| ATTAAGCAATACCTGTATTC+CGG | 0.501936 | 8_2:-49008546 | None:intergenic |
| CAATGATCAATGACTGAAGC+AGG | 0.504417 | 8_2:+49009202 | Msa1252180:three_prime_UTR |
| GATCCGATCCGATCCGATCC+AGG | 0.505649 | 8_2:+49004188 | Msa1252180:five_prime_UTR |
| GCAGAGGCTGCACCTGACAT+TGG | 0.508341 | 8_2:-49004225 | None:intergenic |
| ATAATTAGGTCTGATGTTGT+TGG | 0.509969 | 8_2:+49005674 | Msa1252180:CDS |
| CTGTAACAAACGCTGTATCT+TGG | 0.510123 | 8_2:+49005481 | Msa1252180:CDS |
| ATCAAATCAAATGACCCATC+AGG | 0.513153 | 8_2:-49007773 | None:intergenic |
| TTGACAACAACGATCAAAGA+TGG | 0.513977 | 8_2:-49009428 | None:intergenic |
| ACATACTTGTCAATAGCAAT+GGG | 0.514301 | 8_2:+49005648 | Msa1252180:CDS |
| ATCAGAAGAAGAAGAAGTTA+GGG | 0.514754 | 8_2:-49004146 | None:intergenic |
| CAAGGGAAAAGCGATTGACT+TGG | 0.516810 | 8_2:+49007542 | Msa1252180:CDS |
| GATCGGATCGAAAATGGATC+AGG | 0.517856 | 8_2:-49004174 | None:intergenic |
| GCAGGGAGATCAACAGTCTC+AGG | 0.519937 | 8_2:+49004948 | Msa1252180:intron |
| GGCATGCCAGAGTGTAAACT+TGG | 0.520126 | 8_2:+49007477 | Msa1252180:CDS |
| TCAATTAATACCTTGCCTCC+AGG | 0.520387 | 8_2:-49008314 | None:intergenic |
| GGCACAAGGTAGAGCGACCA+AGG | 0.523950 | 8_2:+49007524 | Msa1252180:CDS |
| ACATTTGGTCCTTCATACAT+GGG | 0.527922 | 8_2:-49009539 | None:intergenic |
| ATTTCCTTTATCCCACCTGA+TGG | 0.531143 | 8_2:+49007758 | Msa1252180:CDS |
| GTGGGTATCAGGCTCTTCCA+TGG | 0.534878 | 8_2:+49009081 | Msa1252180:CDS |
| ACAGCGTTTGTTACAGCCAT+GGG | 0.536116 | 8_2:-49005474 | None:intergenic |
| ATCTTTGCCTCGGTATATTG+GGG | 0.539270 | 8_2:-49005396 | None:intergenic |
| CGAACTCTTACAACTCCCTT+CGG | 0.542100 | 8_2:+49009349 | Msa1252180:three_prime_UTR |
| AGTATTCATGAATTGAGTGT+TGG | 0.542811 | 8_2:+49009324 | Msa1252180:three_prime_UTR |
| GTGATACAGCCCATGTATGA+AGG | 0.543330 | 8_2:+49009530 | Msa1252180:three_prime_UTR |
| GCTGTATCTTGGCGTAGTGA+AGG | 0.543750 | 8_2:+49005492 | Msa1252180:CDS |
| GTGAGATACATAACAATGGC+TGG | 0.544124 | 8_2:+49009104 | Msa1252180:CDS |
| TTGATGAAGGTGTGTGCGAT+TGG | 0.544935 | 8_2:+49007712 | Msa1252180:intron |
| TAATTTCTGAGTATTGCAAA+CGG | 0.548807 | 8_2:+49004004 | Msa1252180:five_prime_UTR |
| CTGTATCTTGGCGTAGTGAA+GGG | 0.549972 | 8_2:+49005493 | Msa1252180:CDS |
| CAGTTCGCAATGTTTGAAGG+TGG | 0.550259 | 8_2:-49004121 | None:intergenic |
| ATGTTAGATTCGTGCTGAGG+TGG | 0.551797 | 8_2:-49004064 | None:intergenic |
| GCTTCCTCGTCTGTTATGCT+GGG | 0.552601 | 8_2:-49008464 | None:intergenic |
| ATTCTGATTGCAAAGAAAAG+AGG | 0.552786 | 8_2:-49009403 | None:intergenic |
| TACAGCGTTTGTTACAGCCA+TGG | 0.559712 | 8_2:-49005475 | None:intergenic |
| CTCATTTGGCGCGATTATCG+CGG | 0.569191 | 8_2:+49004279 | Msa1252180:CDS |
| TTGAGATTACGGTAAAAGCT+AGG | 0.572472 | 8_2:+49007970 | Msa1252180:CDS |
| GTGGTTGCATCAGCAGGCAC+AGG | 0.573449 | 8_2:-49008212 | None:intergenic |
| AATTAGGTCTGATGTTGTTG+GGG | 0.573919 | 8_2:+49005676 | Msa1252180:CDS |
| TTTCCTTTATCCCACCTGAT+GGG | 0.574034 | 8_2:+49007759 | Msa1252180:CDS |
| TTTGTCTAGTTGCTGTCATG+AGG | 0.575568 | 8_2:-49005029 | None:intergenic |
| CTCTTCCTTCTCGATATCAA+AGG | 0.575726 | 8_2:+49004249 | Msa1252180:CDS |
| TGTTAGATTCGTGCTGAGGT+GGG | 0.586269 | 8_2:-49004063 | None:intergenic |
| TGGGTATCAGGCTCTTCCAT+GGG | 0.587489 | 8_2:+49009082 | Msa1252180:CDS |
| ATTTGGGCAACCAGAACAGA+TGG | 0.590488 | 8_2:+49009266 | Msa1252180:three_prime_UTR |
| ATTGTTATGTATCTCACCCA+TGG | 0.591728 | 8_2:-49009098 | None:intergenic |
| CTCACTAAGAATCTTTGCCT+CGG | 0.591914 | 8_2:-49005406 | None:intergenic |
| ATCAACACACAATTGACCGA+AGG | 0.592439 | 8_2:-49009365 | None:intergenic |
| GATCCGATCCGATCCAGGCT+CGG | 0.594094 | 8_2:+49004193 | Msa1252180:five_prime_UTR |
| TTACATCAACGATTCGATGT+AGG | 0.595051 | 8_2:-49005080 | None:intergenic |
| TTTAAGCCAAGTTTACACTC+TGG | 0.595352 | 8_2:-49007483 | None:intergenic |
| GCACAAGGTAGAGCGACCAA+GGG | 0.598136 | 8_2:+49007525 | Msa1252180:CDS |
| TCAACACACAATTGACCGAA+GGG | 0.604142 | 8_2:-49009364 | None:intergenic |
| AAATCAAATGACCCATCAGG+TGG | 0.606484 | 8_2:-49007770 | None:intergenic |
| CGCGGCCTTTGATATCGAGA+AGG | 0.617009 | 8_2:-49004254 | None:intergenic |
| TGATGTCCGCACATTTGGAG+TGG | 0.623609 | 8_2:-49008231 | None:intergenic |
| GATCGAAAATGGATCAGGAT+CGG | 0.624630 | 8_2:-49004169 | None:intergenic |
| TGACTGAAGCAGGTGGTCTG+TGG | 0.624887 | 8_2:+49009212 | Msa1252180:three_prime_UTR |
| TCTGTGGAGGCAGTCTTAAG+GGG | 0.639096 | 8_2:+49009228 | Msa1252180:three_prime_UTR |
| TGGCTGGAGAGTATGAGCTA+AGG | 0.639864 | 8_2:+49009120 | Msa1252180:CDS |
| GCAATGTTAGATTCGTGCTG+AGG | 0.644818 | 8_2:-49004067 | None:intergenic |
| GAGCCTGGATCGGATCGGAT+CGG | 0.647004 | 8_2:-49004191 | None:intergenic |
| ATTCCGAGCCTGGATCGGAT+CGG | 0.650523 | 8_2:-49004196 | None:intergenic |
| AGTTACACAGAGACCTCCCA+TGG | 0.655937 | 8_2:+49005458 | Msa1252180:CDS |
| GCGTTTGTTACAGCCATGGG+AGG | 0.658453 | 8_2:-49005471 | None:intergenic |
| CTGAAGCAGGTGGTCTGTGG+AGG | 0.665939 | 8_2:+49009215 | Msa1252180:three_prime_UTR |
| GAAGCGTTCAGCTTCAACAG+CGG | 0.665982 | 8_2:-49004310 | None:intergenic |
| GACATACAGACTCAGCACAC+AGG | 0.667857 | 8_2:+49007796 | Msa1252180:CDS |
| ATGCAACCACTCCAAATGTG+CGG | 0.670804 | 8_2:+49008225 | Msa1252180:CDS |
| AATCAAATGACCCATCAGGT+GGG | 0.675073 | 8_2:-49007769 | None:intergenic |
| TAGATTCGTGCTGAGGTGGG+TGG | 0.677534 | 8_2:-49004060 | None:intergenic |
| GGAGTCAATTTAAGGAACGT+AGG | 0.677567 | 8_2:+49007991 | Msa1252180:CDS |
| TCTTTGCCTCGGTATATTGG+GGG | 0.679446 | 8_2:-49005395 | None:intergenic |
| ATCGAGAAGGAAGAGAGCAG+AGG | 0.685565 | 8_2:-49004241 | None:intergenic |
| TGATCAATGACTGAAGCAGG+TGG | 0.692723 | 8_2:+49009205 | Msa1252180:three_prime_UTR |
| ATGGGTGAGATACATAACAA+TGG | 0.702359 | 8_2:+49009100 | Msa1252180:CDS |
