AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0818070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0818070 MtrunA17_Chr3g0113321 84.547 453 66 4 19 468 20 471 0.0 787
Msa0818070 MtrunA17_Chr5g0403931 41.758 455 255 6 1 448 11 462 8.26e-129 382
Msa0818070 MtrunA17_Chr8g0341951 39.451 474 271 7 4 467 6 473 2.38e-124 370
Msa0818070 MtrunA17_Chr5g0436981 97.674 172 4 0 1 172 1 172 1.35e-120 350
Msa0818070 MtrunA17_Chr8g0372411 40.406 443 248 7 29 462 40 475 1.67e-120 360
Msa0818070 MtrunA17_Chr8g0373441 43.112 392 213 6 9 393 16 404 6.26e-113 339
Msa0818070 MtrunA17_Chr7g0226771 37.363 455 276 5 1 450 5 455 1.15e-111 338
Msa0818070 MtrunA17_Chr6g0478161 34.511 481 301 6 1 472 22 497 8.28e-104 318
Msa0818070 MtrunA17_Chr6g0455461 36.142 451 272 8 5 450 10 449 1.01e-102 315
Msa0818070 MtrunA17_Chr3g0078411 36.184 456 274 9 1 450 5 449 1.49e-102 314
Msa0818070 MtrunA17_Chr5g0397971 36.161 448 278 4 27 469 30 474 7.86e-101 310
Msa0818070 MtrunA17_Chr7g0219961 34.222 450 281 7 5 450 10 448 1.10e-97 301
Msa0818070 MtrunA17_Chr5g0437001 88.125 160 6 1 326 472 1 160 5.15e-97 289
Msa0818070 MtrunA17_Chr5g0408181 33.117 462 291 9 3 460 11 458 1.72e-86 273
Msa0818070 MtrunA17_Chr5g0436991 95.522 134 6 0 168 301 22 155 8.72e-86 260
Msa0818070 MtrunA17_Chr8g0369791 31.681 464 298 9 2 460 11 460 3.34e-83 264
Msa0818070 MtrunA17_Chr4g0044851 34.524 420 254 7 27 438 36 442 8.63e-83 263
Msa0818070 MtrunA17_Chr1g0153371 33.333 441 275 8 4 436 10 439 8.55e-80 256
Msa0818070 MtrunA17_Chr2g0293421 33.025 433 275 6 14 436 31 458 3.13e-78 252
Msa0818070 MtrunA17_Chr4g0044841 32.798 436 272 7 15 441 23 446 2.59e-77 249
Msa0818070 MtrunA17_Chr5g0443401 32.829 463 282 15 1 447 9 458 3.34e-77 249
Msa0818070 MtrunA17_Chr1g0164371 33.030 439 278 7 4 438 22 448 2.23e-76 247
Msa0818070 MtrunA17_Chr8g0381571 31.136 440 277 9 18 440 33 463 1.53e-74 242
Msa0818070 MtrunA17_Chr2g0293411 30.538 465 306 7 14 465 27 487 4.75e-74 241
Msa0818070 MtrunA17_Chr8g0381541 30.921 456 282 10 5 436 13 459 1.03e-73 240
Msa0818070 MtrunA17_Chr3g0089361 33.803 426 253 13 27 438 39 449 4.64e-73 238
Msa0818070 MtrunA17_Chr5g0443731 31.264 435 285 8 19 444 21 450 2.97e-70 231
Msa0818070 MtrunA17_Chr8g0388921 29.958 474 310 12 1 460 7 472 1.45e-68 226
Msa0818070 MtrunA17_Chr5g0400421 30.684 453 272 10 28 455 45 480 1.59e-68 226
Msa0818070 MtrunA17_Chr3g0141801 32.450 453 280 9 24 460 37 479 1.78e-67 224
Msa0818070 MtrunA17_Chr3g0107501 29.194 459 299 10 28 472 33 479 1.46e-64 216
Msa0818070 MtrunA17_Chr8g0380471 29.175 473 312 13 1 460 9 471 3.01e-63 213
Msa0818070 MtrunA17_Chr3g0107511 27.950 483 323 10 4 472 8 479 4.01e-61 207
Msa0818070 MtrunA17_Chr3g0089351 32.540 378 238 10 67 438 1 367 4.78e-61 204
Msa0818070 MtrunA17_Chr5g0400411 30.909 440 285 10 27 453 44 477 7.58e-60 204
Msa0818070 MtrunA17_Chr8g0339861 31.206 423 274 9 24 436 41 456 2.00e-59 202
Msa0818070 MtrunA17_Chr8g0372711 32.944 428 261 11 30 444 48 462 1.05e-58 201
Msa0818070 MtrunA17_Chr8g0380931 29.284 461 276 13 11 443 47 485 9.06e-58 199
Msa0818070 MtrunA17_Chr5g0404861 50.641 156 73 3 310 463 4 157 4.16e-50 168
Msa0818070 MtrunA17_Chr5g0404881 33.641 217 140 2 8 220 13 229 3.19e-42 150
Msa0818070 MtrunA17_Chr8g0381551 27.575 301 195 8 18 301 33 327 5.95e-33 127
Msa0818070 MtrunA17_Chr8g0381561 44.037 109 58 1 332 440 9 114 5.49e-29 110
Msa0818070 MtrunA17_Chr1g0160851 26.464 461 288 20 13 438 19 463 2.64e-28 117
Msa0818070 MtrunA17_Chr4g0000171 26.733 303 191 10 23 306 38 328 4.09e-27 111
Msa0818070 MtrunA17_Chr1g0161671 24.342 304 216 6 9 301 12 312 1.11e-25 107
Msa0818070 MtrunA17_Chr6g0463551 33.161 193 111 5 179 358 2 189 1.52e-25 103
Msa0818070 MtrunA17_Chr4g0000151 44.762 105 54 2 332 436 12 112 4.93e-25 100
Msa0818070 MtrunA17_Chr1g0198191 22.772 505 340 13 3 470 21 512 7.54e-25 107
Msa0818070 MtrunA17_Chr0c19g0493771 30.472 233 150 4 204 433 390 613 1.27e-24 107
Msa0818070 MtrunA17_Chr4g0039901 24.573 468 287 14 22 446 29 473 2.90e-24 105
Msa0818070 MtrunA17_Chr3g0089381 28.972 214 143 4 169 376 2 212 6.70e-24 99.8
Msa0818070 MtrunA17_Chr8g0356001 25.261 479 303 19 2 438 7 472 9.75e-24 103
Msa0818070 MtrunA17_Chr1g0197851 25.527 474 301 19 1 438 4 461 3.06e-23 102
Msa0818070 MtrunA17_Chr4g0013471 26.936 297 190 11 28 307 43 329 4.30e-23 100
Msa0818070 MtrunA17_Chr1g0205361 25.105 474 302 21 2 438 6 463 4.52e-23 102
Msa0818070 MtrunA17_Chr1g0205371 26.793 474 290 22 6 438 7 464 7.47e-23 101
Msa0818070 MtrunA17_Chr8g0355961 24.689 482 302 18 2 438 7 472 1.04e-22 100
Msa0818070 MtrunA17_Chr1g0160861 29.437 231 152 7 215 438 78 304 1.07e-22 99.0
Msa0818070 MtrunA17_Chr1g0176831 32.394 213 134 4 244 450 297 505 1.14e-22 100
Msa0818070 MtrunA17_Chr5g0395381 23.718 468 286 17 4 438 9 438 1.85e-22 99.8
Msa0818070 MtrunA17_Chr2g0314731 32.243 214 133 5 244 450 267 475 1.89e-22 100
Msa0818070 MtrunA17_Chr1g0197881 25.159 473 303 18 1 438 4 460 2.62e-22 99.8
Msa0818070 MtrunA17_Chr1g0197891 25.265 471 302 18 2 438 7 461 7.08e-22 98.2
Msa0818070 MtrunA17_Chr3g0089291 27.615 239 162 6 67 299 1 234 1.01e-21 94.0
Msa0818070 MtrunA17_Chr1g0164211 24.609 447 294 14 23 438 26 460 1.09e-21 97.8
Msa0818070 MtrunA17_Chr5g0395321 29.146 199 133 4 244 438 269 463 4.22e-21 96.3
Msa0818070 MtrunA17_Chr1g0197871 24.841 471 304 19 2 438 7 461 2.31e-20 93.6
Msa0818070 MtrunA17_Chr3g0084921 25.000 500 286 19 1 443 15 482 2.81e-20 93.6
Msa0818070 MtrunA17_Chr8g0351801 26.571 350 210 10 136 445 149 491 2.84e-20 93.6
Msa0818070 MtrunA17_Chr4g0052851 28.646 192 126 4 257 446 276 458 3.16e-20 93.2
Msa0818070 MtrunA17_Chr2g0314721 31.308 214 135 5 244 450 278 486 3.62e-20 93.2
Msa0818070 MtrunA17_Chr5g0395331 30.198 202 129 5 244 438 274 470 4.43e-20 92.8
Msa0818070 MtrunA17_Chr4g0053621 24.828 290 185 9 165 446 207 471 6.18e-20 92.4
Msa0818070 MtrunA17_Chr7g0255531 27.917 240 158 6 242 470 266 501 1.52e-19 91.3
Msa0818070 MtrunA17_Chr5g0405001 21.648 522 334 20 1 471 19 516 1.88e-19 90.9
Msa0818070 MtrunA17_Chr2g0296661 28.019 207 139 4 242 446 274 472 1.89e-19 90.9
Msa0818070 MtrunA17_Chr6g0463541 39.640 111 62 2 354 463 2 108 3.24e-19 83.2
Msa0818070 MtrunA17_Chr7g0248991 29.101 189 125 2 204 392 172 351 3.68e-19 89.0
Msa0818070 MtrunA17_Chr2g0313791 27.667 300 176 13 165 441 212 493 3.69e-19 90.1
Msa0818070 MtrunA17_Chr4g0000161 24.746 295 197 10 23 301 38 323 4.85e-19 88.2
Msa0818070 MtrunA17_Chr5g0431501 23.312 459 295 17 28 445 33 475 5.17e-19 89.7
Msa0818070 MtrunA17_Chr5g0431461 23.312 459 295 17 28 445 33 475 5.17e-19 89.7
Msa0818070 MtrunA17_Chr6g0451811 30.636 173 106 5 267 430 1 168 5.26e-19 85.5
Msa0818070 MtrunA17_Chr5g0401691 27.869 183 125 3 257 438 300 476 8.00e-19 89.0
Msa0818070 MtrunA17_Chr7g0224551 23.045 486 301 17 7 439 4 469 9.06e-19 89.0
Msa0818070 MtrunA17_Chr6g0457421 28.926 242 156 8 212 445 252 485 1.03e-18 88.6
Msa0818070 MtrunA17_Chr4g0004601 28.364 275 157 9 191 441 255 513 1.43e-18 88.6
Msa0818070 MtrunA17_Chr1g0174441 22.433 263 183 5 216 461 262 520 1.86e-18 88.2
Msa0818070 MtrunA17_Chr4g0039391 27.570 214 147 4 230 439 260 469 1.91e-18 87.8
Msa0818070 MtrunA17_Chr3g0116741 22.385 478 316 15 2 441 24 484 2.85e-18 87.4
Msa0818070 MtrunA17_Chr4g0058281 25.521 192 137 3 256 445 299 486 4.06e-18 87.0
Msa0818070 MtrunA17_Chr7g0235551 26.606 218 142 4 235 438 261 474 4.41e-18 86.7
Msa0818070 MtrunA17_Chr4g0011851 28.947 190 115 5 258 438 3 181 4.81e-18 82.8
Msa0818070 MtrunA17_Chr5g0445461 21.199 467 323 13 4 438 13 466 5.12e-18 86.7
Msa0818070 MtrunA17_Chr2g0313831 27.338 278 163 9 189 441 235 498 5.84e-18 86.7
Msa0818070 MtrunA17_Chr2g0310391 20.343 467 333 14 1 437 1 458 7.81e-18 85.9
Msa0818070 MtrunA17_Chr8g0354531 26.894 264 167 8 189 431 355 613 1.09e-17 85.9
Msa0818070 MtrunA17_Chr1g0203141 25.969 258 171 6 219 463 263 513 1.20e-17 85.5
Msa0818070 MtrunA17_Chr3g0128461 29.150 247 137 8 218 439 263 496 1.37e-17 85.5
Msa0818070 MtrunA17_Chr2g0313811 27.000 300 178 13 165 441 229 510 1.47e-17 85.1
Msa0818070 MtrunA17_Chr5g0401681 26.702 191 131 3 257 446 285 467 1.53e-17 85.1
Msa0818070 MtrunA17_Chr5g0403321 24.099 444 287 15 26 429 32 465 1.56e-17 85.1
Msa0818070 MtrunA17_Chr8g0336361 25.347 288 161 9 199 439 250 530 1.60e-17 85.1
Msa0818070 MtrunA17_Chr4g0076161 21.661 277 186 6 175 438 211 469 3.98e-17 84.0
Msa0818070 MtrunA17_Chr7g0215181 27.500 240 157 7 212 442 253 484 4.30e-17 83.6
Msa0818070 MtrunA17_Chr2g0313801 27.019 322 195 14 165 467 217 517 5.02e-17 83.6
Msa0818070 MtrunA17_Chr2g0314781 31.707 164 104 4 290 450 4 162 5.10e-17 78.6
Msa0818070 MtrunA17_Chr6g0451781 27.458 295 181 12 201 468 270 558 5.41e-17 83.6
Msa0818070 MtrunA17_Chr2g0296651 24.291 494 299 19 1 446 1 467 5.45e-17 83.6
Msa0818070 MtrunA17_Chr7g0224561 22.587 487 302 17 7 439 4 469 5.83e-17 83.6
Msa0818070 MtrunA17_Chr7g0265611 27.966 236 153 5 215 438 253 483 5.86e-17 83.2
Msa0818070 MtrunA17_Chr2g0288661 26.689 296 187 9 192 464 229 517 6.37e-17 83.2
Msa0818070 MtrunA17_Chr5g0431511 20.704 483 329 15 28 467 33 504 7.32e-17 83.2
Msa0818070 MtrunA17_Chr3g0101631 21.250 480 318 13 3 445 13 469 7.96e-17 82.8
Msa0818070 MtrunA17_Chr7g0246221 21.622 481 321 15 5 442 6 473 8.40e-17 82.8
Msa0818070 MtrunA17_Chr2g0313771 26.923 286 171 10 165 431 225 491 8.71e-17 82.8
Msa0818070 MtrunA17_Chr4g0057001 24.883 213 140 5 259 465 305 503 1.40e-16 82.0
Msa0818070 MtrunA17_Chr4g0052881 24.359 234 167 4 215 446 243 468 1.51e-16 82.0
Msa0818070 MtrunA17_Chr2g0313781 26.692 266 163 10 199 441 254 510 1.75e-16 82.0
Msa0818070 MtrunA17_Chr4g0030711 23.750 320 219 8 163 471 210 515 1.83e-16 82.0
Msa0818070 MtrunA17_Chr8g0346261 24.519 208 147 4 243 443 314 518 1.93e-16 82.0
Msa0818070 MtrunA17_Chr1g0179811 24.578 415 259 16 61 432 105 508 2.43e-16 81.6
Msa0818070 MtrunA17_Chr7g0235261 28.000 275 158 10 191 441 234 492 2.64e-16 81.3
Msa0818070 MtrunA17_Chr3g0101581 22.814 469 321 14 1 438 10 468 2.65e-16 81.3
Msa0818070 MtrunA17_Chr8g0344181 22.414 464 284 15 25 438 35 472 3.42e-16 80.9
Msa0818070 MtrunA17_Chr8g0362481 24.865 185 131 2 259 439 225 405 3.69e-16 80.5
Msa0818070 MtrunA17_Chr4g0052861 24.312 218 156 3 230 446 258 467 5.49e-16 80.1
Msa0818070 MtrunA17_Chr2g0313821 26.298 289 178 10 165 437 217 486 6.07e-16 80.1
Msa0818070 MtrunA17_Chr4g0056951 22.967 209 149 4 259 465 300 498 7.22e-16 80.1
Msa0818070 MtrunA17_Chr6g0466941 31.492 181 109 6 260 430 306 481 8.36e-16 79.7
Msa0818070 MtrunA17_Chr1g0174461 24.057 212 148 3 234 436 264 471 8.77e-16 79.7
Msa0818070 MtrunA17_Chr5g0430101 20.964 477 323 15 2 438 5 467 9.07e-16 79.7
Msa0818070 MtrunA17_Chr7g0258221 24.691 243 166 4 232 461 260 498 9.73e-16 79.7
Msa0818070 MtrunA17_Chr1g0174431 26.136 176 118 3 271 438 1 172 1.01e-15 75.9
Msa0818070 MtrunA17_Chr7g0246181 27.059 255 170 7 199 442 223 472 1.54e-15 79.0
Msa0818070 MtrunA17_Chr4g0035921 19.394 495 315 15 2 438 11 479 1.83e-15 78.6
Msa0818070 MtrunA17_Chr4g0017411 25.654 191 133 3 257 446 273 455 1.86e-15 78.6
Msa0818070 MtrunA17_Chr1g0174451 23.318 223 156 4 234 446 265 482 2.41e-15 78.2
Msa0818070 MtrunA17_Chr8g0339331 24.519 416 270 12 62 437 70 481 2.70e-15 78.2
Msa0818070 MtrunA17_Chr4g0058261 25.131 191 135 4 250 438 313 497 3.00e-15 78.2
Msa0818070 MtrunA17_Chr1g0200961 24.070 511 309 19 7 466 6 488 3.52e-15 77.8
Msa0818070 MtrunA17_Chr4g0046351 23.043 230 158 4 223 437 246 471 3.70e-15 77.8
Msa0818070 MtrunA17_Chr3g0094171 20.921 478 314 18 5 438 18 475 4.84e-15 77.4
Msa0818070 MtrunA17_Chr4g0058231 28.736 174 118 3 267 438 298 467 6.03e-15 77.0
Msa0818070 MtrunA17_Chr4g0046681 24.044 183 127 5 256 430 16 194 7.21e-15 73.9
Msa0818070 MtrunA17_Chr6g0451691 26.639 244 137 8 218 430 259 491 7.55e-15 77.0
Msa0818070 MtrunA17_Chr4g0058211 28.235 170 116 3 271 438 19 184 8.33e-15 73.6
Msa0818070 MtrunA17_Chr6g0458561 27.039 233 146 7 216 430 265 491 9.14e-15 76.6
Msa0818070 MtrunA17_Chr3g0082701 30.556 180 111 6 260 430 314 488 1.04e-14 76.3
Msa0818070 MtrunA17_Chr8g0372251 24.390 246 156 5 216 438 233 471 1.13e-14 76.3
Msa0818070 MtrunA17_Chr8g0390881 25.306 245 160 8 210 438 233 470 1.17e-14 76.3
Msa0818070 MtrunA17_Chr8g0377341 22.709 251 181 6 199 442 255 499 1.17e-14 76.3
Msa0818070 MtrunA17_Chr4g0046331 24.569 232 154 6 223 437 246 473 1.30e-14 76.3
Msa0818070 MtrunA17_Chr4g0058191 28.249 177 121 3 264 438 284 456 1.63e-14 75.5
Msa0818070 MtrunA17_Chr3g0086661 26.766 269 170 9 193 438 208 472 1.81e-14 75.5
Msa0818070 MtrunA17_Chr6g0466901 32.044 181 108 7 260 430 305 480 1.91e-14 75.5
Msa0818070 MtrunA17_Chr3g0086651 26.394 269 171 9 193 438 208 472 1.94e-14 75.5
Msa0818070 MtrunA17_Chr5g0446161 25.000 184 133 2 256 438 287 466 2.07e-14 75.5
Msa0818070 MtrunA17_Chr5g0396521 26.415 212 121 5 256 437 333 539 2.21e-14 75.5
Msa0818070 MtrunA17_Chr4g0047631 25.316 237 161 5 214 438 246 478 3.16e-14 74.7
Msa0818070 MtrunA17_Chr2g0280121 22.222 432 286 11 54 442 58 482 3.44e-14 74.7
Msa0818070 MtrunA17_Chr6g0463561 27.059 170 121 3 3 170 13 181 3.70e-14 71.2
Msa0818070 MtrunA17_Chr4g0063221 22.927 410 260 16 64 432 94 488 3.72e-14 74.7
Msa0818070 MtrunA17_Chr4g0047641 26.512 215 146 4 232 438 272 482 3.81e-14 74.7
Msa0818070 MtrunA17_Chr1g0203151 24.409 254 172 6 223 463 263 509 4.05e-14 74.3
Msa0818070 MtrunA17_Chr4g0047661 28.736 174 118 4 267 438 314 483 4.09e-14 74.7
Msa0818070 MtrunA17_Chr3g0094231 26.733 202 134 5 247 438 271 468 4.90e-14 74.3
Msa0818070 MtrunA17_Chr5g0430031 25.833 240 156 10 216 438 236 470 5.01e-14 74.3
Msa0818070 MtrunA17_Chr1g0207841 26.486 185 126 3 258 438 302 480 5.62e-14 73.9
Msa0818070 MtrunA17_Chr6g0472311 27.885 208 132 6 243 439 283 483 5.65e-14 73.9
Msa0818070 MtrunA17_Chr8g0362701 22.703 185 135 2 259 439 294 474 6.48e-14 73.9
Msa0818070 MtrunA17_Chr4g0038271 22.424 495 316 20 4 442 58 540 6.56e-14 73.9
Msa0818070 MtrunA17_Chr2g0313761 24.806 258 164 8 207 441 243 493 6.79e-14 73.9
Msa0818070 MtrunA17_Chr5g0430131 22.979 235 161 7 219 438 240 469 6.80e-14 73.9
Msa0818070 MtrunA17_Chr1g0174481 23.750 240 162 4 216 438 233 468 8.12e-14 73.6
Msa0818070 MtrunA17_Chr5g0446151 24.615 195 132 3 250 438 282 467 9.80e-14 73.2
Msa0818070 MtrunA17_Chr2g0280081 25.652 230 161 5 218 442 753 977 1.13e-13 73.6
Msa0818070 MtrunA17_Chr2g0280081 25.926 189 135 4 259 442 288 476 1.27e-11 67.4
Msa0818070 MtrunA17_Chr4g0030701 25.792 221 150 5 259 471 298 512 1.20e-13 73.2
Msa0818070 MtrunA17_Chr7g0218611 25.405 185 133 2 259 442 290 470 1.32e-13 72.8
Msa0818070 MtrunA17_Chr5g0430081 27.222 180 122 5 263 438 294 468 1.59e-13 72.8
Msa0818070 MtrunA17_Chr5g0406651 27.528 178 123 3 263 438 290 463 1.77e-13 72.4
Msa0818070 MtrunA17_Chr1g0162811 25.352 213 147 4 233 438 259 466 2.45e-13 72.0
Msa0818070 MtrunA17_Chr4g0047691 27.488 211 141 7 236 438 275 481 2.98e-13 72.0
Msa0818070 MtrunA17_Chr3g0086691 24.101 278 187 8 181 438 199 472 3.02e-13 71.6
Msa0818070 MtrunA17_Chr1g0174471 22.326 215 153 4 234 438 279 489 3.47e-13 71.6
Msa0818070 MtrunA17_Chr8g0390871 25.581 172 122 3 269 438 25 192 3.57e-13 68.9
Msa0818070 MtrunA17_Chr5g0430071 26.203 187 130 6 257 439 142 324 4.55e-13 70.5
Msa0818070 MtrunA17_Chr2g0286091 21.849 476 326 17 24 465 37 500 5.32e-13 70.9
Msa0818070 MtrunA17_Chr1g0161641 37.179 78 46 1 359 436 13 87 6.15e-13 64.3
Msa0818070 MtrunA17_Chr7g0218601 24.468 188 129 3 259 442 291 469 7.74e-13 70.5
Msa0818070 MtrunA17_Chr5g0445421 25.134 187 124 4 259 438 342 519 8.43e-13 70.5
Msa0818070 MtrunA17_Chr2g0313751 24.903 257 168 8 181 417 242 493 9.30e-13 70.5
Msa0818070 MtrunA17_Chr4g0024771 20.459 479 329 16 1 445 13 473 1.24e-12 69.7
Msa0818070 MtrunA17_Chr6g0484841 21.670 503 316 20 14 456 23 507 1.27e-12 69.7
Msa0818070 MtrunA17_Chr4g0074581 23.564 505 294 21 3 441 36 514 1.46e-12 69.7
Msa0818070 MtrunA17_Chr2g0280261 24.479 192 139 3 250 439 274 461 1.48e-12 69.7
Msa0818070 MtrunA17_Chr8g0387101 26.840 231 157 6 218 442 254 478 1.80e-12 69.3
Msa0818070 MtrunA17_Chr8g0373431 41.791 67 35 1 403 469 4 66 1.96e-12 62.4
Msa0818070 MtrunA17_Chr1g0193811 25.769 260 170 8 219 463 263 514 2.58e-12 68.9
Msa0818070 MtrunA17_Chr6g0484811 21.987 473 314 20 9 438 11 471 2.71e-12 68.9
Msa0818070 MtrunA17_Chr7g0258211 23.590 195 135 2 262 446 296 486 4.82e-12 68.2
Msa0818070 MtrunA17_Chr6g0463791 24.157 178 124 3 274 445 300 472 5.27e-12 67.8
Msa0818070 MtrunA17_Chr6g0472221 23.798 416 264 15 73 463 137 524 7.14e-12 67.4
Msa0818070 MtrunA17_Chr6g0451641 25.523 239 149 9 215 430 248 480 7.50e-12 67.4
Msa0818070 MtrunA17_Chr6g0451751 28.090 178 116 4 261 430 314 487 8.52e-12 67.4
Msa0818070 MtrunA17_Chr4g0014051 24.735 283 178 8 181 437 229 502 9.25e-12 67.0
Msa0818070 MtrunA17_Chr5g0431641 23.305 236 161 6 219 438 235 466 1.82e-11 66.2
Msa0818070 MtrunA17_Chr1g0204271 25.424 236 160 8 231 454 261 492 1.89e-11 66.2
Msa0818070 MtrunA17_Chr3g0101571 21.154 468 328 13 1 438 9 465 1.93e-11 66.2
Msa0818070 MtrunA17_Chr5g0446131 23.228 254 155 7 210 441 261 496 1.95e-11 66.2
Msa0818070 MtrunA17_Chr1g0184421 22.980 396 253 15 66 421 73 456 2.74e-11 65.5
Msa0818070 MtrunA17_Chr5g0419691 26.108 203 135 5 240 438 271 462 3.34e-11 65.5
Msa0818070 MtrunA17_Chr2g0310351 20.588 170 129 3 271 438 1 166 3.94e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0818070 AT5G05690.1 80.182 439 85 2 28 465 31 468 0.0 738
Msa0818070 AT5G05690.2 79.891 368 72 2 28 394 31 397 0.0 613
Msa0818070 AT5G05690.3 79.429 350 70 2 117 465 1 349 0.0 575
Msa0818070 AT3G50660.1 40.787 483 248 7 19 464 30 511 5.87e-124 371
Msa0818070 AT4G36380.1 40.950 442 253 4 28 462 69 509 2.92e-120 362
Msa0818070 AT3G13730.1 38.479 447 260 5 27 464 50 490 1.68e-116 351
Msa0818070 AT1G73340.1 37.155 471 279 5 3 465 19 480 2.70e-111 338
Msa0818070 AT3G13730.2 38.186 419 245 4 27 436 50 463 3.80e-108 329
Msa0818070 AT3G50660.2 41.089 404 209 6 19 394 30 432 7.12e-104 317
Msa0818070 AT3G30180.1 36.481 466 277 8 1 458 4 458 8.95e-98 302
Msa0818070 AT5G38970.1 35.886 457 275 9 1 450 5 450 7.24e-94 292
Msa0818070 AT1G12740.1 33.630 449 294 3 20 465 23 470 1.14e-92 289
Msa0818070 AT4G19230.1 33.333 453 285 8 18 467 26 464 7.63e-91 284
Msa0818070 AT1G12740.2 33.407 455 293 4 20 465 23 476 1.60e-90 284
Msa0818070 AT1G12740.4 33.187 455 294 4 20 465 23 476 3.65e-90 283
Msa0818070 AT5G45340.1 33.630 449 283 7 19 465 27 462 3.17e-89 280
Msa0818070 AT5G14400.2 35.613 424 244 8 33 450 1 401 6.94e-87 273
Msa0818070 AT3G19270.2 32.914 477 295 8 1 464 1 465 2.95e-86 273
Msa0818070 AT5G14400.3 36.341 410 232 8 33 436 1 387 9.61e-86 269
Msa0818070 AT5G45340.2 33.643 431 272 6 19 448 27 444 1.95e-85 270
Msa0818070 AT3G19270.1 33.556 450 275 7 1 438 1 438 3.99e-85 269
Msa0818070 AT4G19230.2 33.492 421 264 7 18 436 26 432 1.65e-84 268
Msa0818070 AT5G38970.2 36.364 374 227 6 82 450 2 369 1.44e-79 253
Msa0818070 AT5G38970.4 36.364 374 227 6 82 450 2 369 1.44e-79 253
Msa0818070 AT1G55940.2 32.373 451 273 10 27 456 44 483 2.17e-78 253
Msa0818070 AT2G29090.2 32.812 448 279 9 24 462 45 479 2.02e-77 250
Msa0818070 AT2G29090.1 32.812 448 279 9 24 462 45 479 2.02e-77 250
Msa0818070 AT5G48000.2 33.705 448 281 8 27 464 34 475 3.43e-77 249
Msa0818070 AT5G48000.4 33.705 448 281 8 27 464 34 475 3.43e-77 249
Msa0818070 AT5G48000.7 33.705 448 281 8 27 464 34 475 3.43e-77 249
Msa0818070 AT5G48000.6 33.705 448 281 8 27 464 34 475 3.43e-77 249
Msa0818070 AT5G48000.5 33.705 448 281 8 27 464 34 475 3.43e-77 249
Msa0818070 AT5G48000.3 33.705 448 281 8 27 464 34 475 3.43e-77 249