| TCTTCCCAGCATAACAGACG+AGG | 0.716182 | 8_2:+49008460 | Msa1252180:CDS |
| AGAATATTATTAGAGGCACA+AGG | 0.724642 | 8_2:+49007510 | Msa1252180:CDS |
| AATCGCGCCAAATGAGAACG+CGG | 0.730670 | 8_2:-49004272 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATATAAATTAATAAA+TGG | - | chr8_2:49008154-49008173 | None:intergenic | 0.0% |
| !! | TATTAAAATTGAAAAAAACA+CGG | + | chr8_2:49003946-49003965 | Msa1252180:five_prime_UTR | 10.0% |
| !!! | TTAATATTTTCATGAAAAAA+TGG | - | chr8_2:49004659-49004678 | None:intergenic | 10.0% |
| !!! | TATATTTCTAATATGATTTA+AGG | - | chr8_2:49006829-49006848 | None:intergenic | 10.0% |
| !!! | TAGATAGTAAATTTTTAAAT+CGG | + | chr8_2:49008763-49008782 | Msa1252180:intron | 10.0% |
| !!! | ATTTTGATTAAATAAATCAA+AGG | - | chr8_2:49009000-49009019 | None:intergenic | 10.0% |
| !!! | ATTATATTGTTTTGATTTAT+AGG | + | chr8_2:49009031-49009050 | Msa1252180:intron | 10.0% |
| !! | GAATTTATTAGAATATATTT+GGG | + | chr8_2:49009250-49009269 | Msa1252180:three_prime_UTR | 10.0% |
| !!! | TAATTTTTCTCAAATCATTA+CGG | + | chr8_2:49004531-49004550 | Msa1252180:intron | 15.0% |
| !! | AAAAGCTTAGAAAAATTTAT+AGG | - | chr8_2:49006134-49006153 | None:intergenic | 15.0% |
| !!! | TATTTTATTAGAAGAAACTA+GGG | - | chr8_2:49006591-49006610 | None:intergenic | 15.0% |
| !! | AAATACAGATTTGTATAATA+TGG | + | chr8_2:49006606-49006625 | Msa1252180:intron | 15.0% |
| !! | AATACAGATTTGTATAATAT+GGG | + | chr8_2:49006607-49006626 | Msa1252180:intron | 15.0% |
| !! | ATAAATAGATATATGAAGAA+TGG | + | chr8_2:49006694-49006713 | Msa1252180:intron | 15.0% |
| !!! | ATATATTTTTCGAACAAAAA+TGG | + | chr8_2:49006844-49006863 | Msa1252180:intron | 15.0% |
| !! | ATGAACATATATGTAAAAAA+AGG | - | chr8_2:49008028-49008047 | None:intergenic | 15.0% |
| !! | GGAATTTATTAGAATATATT+TGG | + | chr8_2:49009249-49009268 | Msa1252180:three_prime_UTR | 15.0% |
| !! | ATTAAACATAAGTTTACATT+TGG | - | chr8_2:49009557-49009576 | None:intergenic | 15.0% |
| !!! | TGTTTCTTTTAATGATTTTC+CGG | + | chr8_2:49003973-49003992 | Msa1252180:five_prime_UTR | 20.0% |
| !! | AATTATGGTTCAAATTTGAA+TGG | + | chr8_2:49004421-49004440 | Msa1252180:intron | 20.0% |
| !!! | TTTTTTCAGTGTTATGTTTT+TGG | + | chr8_2:49004892-49004911 | Msa1252180:intron | 20.0% |
| !!! | TTTTTCAGTGTTATGTTTTT+GGG | + | chr8_2:49004893-49004912 | Msa1252180:intron | 20.0% |
| !!! | AAAATTGTATATTAGTTTGC+TGG | + | chr8_2:49005142-49005161 | Msa1252180:intron | 20.0% |
| !! | TGCAATAATTAATGATTGAT+TGG | + | chr8_2:49005169-49005188 | Msa1252180:intron | 20.0% |
| !!! | CATTTAGATATGTGATTTTA+TGG | + | chr8_2:49005564-49005583 | Msa1252180:intron | 20.0% |
| !! | AAACAAAATTCATTAGTTAG+TGG | - | chr8_2:49005596-49005615 | None:intergenic | 20.0% |
| !!! | AACTAATGAATTTTGTTTTC+AGG | + | chr8_2:49005598-49005617 | Msa1252180:intron | 20.0% |
| !! | ATGAAATGAAGTAATGAATT+GGG | - | chr8_2:49006275-49006294 | None:intergenic | 20.0% |
| !! | TATATAATAGAATTCAAGCT+GGG | - | chr8_2:49006300-49006319 | None:intergenic | 20.0% |
| !!! | GTAAATTATAAAGTACTTCA+GGG | - | chr8_2:49006466-49006485 | None:intergenic | 20.0% |
| !!! | TGTAAATTATAAAGTACTTC+AGG | - | chr8_2:49006467-49006486 | None:intergenic | 20.0% |
| !!! | GTATTTTATTAGAAGAAACT+AGG | - | chr8_2:49006592-49006611 | None:intergenic | 20.0% |
| !! | ATACAGATTTGTATAATATG+GGG | + | chr8_2:49006608-49006627 | Msa1252180:intron | 20.0% |
| !!! | GTTTTGTTAGAATATAAGTA+TGG | + | chr8_2:49006641-49006660 | Msa1252180:intron | 20.0% |
| !! | ACAAAAATGGTTATTATAGA+AGG | + | chr8_2:49006857-49006876 | Msa1252180:intron | 20.0% |
| !! | CAAAAATGGTTATTATAGAA+GGG | + | chr8_2:49006858-49006877 | Msa1252180:intron | 20.0% |
| !! | AAAAATGGTTATTATAGAAG+GGG | + | chr8_2:49006859-49006878 | Msa1252180:intron | 20.0% |
| !! | AAATGACAGAATATTATTAG+AGG | + | chr8_2:49007503-49007522 | Msa1252180:CDS | 20.0% |
| !! | ATTAAAATGTACAACTAACT+TGG | - | chr8_2:49007615-49007634 | None:intergenic | 20.0% |
| !! | AAATATCATATGATCAACAA+TGG | - | chr8_2:49007887-49007906 | None:intergenic | 20.0% |
| !! | ATCATATGATATTTATTTCC+AGG | + | chr8_2:49007893-49007912 | Msa1252180:intron | 20.0% |
| !!! | TGATTTTGAAATAACGAATT+TGG | + | chr8_2:49008389-49008408 | Msa1252180:intron | 20.0% |
| !! | CAGAAAATAAGAAAAAACAT+GGG | - | chr8_2:49008575-49008594 | None:intergenic | 20.0% |
| !! | TCAGAAAATAAGAAAAAACA+TGG | - | chr8_2:49008576-49008595 | None:intergenic | 20.0% |
| !! | AGATACATAATACTAGAAAT+GGG | - | chr8_2:49008611-49008630 | None:intergenic | 20.0% |
| !! | AAGATACATAATACTAGAAA+TGG | - | chr8_2:49008612-49008631 | None:intergenic | 20.0% |
| !! | AAAAAACATGACATCATAAT+TGG | + | chr8_2:49008806-49008825 | Msa1252180:intron | 20.0% |
| !!! | GTGTTGATTTATATATTTGT+AGG | + | chr8_2:49009380-49009399 | Msa1252180:three_prime_UTR | 20.0% |
| !! | TAATTTCTGAGTATTGCAAA+CGG | + | chr8_2:49004004-49004023 | Msa1252180:five_prime_UTR | 25.0% |
| !! | ATGTTAGTTATTTCAGTTTC+TGG | - | chr8_2:49004097-49004116 | None:intergenic | 25.0% |
| ! | GAAGAAAGAAATGAGAATTA+AGG | - | chr8_2:49004372-49004391 | None:intergenic | 25.0% |
| !!! | TGTTACTTTTGTGCTAATTA+TGG | + | chr8_2:49004406-49004425 | Msa1252180:intron | 25.0% |
| ! | AATTCAATGTAATCACATGT+CGG | - | chr8_2:49004508-49004527 | None:intergenic | 25.0% |
| !! | AATTGAGAAATTTTCGATTG+CGG | + | chr8_2:49004857-49004876 | Msa1252180:intron | 25.0% |
| ! | TGAACTACTTGATGAAATAA+TGG | + | chr8_2:49005362-49005381 | Msa1252180:CDS | 25.0% |
| ! | GTTAAACTACAAGAAAAATG+AGG | + | chr8_2:49005515-49005534 | Msa1252180:CDS | 25.0% |
| ! | ATACATCTTCACGTTTATAA+TGG | - | chr8_2:49005544-49005563 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTTCAGGTTTTCT+TGG | + | chr8_2:49005607-49005626 | Msa1252180:intron | 25.0% |
| ! | TATTTAGGTACTCAATTTCA+AGG | + | chr8_2:49005785-49005804 | Msa1252180:intron | 25.0% |
| ! | TAGATGTGTAATTGTTTCAA+AGG | + | chr8_2:49006083-49006102 | Msa1252180:intron | 25.0% |
| !!! | TGTTTTTAGAAGCTATTCTA+AGG | - | chr8_2:49006168-49006187 | None:intergenic | 25.0% |
| ! | GATGAAATGAAGTAATGAAT+TGG | - | chr8_2:49006276-49006295 | None:intergenic | 25.0% |
| ! | ATATAATAGAATTCAAGCTG+GGG | - | chr8_2:49006299-49006318 | None:intergenic | 25.0% |
| ! | GTATATAATAGAATTCAAGC+TGG | - | chr8_2:49006301-49006320 | None:intergenic | 25.0% |
| ! | ATCAAAAAAATGGAAAGTAG+AGG | - | chr8_2:49006329-49006348 | None:intergenic | 25.0% |
| ! | CAAAAGTCTCATCAAAAAAA+TGG | - | chr8_2:49006339-49006358 | None:intergenic | 25.0% |
| !!! | TTTTTTTGATGAGACTTTTG+AGG | + | chr8_2:49006339-49006358 | Msa1252180:intron | 25.0% |
| !!! | TTTTTTGATGAGACTTTTGA+GGG | + | chr8_2:49006340-49006359 | Msa1252180:intron | 25.0% |
| ! | TACTTTATAATTTACACTCC+TGG | + | chr8_2:49006471-49006490 | Msa1252180:intron | 25.0% |
| ! | TAAGATAGTAACATTCTGAT+AGG | + | chr8_2:49006505-49006524 | Msa1252180:intron | 25.0% |
| ! | TAAGTATGGTAAAAAAGTGA+AGG | + | chr8_2:49006655-49006674 | Msa1252180:intron | 25.0% |
| !! | AGATATATGAAGAATGGATT+TGG | + | chr8_2:49006700-49006719 | Msa1252180:intron | 25.0% |
| ! | AAAATGGTTATTATAGAAGG+GGG | + | chr8_2:49006860-49006879 | Msa1252180:intron | 25.0% |
| ! | TTCTTATTGTAATTCTTTGC+TGG | - | chr8_2:49006938-49006957 | None:intergenic | 25.0% |
| ! | ATACATTATCACTCTCATTT+CGG | - | chr8_2:49007055-49007074 | None:intergenic | 25.0% |
| !!! | CTGTTTGTTTTGCTTTTAAT+TGG | - | chr8_2:49007139-49007158 | None:intergenic | 25.0% |
| ! | CAATTAAAAGCAAAACAAAC+AGG | + | chr8_2:49007137-49007156 | Msa1252180:intron | 25.0% |
| !! | GATGTGTTTTGTAAGAATTT+AGG | + | chr8_2:49007261-49007280 | Msa1252180:intron | 25.0% |
| !! | GTTTTGTAAGAATTTAGGTA+TGG | + | chr8_2:49007266-49007285 | Msa1252180:intron | 25.0% |
| ! | AAGAATTTAGGTATGGTAAA+AGG | + | chr8_2:49007273-49007292 | Msa1252180:intron | 25.0% |
| ! | AGAATTTAGGTATGGTAAAA+GGG | + | chr8_2:49007274-49007293 | Msa1252180:intron | 25.0% |
| ! | GATTATTTCCATAACAGTAT+AGG | - | chr8_2:49007330-49007349 | None:intergenic | 25.0% |
| ! | TACTGTTATGGAAATAATCT+AGG | + | chr8_2:49007331-49007350 | Msa1252180:intron | 25.0% |
| ! | ACTGTTATGGAAATAATCTA+GGG | + | chr8_2:49007332-49007351 | Msa1252180:intron | 25.0% |
| !!! | TTGAAAAGCATTCAAAAAGT+CGG | + | chr8_2:49007946-49007965 | Msa1252180:CDS | 25.0% |
| ! | AACTACTTACCTTGAATTTA+TGG | + | chr8_2:49008078-49008097 | Msa1252180:intron | 25.0% |
| ! | AATGGAGAAGTAAATACATA+CGG | - | chr8_2:49008136-49008155 | None:intergenic | 25.0% |
| ! | CTAGTATTATGTATCTTTCA+TGG | + | chr8_2:49008615-49008634 | Msa1252180:intron | 25.0% |
| !! | CTAGCAATATGAATTTTACA+AGG | + | chr8_2:49008884-49008903 | Msa1252180:intron | 25.0% |
| ! | AAAGGATAATACAATATGTG+TGG | - | chr8_2:49008964-49008983 | None:intergenic | 25.0% |
| ! | TTGAAGATTATTGAGAAAAG+TGG | + | chr8_2:49009062-49009081 | Msa1252180:CDS | 25.0% |
| ! | TGAAGATTATTGAGAAAAGT+GGG | + | chr8_2:49009063-49009082 | Msa1252180:CDS | 25.0% |
| CTCAGAAATTAACATAGAAC+CGG | - | chr8_2:49003995-49004014 | None:intergenic | 30.0% | |
| ATCAGAAGAAGAAGAAGTTA+GGG | - | chr8_2:49004149-49004168 | None:intergenic | 30.0% | |
| AAGAAATGAGAATTAAGGTG+TGG | - | chr8_2:49004367-49004386 | None:intergenic | 30.0% | |
| GATCCAGTTGTATATGATAA+TGG | + | chr8_2:49004970-49004989 | Msa1252180:CDS | 30.0% | |
| ACACCATTATCATATACAAC+TGG | - | chr8_2:49004976-49004995 | None:intergenic | 30.0% | |
| !!! | CAAGCATTATTTTGAGGAAT+TGG | + | chr8_2:49005213-49005232 | Msa1252180:CDS | 30.0% |
| !!! | TTATTTTGAGGAATTGGAAG+AGG | + | chr8_2:49005219-49005238 | Msa1252180:CDS | 30.0% |
| !! | CTTGATGAAATAATGGACTT+TGG | + | chr8_2:49005369-49005388 | Msa1252180:CDS | 30.0% |
| AAACTACAAGAAAAATGAGG+TGG | + | chr8_2:49005518-49005537 | Msa1252180:intron | 30.0% | |
| AACATACTTGTCAATAGCAA+TGG | + | chr8_2:49005647-49005666 | Msa1252180:CDS | 30.0% | |
| ACATACTTGTCAATAGCAAT+GGG | + | chr8_2:49005648-49005667 | Msa1252180:CDS | 30.0% | |
| ATAGCAATGGGCAAATAATT+AGG | + | chr8_2:49005660-49005679 | Msa1252180:CDS | 30.0% | |
| ATAATTAGGTCTGATGTTGT+TGG | + | chr8_2:49005674-49005693 | Msa1252180:CDS | 30.0% | |
| TAATTAGGTCTGATGTTGTT+GGG | + | chr8_2:49005675-49005694 | Msa1252180:CDS | 30.0% | |
| TGAAGATGAGAACATATTTG+AGG | + | chr8_2:49005702-49005721 | Msa1252180:CDS | 30.0% | |
| ! | AGACTAGCTACTAGTTATTT+AGG | + | chr8_2:49005770-49005789 | Msa1252180:intron | 30.0% |
| TTTATGTGGTTGTGTTTAAG+TGG | - | chr8_2:49005904-49005923 | None:intergenic | 30.0% | |
| TAATGGAAATCGCTTATCTT+TGG | - | chr8_2:49005952-49005971 | None:intergenic | 30.0% | |
| CTTCAAGTCAAGTAGAATAA+TGG | - | chr8_2:49005969-49005988 | None:intergenic | 30.0% | |
| ! | CATTATTCTACTTGACTTGA+AGG | + | chr8_2:49005967-49005986 | Msa1252180:intron | 30.0% |
| ! | TAGGTTTGATAATTACCAGT+AGG | + | chr8_2:49006021-49006040 | Msa1252180:intron | 30.0% |
| ! | AGGTTTGATAATTACCAGTA+GGG | + | chr8_2:49006022-49006041 | Msa1252180:intron | 30.0% |
| ! | AGCTTCTAAAAACAGCTTAT+AGG | + | chr8_2:49006174-49006193 | Msa1252180:intron | 30.0% |
| ! | GCTTCTAAAAACAGCTTATA+GGG | + | chr8_2:49006175-49006194 | Msa1252180:intron | 30.0% |
| TGTTTATGAGTTTAGAAGAC+GGG | - | chr8_2:49006207-49006226 | None:intergenic | 30.0% | |
| GTGTTTATGAGTTTAGAAGA+CGG | - | chr8_2:49006208-49006227 | None:intergenic | 30.0% | |
| GAATTGGGTGTTAATTGTAA+GGG | - | chr8_2:49006260-49006279 | None:intergenic | 30.0% | |
| TGAATTGGGTGTTAATTGTA+AGG | - | chr8_2:49006261-49006280 | None:intergenic | 30.0% | |