Msa0818070 AT5G38970.3 34.336 399 246 8 1 392 5 394 4.02e-77 247
Msa0818070 AT5G48000.1 33.705 448 281 8 27 464 75 516 1.26e-76 249
Msa0818070 AT1G55940.1 32.639 432 259 10 27 437 44 464 1.54e-76 247
Msa0818070 AT4G36380.2 37.870 338 203 3 28 358 69 406 2.01e-75 243
Msa0818070 AT5G36110.1 30.973 452 293 10 21 460 27 471 2.32e-73 239
Msa0818070 AT2G32440.2 32.388 423 271 7 24 436 40 457 3.27e-73 239
Msa0818070 AT2G32440.1 32.388 423 271 7 24 436 40 457 3.27e-73 239
Msa0818070 AT1G19630.1 33.700 454 274 11 28 466 35 476 4.68e-72 236
Msa0818070 AT1G05160.2 31.973 441 284 8 25 453 42 478 1.53e-71 235
Msa0818070 AT1G05160.1 31.973 441 284 8 25 453 42 478 1.53e-71 235
Msa0818070 AT3G44970.1 31.828 465 296 7 5 452 3 463 7.06e-71 233
Msa0818070 AT5G14400.1 35.230 369 210 8 88 450 2 347 3.18e-69 225
Msa0818070 AT2G42850.1 33.333 453 274 12 12 447 23 464 1.69e-68 227
Msa0818070 AT1G78490.1 30.805 435 283 7 27 450 34 461 3.15e-68 226
Msa0818070 AT4G15300.2 30.269 446 296 8 1 439 7 444 2.62e-67 223
Msa0818070 AT4G15300.3 31.066 441 288 8 5 439 4 434 3.04e-67 223
Msa0818070 AT5G14400.4 35.843 332 205 6 33 358 1 330 6.89e-67 218
Msa0818070 AT1G19630.3 33.412 422 260 9 28 438 35 446 7.70e-67 221
Msa0818070 AT1G12740.3 33.333 342 225 2 20 358 23 364 1.11e-65 216
Msa0818070 AT1G65670.1 29.091 440 292 7 1 432 7 434 1.62e-64 216
Msa0818070 AT4G15396.1 29.476 458 298 10 2 447 9 453 5.85e-62 209
Msa0818070 AT4G15393.2 28.540 459 299 8 2 447 9 451 1.02e-61 208
Msa0818070 AT4G15396.3 29.505 444 287 10 2 432 9 439 1.52e-60 205
Msa0818070 AT4G15300.1 30.621 467 278 13 5 439 4 456 5.57e-60 204
Msa0818070 AT2G29090.3 30.435 391 254 8 81 462 3 384 1.58e-56 192
Msa0818070 AT1G78490.2 30.688 378 245 6 27 393 34 405 2.14e-56 193
Msa0818070 AT4G15310.1 26.383 470 317 11 3 461 10 461 1.03e-55 192
Msa0818070 AT1G19630.2 32.891 377 236 8 28 393 35 405 3.55e-55 190
Msa0818070 AT4G15396.2 27.511 458 286 10 2 447 9 432 2.01e-50 178
Msa0818070 AT3G30290.1 30.548 383 250 10 68 443 5 378 1.03e-49 175
Msa0818070 AT4G15396.4 28.960 404 263 9 2 393 9 400 1.50e-49 174
Msa0818070 AT5G36110.2 29.226 349 235 7 28 367 34 379 4.01e-49 173
Msa0818070 AT4G15393.1 27.654 405 265 7 2 393 9 398 7.39e-49 172
Msa0818070 AT2G42850.2 32.533 375 225 12 12 367 23 388 4.98e-45 162
Msa0818070 AT4G15393.3 24.938 405 243 6 2 393 9 365 9.94e-40 147
Msa0818070 AT5G36140.1 29.758 289 193 7 13 294 18 303 8.47e-39 143
Msa0818070 AT2G29090.4 30.877 285 180 7 24 300 45 320 2.06e-38 143
Msa0818070 AT3G44970.2 29.618 314 210 5 27 332 34 344 2.22e-33 130
Msa0818070 AT1G31800.1 26.020 392 240 10 64 417 139 518 7.07e-27 114
Msa0818070 AT4G37410.1 26.939 245 167 4 207 446 229 466 4.40e-26 111
Msa0818070 AT4G37370.1 29.630 243 160 5 205 444 228 462 1.31e-24 107
Msa0818070 AT5G36130.1 37.681 138 79 3 326 460 1 134 1.74e-24 99.4
Msa0818070 AT4G37400.1 25.095 263 181 6 207 460 227 482 2.89e-24 105
Msa0818070 AT3G28740.1 28.980 245 161 6 206 446 238 473 1.40e-23 103
Msa0818070 AT4G37330.1 26.205 477 292 17 4 444 8 460 1.80e-23 103
Msa0818070 AT4G37430.1 22.110 493 310 15 4 446 1 469 2.21e-22 100
Msa0818070 AT5G36220.2 26.667 240 159 6 205 438 89 317 7.34e-21 94.4
Msa0818070 AT4G37340.1 25.105 474 304 19 6 446 10 465 7.95e-21 95.5
Msa0818070 AT5G67310.1 28.333 240 159 4 204 438 237 468 9.66e-21 95.5
Msa0818070 AT5G36220.1 26.667 240 159 6 205 438 235 463 2.46e-20 94.0
Msa0818070 AT4G37310.1 25.095 263 185 5 214 465 237 498 2.53e-20 94.0
Msa0818070 AT5G06905.1 24.701 502 311 17 2 451 6 492 3.39e-20 94.0
Msa0818070 AT4G37360.1 24.948 481 306 19 1 446 5 465 5.50e-20 93.2
Msa0818070 AT1G66540.2 26.721 247 165 6 207 446 56 293 1.83e-19 89.7
Msa0818070 AT2G45550.1 22.524 515 334 18 2 465 8 508 2.89e-19 90.9
Msa0818070 AT1G66540.1 26.721 247 165 6 207 446 115 352 3.31e-19 89.7
Msa0818070 AT4G37320.1 27.230 213 145 4 228 438 253 457 4.31e-19 90.1
Msa0818070 AT5G57220.1 26.582 237 158 7 207 438 227 452 4.36e-19 90.1
Msa0818070 AT2G27000.1 23.741 417 268 11 62 438 69 475 8.18e-19 89.4
Msa0818070 AT3G25180.1 26.852 216 150 4 234 446 273 483 9.14e-19 89.4
Msa0818070 AT3G26300.1 22.561 492 306 17 1 442 1 467 1.28e-18 89.0
Msa0818070 AT3G20950.1 24.375 320 212 7 145 438 166 481 9.12e-18 86.3
Msa0818070 AT2G23220.1 26.908 249 163 7 215 452 255 495 1.17e-17 85.9
Msa0818070 AT3G53130.1 28.571 203 132 4 238 432 311 508 1.57e-17 85.5
Msa0818070 AT2G27010.1 22.727 418 253 15 62 438 65 453 2.20e-17 85.1
Msa0818070 AT5G47990.1 25.231 325 203 10 145 438 162 477 3.80e-17 84.3
Msa0818070 AT5G04330.1 24.091 220 152 3 232 439 255 471 5.03e-17 84.0
Msa0818070 AT2G45570.1 27.368 190 130 4 253 438 289 474 5.91e-17 84.0
Msa0818070 AT4G15350.1 23.810 420 276 12 62 444 65 477 6.01e-17 83.6
Msa0818070 AT3G26230.1 30.000 180 112 6 273 445 300 472 9.10e-17 83.2
Msa0818070 AT4G15360.1 21.414 481 321 15 5 446 19 481 1.11e-16 82.8
Msa0818070 AT3G20940.1 24.922 321 210 9 145 438 162 478 1.30e-16 82.8
Msa0818070 AT5G25180.1 22.764 492 297 19 4 442 2 463 1.40e-16 82.4
Msa0818070 AT3G20960.1 27.317 205 134 4 246 439 174 374 1.56e-16 82.0
Msa0818070 AT2G40890.1 25.728 206 145 4 244 445 267 468 1.85e-16 82.0
Msa0818070 AT2G23190.1 23.746 299 200 8 166 444 217 507 2.14e-16 82.0
Msa0818070 AT4G15380.1 27.391 230 151 4 226 443 253 478 2.31e-16 82.0
Msa0818070 AT3G32047.1 26.238 202 135 4 247 438 277 474 2.38e-16 82.0
Msa0818070 AT3G26310.1 24.885 217 144 5 228 442 267 466 2.47e-16 81.6
Msa0818070 AT5G52400.1 21.729 428 298 15 63 463 100 517 2.54e-16 81.6
Msa0818070 AT1G74540.1 22.897 214 156 4 252 460 270 479 2.85e-16 81.6
Msa0818070 AT3G20960.2 27.317 205 134 4 246 439 277 477 3.22e-16 81.6
Msa0818070 AT5G35715.1 28.351 194 125 5 250 439 220 403 3.74e-16 80.9
Msa0818070 AT5G42580.1 21.374 262 183 4 189 438 212 462 4.00e-16 81.3
Msa0818070 AT3G20120.2 26.341 205 135 4 247 439 141 341 4.54e-16 80.1
Msa0818070 AT3G20120.3 26.341 205 135 4 247 439 141 341 4.54e-16 80.1
Msa0818070 AT3G20120.1 26.341 205 135 4 247 439 141 341 4.54e-16 80.1
Msa0818070 AT1G11600.1 24.444 495 298 19 8 443 6 483 5.74e-16 80.9
Msa0818070 AT5G25140.1 26.540 211 141 6 242 442 257 463 6.42e-16 80.5
Msa0818070 AT2G45560.1 27.500 200 136 4 244 438 278 473 6.72e-16 80.5
Msa0818070 AT2G34490.1 21.212 495 341 18 6 466 14 493 8.39e-16 80.1
Msa0818070 AT3G20120.4 26.829 205 134 4 247 439 277 477 9.14e-16 80.1
Msa0818070 AT2G24180.1 23.755 261 181 6 210 460 239 491 9.36e-16 80.1
Msa0818070 AT3G20140.1 19.697 462 318 10 14 438 28 473 1.30e-15 79.7
Msa0818070 AT1G74550.1 22.751 189 140 3 253 439 265 449 1.55e-15 79.3
Msa0818070 AT5G25120.1 25.843 178 126 3 267 442 290 463 1.70e-15 79.3
Msa0818070 AT5G25130.1 26.570 207 138 5 242 446 273 467 1.76e-15 79.0
Msa0818070 AT3G53300.1 28.125 192 128 4 250 439 282 465 1.97e-15 79.0
Msa0818070 AT3G26270.1 25.463 216 142 6 243 445 266 475 2.31e-15 79.0
Msa0818070 AT4G15110.1 25.490 204 117 4 256 429 341 539 3.58e-15 78.6
Msa0818070 AT5G07990.1 25.701 214 139 5 243 441 263 471 3.66e-15 78.2
Msa0818070 AT3G48520.1 27.068 266 167 9 215 465 246 499 3.79e-15 78.2
Msa0818070 AT1G33730.1 26.263 198 136 5 247 438 144 337 4.10e-15 77.0
Msa0818070 AT1G33730.2 26.263 198 136 5 247 438 144 337 4.10e-15 77.0
Msa0818070 AT3G20100.1 24.878 205 138 3 246 438 277 477 4.82e-15 77.8
Msa0818070 AT3G20935.1 27.011 174 117 2 271 438 134 303 4.83e-15 76.6
Msa0818070 AT1G50520.1 23.077 299 200 6 165 438 187 480 5.67e-15 77.8
Msa0818070 AT2G42250.1 25.688 218 143 4 244 446 274 487 6.37e-15 77.4
Msa0818070 AT2G45580.2 25.692 253 162 6 192 438 88 320 6.37e-15 76.6
Msa0818070 AT5G10600.1 26.633 199 134 5 257 451 298 488 8.66e-15 77.0
Msa0818070 AT3G10570.1 26.953 256 167 7 199 439 231 481 1.14e-14 76.6
Msa0818070 AT2G45580.1 25.692 253 162 6 192 438 242 474 1.61e-14 76.3
Msa0818070 AT1G33720.4 25.234 214 150 5 231 438 132 341 1.62e-14 75.5
Msa0818070 AT1G33720.3 25.234 214 150 5 231 438 132 341 1.62e-14 75.5
Msa0818070 AT1G33720.5 25.234 214 150 5 231 438 132 341 1.62e-14 75.5
Msa0818070 AT1G24540.1 24.436 266 179 9 194 437 225 490 1.73e-14 76.3
Msa0818070 AT4G15330.1 22.785 237 169 4 212 438 239 471 1.85e-14 75.9
Msa0818070 AT3G20090.1 26.540 211 139 6 247 446 142 347 1.89e-14 75.5
Msa0818070 AT5G10610.1 24.873 197 140 4 257 451 282 472 1.90e-14 75.9
Msa0818070 AT4G15330.2 22.785 237 169 4 212 438 211 443 2.00e-14 75.9
Msa0818070 AT2G14100.1 23.762 303 205 6 158 438 178 476 2.44e-14 75.5
Msa0818070 AT1G33720.1 25.234 214 150 5 231 438 264 473 3.25e-14 75.1
Msa0818070 AT4G12330.1 25.854 205 143 4 247 446 287 487 3.64e-14 75.1
Msa0818070 AT1G11610.2 27.053 207 139 5 242 439 260 463 3.81e-14 75.1
Msa0818070 AT3G26830.1 23.364 214 157 4 236 445 260 470 4.47e-14 74.7
Msa0818070 AT3G61040.1 26.667 210 141 5 237 438 258 462 4.69e-14 74.7
Msa0818070 AT1G11610.1 27.053 207 139 5 242 439 260 463 5.39e-14 74.3
Msa0818070 AT3G20090.2 25.461 271 180 8 193 446 220 485 5.39e-14 74.7
Msa0818070 AT3G48300.1 24.229 454 279 18 30 444 31 458 5.48e-14 74.3
Msa0818070 AT3G48300.2 24.229 454 279 18 30 444 33 460 5.51e-14 74.3
Msa0818070 AT3G14620.1 28.315 279 170 12 165 431 223 483 6.04e-14 74.3
Msa0818070 AT2G30770.1 26.601 203 137 5 245 438 263 462 9.11e-14 73.9
Msa0818070 AT4G36220.1 24.581 179 129 2 262 438 307 481 9.60e-14 73.9
Msa0818070 AT2G28860.1 20.985 467 335 12 24 466 33 489 9.68e-14 73.6
Msa0818070 AT4G22690.1 23.697 211 148 5 243 445 319 524 1.01e-13 73.9
Msa0818070 AT4G22710.1 23.697 211 148 5 243 445 288 493 1.06e-13 73.6
Msa0818070 AT1G28430.1 25.000 264 180 7 196 446 224 482 1.41e-13 73.2
Msa0818070 AT4G12300.1 24.757 206 141 5 247 442 280 481 2.43e-13 72.4
Msa0818070 AT2G46960.2 22.779 439 281 16 55 450 83 506 3.74e-13 72.0
Msa0818070 AT1G33720.2 25.882 170 120 3 271 438 201 366 4.33e-13 71.2
Msa0818070 AT5G38450.1 22.430 428 285 13 63 462 92 500 4.54e-13 71.6
Msa0818070 AT3G20080.2 25.000 248 169 4 209 443 240 483 4.71e-13 71.6
Msa0818070 AT3G20080.1 25.000 248 169 4 209 443 240 483 4.71e-13 71.6
Msa0818070 AT3G20080.4 25.000 248 169 4 209 443 103 346 5.69e-13 70.9
Msa0818070 AT3G20080.5 25.000 248 169 4 209 443 103 346 5.69e-13 70.9
Msa0818070 AT3G20080.6 25.000 248 169 4 209 443 103 346 5.69e-13 70.9
Msa0818070 AT3G20080.3 25.000 248 169 4 209 443 103 346 5.69e-13 70.9
Msa0818070 AT1G11680.1 25.172 290 181 9 144 421 174 439 5.79e-13 71.2
Msa0818070 AT5G24900.2 24.545 220 148 6 232 439 169 382 6.72e-13 70.9
Msa0818070 AT3G26200.1 23.737 198 141 4 244 439 276 465 8.26e-13 70.9
Msa0818070 AT5G44620.1 25.888 197 130 6 246 430 284 476 9.73e-13 70.5
Msa0818070 AT5G04660.1 23.922 255 175 7 199 438 229 479 1.09e-12 70.5
Msa0818070 AT5G24900.1 24.545 220 148 6 232 439 286 499 1.16e-12 70.5
Msa0818070 AT3G26220.1 26.966 178 124 4 271 445 301 475 1.36e-12 70.1
Msa0818070 AT5G24950.1 25.000 204 142 5 267 462 291 491 1.74e-12 69.7
Msa0818070 AT3G14680.1 25.203 246 162 7 199 431 244 480 1.84e-12 69.7
Msa0818070 AT2G46950.1 22.807 456 278 16 55 463 140 568 2.31e-12 69.7
Msa0818070 AT1G67110.1 26.446 242 163 5 210 442 250 485 2.70e-12 69.3
Msa0818070 AT3G14640.1 22.619 420 272 15 53 437 83 484 3.82e-12 68.9
Msa0818070 AT3G14640.2 22.619 420 272 15 53 437 105 506 4.30e-12 68.6
Msa0818070 AT3G20130.1 23.902 205 140 4 246 438 277 477 5.21e-12 68.2
Msa0818070 AT3G20130.2 23.902 205 140 4 246 438 249 449 5.62e-12 68.2
Msa0818070 AT1G13080.2 23.563 174 128 3 268 439 180 350 7.83e-12 67.4
Msa0818070 AT2G30750.1 26.404 178 124 5 265 438 288 462 8.69e-12 67.8
Msa0818070 AT5G24960.1 27.451 204 137 5 267 462 292 492 9.17e-12 67.4
Msa0818070 AT1G64930.1 22.078 462 301 15 28 442 32 481 1.31e-11 67.0
Msa0818070 AT1G13080.1 23.563 174 128 3 268 439 298 468 1.54e-11 67.0
Msa0818070 AT4G27710.1 26.459 257 170 8 199 445 248 495 1.83e-11 66.6
Msa0818070 AT2G27690.1 23.827 277 191 9 206 465 221 494 2.00e-11 66.6
Msa0818070 AT3G14690.1 22.087 412 272 14 55 431 83 480 2.40e-11 66.2
Msa0818070 AT3G14690.2 22.087 412 272 14 55 431 118 515 2.46e-11 66.2
Msa0818070 AT5G63450.1 25.188 266 173 10 215 465 248 502 3.12e-11 65.9
Msa0818070 AT5G63450.2 25.188 266 173 10 215 465 306 560 3.86e-11 65.9
Msa0818070 AT1G34540.1 23.478 230 161 7 215 433 242 467 4.26e-11 65.5

Find 146 sgRNAs with CRISPR-Local

Find 613 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATAAACCGGTTCGTTTC+CGG 0.127646 5_3:-53528055 None:intergenic
CTTTAATTAATTACATAATT+TGG 0.129773 5_3:-53538230 None:intergenic
CGCTGGTCTATGAATGGTTC+TGG 0.181335 5_3:-53527965 None:intergenic
TTCGGCTTAATTTGGATTCT+TGG 0.186299 5_3:+53528257 Msa0818070:CDS
TGCTAACTCCTCAATTATTA+AGG 0.201541 5_3:+53528204 Msa0818070:CDS
ACATAATTAGTGGGATATTT+AGG 0.221464 5_3:+53537264 Msa0818070:CDS
TCGGCTCATTCGGCTTAATT+TGG 0.236283 5_3:+53528249 Msa0818070:CDS
AAATAAACCGGTTCGTTTCC+GGG 0.257757 5_3:-53528054 None:intergenic
TTTCGAGGAAAGGCGATTAA+TGG 0.278388 5_3:-53527630 None:intergenic
AATCAAGTAGCTAACCTTCT+TGG 0.287674 5_3:-53528308 None:intergenic
CGGTTCAATATCGAACCTTT+TGG 0.290460 5_3:+53528114 Msa0818070:CDS
ACCGCATTGTAACTTGTTAC+AGG 0.290889 5_3:+53538015 Msa0818070:CDS
ATCTTATAACCATATATAAA+AGG 0.291980 5_3:-53538346 None:intergenic
AACTGTATTATTACTTATAC+TGG 0.310509 5_3:-53538255 None:intergenic
AGGTTGTGAATGAGACTTTA+AGG 0.331849 5_3:+53537234 Msa0818070:intron
AACGGTGTATATACATTTGC+AGG 0.339213 5_3:-53537927 None:intergenic
AACTCTGGCAAGCTCATAAC+CGG 0.339515 5_3:-53537973 None:intergenic
CTTGATCGCGAATGTCATTA+TGG 0.339538 5_3:-53533932 None:intergenic
CGCGCATCTTTGAAATGATC+GGG 0.340183 5_3:-53537456 None:intergenic
AGAAGAAAAGAATGTGTAAT+GGG 0.357692 5_3:+53533793 Msa0818070:CDS
GTATTGAGAGAGAATCTAAA+AGG 0.367807 5_3:-53527578 None:intergenic
GCAAAGACTTTCCACCCCTT+TGG 0.369297 5_3:-53537408 None:intergenic
TCCTGCAGAAGAAGATAAAT+TGG 0.369896 5_3:+53538144 Msa0818070:CDS
CTCTTCTGCGTCCTAGTTGT+TGG 0.375052 5_3:-53538175 None:intergenic
TATGAATGGTTCTGGGTTGT+CGG 0.390534 5_3:-53527957 None:intergenic
CTTCATTCATTAAAATAAAC+CGG 0.394225 5_3:-53528066 None:intergenic
GTGAATGGACTGAGACTCTA+AGG 0.398797 5_3:+53533473 Msa0818070:CDS
CAAAAGGTTCGATATTGAAC+CGG 0.408245 5_3:-53528113 None:intergenic
TTGATATTGATCGGCTCATT+CGG 0.411446 5_3:+53528239 Msa0818070:CDS
TCCACTCCAATGGTACGTTT+TGG 0.422789 5_3:-53537061 None:intergenic
CAGCTGACCCGGAAACGAAC+CGG 0.429948 5_3:+53528047 Msa0818070:CDS
ATCTTCTTCTTGATATTGAT+CGG 0.431949 5_3:+53528230 Msa0818070:CDS
TCTTCTGCGTCCTAGTTGTT+GGG 0.434896 5_3:-53538174 None:intergenic
GAGTACGTTCTCGTGATTGA+AGG 0.438549 5_3:+53533499 Msa0818070:CDS
ACTCTACGCTTCACTATGAT+AGG 0.440368 5_3:-53538202 None:intergenic
ACATGAAATCGACTATTTGT+TGG 0.440689 5_3:-53533873 None:intergenic
GAGAGAGAGAGTAGAGAGAG+AGG 0.442174 5_3:-53527669 None:intergenic
CTAGGTGCATTGTTGGCCTC+TGG 0.444932 5_3:+53533835 Msa0818070:CDS
AGATGTCTTGTTAAATCACT+TGG 0.445989 5_3:+53538375 Msa0818070:three_prime_UTR
ACCAATTTATCTTCTTCTGC+AGG 0.448146 5_3:-53538145 None:intergenic
GTAGAGAGGTGATGGTTTCG+AGG 0.449505 5_3:-53527645 None:intergenic
CACTCTTTGCTTCTTATGAA+AGG 0.450995 5_3:+53528142 Msa0818070:CDS
AGAGAGGAGTAGAGAGGTGA+TGG 0.452300 5_3:-53527653 None:intergenic
AGAGAATCTAAAAGGGAAGA+AGG 0.454053 5_3:-53527570 None:intergenic
CACCGTTTGGTGGAGGGCCG+CGG 0.454401 5_3:+53537943 Msa0818070:CDS
GGAGGGCCGCGGCTGTGTCC+CGG 0.459936 5_3:+53537954 Msa0818070:CDS
TGACATGCTAGGTGCATTGT+TGG 0.469042 5_3:+53533828 Msa0818070:CDS
GGGAGAAGTGAGGGAGAACA+CGG 0.472165 5_3:-53527604 None:intergenic
GAGAAGTGAGGGAGAACACG+GGG 0.473267 5_3:-53527602 None:intergenic
GTACTAGAGAGGAGTGGTAA+GGG 0.473273 5_3:-53533535 None:intergenic
TACCTACCGCAGAGCAATCA+AGG 0.476180 5_3:+53533555 Msa0818070:CDS
TGCATAGTTTCCCCTACAAA+GGG 0.476502 5_3:-53527914 None:intergenic
GCAAATGTATATACACCGTT+TGG 0.478862 5_3:+53537930 Msa0818070:CDS
ATAGGCTACACTATTCCAAA+GGG 0.481353 5_3:+53537393 Msa0818070:intron
TTCACTCGCTGGTCTATGAA+TGG 0.486246 5_3:-53527971 None:intergenic
GGTACTAGAGAGGAGTGGTA+AGG 0.491694 5_3:-53533536 None:intergenic
AGGATGGCAAACATAATTAG+TGG 0.497133 5_3:+53537254 Msa0818070:CDS
ATTTGGATTCTTGGTCCGAC+CGG 0.498264 5_3:+53528266 Msa0818070:CDS
GGTAGAAGTGGTTTCATAGC+CGG 0.498721 5_3:-53533911 None:intergenic
CTATTTGTTGGTCGGAAAAG+TGG 0.502333 5_3:-53533861 None:intergenic
GTCTCGGACTACCCTTTGTA+GGG 0.503320 5_3:+53527903 Msa0818070:CDS
GCTGGTCTATGAATGGTTCT+GGG 0.506052 5_3:-53527964 None:intergenic
TCATAGACCAGCGAGTGAAC+CGG 0.507847 5_3:+53527975 Msa0818070:CDS
AACCGTACCGGTTCACTCGC+TGG 0.511098 5_3:-53527982 None:intergenic
ACTCATGGAGGAAGCCAAGA+AGG 0.511697 5_3:+53528294 Msa0818070:CDS
GAGGTGATGGTTTCGAGGAA+AGG 0.514399 5_3:-53527640 None:intergenic
TGCCAATGCTAGAGGATGTT+CGG 0.518122 5_3:-53533962 None:intergenic
ACTATATGTGAATGTTATGT+TGG 0.520358 5_3:-53527732 None:intergenic
TTTGGATTCTTGGTCCGACC+GGG 0.522161 5_3:+53528267 Msa0818070:CDS
ATGTTGGCATTGCTCGTCGC+CGG 0.522743 5_3:+53533892 Msa0818070:CDS
CGGCGATACAAACTCCCGCC+GGG 0.524998 5_3:+53527878 Msa0818070:CDS
CGAGGAAAGGCGATTAATGG+AGG 0.525077 5_3:-53527627 None:intergenic
TATTGAGAGAGAATCTAAAA+GGG 0.527161 5_3:-53527577 None:intergenic
GTAGAGAGAGAGGAGTAGAG+AGG 0.529847 5_3:-53527659 None:intergenic
TTGCATAGTTTCCCCTACAA+AGG 0.530659 5_3:-53527915 None:intergenic
GCGCGCATCTTTGAAATGAT+CGG 0.533046 5_3:-53537457 None:intergenic
GGAGAAGTGAGGGAGAACAC+GGG 0.533757 5_3:-53527603 None:intergenic
AAGAAGAAAAGAATGTGTAA+TGG 0.533998 5_3:+53533792 Msa0818070:CDS
TAGAGAGGAGTGGTAAGGGA+AGG 0.534955 5_3:-53533531 None:intergenic
AAGATGATCCTTAATAATTG+AGG 0.535480 5_3:-53528212 None:intergenic
GTATATACACCGTTTGGTGG+AGG 0.536902 5_3:+53537936 Msa0818070:CDS
CACCGAACATCCTCTAGCAT+TGG 0.537416 5_3:+53533960 Msa0818070:CDS
AGAGAGGAGTGGTAAGGGAA+GGG 0.538828 5_3:-53533530 None:intergenic
AAAAGGTTCGATATTGAACC+GGG 0.542193 5_3:-53528112 None:intergenic
TCTAGCATTGGCACAACTCA+AGG 0.544534 5_3:+53533972 Msa0818070:CDS
GGCAAGAACGAAGGTGGCAG+AGG 0.545254 5_3:+53533747 Msa0818070:intron
AGGAATTAACATTGATTGTG+AGG 0.547015 5_3:+53533767 Msa0818070:CDS
ATCGCCGCCGGTGAGTTCTC+CGG 0.550311 5_3:-53527862 None:intergenic
AGCCGCGGCCCTCCACCAAA+CGG 0.552172 5_3:-53537945 None:intergenic
ATGCGCGCAGCTTCAATCCA+TGG 0.552603 5_3:+53537472 Msa0818070:CDS
GCAGCTTCAATCCATGGAGA+TGG 0.553582 5_3:+53537478 Msa0818070:CDS
AAGGGTAGTCCGAGACTCCC+CGG 0.554799 5_3:-53527896 None:intergenic
AATGTATATACACCGTTTGG+TGG 0.556174 5_3:+53537933 Msa0818070:CDS
TTGTAATCTGTCCACTCCAA+TGG 0.563694 5_3:-53537071 None:intergenic
GAGGAAAGGCGATTAATGGA+GGG 0.564058 5_3:-53527626 None:intergenic
AAATACCGAGAGCACAACTC+TGG 0.566559 5_3:-53537988 None:intergenic
AGAAGTGAGGGAGAACACGG+GGG 0.566906 5_3:-53527601 None:intergenic
GAAATCGACTATTTGTTGGT+CGG 0.574420 5_3:-53533869 None:intergenic
AAGTTACAACAACTTTCTCA+TGG 0.575672 5_3:+53527790 Msa0818070:exon
TGAGCTACCTGCCATCTCCA+TGG 0.575758 5_3:-53537489 None:intergenic
GCTTGCCAGAGTTGTGCTCT+CGG 0.575837 5_3:+53537983 Msa0818070:CDS
TAGTGAAGATTGAACCGTAC+CGG 0.579242 5_3:-53527994 None:intergenic
GCGGGAGTTTGTATCGCCGC+CGG 0.580115 5_3:-53527874 None:intergenic
GGATGGCAAACATAATTAGT+GGG 0.583261 5_3:+53537255 Msa0818070:CDS
GCGGCGATACAAACTCCCGC+CGG 0.583927 5_3:+53527877 Msa0818070:CDS
ACAAATAGTCGATTTCATGT+TGG 0.584970 5_3:+53533876 Msa0818070:CDS
CTTCAATCCATGGAGATGGC+AGG 0.586206 5_3:+53537482 Msa0818070:CDS
TATAGGCTACACTATTCCAA+AGG 0.586820 5_3:+53537392 Msa0818070:intron
AGAGTCTCAGTCCATTCACC+TGG 0.587048 5_3:-53533469 None:intergenic
AAGTTGCCAAAACGTACCAT+TGG 0.587830 5_3:+53537055 Msa0818070:CDS
ATGACAGACATCAATATCAA+AGG 0.587980 5_3:+53537293 Msa0818070:CDS
AGGAAAGGCGATTAATGGAG+GGG 0.595161 5_3:-53527625 None:intergenic