| TATAATAGAATTCAAGCTGG+GGG | - | chr8_2:49006298-49006317 | None:intergenic | 30.0% | |
| ! | TTTTTGATGAGACTTTTGAG+GGG | + | chr8_2:49006341-49006360 | Msa1252180:intron | 30.0% |
| !!! | AAGCTGGTTTTCTTAACAAT+AGG | + | chr8_2:49006404-49006423 | Msa1252180:intron | 30.0% |
| !!! | AGCTGGTTTTCTTAACAATA+GGG | + | chr8_2:49006405-49006424 | Msa1252180:intron | 30.0% |
| ! | GTTTTCTTAACAATAGGGAT+GGG | + | chr8_2:49006410-49006429 | Msa1252180:intron | 30.0% |
| ATTTGTATAATATGGGGTCT+TGG | + | chr8_2:49006614-49006633 | Msa1252180:intron | 30.0% | |
| TTCAACTCAAGATTTAAGCA+TGG | + | chr8_2:49006790-49006809 | Msa1252180:intron | 30.0% | |
| !! | ATTTTGAGGAAAAACTACTG+TGG | - | chr8_2:49007084-49007103 | None:intergenic | 30.0% |
| ! | AGAATATTATTAGAGGCACA+AGG | + | chr8_2:49007510-49007529 | Msa1252180:CDS | 30.0% |
| !! | TTTGTGTTGATTCTTGATGA+AGG | + | chr8_2:49007699-49007718 | Msa1252180:intron | 30.0% |
| TTGTTCGATCATTCTCAAAT+CGG | - | chr8_2:49007739-49007758 | None:intergenic | 30.0% | |
| AAAAAGTCGGATTGAGATTA+CGG | + | chr8_2:49007959-49007978 | Msa1252180:CDS | 30.0% | |
| AAAAGCTAGGAGTCAATTTA+AGG | + | chr8_2:49007983-49008002 | Msa1252180:CDS | 30.0% | |
| ! | ATCTTCCATGATGGAAAATA+GGG | - | chr8_2:49008056-49008075 | None:intergenic | 30.0% |
| ! | TATCTTCCATGATGGAAAAT+AGG | - | chr8_2:49008057-49008076 | None:intergenic | 30.0% |
| ATGGAGAAGTAAATACATAC+GGG | - | chr8_2:49008135-49008154 | None:intergenic | 30.0% | |
| ! | TGGAAAATAAGATCTTTTCC+TGG | + | chr8_2:49008296-49008315 | Msa1252180:CDS | 30.0% |
| ! | AAAATAAGATCTTTTCCTGG+AGG | + | chr8_2:49008299-49008318 | Msa1252180:CDS | 30.0% |
| !! | GGTATTAATTGACTTGGAAA+TGG | + | chr8_2:49008325-49008344 | Msa1252180:intron | 30.0% |
| ATCTCAAACTTTACACGTAT+AGG | - | chr8_2:49008509-49008528 | None:intergenic | 30.0% | |
| ! | ATACCATATTTTACTGTGTC+CGG | + | chr8_2:49008527-49008546 | Msa1252180:CDS | 30.0% |
| ATTAAGCAATACCTGTATTC+CGG | - | chr8_2:49008549-49008568 | None:intergenic | 30.0% | |
| !!! | TGTCATTTTCATGTTTTCCA+TGG | + | chr8_2:49008671-49008690 | Msa1252180:intron | 30.0% |
| !! | GTCATTTTCATGTTTTCCAT+GGG | + | chr8_2:49008672-49008691 | Msa1252180:intron | 30.0% |
| ! | TCATTTTCATGTTTTCCATG+GGG | + | chr8_2:49008673-49008692 | Msa1252180:intron | 30.0% |
| AATCGGAAGATAAATACTGA+TGG | + | chr8_2:49008780-49008799 | Msa1252180:intron | 30.0% | |
| ATCGGAAGATAAATACTGAT+GGG | + | chr8_2:49008781-49008800 | Msa1252180:intron | 30.0% | |
| CAAAACTGTTAATCATGGAA+AGG | - | chr8_2:49008860-49008879 | None:intergenic | 30.0% | |
| !! | TTTGAGTTTTGTACGTTGTT+TGG | + | chr8_2:49009147-49009166 | Msa1252180:exon | 30.0% |
| ATTGAATGGTACAGTTTACT+TGG | - | chr8_2:49009186-49009205 | None:intergenic | 30.0% | |
| TTCAGTCATTGATCATTGAA+TGG | - | chr8_2:49009200-49009219 | None:intergenic | 30.0% | |
| AGTATTCATGAATTGAGTGT+TGG | + | chr8_2:49009324-49009343 | Msa1252180:three_prime_UTR | 30.0% | |
| ATTCTGATTGCAAAGAAAAG+AGG | - | chr8_2:49009406-49009425 | None:intergenic | 30.0% | |
| GATCAGAAGAAGAAGAAGTT+AGG | - | chr8_2:49004150-49004169 | None:intergenic | 35.0% | |
| ! | GTCGTTTAGATCAGAAGTAT+CGG | - | chr8_2:49004479-49004498 | None:intergenic | 35.0% |
| CATGTATTTGTGTAAGACAC+CGG | + | chr8_2:49004790-49004809 | Msa1252180:intron | 35.0% | |
| !!! | TTTGTTTTGAAATTGTGCGC+AGG | + | chr8_2:49004930-49004949 | Msa1252180:intron | 35.0% |
| !!! | TTGTTTTGAAATTGTGCGCA+GGG | + | chr8_2:49004931-49004950 | Msa1252180:intron | 35.0% |
| TTACATCAACGATTCGATGT+AGG | - | chr8_2:49005083-49005102 | None:intergenic | 35.0% | |
| !! | GTAAGCTCTATTGCTAGTTT+TGG | + | chr8_2:49005099-49005118 | Msa1252180:intron | 35.0% |
| GATTGATTGGTATGTGATTG+AGG | + | chr8_2:49005182-49005201 | Msa1252180:intron | 35.0% | |
| !! | GGTGTTCAAGCATTATTTTG+AGG | + | chr8_2:49005207-49005226 | Msa1252180:intron | 35.0% |
| AATTGGAAGAGGAATCTCTT+AGG | + | chr8_2:49005230-49005249 | Msa1252180:CDS | 35.0% | |
| ATTGGAAGAGGAATCTCTTA+GGG | + | chr8_2:49005231-49005250 | Msa1252180:CDS | 35.0% | |
| !! | TAGGGATAACTTTGTTGTTG+TGG | + | chr8_2:49005249-49005268 | Msa1252180:CDS | 35.0% |
| ! | ACACTGAATTCTTTTGTCCT+TGG | + | chr8_2:49005334-49005353 | Msa1252180:intron | 35.0% |
| AATCTTTGCCTCGGTATATT+GGG | - | chr8_2:49005400-49005419 | None:intergenic | 35.0% | |
| CAAGACAGATGCTTATAGAA+TGG | + | chr8_2:49005434-49005453 | Msa1252180:CDS | 35.0% | |
| !!! | TTTTCAGGTTTTCTTGGATG+TGG | + | chr8_2:49005613-49005632 | Msa1252180:intron | 35.0% |
| AATTAGGTCTGATGTTGTTG+GGG | + | chr8_2:49005676-49005695 | Msa1252180:CDS | 35.0% | |
| ACACAACCACATAAAATCCT+TGG | + | chr8_2:49005909-49005928 | Msa1252180:intron | 35.0% | |
| CACAACCACATAAAATCCTT+GGG | + | chr8_2:49005910-49005929 | Msa1252180:intron | 35.0% | |
| ! | ACTTTCCCAAGGATTTTATG+TGG | - | chr8_2:49005918-49005937 | None:intergenic | 35.0% |
| TTGTTGAAATAGCTCACACA+CGG | + | chr8_2:49005992-49006011 | Msa1252180:intron | 35.0% | |
| ! | ATAATTACCAGTAGGGTGTT+TGG | + | chr8_2:49006029-49006048 | Msa1252180:intron | 35.0% |
| AATACTAACAAGTGCCCTTA+GGG | - | chr8_2:49006236-49006255 | None:intergenic | 35.0% | |
| AAATACTAACAAGTGCCCTT+AGG | - | chr8_2:49006237-49006256 | None:intergenic | 35.0% | |
| ! | GGTTTTCTTAACAATAGGGA+TGG | + | chr8_2:49006409-49006428 | Msa1252180:intron | 35.0% |
| TATCCTCAAGTAGAATAGCT+TGG | - | chr8_2:49006547-49006566 | None:intergenic | 35.0% | |
| AGCTATTCTACTTGAGGATA+AGG | + | chr8_2:49006547-49006566 | Msa1252180:intron | 35.0% | |
| GCTATTCTACTTGAGGATAA+GGG | + | chr8_2:49006548-49006567 | Msa1252180:intron | 35.0% | |
| CTATTCTACTTGAGGATAAG+GGG | + | chr8_2:49006549-49006568 | Msa1252180:intron | 35.0% | |
| TATTCTACTTGAGGATAAGG+GGG | + | chr8_2:49006550-49006569 | Msa1252180:intron | 35.0% | |