GAATGTCATTATGGTAGAAG+TGG 0.595235 5_3:-53533923 None:intergenic
GAAGAAAAGAATGTGTAATG+GGG 0.596502 5_3:+53533794 Msa0818070:CDS
GACCAGCGAGTGAACCGGTA+CGG 0.596905 5_3:+53527980 Msa0818070:CDS
TATATACACCGTTTGGTGGA+GGG 0.599649 5_3:+53537937 Msa0818070:CDS
TCATTCACCGGAGAACTCAC+CGG 0.600290 5_3:+53527855 Msa0818070:CDS
TGTGAATGAGACTTTAAGGA+TGG 0.600464 5_3:+53537238 Msa0818070:CDS
AAGAAAAGAATGTGTAATGG+GGG 0.604993 5_3:+53533795 Msa0818070:CDS
GAAGTGAGGGAGAACACGGG+GGG 0.607188 5_3:-53527600 None:intergenic
TACCTTGATTGCTCTGCGGT+AGG 0.615252 5_3:-53533557 None:intergenic
ACGGTGTATATACATTTGCA+GGG 0.623251 5_3:-53537926 None:intergenic
CTTCCTCCATGAGTAAAACC+CGG 0.625330 5_3:-53528285 None:intergenic
CAACAACTAGGACGCAGAAG+AGG 0.626945 5_3:+53538176 Msa0818070:CDS
GGAAAGGCGATTAATGGAGG+GGG 0.629290 5_3:-53527624 None:intergenic
CTCCATGAGTAAAACCCGGT+CGG 0.630502 5_3:-53528281 None:intergenic
TATCATAGTGAAGCGTAGAG+TGG 0.633817 5_3:+53538204 Msa0818070:CDS
GTCGGAAAAGTGGTCTCCAG+AGG 0.637279 5_3:-53533851 None:intergenic
TCATAACCGGGACACAGCCG+CGG 0.638373 5_3:-53537960 None:intergenic
TATGTAGGCAAGAACGAAGG+TGG 0.640410 5_3:+53533741 Msa0818070:intron
GCCAAAACGTACCATTGGAG+TGG 0.646564 5_3:+53537060 Msa0818070:CDS
GCGCATCTTTGAAATGATCG+GGG 0.648246 5_3:-53537455 None:intergenic
GCTACACTATTCCAAAGGGG+TGG 0.652523 5_3:+53537397 Msa0818070:CDS
TTGAGTTGTGCCAATGCTAG+AGG 0.665409 5_3:-53533970 None:intergenic
AGTCTTTGCATCATTTCGTG+CGG 0.672861 5_3:+53537422 Msa0818070:CDS
ACTCTGGCAAGCTCATAACC+GGG 0.683931 5_3:-53537972 None:intergenic
CTCTGCGGTAGGTACTAGAG+AGG 0.687978 5_3:-53533546 None:intergenic
CGGTAGGTACTAGAGAGGAG+TGG 0.700365 5_3:-53533541 None:intergenic
TCTCGGACTACCCTTTGTAG+GGG 0.707348 5_3:+53527904 Msa0818070:CDS
TTCACCGGAGAACTCACCGG+CGG 0.711222 5_3:+53527858 Msa0818070:CDS
AATTATGTAGGCAAGAACGA+AGG 0.720873 5_3:+53533738 Msa0818070:intron
GTGTTACCTTGATTGCTCTG+CGG 0.728927 5_3:-53533561 None:intergenic
ACCTGTAACAAGTTACAATG+CGG 0.742017 5_3:-53538016 None:intergenic
TAGGCTACACTATTCCAAAG+GGG 0.751240 5_3:+53537394 Msa0818070:intron
AAAGGTTCGATATTGAACCG+GGG 0.761422 5_3:-53528111 None:intergenic
GGTAGTCCGAGACTCCCCGG+CGG 0.774763 5_3:-53527893 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTTTTATTATAATT+TGG + chr5_3:53528353-53528372 Msa0818070:intron 0.0%
!!! TTATTATAATAATTTTTTTA+AGG + chr5_3:53530971-53530990 Msa0818070:intron 0.0%
!!! AAAGATTTTTTTTTTTTGTT+TGG + chr5_3:53528572-53528591 Msa0818070:intron 10.0%
!!! AAGATTTTTTTTTTTTGTTT+GGG + chr5_3:53528573-53528592 Msa0818070:intron 10.0%
!! AAATTAATAGTATATCTAAA+TGG - chr5_3:53528716-53528735 None:intergenic 10.0%
!! TATACTATTAATTTAATGAA+TGG + chr5_3:53528722-53528741 Msa0818070:intron 10.0%
!! TTATAATCAGATTTAATAAA+AGG + chr5_3:53528822-53528841 Msa0818070:intron 10.0%
!! AAAATTTCATAAAAGAAAAA+CGG + chr5_3:53530020-53530039 Msa0818070:intron 10.0%
!!! ATTATGAATTAATTTAAAAC+GGG + chr5_3:53530170-53530189 Msa0818070:intron 10.0%
!! TGTAACAAAATTAATAAATA+AGG - chr5_3:53530337-53530356 None:intergenic 10.0%
!! AAATATTGTCAAAAAAAAAA+AGG - chr5_3:53530478-53530497 None:intergenic 10.0%
!! AAAATATTGTCAAAAAATTA+AGG - chr5_3:53530548-53530567 None:intergenic 10.0%
!! CAAAATATTGTTAAAAAAAA+AGG - chr5_3:53530617-53530636 None:intergenic 10.0%
!! AAATATTATAAGAGAAAATT+CGG - chr5_3:53530701-53530720 None:intergenic 10.0%
!! AATAAAATGCAATATATAAT+TGG - chr5_3:53530799-53530818 None:intergenic 10.0%
!! AAAAACAATGTATAATATAT+GGG - chr5_3:53531177-53531196 None:intergenic 10.0%
!! TAAAAACAATGTATAATATA+TGG - chr5_3:53531178-53531197 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + chr5_3:53531587-53531606 Msa0818070:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + chr5_3:53531588-53531607 Msa0818070:intron 10.0%
!!! TTTATTTCATATTTTTTCTA+AGG + chr5_3:53531807-53531826 Msa0818070:intron 10.0%
!! TAGTTTATACAATTTATATA+GGG - chr5_3:53532805-53532824 None:intergenic 10.0%
!! ATAGTTTATACAATTTATAT+AGG - chr5_3:53532806-53532825 None:intergenic 10.0%
!! ATATAAATTGTATAAACTAT+AGG + chr5_3:53532806-53532825 Msa0818070:intron 10.0%
!! TATAAATTGTATAAACTATA+GGG + chr5_3:53532807-53532826 Msa0818070:intron 10.0%
!!! CTTTTTTTTTTTTTTTGAAT+CGG + chr5_3:53533089-53533108 Msa0818070:intron 10.0%
!!! AACCAAATTTTAAATTATTA+AGG - chr5_3:53534380-53534399 None:intergenic 10.0%
!!! TTAATAATTTAAAATTTGGT+TGG + chr5_3:53534379-53534398 Msa0818070:intron 10.0%
!!! AAAATTCTAATTTTCTTTAT+CGG - chr5_3:53534530-53534549 None:intergenic 10.0%
!!! TAATTTTTAATTCTATCAAA+AGG + chr5_3:53534822-53534841 Msa0818070:intron 10.0%
!!! AGTTAAAATAAATTTTTTCA+AGG + chr5_3:53535722-53535741 Msa0818070:intron 10.0%
!!! TAGTATTAAAAGTATATTTT+TGG + chr5_3:53536847-53536866 Msa0818070:intron 10.0%
!!! AAATAGTAAAATAATTTTTG+TGG - chr5_3:53537597-53537616 None:intergenic 10.0%
!! CTTTAATTAATTACATAATT+TGG - chr5_3:53538233-53538252 None:intergenic 10.0%
!!! TTATTTTTTCCTTTTATATA+TGG + chr5_3:53538337-53538356 Msa0818070:three_prime_UTR 10.0%
!!! ATAGTTTGAATTCTTTTTTA+GGG - chr5_3:53528511-53528530 None:intergenic 15.0%
!!! AATAGTTTGAATTCTTTTTT+AGG - chr5_3:53528512-53528531 None:intergenic 15.0%
!!! AGATTTTTTTTTTTTGTTTG+GGG + chr5_3:53528574-53528593 Msa0818070:intron 15.0%
!! TTTAAAAATAAAATACTAGC+AGG - chr5_3:53528770-53528789 None:intergenic 15.0%
!!! ATTTAATAAAAGGATGTTTT+CGG + chr5_3:53528832-53528851 Msa0818070:intron 15.0%
!! TTTAGAAAATTCTCATATAA+TGG - chr5_3:53528990-53529009 None:intergenic 15.0%
!!! ATAAGCAAATTTTACTTTTT+AGG - chr5_3:53529807-53529826 None:intergenic 15.0%
!! TTAAAGATAAAAATATGCAT+TGG + chr5_3:53529925-53529944 Msa0818070:intron 15.0%
!!! TCTTTTATGAAATTTTGATT+TGG - chr5_3:53530016-53530035 None:intergenic 15.0%
!!! TCTTTTTCATGTAAAATTAA+AGG - chr5_3:53530147-53530166 None:intergenic 15.0%
!! TAAATAAGGATGTAAAAAAA+AGG - chr5_3:53530323-53530342 None:intergenic 15.0%
!!! CTTTTTCAAAAAAAAAAAGA+AGG + chr5_3:53531095-53531114 Msa0818070:intron 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + chr5_3:53531589-53531608 Msa0818070:intron 15.0%
!!! GACATTTTTTTTTAGAAAAT+GGG + chr5_3:53531722-53531741 Msa0818070:intron 15.0%
!! ATATGATATTCATATGATAA+TGG - chr5_3:53532217-53532236 None:intergenic 15.0%
!!! ACTTTATCTTTAATTTATGT+AGG - chr5_3:53532471-53532490 None:intergenic 15.0%
!! AATATACATATATCATGAAA+GGG - chr5_3:53533283-53533302 None:intergenic 15.0%
!! AAATATACATATATCATGAA+AGG - chr5_3:53533284-53533303 None:intergenic 15.0%
!! AAAAAAAAATGGTATATTGT+CGG + chr5_3:53534081-53534100 Msa0818070:intron 15.0%
!!! GACCTTAATAATTTAAAATT+TGG + chr5_3:53534375-53534394 Msa0818070:intron 15.0%
!!! AATTCTAATTTTGTTATGAT+AGG - chr5_3:53534498-53534517 None:intergenic 15.0%
!!! GAAAAATATTTTCTCTATTA+AGG - chr5_3:53535675-53535694 None:intergenic 15.0%
!!! AAGGCAAAATTATTATTTTT+AGG + chr5_3:53535741-53535760 Msa0818070:intron 15.0%
!! TTTAAAAAAGTTTGTGAAAA+CGG + chr5_3:53536681-53536700 Msa0818070:intron 15.0%
!!! AAGTATATTTTTGGTATATA+AGG + chr5_3:53536924-53536943 Msa0818070:intron 15.0%
!!! TAATTTTTGACTTGTAATAT+AGG + chr5_3:53537375-53537394 Msa0818070:intron 15.0%
!! ATCTTATAACCATATATAAA+AGG - chr5_3:53538349-53538368 None:intergenic 15.0%
!!! TTGTTGTAACTTTTTTTTGT+AGG - chr5_3:53527782-53527801 None:intergenic 20.0%
!! CTTCATTCATTAAAATAAAC+CGG - chr5_3:53528069-53528088 None:intergenic 20.0%
!!! GGTTTATTTTAATGAATGAA+GGG + chr5_3:53528068-53528087 Msa0818070:CDS 20.0%
!! TTTAGAAGATTCTCATAAAA+CGG - chr5_3:53529054-53529073 None:intergenic 20.0%
!! TTTGAATAATTCTCATAGAA+CGG - chr5_3:53529217-53529236 None:intergenic 20.0%
!!! TTTAGAATATTCTCATAGAA+TGG - chr5_3:53529249-53529268 None:intergenic 20.0%
!! ATTCTATGAGAATATTCTAA+AGG + chr5_3:53529248-53529267 Msa0818070:intron 20.0%
!!! ATTTTATGAGAATGTTTCAA+AGG + chr5_3:53529470-53529489 Msa0818070:intron 20.0%
!! CATTATATGAGAATATTTCA+AGG + chr5_3:53529501-53529520 Msa0818070:intron 20.0%
!! TTTGAATGATTCTTATAGAA+GGG - chr5_3:53529599-53529618 None:intergenic 20.0%
!! TTTGAAAGATTCTCATAAAA+CGG - chr5_3:53529664-53529683 None:intergenic 20.0%
!!! ATCTTCTAAAGATTAACTTT+CGG + chr5_3:53529706-53529725 Msa0818070:intron 20.0%
!! TAAAAGACTAATGATATATG+TGG + chr5_3:53529743-53529762 Msa0818070:intron 20.0%
!! TATTCAAATAATGAAGTATG+TGG - chr5_3:53529782-53529801 None:intergenic 20.0%
!! TCAACTAGATTATCTAATAA+GGG + chr5_3:53529962-53529981 Msa0818070:intron 20.0%
!!! GTGTATTTTTATTCTTTTCT+TGG + chr5_3:53530197-53530216 Msa0818070:intron 20.0%
!! CAGAACAATTAATAAAAAAG+TGG + chr5_3:53530257-53530276 Msa0818070:intron 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG - chr5_3:53530422-53530441 None:intergenic 20.0%
!! TTATTTACCGAATTATTGAT+AGG + chr5_3:53530671-53530690 Msa0818070:intron 20.0%
!! GCAAAAAAATAGAAATATGT+TGG + chr5_3:53530885-53530904 Msa0818070:intron 20.0%
!! AAAGTGGAATATATTGTATT+GGG + chr5_3:53531612-53531631 Msa0818070:intron 20.0%
!!! GGACATTTTTTTTTAGAAAA+TGG + chr5_3:53531721-53531740 Msa0818070:intron 20.0%
!!! TTTTGACCTAAATTTCTTTT+TGG - chr5_3:53531873-53531892 None:intergenic 20.0%
!!! CTATATAGATATTTTTTCAC+TGG + chr5_3:53532191-53532210 Msa0818070:intron 20.0%
!! TATCATATATAGCACAAAAT+TGG + chr5_3:53532229-53532248 Msa0818070:intron 20.0%
!! AAAATCCAAATAAATTTGTG+AGG - chr5_3:53532300-53532319 None:intergenic 20.0%
!!! CTTAGATTTTCCAATATATT+TGG - chr5_3:53532447-53532466 None:intergenic 20.0%
!! AATTGAATGTATCTAAAAAG+TGG - chr5_3:53532987-53533006 None:intergenic 20.0%
!! AATTGAATGTATCTAAAAAG+TGG + chr5_3:53532987-53533006 Msa0818070:intron 20.0%
!!! TTTTTTACTTTTACAAAGAG+TGG - chr5_3:53533057-53533076 None:intergenic 20.0%
!! AAAAGTAAAAAAGTTGACAT+AGG + chr5_3:53533065-53533084 Msa0818070:intron 20.0%
!! ATCTTCTTACTTTGTATTTA+TGG + chr5_3:53533186-53533205 Msa0818070:intron 20.0%
!! TCTATGTAGAATTTCTATTA+TGG + chr5_3:53533607-53533626 Msa0818070:intron 20.0%
!! ATCAATATGTTCAATTATGT+AGG + chr5_3:53533726-53533745 Msa0818070:intron 20.0%
!! CTCAACAAATATTTATGTAA+CGG + chr5_3:53534032-53534051 Msa0818070:intron 20.0%
!! TTGTGCAAAGAAAAAAAAAA+TGG + chr5_3:53534070-53534089 Msa0818070:intron 20.0%
!!! TAATTTAAAATTTGGTTGGA+AGG + chr5_3:53534383-53534402 Msa0818070:intron 20.0%
!!! TTTTCTCAAGAAAATTTTAG+TGG - chr5_3:53534598-53534617 None:intergenic 20.0%
!! TAAAGTTTAAACAATGCTAA+AGG + chr5_3:53534966-53534985 Msa0818070:intron 20.0%
!!! TACTTAAAACAGTTTTGAAT+CGG + chr5_3:53535121-53535140 Msa0818070:intron 20.0%
!! ACTAGTTAAGGAATTATAAA+AGG - chr5_3:53535430-53535449 None:intergenic 20.0%
!! AAATACTCTATTATTCCAAT+GGG - chr5_3:53535485-53535504 None:intergenic 20.0%
!! AAAATACTCTATTATTCCAA+TGG - chr5_3:53535486-53535505 None:intergenic 20.0%
!!! TTTTTCTTGAAAGGATAATA+AGG - chr5_3:53535540-53535559 None:intergenic 20.0%
!!! TAGCTTTTATTTTTCTTGAA+AGG - chr5_3:53535549-53535568 None:intergenic 20.0%
!!! ATTTTCATGACAAACTTTTT+AGG - chr5_3:53535805-53535824 None:intergenic 20.0%
!! CGATCAAATGAATAAATTAA+AGG - chr5_3:53535888-53535907 None:intergenic 20.0%
!! ATTATGATATACTAGTAGTA+AGG + chr5_3:53536657-53536676 Msa0818070:intron 20.0%
!! TTATGATATACTAGTAGTAA+GGG + chr5_3:53536658-53536677 Msa0818070:intron 20.0%
!! TAAAAAAAAATACTACGTCA+TGG + chr5_3:53537809-53537828 Msa0818070:intron 20.0%
!! AACTGTATTATTACTTATAC+TGG - chr5_3:53538258-53538277 None:intergenic 20.0%
! TATTGAGAGAGAATCTAAAA+GGG - chr5_3:53527580-53527599 None:intergenic 25.0%
! ACTATATGTGAATGTTATGT+TGG - chr5_3:53527735-53527754 None:intergenic 25.0%
!!! CGGTTTATTTTAATGAATGA+AGG + chr5_3:53528067-53528086 Msa0818070:CDS 25.0%
! AAGATGATCCTTAATAATTG+AGG - chr5_3:53528215-53528234 None:intergenic 25.0%
! ATCTTCTTCTTGATATTGAT+CGG + chr5_3:53528230-53528249 Msa0818070:CDS 25.0%
! AAGTGTTTATTCTATACTAG+TGG + chr5_3:53528410-53528429 Msa0818070:intron 25.0%
! ACCAAAACGTTACATATATT+AGG + chr5_3:53528603-53528622 Msa0818070:intron 25.0%
! AATAAAACAAAGATCATGCA+TGG - chr5_3:53528665-53528684 None:intergenic 25.0%
! AGTTGGAAAAATTGTGAAAA+TGG + chr5_3:53528858-53528877 Msa0818070:intron 25.0%
!! ATAATTTTCATTACACCTCA+AGG + chr5_3:53528924-53528943 Msa0818070:intron 25.0%
! GTTCTATCAGAATCATTTAA+AGG + chr5_3:53529021-53529040 Msa0818070:intron 25.0%
! TTTGAAAGATTCTCATAGAA+CGG - chr5_3:53529087-53529106 None:intergenic 25.0%
! TTTAGAAGATTCTCATAGAA+CGG - chr5_3:53529185-53529204 None:intergenic 25.0%
! GTTCTATGAGAATTATTCAA+AGG + chr5_3:53529216-53529235 Msa0818070:intron 25.0%
!! CATTTTATGAGAATCTTTCA+AGG + chr5_3:53529312-53529331 Msa0818070:intron 25.0%
! AAACATTCTCATAAAATGAG+AGG - chr5_3:53529467-53529486 None:intergenic 25.0%
! TTTAGAAAAATCTCATTGAG+TGG - chr5_3:53529567-53529586 None:intergenic 25.0%
! CTTTGAATGATTCTTATAGA+AGG - chr5_3:53529600-53529619 None:intergenic 25.0%
! TTTAGAAGATTCTCATAGAA+CGG - chr5_3:53529185-53529204 None:intergenic 25.0%
! TTGAAAGATTCTCATAAAAC+GGG - chr5_3:53529663-53529682 None:intergenic 25.0%
! TTGCTTATAATTAGAAACAG+AGG + chr5_3:53529819-53529838 Msa0818070:intron 25.0%
! TGCTTATAATTAGAAACAGA+GGG + chr5_3:53529820-53529839 Msa0818070:intron 25.0%
! GTCAACTAGATTATCTAATA+AGG + chr5_3:53529961-53529980 Msa0818070:intron 25.0%
! TGTTATCGCAATAAAAATAG+CGG + chr5_3:53530058-53530077 Msa0818070:intron 25.0%
!! ATGAATTAATTTAAAACGGG+AGG + chr5_3:53530173-53530192 Msa0818070:intron 25.0%
! AAATTAGGTTAAGTTATTGC+AGG - chr5_3:53530360-53530379 None:intergenic 25.0%
! ACATAATAAAGCAAATGAGA+GGG - chr5_3:53530385-53530404 None:intergenic 25.0%
! AACATAATAAAGCAAATGAG+AGG - chr5_3:53530386-53530405 None:intergenic 25.0%
! TTGTTAAAAAAAAAGGCAAG+AGG - chr5_3:53530610-53530629 None:intergenic 25.0%
!!! GTGTTTTATTTTGTCTACTA+CGG + chr5_3:53530744-53530763 Msa0818070:intron 25.0%
! ATTCATAGTTAGCATAATTC+AGG - chr5_3:53530936-53530955 None:intergenic 25.0%
!! TAAATTTCACCAGATTTTAG+TGG + chr5_3:53531336-53531355 Msa0818070:intron 25.0%
!!! CTTTTTTATAATTGTAGTCG+TGG + chr5_3:53531416-53531435 Msa0818070:intron 25.0%
! GAAAGTGGAATATATTGTAT+TGG + chr5_3:53531611-53531630 Msa0818070:intron 25.0%
!! TTGAAATGACTCAGTTATTT+TGG + chr5_3:53531699-53531718 Msa0818070:intron 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG + chr5_3:53531700-53531719 Msa0818070:intron 25.0%
! ACAAAGCCAAAAAGAAATTT+AGG + chr5_3:53531864-53531883 Msa0818070:intron 25.0%
! ATATATAGCACAAAATTGGT+GGG + chr5_3:53532233-53532252 Msa0818070:intron 25.0%
! ATAAACAATTCAGCTAATGT+AGG - chr5_3:53532760-53532779 None:intergenic 25.0%
! TACATTAGCTGAATTGTTTA+TGG + chr5_3:53532759-53532778 Msa0818070:intron 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG - chr5_3:53533011-53533030 None:intergenic 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + chr5_3:53533011-53533030 Msa0818070:intron 25.0%
!!! CTTTTACATTTTTAGGATGA+GGG - chr5_3:53533257-53533276 None:intergenic 25.0%
!!! TCTTTTACATTTTTAGGATG+AGG - chr5_3:53533258-53533277 None:intergenic 25.0%
!! AGGGATTCTTTTACATTTTT+AGG - chr5_3:53533264-53533283 None:intergenic 25.0%
!!! ACCATATTGTTGTTTTTGTT+TGG + chr5_3:53533394-53533413 Msa0818070:intron 25.0%
! ACCAAACAAAAACAACAATA+TGG - chr5_3:53533398-53533417 None:intergenic 25.0%
! TAGAAATTCTACATAGATGA+TGG - chr5_3:53533604-53533623 None:intergenic 25.0%
! GAACTTATTACCAAAGTTTA+AGG + chr5_3:53533629-53533648 Msa0818070:intron 25.0%
! TAAATGTCTACCTTAAACTT+TGG - chr5_3:53533642-53533661 None:intergenic 25.0%
! AAGGTAGACATTTATTAAGT+CGG + chr5_3:53533648-53533667 Msa0818070:intron 25.0%
! AAGAAGAAAAGAATGTGTAA+TGG + chr5_3:53533792-53533811 Msa0818070:CDS 25.0%
! AGAAGAAAAGAATGTGTAAT+GGG + chr5_3:53533793-53533812 Msa0818070:CDS 25.0%
! TTATGTAACGGTATCTAATT+AGG + chr5_3:53534044-53534063 Msa0818070:intron 25.0%
! TGTAGTAGTATTATTTAGCT+AGG + chr5_3:53534145-53534164 Msa0818070:intron 25.0%
! GTAGTAGTATTATTTAGCTA+GGG + chr5_3:53534146-53534165 Msa0818070:intron 25.0%
! AGTCCAATAATATAGCTATA+GGG - chr5_3:53534309-53534328 None:intergenic 25.0%
! TAGTCCAATAATATAGCTAT+AGG - chr5_3:53534310-53534329 None:intergenic 25.0%
! CATACTATAAGTATCTTTGT+CGG + chr5_3:53534626-53534645 Msa0818070:intron 25.0%
! TAAACTCAGTATTCAATCTA+AGG + chr5_3:53534673-53534692 Msa0818070:intron 25.0%
! TTTAATTGAAGTTCTGCAAT+TGG - chr5_3:53534730-53534749 None:intergenic 25.0%
! AATTGCAGAACTTCAATTAA+AGG + chr5_3:53534729-53534748 Msa0818070:intron 25.0%
! ATATTGAAACTTGGAGTTAA+AGG + chr5_3:53535146-53535165 Msa0818070:intron 25.0%
!! AAAATTTGAAACTCATGCAT+TGG + chr5_3:53535211-53535230 Msa0818070:intron 25.0%
! TTTGGGGATAGATTAAATAA+GGG + chr5_3:53535276-53535295 Msa0818070:intron 25.0%
! TTTGAAAAGGTCGATAAATT+TGG - chr5_3:53536041-53536060 None:intergenic 25.0%
!! TTGACATGTCTTCAATTTTT+GGG - chr5_3:53536138-53536157 None:intergenic 25.0%
!! TTTGACATGTCTTCAATTTT+TGG - chr5_3:53536139-53536158 None:intergenic 25.0%
! CATTAGAAGACTTTAAGTAA+AGG - chr5_3:53536261-53536280 None:intergenic 25.0%
!!! AAGGTTTTAAATAGTGTTTG+CGG - chr5_3:53536821-53536840 None:intergenic 25.0%
!! ACTTTTAATACTACATCACA+AGG - chr5_3:53536840-53536859 None:intergenic 25.0%
!!! GTATATTTTTGGTGTAACTA+AGG + chr5_3:53536858-53536877 Msa0818070:intron 25.0%
! TTATTAAACTCCCAAGTTAT+AGG - chr5_3:53536979-53536998 None:intergenic 25.0%
!!! TGCTTTTTTTGTATGTGAAA+CGG - chr5_3:53537164-53537183 None:intergenic 25.0%
! ACATAATTAGTGGGATATTT+AGG + chr5_3:53537264-53537283 Msa0818070:CDS 25.0%
! CTCTCTCATTTCATATTTAT+AGG + chr5_3:53537512-53537531 Msa0818070:intron 25.0%
! AGATTCAGATATAAGGTATA+AGG - chr5_3:53537651-53537670 None:intergenic 25.0%
! TTGTTAGAGATTCAGATATA+AGG - chr5_3:53537658-53537677 None:intergenic 25.0%
GTATTGAGAGAGAATCTAAA+AGG - chr5_3:53527581-53527600 None:intergenic 30.0%
AAGTTACAACAACTTTCTCA+TGG + chr5_3:53527790-53527809 Msa0818070:exon 30.0%
TGCTAACTCCTCAATTATTA+AGG + chr5_3:53528204-53528223 Msa0818070:CDS 30.0%
! GCCTAATATATGTAACGTTT+TGG - chr5_3:53528607-53528626 None:intergenic 30.0%
AGAATGATAGTTAATCCTTG+AGG - chr5_3:53528942-53528961 None:intergenic 30.0%
AAAGATTCTCATAGAATGAG+AGG - chr5_3:53529278-53529297 None:intergenic 30.0%
TTTAGAAGATTCTCATGGAA+CGG - chr5_3:53529438-53529457 None:intergenic 30.0%
! TAGTCTTTAGAAGATTCTCA+TGG - chr5_3:53529190-53529209 None:intergenic 30.0%
CTAGATTATCTAATAAGGGA+CGG + chr5_3:53529966-53529985 Msa0818070:intron 30.0%
ATTGTTTAATAGCTATCGAC+CGG + chr5_3:53530291-53530310 Msa0818070:intron 30.0%
!!! GTGTGATGCATTTTTTTAGA+TGG - chr5_3:53530433-53530452 None:intergenic 30.0%
AAAAAAAAAGGCAAGAGGAT+AGG - chr5_3:53530466-53530485 None:intergenic 30.0%
GTCAAAAAAAAAAAGGCAAG+AGG - chr5_3:53530471-53530490 None:intergenic 30.0%
TGTCAAAAAATTAAGGCAAG+AGG - chr5_3:53530541-53530560 None:intergenic 30.0%
AAAAAAAAAGGCAAGAGGAT+AGG - chr5_3:53530466-53530485 None:intergenic 30.0%
CGGTAATCCTATCAATAATT+CGG - chr5_3:53530681-53530700 None:intergenic 30.0%
CAACTCTTCATAACATCTTT+AGG - chr5_3:53531233-53531252 None:intergenic 30.0%
TGATGTGATAGTAATTGCAA+TGG - chr5_3:53531452-53531471 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr5_3:53531596-53531615 Msa0818070:intron 30.0%
AGAAAATGGGTCAGATATTT+CGG + chr5_3:53531735-53531754 Msa0818070:intron 30.0%
TGTCTTTATTACCAACCATA+AGG - chr5_3:53531779-53531798 None:intergenic 30.0%
CATATATAGCACAAAATTGG+TGG + chr5_3:53532232-53532251 Msa0818070:intron 30.0%
AGATAAACTTGAGACTACTA+TGG + chr5_3:53532511-53532530 Msa0818070:intron 30.0%
AATCCAGAATTAGCTAAAGA+GGG - chr5_3:53532576-53532595 None:intergenic 30.0%
GATTAGATTTATGTGTGTGA+TGG + chr5_3:53532652-53532671 Msa0818070:intron 30.0%
CAAGATGCACTAATAAGTTT+GGG + chr5_3:53533139-53533158 Msa0818070:intron 30.0%
!! TAATAAGTTTGGGTTGACAT+AGG + chr5_3:53533149-53533168 Msa0818070:intron 30.0%