| ATGGTAAAAAAGTGAAGGCT+TGG | + | chr8_2:49006660-49006679 | Msa1252180:intron | 35.0% | |
| ! | TATGAAGAATGGATTTGGCT+TGG | + | chr8_2:49006705-49006724 | Msa1252180:intron | 35.0% |
| TTATTATAGAAGGGGGAAAG+TGG | + | chr8_2:49006867-49006886 | Msa1252180:intron | 35.0% | |
| CACTTGTTTCAATTGCTAGA+GGG | - | chr8_2:49006913-49006932 | None:intergenic | 35.0% | |
| !! | CTAGACTAGTGCTACTTTAT+CGG | - | chr8_2:49007016-49007035 | None:intergenic | 35.0% |
| ! | AAAACAAACAGGTGCTACAA+TGG | + | chr8_2:49007148-49007167 | Msa1252180:intron | 35.0% |
| TAGGTATGGTAAAAGGGTAA+AGG | + | chr8_2:49007280-49007299 | Msa1252180:intron | 35.0% | |
| CTGTATTTCACAACAAGACA+TGG | - | chr8_2:49007456-49007475 | None:intergenic | 35.0% | |
| ! | TGTCTTGTTGTGAAATACAG+TGG | + | chr8_2:49007456-49007475 | Msa1252180:intron | 35.0% |
| TTTAAGCCAAGTTTACACTC+TGG | - | chr8_2:49007486-49007505 | None:intergenic | 35.0% | |
| TGTTCGATCATTCTCAAATC+GGG | - | chr8_2:49007738-49007757 | None:intergenic | 35.0% | |
| ATCAAATCAAATGACCCATC+AGG | - | chr8_2:49007776-49007795 | None:intergenic | 35.0% | |
| ACAGAAGGTTTCATATCTAG+AGG | - | chr8_2:49007829-49007848 | None:intergenic | 35.0% | |
| TATGAAACCTTCTGTTTGAG+TGG | + | chr8_2:49007834-49007853 | Msa1252180:intron | 35.0% | |
| !! | TCCAGGTTAAGCCTTTATTT+TGG | + | chr8_2:49007910-49007929 | Msa1252180:intron | 35.0% |
| !!! | CCAGGTTAAGCCTTTATTTT+GGG | + | chr8_2:49007911-49007930 | Msa1252180:intron | 35.0% |
| TTGAGATTACGGTAAAAGCT+AGG | + | chr8_2:49007970-49007989 | Msa1252180:CDS | 35.0% | |
| AAGGAACGTAGGTACTAATA+TGG | + | chr8_2:49008002-49008021 | Msa1252180:intron | 35.0% | |
| ! | TCTTCCATGATGGAAAATAG+GGG | - | chr8_2:49008055-49008074 | None:intergenic | 35.0% |
| AGTAGTTGTATCTTCCATGA+TGG | - | chr8_2:49008065-49008084 | None:intergenic | 35.0% | |
| CAAGTCGATCCATAAATTCA+AGG | - | chr8_2:49008090-49008109 | None:intergenic | 35.0% | |
| TGGAGAAGTAAATACATACG+GGG | - | chr8_2:49008134-49008153 | None:intergenic | 35.0% | |
| CAGATTAATGCATCTTTCTC+AGG | - | chr8_2:49008278-49008297 | None:intergenic | 35.0% | |
| CTGAGAAAGATGCATTAATC+TGG | + | chr8_2:49008276-49008295 | Msa1252180:CDS | 35.0% | |
| ! | AGGCAAGGTATTAATTGACT+TGG | + | chr8_2:49008319-49008338 | Msa1252180:intron | 35.0% |
| TCAACGTGAGTCTAAATCAT+GGG | - | chr8_2:49008372-49008391 | None:intergenic | 35.0% | |
| ATCAACGTGAGTCTAAATCA+TGG | - | chr8_2:49008373-49008392 | None:intergenic | 35.0% | |
| ! | TTCTCTTGTTTAACACCATC+AGG | + | chr8_2:49008412-49008431 | Msa1252180:intron | 35.0% |
| ATTCCGGACACAGTAAAATA+TGG | - | chr8_2:49008533-49008552 | None:intergenic | 35.0% | |
| !! | ATCCTGCTTTATTTGTCTGT+TGG | + | chr8_2:49008639-49008658 | Msa1252180:intron | 35.0% |
| TCTATTAACACTCAGTGAAC+TGG | - | chr8_2:49008747-49008766 | None:intergenic | 35.0% | |
| AAAGGCTCATTAACTGACAA+AGG | - | chr8_2:49008982-49009001 | None:intergenic | 35.0% | |
| TATTGAGAAAAGTGGGTATC+AGG | + | chr8_2:49009070-49009089 | Msa1252180:CDS | 35.0% | |
| ATTGTTATGTATCTCACCCA+TGG | - | chr8_2:49009101-49009120 | None:intergenic | 35.0% | |
| ATGGGTGAGATACATAACAA+TGG | + | chr8_2:49009100-49009119 | Msa1252180:CDS | 35.0% | |
| TTGACAACAACGATCAAAGA+TGG | - | chr8_2:49009431-49009450 | None:intergenic | 35.0% | |
| !!! | TACAGTTTTAAGAGAACCAG+TGG | + | chr8_2:49009465-49009484 | Msa1252180:three_prime_UTR | 35.0% |
| TTTGGAAGGAGACAGATTAT+AGG | + | chr8_2:49009494-49009513 | Msa1252180:three_prime_UTR | 35.0% | |
| ACATTTGGTCCTTCATACAT+GGG | - | chr8_2:49009542-49009561 | None:intergenic | 35.0% | |
| TACATTTGGTCCTTCATACA+TGG | - | chr8_2:49009543-49009562 | None:intergenic | 35.0% | |
| GTTCAGTTCGCAATGTTTGA+AGG | - | chr8_2:49004127-49004146 | None:intergenic | 40.0% | |
| GATCGAAAATGGATCAGGAT+CGG | - | chr8_2:49004172-49004191 | None:intergenic | 40.0% | |
| CTCTTCCTTCTCGATATCAA+AGG | + | chr8_2:49004249-49004268 | Msa1252180:CDS | 40.0% | |
| TAAGAACGCGTGATTTCATC+TGG | + | chr8_2:49004556-49004575 | Msa1252180:intron | 40.0% | |
| GACATGTGACGAACATATGT+CGG | - | chr8_2:49004621-49004640 | None:intergenic | 40.0% | |
| AGATACAAACACGTTGACAC+TGG | + | chr8_2:49004729-49004748 | Msa1252180:intron | 40.0% | |
| ! | GGTGCTGCATAGGTTAATAA+TGG | + | chr8_2:49004825-49004844 | Msa1252180:intron | 40.0% |
| GCTGCATAGGTTAATAATGG+TGG | + | chr8_2:49004828-49004847 | Msa1252180:intron | 40.0% | |
| TTTGTCTAGTTGCTGTCATG+AGG | - | chr8_2:49005032-49005051 | None:intergenic | 40.0% | |
| CGATTCGATGTAGGAAGAAA+AGG | - | chr8_2:49005074-49005093 | None:intergenic | 40.0% | |
| TCAAGTAGTTCATACTGCCA+AGG | - | chr8_2:49005354-49005373 | None:intergenic | 40.0% | |
| ATCTTTGCCTCGGTATATTG+GGG | - | chr8_2:49005399-49005418 | None:intergenic | 40.0% | |
| GAATCTTTGCCTCGGTATAT+TGG | - | chr8_2:49005401-49005420 | None:intergenic | 40.0% | |
| CTCACTAAGAATCTTTGCCT+CGG | - | chr8_2:49005409-49005428 | None:intergenic | 40.0% | |
| CTGTAACAAACGCTGTATCT+TGG | + | chr8_2:49005481-49005500 | Msa1252180:CDS | 40.0% | |
| AAAGAGATCATGAGGCTTCA+AGG | - | chr8_2:49005843-49005862 | None:intergenic | 40.0% | |
| GAGCTCAAAAAGAGATCATG+AGG | - | chr8_2:49005851-49005870 | None:intergenic | 40.0% | |
| ATCGCTTATCTTTGGACCTT+AGG | - | chr8_2:49005944-49005963 | None:intergenic | 40.0% | |
| TGTTGAAATAGCTCACACAC+GGG | + | chr8_2:49005993-49006012 | Msa1252180:intron | 40.0% | |
| GGTGTTTGGAAGGGTTTATT+TGG | + | chr8_2:49006043-49006062 | Msa1252180:intron | 40.0% | |
| TCATAAACACAAGTGCCCTA+AGG | + | chr8_2:49006218-49006237 | Msa1252180:intron | 40.0% | |
| CATAAACACAAGTGCCCTAA+GGG | + | chr8_2:49006219-49006238 | Msa1252180:intron | 40.0% | |
| !! | ATGAGACTTTTGAGGGGAAT+TGG | + | chr8_2:49006347-49006366 | Msa1252180:intron | 40.0% |