TTCCCAAATTTGAATTGACA+AGG + chr5_3:53533335-53533354 Msa0818070:intron 30.0%
TCCCAAATTTGAATTGACAA+GGG + chr5_3:53533336-53533355 Msa0818070:intron 30.0%
ACCCTTGTCAATTCAAATTT+GGG - chr5_3:53533340-53533359 None:intergenic 30.0%
AACCCTTGTCAATTCAAATT+TGG - chr5_3:53533341-53533360 None:intergenic 30.0%
TCGATGATAAATAATGTCTC+TGG - chr5_3:53533698-53533717 None:intergenic 30.0%
! AGGAATTAACATTGATTGTG+AGG + chr5_3:53533767-53533786 Msa0818070:CDS 30.0%
GAAGAAAAGAATGTGTAATG+GGG + chr5_3:53533794-53533813 Msa0818070:CDS 30.0%
AAGAAAAGAATGTGTAATGG+GGG + chr5_3:53533795-53533814 Msa0818070:CDS 30.0%
ACATGAAATCGACTATTTGT+TGG - chr5_3:53533876-53533895 None:intergenic 30.0%
! ACAAATAGTCGATTTCATGT+TGG + chr5_3:53533876-53533895 Msa0818070:CDS 30.0%
AGTGGACCATATATAGATAT+AGG + chr5_3:53534170-53534189 Msa0818070:intron 30.0%
CATGGACCTATATCTATATA+TGG - chr5_3:53534179-53534198 None:intergenic 30.0%
TAACGAAAATGAGGTTTCAA+AGG - chr5_3:53534263-53534282 None:intergenic 30.0%
!!! CTTTTTTTCTGAGAATCAGA+TGG - chr5_3:53534456-53534475 None:intergenic 30.0%
GGTGTGAGTAAAATCTTTAT+CGG - chr5_3:53534560-53534579 None:intergenic 30.0%
GAATCGGTAATATTGAAACT+TGG + chr5_3:53535137-53535156 Msa0818070:intron 30.0%
!! ACTGCAATGTAAAGTTTTAG+GGG - chr5_3:53535176-53535195 None:intergenic 30.0%
! CACTGCAATGTAAAGTTTTA+GGG - chr5_3:53535177-53535196 None:intergenic 30.0%
! TCACTGCAATGTAAAGTTTT+AGG - chr5_3:53535178-53535197 None:intergenic 30.0%
GTTTGGGGATAGATTAAATA+AGG + chr5_3:53535275-53535294 Msa0818070:intron 30.0%
ACTAGTTAAGCAGCTAAAAA+CGG + chr5_3:53535323-53535342 Msa0818070:intron 30.0%
CAGACTTACTTCAATATTGA+TGG - chr5_3:53535510-53535529 None:intergenic 30.0%
CATCAATATTGAAGTAAGTC+TGG + chr5_3:53535508-53535527 Msa0818070:intron 30.0%
GTAATGCTAACAAGTATTCT+AGG + chr5_3:53535600-53535619 Msa0818070:intron 30.0%
!!! GCTTAAACAATGTTGTTTTC+AGG + chr5_3:53535907-53535926 Msa0818070:intron 30.0%
CAAAGAATGTTTGTTCACTT+CGG + chr5_3:53536155-53536174 Msa0818070:intron 30.0%
AAATTACCAGAACTGATGAA+AGG + chr5_3:53536455-53536474 Msa0818070:intron 30.0%
!!! TGTGTCATTTTGTAAAGACT+TGG + chr5_3:53536483-53536502 Msa0818070:intron 30.0%
! AAAACTAGTTCTCCAAAAGA+GGG - chr5_3:53536519-53536538 None:intergenic 30.0%
CAGCAGAAGATTTATGTATA+GGG + chr5_3:53536548-53536567 Msa0818070:intron 30.0%
TTGATTGCAATTGCATCATT+AGG - chr5_3:53536635-53536654 None:intergenic 30.0%
!!! AGGTTTTAAATAGTGTTTGC+GGG - chr5_3:53536820-53536839 None:intergenic 30.0%
! AACTTTTCTTTGCTCTGATT+TGG - chr5_3:53537040-53537059 None:intergenic 30.0%
!!! GCTTTTTTTGTATGTGAAAC+GGG - chr5_3:53537163-53537182 None:intergenic 30.0%
ATGACAGACATCAATATCAA+AGG + chr5_3:53537293-53537312 Msa0818070:CDS 30.0%
TTAACTCATTGACCAAAATG+AGG + chr5_3:53537625-53537644 Msa0818070:intron 30.0%
TTAGGCTTGATTAAACATAG+AGG - chr5_3:53537687-53537706 None:intergenic 30.0%
TCTATGTTTAATCAAGCCTA+AGG + chr5_3:53537686-53537705 Msa0818070:intron 30.0%
TGAGAATAAGAAAAATGCTG+TGG - chr5_3:53538051-53538070 None:intergenic 30.0%
! AGATGTCTTGTTAAATCACT+TGG + chr5_3:53538375-53538394 Msa0818070:three_prime_UTR 30.0%
AGAGAATCTAAAAGGGAAGA+AGG - chr5_3:53527573-53527592 None:intergenic 35.0%
!!! CCATCTTTTTTCTCATTCAC+CGG + chr5_3:53527843-53527862 Msa0818070:CDS 35.0%
! ATCTTCACTACTCACGTTTT+CGG + chr5_3:53528007-53528026 Msa0818070:CDS 35.0%
!! AAAATAAACCGGTTCGTTTC+CGG - chr5_3:53528058-53528077 None:intergenic 35.0%
! CTTTTTGAATGTAGTTACCC+CGG + chr5_3:53528094-53528113 Msa0818070:CDS 35.0%
AAAAGGTTCGATATTGAACC+GGG - chr5_3:53528115-53528134 None:intergenic 35.0%
CAAAAGGTTCGATATTGAAC+CGG - chr5_3:53528116-53528135 None:intergenic 35.0%
! GGTTCAATATCGAACCTTTT+GGG + chr5_3:53528115-53528134 Msa0818070:CDS 35.0%
CACTCTTTGCTTCTTATGAA+AGG + chr5_3:53528142-53528161 Msa0818070:CDS 35.0%
! TTGATATTGATCGGCTCATT+CGG + chr5_3:53528239-53528258 Msa0818070:CDS 35.0%
! TTCGGCTTAATTTGGATTCT+TGG + chr5_3:53528257-53528276 Msa0818070:CDS 35.0%
AATCAAGTAGCTAACCTTCT+TGG - chr5_3:53528311-53528330 None:intergenic 35.0%
ACGTTACATATATTAGGCTC+TGG + chr5_3:53528609-53528628 Msa0818070:intron 35.0%
! AAGGATGTTTTCGGTATAGT+TGG + chr5_3:53528841-53528860 Msa0818070:intron 35.0%
! TGTAAAAAAAAGGCATGAGC+CGG - chr5_3:53530313-53530332 None:intergenic 35.0%
GCAAATGAGAGGGAAAAATT+AGG - chr5_3:53530375-53530394 None:intergenic 35.0%
CAAGAGGATAGGAATGAAAT+TGG - chr5_3:53530455-53530474 None:intergenic 35.0%
CATAGTTAGCATAATTCAGG+TGG - chr5_3:53530933-53530952 None:intergenic 35.0%
TATGTCTTACACATAGCAGT+AGG - chr5_3:53531044-53531063 None:intergenic 35.0%
GTGATCTTACCTGTAATTGT+CGG - chr5_3:53531076-53531095 None:intergenic 35.0%
!! AGAAAAGTGCCACTAAAATC+TGG - chr5_3:53531348-53531367 None:intergenic 35.0%
GAAAATGGGTCAGATATTTC+GGG + chr5_3:53531736-53531755 Msa0818070:intron 35.0%
GGAGTATAAAACCTTATGGT+TGG + chr5_3:53531765-53531784 Msa0818070:intron 35.0%
!! TTTCTAAGGCTTATGCTAAC+AGG + chr5_3:53531821-53531840 Msa0818070:intron 35.0%
! TAACTCAAATAGTTGGTGTG+TGG - chr5_3:53532053-53532072 None:intergenic 35.0%
CAGAGTCTAACTCAAATAGT+TGG - chr5_3:53532060-53532079 None:intergenic 35.0%
CTGCACCTCACAAATTTATT+TGG + chr5_3:53532292-53532311 Msa0818070:intron 35.0%
CAATCCAGAATTAGCTAAAG+AGG - chr5_3:53532577-53532596 None:intergenic 35.0%
GTGTGATGGTATAATGAAAC+CGG + chr5_3:53532666-53532685 Msa0818070:intron 35.0%
TCTAACTCTATGCATATACG+AGG + chr5_3:53532733-53532752 Msa0818070:intron 35.0%
TGATTAGATTATACACCCTC+CGG + chr5_3:53532880-53532899 Msa0818070:intron 35.0%
GTATAATCTAATACACCCTC+CGG - chr5_3:53533033-53533052 None:intergenic 35.0%
ACTTATTAGTGCATCTTGCA+CGG - chr5_3:53533137-53533156 None:intergenic 35.0%
GCAAGATGCACTAATAAGTT+TGG + chr5_3:53533138-53533157 Msa0818070:intron 35.0%
ATTCAAATTTGGGAACGTGA+GGG - chr5_3:53533330-53533349 None:intergenic 35.0%
AATTCAAATTTGGGAACGTG+AGG - chr5_3:53533331-53533350 None:intergenic 35.0%
AATTATGTAGGCAAGAACGA+AGG + chr5_3:53533738-53533757 Msa0818070:intron 35.0%
! GAAATCGACTATTTGTTGGT+CGG - chr5_3:53533872-53533891 None:intergenic 35.0%
GAATGTCATTATGGTAGAAG+TGG - chr5_3:53533926-53533945 None:intergenic 35.0%
GTATTATTTAGCTAGGGTAG+TGG + chr5_3:53534152-53534171 Msa0818070:intron 35.0%
AGGAACAGATAACGAAAATG+AGG - chr5_3:53534272-53534291 None:intergenic 35.0%
CAATAATATAGCTATAGGGC+GGG - chr5_3:53534305-53534324 None:intergenic 35.0%
CCAATAATATAGCTATAGGG+CGG - chr5_3:53534306-53534325 None:intergenic 35.0%
TTTCTTAACCCTACGATTTC+AGG + chr5_3:53534345-53534364 Msa0818070:intron 35.0%
ATTGAAGTTCTGCAATTGGA+TGG - chr5_3:53534726-53534745 None:intergenic 35.0%
GCAGAACTTCAATTAAAGGA+TGG + chr5_3:53534733-53534752 Msa0818070:intron 35.0%
ATCAGTAGTTTATGAGCAAG+TGG - chr5_3:53534903-53534922 None:intergenic 35.0%
AAAAGGGGAAAGAGATTTGA+TGG + chr5_3:53535070-53535089 Msa0818070:intron 35.0%
!!! GATTTGATGGCTTGTTTTGT+TGG + chr5_3:53535083-53535102 Msa0818070:intron 35.0%
AACCATCAAAGAGGATTATG+TGG + chr5_3:53535246-53535265 Msa0818070:intron 35.0%
ACCATCAAAGAGGATTATGT+GGG + chr5_3:53535247-53535266 Msa0818070:intron 35.0%
CACTAGTTAACATTTCCCAT+TGG + chr5_3:53535467-53535486 Msa0818070:intron 35.0%
CTTTGCTAACTCTAACCTAA+GGG - chr5_3:53535780-53535799 None:intergenic 35.0%
TCTTTGCTAACTCTAACCTA+AGG - chr5_3:53535781-53535800 None:intergenic 35.0%
TAATATCAGCGCTATTCGAA+TGG + chr5_3:53536220-53536239 Msa0818070:intron 35.0%
AACTGCATGCTTAGTAACTA+TGG + chr5_3:53536409-53536428 Msa0818070:intron 35.0%
! CAAAACTAGTTCTCCAAAAG+AGG - chr5_3:53536520-53536539 None:intergenic 35.0%
GCAGCAGAAGATTTATGTAT+AGG + chr5_3:53536547-53536566 Msa0818070:intron 35.0%
GATTGAGAATTGCATTGTGT+GGG + chr5_3:53536880-53536899 Msa0818070:intron 35.0%
AATCCCAAGTTCCTATAACT+TGG + chr5_3:53536965-53536984 Msa0818070:intron 35.0%
ATCCCAAGTTCCTATAACTT+GGG + chr5_3:53536966-53536985 Msa0818070:intron 35.0%
TGGGAGTTTAATAAGAGACT+TGG + chr5_3:53536985-53537004 Msa0818070:intron 35.0%
GGGAGTTTAATAAGAGACTT+GGG + chr5_3:53536986-53537005 Msa0818070:intron 35.0%
AGGTTGTGAATGAGACTTTA+AGG + chr5_3:53537234-53537253 Msa0818070:intron 35.0%
! TGTGAATGAGACTTTAAGGA+TGG + chr5_3:53537238-53537257 Msa0818070:CDS 35.0%
AGGATGGCAAACATAATTAG+TGG + chr5_3:53537254-53537273 Msa0818070:CDS 35.0%
GGATGGCAAACATAATTAGT+GGG + chr5_3:53537255-53537274 Msa0818070:CDS 35.0%
TATAGGCTACACTATTCCAA+AGG + chr5_3:53537392-53537411 Msa0818070:intron 35.0%
ATAGGCTACACTATTCCAAA+GGG + chr5_3:53537393-53537412 Msa0818070:intron 35.0%
! TAAGGTATAAGGCCTCATTT+TGG - chr5_3:53537640-53537659 None:intergenic 35.0%
GCTTGATTAAACATAGAGGA+AGG - chr5_3:53537683-53537702 None:intergenic 35.0%
! GAGACGAGATTTAAAACCTT+AGG - chr5_3:53537705-53537724 None:intergenic 35.0%
!!! AAGGTTTTAAATCTCGTCTC+TGG + chr5_3:53537705-53537724 Msa0818070:intron 35.0%
GCAATCTAAAGATGAGATCA+TGG - chr5_3:53537852-53537871 None:intergenic 35.0%
ACGGTGTATATACATTTGCA+GGG - chr5_3:53537929-53537948 None:intergenic 35.0%
AACGGTGTATATACATTTGC+AGG - chr5_3:53537930-53537949 None:intergenic 35.0%
GCAAATGTATATACACCGTT+TGG + chr5_3:53537930-53537949 Msa0818070:CDS 35.0%
AATGTATATACACCGTTTGG+TGG + chr5_3:53537933-53537952 Msa0818070:CDS 35.0%
ACCTGTAACAAGTTACAATG+CGG - chr5_3:53538019-53538038 None:intergenic 35.0%
TTTCAATTGTATGCCTCAGT+TGG + chr5_3:53538119-53538138 Msa0818070:intron 35.0%
TCCTGCAGAAGAAGATAAAT+TGG + chr5_3:53538144-53538163 Msa0818070:CDS 35.0%
ACCAATTTATCTTCTTCTGC+AGG - chr5_3:53538148-53538167 None:intergenic 35.0%
TTTCGAGGAAAGGCGATTAA+TGG - chr5_3:53527633-53527652 None:intergenic 40.0%
CCGGTGAATGAGAAAAAAGA+TGG - chr5_3:53527846-53527865 None:intergenic 40.0%
TGCATAGTTTCCCCTACAAA+GGG - chr5_3:53527917-53527936 None:intergenic 40.0%
TTGCATAGTTTCCCCTACAA+AGG - chr5_3:53527918-53527937 None:intergenic 40.0%
!! TATGAATGGTTCTGGGTTGT+CGG - chr5_3:53527960-53527979 None:intergenic 40.0%