| GCATAACGCTCTGCAATATT+TGG | + | chr8_2:49006372-49006391 | Msa1252180:intron | 40.0% | |
| TAACGCTCTGCAATATTTGG+CGG | + | chr8_2:49006375-49006394 | Msa1252180:intron | 40.0% | |
| ! | ATAGGGATGGGACTTTTGTA+TGG | + | chr8_2:49006422-49006441 | Msa1252180:intron | 40.0% |
| TAATTTACACTCCTGGAGCT+AGG | + | chr8_2:49006478-49006497 | Msa1252180:intron | 40.0% | |
| AATTTACACTCCTGGAGCTA+GGG | + | chr8_2:49006479-49006498 | Msa1252180:intron | 40.0% | |
| TGTCCAAGCTATTCTACTTG+AGG | + | chr8_2:49006541-49006560 | Msa1252180:intron | 40.0% | |
| GCACTTGTTTCAATTGCTAG+AGG | - | chr8_2:49006914-49006933 | None:intergenic | 40.0% | |
| TATCGGATGTGTTTCAACTC+TGG | - | chr8_2:49006999-49007018 | None:intergenic | 40.0% | |
| TATCACTCTCATTTCGGTAC+AGG | - | chr8_2:49007049-49007068 | None:intergenic | 40.0% | |
| ! | ATTGAGGACTGGTAGATGTA+TGG | - | chr8_2:49007191-49007210 | None:intergenic | 40.0% |
| CGACTAAAACAGTGAAGTAG+CGG | - | chr8_2:49007234-49007253 | None:intergenic | 40.0% | |
| !!! | CGCTACTTCACTGTTTTAGT+CGG | + | chr8_2:49007232-49007251 | Msa1252180:intron | 40.0% |
| !!! | GCTACTTCACTGTTTTAGTC+GGG | + | chr8_2:49007233-49007252 | Msa1252180:intron | 40.0% |
| ACAGTATAGGCTTACACCAA+TGG | - | chr8_2:49007317-49007336 | None:intergenic | 40.0% | |
| GGTGTAAGCCTATACTGTTA+TGG | + | chr8_2:49007319-49007338 | Msa1252180:intron | 40.0% | |
| ATTTCCTTTATCCCACCTGA+TGG | + | chr8_2:49007758-49007777 | Msa1252180:CDS | 40.0% | |
| TTTCCTTTATCCCACCTGAT+GGG | + | chr8_2:49007759-49007778 | Msa1252180:CDS | 40.0% | |
| AATCAAATGACCCATCAGGT+GGG | - | chr8_2:49007772-49007791 | None:intergenic | 40.0% | |
| AAATCAAATGACCCATCAGG+TGG | - | chr8_2:49007773-49007792 | None:intergenic | 40.0% | |
| CCCAAAATAAAGGCTTAACC+TGG | - | chr8_2:49007914-49007933 | None:intergenic | 40.0% | |
| !!! | GGTTAAGCCTTTATTTTGGG+TGG | + | chr8_2:49007914-49007933 | Msa1252180:intron | 40.0% |
| TGTGCTTCCACCCAAAATAA+AGG | - | chr8_2:49007924-49007943 | None:intergenic | 40.0% | |
| GGAGTCAATTTAAGGAACGT+AGG | + | chr8_2:49007991-49008010 | Msa1252180:CDS | 40.0% | |
| ! | GTTTCCCCTATTTTCCATCA+TGG | + | chr8_2:49008048-49008067 | Msa1252180:intron | 40.0% |
| AGAAGTAAATACATACGGGG+TGG | - | chr8_2:49008131-49008150 | None:intergenic | 40.0% | |
| TCAATTAATACCTTGCCTCC+AGG | - | chr8_2:49008317-49008336 | None:intergenic | 40.0% | |
| ! | ACCATCAGGAGTACATGTTA+AGG | + | chr8_2:49008426-49008445 | Msa1252180:intron | 40.0% |
| ! | CCATCAGGAGTACATGTTAA+GGG | + | chr8_2:49008427-49008446 | Msa1252180:intron | 40.0% |
| ! | ACGTATAGGAGCTTTTCTCT+CGG | - | chr8_2:49008495-49008514 | None:intergenic | 40.0% |
| ! | TTTTACTGTGTCCGGAATAC+AGG | + | chr8_2:49008535-49008554 | Msa1252180:CDS | 40.0% |
| CACCAACAGACAAATAAAGC+AGG | - | chr8_2:49008644-49008663 | None:intergenic | 40.0% | |
| ! | GCAAAATATTTTCAGCCCCA+TGG | - | chr8_2:49008691-49008710 | None:intergenic | 40.0% |
| GTGCGCAAAACTGTTAATCA+TGG | - | chr8_2:49008865-49008884 | None:intergenic | 40.0% | |
| GTGAGATACATAACAATGGC+TGG | + | chr8_2:49009104-49009123 | Msa1252180:CDS | 40.0% | |
| CAATGATCAATGACTGAAGC+AGG | + | chr8_2:49009202-49009221 | Msa1252180:three_prime_UTR | 40.0% | |
| TCAACACACAATTGACCGAA+GGG | - | chr8_2:49009367-49009386 | None:intergenic | 40.0% | |
| ATCAACACACAATTGACCGA+AGG | - | chr8_2:49009368-49009387 | None:intergenic | 40.0% | |
| !!! | GAGAACCAGTGGTTTGTTTT+TGG | + | chr8_2:49009476-49009495 | Msa1252180:three_prime_UTR | 40.0% |
| !!! | ACCAGTGGTTTGTTTTTGGA+AGG | + | chr8_2:49009480-49009499 | Msa1252180:three_prime_UTR | 40.0% |
| TCCTTCCAAAAACAAACCAC+TGG | - | chr8_2:49009484-49009503 | None:intergenic | 40.0% | |
| GTATTGCAAACGGCATCGTT+TGG | + | chr8_2:49004014-49004033 | Msa1252180:five_prime_UTR | 45.0% | |
| TGTTAGATTCGTGCTGAGGT+GGG | - | chr8_2:49004066-49004085 | None:intergenic | 45.0% | |
| ATGTTAGATTCGTGCTGAGG+TGG | - | chr8_2:49004067-49004086 | None:intergenic | 45.0% | |
| GCAATGTTAGATTCGTGCTG+AGG | - | chr8_2:49004070-49004089 | None:intergenic | 45.0% | |
| CAGTTCGCAATGTTTGAAGG+TGG | - | chr8_2:49004124-49004143 | None:intergenic | 45.0% | |
| GATCGGATCGAAAATGGATC+AGG | - | chr8_2:49004177-49004196 | None:intergenic | 45.0% | |
| AACCTCTTTCTCGATGAGCT+TGG | - | chr8_2:49004340-49004359 | None:intergenic | 45.0% | |
| ACGCGTGATTTCATCTGGAA+TGG | + | chr8_2:49004561-49004580 | Msa1252180:intron | 45.0% | |
| CGTCACATGTCAGTGTCTAT+TGG | + | chr8_2:49004630-49004649 | Msa1252180:intron | 45.0% | |
| GATTGGTATGTGATTGAGGC+AGG | + | chr8_2:49005186-49005205 | Msa1252180:intron | 45.0% | |
| TCTTTGCCTCGGTATATTGG+GGG | - | chr8_2:49005398-49005417 | None:intergenic | 45.0% | |
| ! | ACAGCGTTTGTTACAGCCAT+GGG | - | chr8_2:49005477-49005496 | None:intergenic | 45.0% |
| ! | TACAGCGTTTGTTACAGCCA+TGG | - | chr8_2:49005478-49005497 | None:intergenic | 45.0% |
| CTGTATCTTGGCGTAGTGAA+GGG | + | chr8_2:49005493-49005512 | Msa1252180:CDS | 45.0% | |
| ! | TCAGGTTTTCTTGGATGTGG+TGG | + | chr8_2:49005616-49005635 | Msa1252180:intron | 45.0% |
| TTTCAAGGACGTGTTTGAGC+AGG | + | chr8_2:49005800-49005819 | Msa1252180:intron | 45.0% | |
| TTCAAGGACGTGTTTGAGCA+GGG | + | chr8_2:49005801-49005820 | Msa1252180:intron | 45.0% | |
| !! | TCCTTGGGAAAGTGTTCCTA+AGG | + | chr8_2:49005925-49005944 | Msa1252180:intron | 45.0% |
| ACCTTAGGAACACTTTCCCA+AGG | - | chr8_2:49005929-49005948 | None:intergenic | 45.0% | |
| ! | TTACCAGTAGGGTGTTTGGA+AGG | + | chr8_2:49006033-49006052 | Msa1252180:intron | 45.0% |
| ! | TACCAGTAGGGTGTTTGGAA+GGG | + | chr8_2:49006034-49006053 | Msa1252180:intron | 45.0% |
| AACGCTCTGCAATATTTGGC+GGG | + | chr8_2:49006376-49006395 | Msa1252180:intron | 45.0% | |
| !! | TATTTGGCGGGTTTACAAGC+TGG | + | chr8_2:49006388-49006407 | Msa1252180:intron | 45.0% |
| GTATGGAACTGCCAGCATAA+AGG | + | chr8_2:49006439-49006458 | Msa1252180:intron | 45.0% | |
| TACTTCAGGGACCTTTATGC+TGG | - | chr8_2:49006453-49006472 | None:intergenic | 45.0% | |
| TATCTTAAGTCCCTAGCTCC+AGG | - | chr8_2:49006492-49006511 | None:intergenic | 45.0% | |
| TGCCAGAATTTGACATCCCA+TGG | + | chr8_2:49006973-49006992 | Msa1252180:intron | 45.0% | |
| TGTGTTTCAACTCTGGCCAT+GGG | - | chr8_2:49006992-49007011 | None:intergenic | 45.0% | |
| ATGTGTTTCAACTCTGGCCA+TGG | - | chr8_2:49006993-49007012 | None:intergenic | 45.0% | |
| AATTGCCACACCCACACATA+CGG | + | chr8_2:49007101-49007120 | Msa1252180:intron | 45.0% | |
| !!! | TCACTGTTTTAGTCGGGTCT+TGG | + | chr8_2:49007239-49007258 | Msa1252180:intron | 45.0% |
| GGTAAAAGGGTAAAGGCTCA+AGG | + | chr8_2:49007287-49007306 | Msa1252180:intron | 45.0% | |
| AAAGGCTCAAGGTTCACCAT+TGG | + | chr8_2:49007298-49007317 | Msa1252180:intron | 45.0% | |
| TCTTCCAGTGAGAACACAGT+GGG | - | chr8_2:49007358-49007377 | None:intergenic | 45.0% | |
| !! | CAAGTCAATCGCTTTTCCCT+TGG | - | chr8_2:49007544-49007563 | None:intergenic | 45.0% |
| CAAGGGAAAAGCGATTGACT+TGG | + | chr8_2:49007542-49007561 | Msa1252180:CDS | 45.0% | |
| ! | TTGATGAAGGTGTGTGCGAT+TGG | + | chr8_2:49007712-49007731 | Msa1252180:intron | 45.0% |
| GAAACCTTCTGTTTGAGTGG+TGG | + | chr8_2:49007837-49007856 | Msa1252180:intron | 45.0% | |
| ATGCAACCACTCCAAATGTG+CGG | + | chr8_2:49008225-49008244 | Msa1252180:CDS | 45.0% | |
| TCCAAATGTGCGGACATCAA+TGG | + | chr8_2:49008235-49008254 | Msa1252180:CDS | 45.0% | |
| CCAAATGTGCGGACATCAAT+GGG | + | chr8_2:49008236-49008255 | Msa1252180:CDS | 45.0% | |
| ! | AAGATCTTTTCCTGGAGGCA+AGG | + | chr8_2:49008304-49008323 | Msa1252180:CDS | 45.0% |
| CCCTTAACATGTACTCCTGA+TGG | - | chr8_2:49008430-49008449 | None:intergenic | 45.0% | |
| ! | CGTATAGGAGCTTTTCTCTC+GGG | - | chr8_2:49008494-49008513 | None:intergenic | 45.0% |
| TGATCAATGACTGAAGCAGG+TGG | + | chr8_2:49009205-49009224 | Msa1252180:three_prime_UTR | 45.0% | |
| ATTTGGGCAACCAGAACAGA+TGG | + | chr8_2:49009266-49009285 | Msa1252180:three_prime_UTR | 45.0% | |
| GAGCAACTTACCATCTGTTC+TGG | - | chr8_2:49009279-49009298 | None:intergenic | 45.0% | |
| GAAGGGAGTTGTAAGAGTTC+GGG | - | chr8_2:49009350-49009369 | None:intergenic | 45.0% | |
| CGAAGGGAGTTGTAAGAGTT+CGG | - | chr8_2:49009351-49009370 | None:intergenic | 45.0% | |
| CGAACTCTTACAACTCCCTT+CGG | + | chr8_2:49009349-49009368 | Msa1252180:three_prime_UTR | 45.0% | |
| GTGATACAGCCCATGTATGA+AGG | + | chr8_2:49009530-49009549 | Msa1252180:three_prime_UTR | 45.0% | |
| GGATCGGATCGGATCGAAAA+TGG | - | chr8_2:49004183-49004202 | None:intergenic | 50.0% | |
| CGGAATCACTCTCCAATGTC+AGG | + | chr8_2:49004213-49004232 | Msa1252180:exon | 50.0% | |
| ATCGAGAAGGAAGAGAGCAG+AGG | - | chr8_2:49004244-49004263 | None:intergenic | 50.0% | |
| TCAAAGGCCGCGTTCTCATT+TGG | + | chr8_2:49004265-49004284 | Msa1252180:CDS | 50.0% | |
| AATCGCGCCAAATGAGAACG+CGG | - | chr8_2:49004275-49004294 | None:intergenic | 50.0% | |
| CTCATTTGGCGCGATTATCG+CGG | + | chr8_2:49004279-49004298 | Msa1252180:CDS | 50.0% | |
| ! | GAAGCGTTCAGCTTCAACAG+CGG | - | chr8_2:49004313-49004332 | None:intergenic | 50.0% |
| CACCAAGCTCATCGAGAAAG+AGG | + | chr8_2:49004335-49004354 | Msa1252180:CDS | 50.0% | |
| AGACACCGGATATGCCTAGT+CGG | + | chr8_2:49004804-49004823 | Msa1252180:intron | 50.0% | |
| !! | TAACCTATGCAGCACCGACT+AGG | - | chr8_2:49004821-49004840 | None:intergenic | 50.0% |
| TGGTTACCCCCAATATACCG+AGG | + | chr8_2:49005389-49005408 | Msa1252180:CDS | 50.0% | |
| AGTTACACAGAGACCTCCCA+TGG | + | chr8_2:49005458-49005477 | Msa1252180:CDS | 50.0% | |
| GCTGTATCTTGGCGTAGTGA+AGG | + | chr8_2:49005492-49005511 | Msa1252180:CDS | 50.0% | |
| AACCCTTCCAAACACCCTAC+TGG | - | chr8_2:49006039-49006058 | None:intergenic | 50.0% | |
| GGCCATGGGATGTCAAATTC+TGG | - | chr8_2:49006978-49006997 | None:intergenic | 50.0% | |
| ! | GTGTGGGTGTGGCAATTTTG+AGG | - | chr8_2:49007098-49007117 | None:intergenic | 50.0% |
| AAGTACGCTGCCGTATGTGT+GGG | - | chr8_2:49007114-49007133 | None:intergenic | 50.0% | |
| AACAGTGAAGTAGCGGTAGC+AGG | - | chr8_2:49007227-49007246 | None:intergenic | 50.0% | |
| GTCTTCCAGTGAGAACACAG+TGG | - | chr8_2:49007359-49007378 | None:intergenic | 50.0% | |
| GGCATGCCAGAGTGTAAACT+TGG | + | chr8_2:49007477-49007496 | Msa1252180:CDS | 50.0% | |
| !! | GGGAAAAGCGATTGACTTGG+AGG | + | chr8_2:49007545-49007564 | Msa1252180:CDS | 50.0% |
| TGACCCATCAGGTGGGATAA+AGG | - | chr8_2:49007765-49007784 | None:intergenic | 50.0% | |
| GACATACAGACTCAGCACAC+AGG | + | chr8_2:49007796-49007815 | Msa1252180:CDS | 50.0% | |
| TACAGACTCAGCACACAGGT+TGG | + | chr8_2:49007800-49007819 | Msa1252180:intron | 50.0% | |
| GTCACCACCACTCAAACAGA+AGG | - | chr8_2:49007844-49007863 | None:intergenic | 50.0% | |
| ! | TTTGGAGTGGTTGCATCAGC+AGG | - | chr8_2:49008221-49008240 | None:intergenic | 50.0% |
| TGATGTCCGCACATTTGGAG+TGG | - | chr8_2:49008234-49008253 | None:intergenic | 50.0% | |
| CCCATTGATGTCCGCACATT+TGG | - | chr8_2:49008239-49008258 | None:intergenic | 50.0% | |
| TCTTCCCAGCATAACAGACG+AGG | + | chr8_2:49008460-49008479 | Msa1252180:CDS | 50.0% | |
| GCTTCCTCGTCTGTTATGCT+GGG | - | chr8_2:49008467-49008486 | None:intergenic | 50.0% | |
| TGCTTCCTCGTCTGTTATGC+TGG | - | chr8_2:49008468-49008487 | None:intergenic | 50.0% | |
| TGGGTATCAGGCTCTTCCAT+GGG | + | chr8_2:49009082-49009101 | Msa1252180:CDS | 50.0% | |
| ! | TGGCTGGAGAGTATGAGCTA+AGG | + | chr8_2:49009120-49009139 | Msa1252180:CDS | 50.0% |
| GTCTGTGGAGGCAGTCTTAA+GGG | + | chr8_2:49009227-49009246 | Msa1252180:three_prime_UTR | 50.0% | |
| TCTGTGGAGGCAGTCTTAAG+GGG | + | chr8_2:49009228-49009247 | Msa1252180:three_prime_UTR | 50.0% | |
| TAGATTCGTGCTGAGGTGGG+TGG | - | chr8_2:49004063-49004082 | None:intergenic | 55.0% | |
| ATTCCGAGCCTGGATCGGAT+CGG | - | chr8_2:49004199-49004218 | None:intergenic | 55.0% | |
| GAGTGATTCCGAGCCTGGAT+CGG | - | chr8_2:49004204-49004223 | None:intergenic | 55.0% | |
| TTGGAGAGTGATTCCGAGCC+TGG | - | chr8_2:49004209-49004228 | None:intergenic | 55.0% | |
| CGCGGCCTTTGATATCGAGA+AGG | - | chr8_2:49004257-49004276 | None:intergenic | 55.0% | |
| !! | CAGCACCGACTAGGCATATC+CGG | - | chr8_2:49004812-49004831 | None:intergenic | 55.0% |
| !! | ATGCCTAGTCGGTGCTGCAT+AGG | + | chr8_2:49004815-49004834 | Msa1252180:intron | 55.0% |
| GCAGGGAGATCAACAGTCTC+AGG | + | chr8_2:49004948-49004967 | Msa1252180:intron | 55.0% | |
| ! | GCGTTTGTTACAGCCATGGG+AGG | - | chr8_2:49005474-49005493 | None:intergenic | 55.0% |
| AGCTCACACACGGGCAAGTT+AGG | + | chr8_2:49006002-49006021 | Msa1252180:intron | 55.0% | |
| CAAGTACGCTGCCGTATGTG+TGG | - | chr8_2:49007115-49007134 | None:intergenic | 55.0% | |
| CACACATACGGCAGCGTACT+TGG | + | chr8_2:49007113-49007132 | Msa1252180:intron | 55.0% | |
| !! | GGCAGGTAGGTATTGAGGAC+TGG | - | chr8_2:49007202-49007221 | None:intergenic | 55.0% |
| ! | AGGCAGGCAGGTAGGTATTG+AGG | - | chr8_2:49007207-49007226 | None:intergenic | 55.0% |
| GCACAAGGTAGAGCGACCAA+GGG | + | chr8_2:49007525-49007544 | Msa1252180:CDS | 55.0% | |
| GTGGGTATCAGGCTCTTCCA+TGG | + | chr8_2:49009081-49009100 | Msa1252180:CDS | 55.0% | |
| TGACTGAAGCAGGTGGTCTG+TGG | + | chr8_2:49009212-49009231 | Msa1252180:three_prime_UTR | 55.0% | |
| GGTCTGTGGAGGCAGTCTTA+AGG | + | chr8_2:49009226-49009245 | Msa1252180:three_prime_UTR | 55.0% | |
| GATCCGATCCGATCCGATCC+AGG | + | chr8_2:49004188-49004207 | Msa1252180:five_prime_UTR | 60.0% | |
| GAGCCTGGATCGGATCGGAT+CGG | - | chr8_2:49004194-49004213 | None:intergenic | 60.0% | |
| GATCCGATCCGATCCAGGCT+CGG | + | chr8_2:49004193-49004212 | Msa1252180:five_prime_UTR | 60.0% | |
| GCAGAGGCTGCACCTGACAT+TGG | - | chr8_2:49004228-49004247 | None:intergenic | 60.0% | |
| GTGAAGTAGCGGTAGCAGGC+AGG | - | chr8_2:49007223-49007242 | None:intergenic | 60.0% | |
| AGGGCCCACTGTGTTCTCAC+TGG | + | chr8_2:49007351-49007370 | Msa1252180:intron | 60.0% | |
| GGCACAAGGTAGAGCGACCA+AGG | + | chr8_2:49007524-49007543 | Msa1252180:CDS | 60.0% | |
| GTGGTTGCATCAGCAGGCAC+AGG | - | chr8_2:49008215-49008234 | None:intergenic | 60.0% | |
| CTGAAGCAGGTGGTCTGTGG+AGG | + | chr8_2:49009215-49009234 | Msa1252180:three_prime_UTR | 60.0% | |
| CGCTGCCGTATGTGTGGGTG+TGG | - | chr8_2:49007109-49007128 | None:intergenic | 65.0% | |
| AGTAGCGGTAGCAGGCAGGC+AGG | - | chr8_2:49007219-49007238 | None:intergenic | 65.0% | |
| GCGGTAGCAGGCAGGCAGGT+AGG | - | chr8_2:49007215-49007234 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 49003943 | 49009615 | 49003943 | ID=Msa1252180;Name=Msa1252180 |
| chr8_2 | mRNA | 49003943 | 49009615 | 49003943 | ID=Msa1252180-mRNA-1;Parent=Msa1252180;Name=Msa1252180-mRNA-1;_AED=0.09;_eAED=0.09;_QI=285|1|1|1|1|1|11|464|428 |
| chr8_2 | exon | 49003943 | 49004356 | 49003943 | ID=Msa1252180-mRNA-1:exon:14795;Parent=Msa1252180-mRNA-1 |
| chr8_2 | exon | 49004952 | 49005098 | 49004952 | ID=Msa1252180-mRNA-1:exon:14796;Parent=Msa1252180-mRNA-1 |
| chr8_2 | exon | 49005208 | 49005270 | 49005208 | ID=Msa1252180-mRNA-1:exon:14797;Parent=Msa1252180-mRNA-1 |
| chr8_2 | exon | 49005360 | 49005536 | 49005360 | ID=Msa1252180-mRNA-1:exon:14798;Parent=Msa1252180-mRNA-1 |
| chr8_2 | exon | 49005620 | 49005723 | 49005620 | ID=Msa1252180-mRNA-1:exon:14799;Parent=Msa1252180-mRNA-1 |
| chr8_2 | exon | 49007476 | 49007583 | 49007476 | ID=Msa1252180-mRNA-1:exon:14800;Parent=Msa1252180-mRNA-1 |
| chr8_2 | exon | 49007721 | 49007817 | 49007721 | ID=Msa1252180-mRNA-1:exon:14801;Parent=Msa1252180-mRNA-1 |
| chr8_2 | exon | 49007915 | 49008012 | 49007915 | ID=Msa1252180-mRNA-1:exon:14802;Parent=Msa1252180-mRNA-1 |
| chr8_2 | exon | 49008184 | 49008325 | 49008184 | ID=Msa1252180-mRNA-1:exon:14803;Parent=Msa1252180-mRNA-1 |
| chr8_2 | exon | 49008434 | 49008556 | 49008434 | ID=Msa1252180-mRNA-1:exon:14804;Parent=Msa1252180-mRNA-1 |
| chr8_2 | exon | 49009053 | 49009615 | 49009053 | ID=Msa1252180-mRNA-1:exon:14805;Parent=Msa1252180-mRNA-1 |
| chr8_2 | five_prime_UTR | 49003943 | 49004227 | 49003943 | ID=Msa1252180-mRNA-1:five_prime_utr;Parent=Msa1252180-mRNA-1 |
| chr8_2 | CDS | 49004228 | 49004356 | 49004228 | ID=Msa1252180-mRNA-1:cds;Parent=Msa1252180-mRNA-1 |
| chr8_2 | CDS | 49004952 | 49005098 | 49004952 | ID=Msa1252180-mRNA-1:cds;Parent=Msa1252180-mRNA-1 |
| chr8_2 | CDS | 49005208 | 49005270 | 49005208 | ID=Msa1252180-mRNA-1:cds;Parent=Msa1252180-mRNA-1 |
| chr8_2 | CDS | 49005360 | 49005536 | 49005360 | ID=Msa1252180-mRNA-1:cds;Parent=Msa1252180-mRNA-1 |
| chr8_2 | CDS | 49005620 | 49005723 | 49005620 | ID=Msa1252180-mRNA-1:cds;Parent=Msa1252180-mRNA-1 |
| chr8_2 | CDS | 49007476 | 49007583 | 49007476 | ID=Msa1252180-mRNA-1:cds;Parent=Msa1252180-mRNA-1 |
| chr8_2 | CDS | 49007721 | 49007817 | 49007721 | ID=Msa1252180-mRNA-1:cds;Parent=Msa1252180-mRNA-1 |
| chr8_2 | CDS | 49007915 | 49008012 | 49007915 | ID=Msa1252180-mRNA-1:cds;Parent=Msa1252180-mRNA-1 |
| chr8_2 | CDS | 49008184 | 49008325 | 49008184 | ID=Msa1252180-mRNA-1:cds;Parent=Msa1252180-mRNA-1 |
| chr8_2 | CDS | 49008434 | 49008556 | 49008434 | ID=Msa1252180-mRNA-1:cds;Parent=Msa1252180-mRNA-1 |
| chr8_2 | CDS | 49009053 | 49009151 | 49009053 | ID=Msa1252180-mRNA-1:cds;Parent=Msa1252180-mRNA-1 |
| chr8_2 | three_prime_UTR | 49009152 | 49009615 | 49009152 | ID=Msa1252180-mRNA-1:three_prime_utr;Parent=Msa1252180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