TAGTGAAGATTGAACCGTAC+CGG - chr5_3:53527997-53528016 None:intergenic 40.0%
!!! AACTGTTTTTTCAGCTGACC+CGG + chr5_3:53528036-53528055 Msa0818070:CDS 40.0%
!! AAATAAACCGGTTCGTTTCC+GGG - chr5_3:53528057-53528076 None:intergenic 40.0%
AAAGGTTCGATATTGAACCG+GGG - chr5_3:53528114-53528133 None:intergenic 40.0%
! CGGTTCAATATCGAACCTTT+TGG + chr5_3:53528114-53528133 Msa0818070:CDS 40.0%
!!! GCAAAGAGTGTTTTCCCAAA+AGG - chr5_3:53528132-53528151 None:intergenic 40.0%
! CATATATTAGGCTCTGGCTA+CGG + chr5_3:53528615-53528634 Msa0818070:intron 40.0%
TTAGCATAATTCAGGTGGCA+GGG - chr5_3:53530928-53530947 None:intergenic 40.0%
GTACATGAACCGACAATTAC+AGG + chr5_3:53531064-53531083 Msa0818070:intron 40.0%
AACAGATAAATTGGGACGGA+GGG - chr5_3:53531544-53531563 None:intergenic 40.0%
AGGGAACAGATAAATTGGGA+CGG - chr5_3:53531548-53531567 None:intergenic 40.0%
TCCCAATTTATCTGTTCCCT+TGG + chr5_3:53531548-53531567 Msa0818070:intron 40.0%
GCCAAGGGAACAGATAAATT+GGG - chr5_3:53531552-53531571 None:intergenic 40.0%
AGCCAAGGGAACAGATAAAT+TGG - chr5_3:53531553-53531572 None:intergenic 40.0%
ATCTGTGTGAAATGAGCCAA+GGG - chr5_3:53531567-53531586 None:intergenic 40.0%
AATCTGTGTGAAATGAGCCA+AGG - chr5_3:53531568-53531587 None:intergenic 40.0%
! GGAGGGAGTATAAAACCTTA+TGG + chr5_3:53531761-53531780 Msa0818070:intron 40.0%
! ATAGCACAAAATTGGTGGGT+AGG + chr5_3:53532237-53532256 Msa0818070:intron 40.0%
! TAGCACAAAATTGGTGGGTA+GGG + chr5_3:53532238-53532257 Msa0818070:intron 40.0%
ATTTGTGAGGTGCAGAAAAC+CGG - chr5_3:53532287-53532306 None:intergenic 40.0%
GCGTGTCTCACCAAATATAT+TGG + chr5_3:53532434-53532453 Msa0818070:intron 40.0%
GTTCCCTCTTTAGCTAATTC+TGG + chr5_3:53532570-53532589 Msa0818070:intron 40.0%
GAGTCACAACAATTGAACAC+CGG - chr5_3:53532688-53532707 None:intergenic 40.0%
GAGTTAGACACACTGTACTA+AGG - chr5_3:53532721-53532740 None:intergenic 40.0%
TGCTTATATTAGTGACCGGA+GGG - chr5_3:53533015-53533034 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG - chr5_3:53533014-53533033 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG + chr5_3:53533014-53533033 Msa0818070:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG + chr5_3:53533015-53533034 Msa0818070:intron 40.0%
TTCAAATTTGGGAACGTGAG+GGG - chr5_3:53533329-53533348 None:intergenic 40.0%
!! TGAGTTTTGATCCAGGTGAA+TGG + chr5_3:53533458-53533477 Msa0818070:CDS 40.0%
GAGACAAAAACTGACATGCT+AGG + chr5_3:53533817-53533836 Msa0818070:CDS 40.0%
! CTATTTGTTGGTCGGAAAAG+TGG - chr5_3:53533864-53533883 None:intergenic 40.0%
CTTGATCGCGAATGTCATTA+TGG - chr5_3:53533935-53533954 None:intergenic 40.0%
CCGCCCTATAGCTATATTAT+TGG + chr5_3:53534303-53534322 Msa0818070:intron 40.0%
CCTTTCTTCCTGAAATCGTA+GGG - chr5_3:53534356-53534375 None:intergenic 40.0%
TCCTTTCTTCCTGAAATCGT+AGG - chr5_3:53534357-53534376 None:intergenic 40.0%
! ATCGATCTCAGGTTCACTTT+TGG + chr5_3:53534425-53534444 Msa0818070:intron 40.0%
! GATTTTACTCACACCTCTCA+AGG + chr5_3:53534565-53534584 Msa0818070:intron 40.0%
AAGTTCTGCAATTGGATGGT+GGG - chr5_3:53534722-53534741 None:intergenic 40.0%
TAGATAGCACATAGAGAGCA+TGG - chr5_3:53534760-53534779 None:intergenic 40.0%
! TTTACTGTGATAGTGAGACG+AGG + chr5_3:53535039-53535058 Msa0818070:intron 40.0%
AGACGAGGTGAAAGACAAAA+GGG + chr5_3:53535054-53535073 Msa0818070:intron 40.0%
!! TTGAAACTCATGCATTGGCT+TGG + chr5_3:53535216-53535235 Msa0818070:intron 40.0%
ACCCACATAATCCTCTTTGA+TGG - chr5_3:53535251-53535270 None:intergenic 40.0%
TCAAAGAGGATTATGTGGGT+AGG + chr5_3:53535251-53535270 Msa0818070:intron 40.0%
GATTATGTGGGTAGGTGTTT+GGG + chr5_3:53535259-53535278 Msa0818070:intron 40.0%
ATTATGTGGGTAGGTGTTTG+GGG + chr5_3:53535260-53535279 Msa0818070:intron 40.0%
TAATTCCTTAACTAGTGCCC+CGG + chr5_3:53535434-53535453 Msa0818070:intron 40.0%
TTGTTCACTTCGGAAAGAGT+TGG + chr5_3:53536165-53536184 Msa0818070:intron 40.0%
!! GCTCTAGAAAGTCCAATTTG+TGG + chr5_3:53536377-53536396 Msa0818070:intron 40.0%
AGAAAGTCCAATTTGTGGAC+CGG + chr5_3:53536382-53536401 Msa0818070:intron 40.0%
ACAAGTCCTTTCATCAGTTC+TGG - chr5_3:53536464-53536483 None:intergenic 40.0%
GAGTAAAGCACGATTTCTCA+TGG - chr5_3:53536590-53536609 None:intergenic 40.0%
GCATCATTAGGTCAACGAAA+TGG - chr5_3:53536623-53536642 None:intergenic 40.0%
ATTCGCAACTTCAGCTATCA+CGG - chr5_3:53536784-53536803 None:intergenic 40.0%
GGATTGAGAATTGCATTGTG+TGG + chr5_3:53536879-53536898 Msa0818070:intron 40.0%
CTCCCAAGTTATAGGAACTT+GGG - chr5_3:53536971-53536990 None:intergenic 40.0%
ACTCCCAAGTTATAGGAACT+TGG - chr5_3:53536972-53536991 None:intergenic 40.0%
! AGACTTGGGTTTGTCTGTTT+TGG + chr5_3:53537000-53537019 Msa0818070:intron 40.0%
AAGTTGCCAAAACGTACCAT+TGG + chr5_3:53537055-53537074 Msa0818070:CDS 40.0%
TTGTAATCTGTCCACTCCAA+TGG - chr5_3:53537074-53537093 None:intergenic 40.0%
! TGTCCTTGTTTGTTCCATGT+AGG + chr5_3:53537214-53537233 Msa0818070:intron 40.0%
CAACCTACATGGAACAAACA+AGG - chr5_3:53537220-53537239 None:intergenic 40.0%
AGTCTCATTCACAACCTACA+TGG - chr5_3:53537231-53537250 None:intergenic 40.0%
TAGGCTACACTATTCCAAAG+GGG + chr5_3:53537394-53537413 Msa0818070:intron 40.0%
AGTCTTTGCATCATTTCGTG+CGG + chr5_3:53537422-53537441 Msa0818070:CDS 40.0%
TTAAATCTCGTCTCTGGCAA+CGG + chr5_3:53537711-53537730 Msa0818070:intron 40.0%
ATTAGGGATTGGAGTGCAAT+CGG - chr5_3:53537739-53537758 None:intergenic 40.0%
TTGCACTCCAATCCCTAATA+TGG + chr5_3:53537740-53537759 Msa0818070:intron 40.0%
ACTCCAATCCCTAATATGGA+AGG + chr5_3:53537744-53537763 Msa0818070:intron 40.0%
CAACCTTCCATATTAGGGAT+TGG - chr5_3:53537750-53537769 None:intergenic 40.0%
ATCCCTAATATGGAAGGTTG+CGG + chr5_3:53537750-53537769 Msa0818070:intron 40.0%
GCTTAGAGTGAAAATTGCAG+AGG + chr5_3:53537886-53537905 Msa0818070:intron 40.0%
! TATATACACCGTTTGGTGGA+GGG + chr5_3:53537937-53537956 Msa0818070:CDS 40.0%
!! ACCGCATTGTAACTTGTTAC+AGG + chr5_3:53538015-53538034 Msa0818070:CDS 40.0%
! TGGTGTTTTTCCCAACAACT+AGG + chr5_3:53538164-53538183 Msa0818070:CDS 40.0%
ACTCTACGCTTCACTATGAT+AGG - chr5_3:53538205-53538224 None:intergenic 40.0%
TATCATAGTGAAGCGTAGAG+TGG + chr5_3:53538204-53538223 Msa0818070:CDS 40.0%
AGGAAAGGCGATTAATGGAG+GGG - chr5_3:53527628-53527647 None:intergenic 45.0%
GAGGAAAGGCGATTAATGGA+GGG - chr5_3:53527629-53527648 None:intergenic 45.0%
!!! TTCTGGGTTGTCGGTTTTGT+AGG - chr5_3:53527951-53527970 None:intergenic 45.0%
! GCTGGTCTATGAATGGTTCT+GGG - chr5_3:53527967-53527986 None:intergenic 45.0%
! TTCACTCGCTGGTCTATGAA+TGG - chr5_3:53527974-53527993 None:intergenic 45.0%
GGGTCAGCTGAAAAAACAGT+TGG - chr5_3:53528037-53528056 None:intergenic 45.0%
TCGGCTCATTCGGCTTAATT+TGG + chr5_3:53528249-53528268 Msa0818070:CDS 45.0%
ATTTGGATTCTTGGTCCGAC+CGG + chr5_3:53528266-53528285 Msa0818070:CDS 45.0%
CTTCCTCCATGAGTAAAACC+CGG - chr5_3:53528288-53528307 None:intergenic 45.0%
GTTAGCATAATTCAGGTGGC+AGG - chr5_3:53530929-53530948 None:intergenic 45.0%
CCAACTGAGTTAAGTTCACG+CGG + chr5_3:53531198-53531217 Msa0818070:intron 45.0%
GAACAGATAAATTGGGACGG+AGG - chr5_3:53531545-53531564 None:intergenic 45.0%
ATGGGTCAGATATTTCGGGA+CGG + chr5_3:53531740-53531759 Msa0818070:intron 45.0%
TTTGTTAACACGTGCTCCAC+GGG - chr5_3:53531849-53531868 None:intergenic 45.0%
CTTTGTTAACACGTGCTCCA+CGG - chr5_3:53531850-53531869 None:intergenic 45.0%
! AGCACAAAATTGGTGGGTAG+GGG + chr5_3:53532239-53532258 Msa0818070:intron 45.0%
AGACACACTGTACTAAGGCA+TGG - chr5_3:53532716-53532735 None:intergenic 45.0%
TCAAATTTGGGAACGTGAGG+GGG - chr5_3:53533328-53533347 None:intergenic 45.0%
!! CAGCTGATGAGTTTTGATCC+AGG + chr5_3:53533451-53533470 Msa0818070:CDS 45.0%
!! GTGAATGGACTGAGACTCTA+AGG + chr5_3:53533473-53533492 Msa0818070:CDS 45.0%
GAGTACGTTCTCGTGATTGA+AGG + chr5_3:53533499-53533518 Msa0818070:CDS 45.0%
GTACTAGAGAGGAGTGGTAA+GGG - chr5_3:53533538-53533557 None:intergenic 45.0%
GTGTTACCTTGATTGCTCTG+CGG - chr5_3:53533564-53533583 None:intergenic 45.0%
TATGTAGGCAAGAACGAAGG+TGG + chr5_3:53533741-53533760 Msa0818070:intron 45.0%
TGACATGCTAGGTGCATTGT+TGG + chr5_3:53533828-53533847 Msa0818070:CDS 45.0%
GGTAGAAGTGGTTTCATAGC+CGG - chr5_3:53533914-53533933 None:intergenic 45.0%
TGCCAATGCTAGAGGATGTT+CGG - chr5_3:53533965-53533984 None:intergenic 45.0%
! TTGAGTTGTGCCAATGCTAG+AGG - chr5_3:53533973-53533992 None:intergenic 45.0%
!! TCTAGCATTGGCACAACTCA+AGG + chr5_3:53533972-53533991 Msa0818070:CDS 45.0%
GTGGGGTAATTCTACAAGCA+TGG - chr5_3:53534197-53534216 None:intergenic 45.0%
AACCACACCACATGAACGAT+GGG - chr5_3:53534239-53534258 None:intergenic 45.0%
AAACCACACCACATGAACGA+TGG - chr5_3:53534240-53534259 None:intergenic 45.0%
CCCTACGATTTCAGGAAGAA+AGG + chr5_3:53534353-53534372 Msa0818070:intron 45.0%
ACCATCCAAGAATCGATCTC+AGG + chr5_3:53534414-53534433 Msa0818070:intron 45.0%
! ACCTGAGATCGATTCTTGGA+TGG - chr5_3:53534418-53534437 None:intergenic 45.0%
! GTGAACCTGAGATCGATTCT+TGG - chr5_3:53534422-53534441 None:intergenic 45.0%
GAAGTTCTGCAATTGGATGG+TGG - chr5_3:53534723-53534742 None:intergenic 45.0%
GAGACGAGGTGAAAGACAAA+AGG + chr5_3:53535053-53535072 Msa0818070:intron 45.0%
GACGAGGTGAAAGACAAAAG+GGG + chr5_3:53535055-53535074 Msa0818070:intron 45.0%
GGATTATGTGGGTAGGTGTT+TGG + chr5_3:53535258-53535277 Msa0818070:intron 45.0%
AATTCCTTAACTAGTGCCCC+GGG + chr5_3:53535435-53535454 Msa0818070:intron 45.0%
!! GGTTCTAAACATGCACCCTT+AGG + chr5_3:53535762-53535781 Msa0818070:intron 45.0%
ACTAAGCATGCAGTTCAAGC+CGG - chr5_3:53536404-53536423 None:intergenic 45.0%
! CGGATGATGCATACGGATTA+CGG - chr5_3:53536764-53536783 None:intergenic 45.0%
GCTATCACGGATGATGCATA+CGG - chr5_3:53536771-53536790 None:intergenic 45.0%
AGTTGCGAATTCCTTGATGC+TGG + chr5_3:53536794-53536813 Msa0818070:intron 45.0%
!!! TTGGGTTTGTCTGTTTTGGC+AGG + chr5_3:53537004-53537023 Msa0818070:intron 45.0%
! TCCACTCCAATGGTACGTTT+TGG - chr5_3:53537064-53537083 None:intergenic 45.0%
!! GCGCATCTTTGAAATGATCG+GGG - chr5_3:53537458-53537477 None:intergenic 45.0%
!! CGCGCATCTTTGAAATGATC+GGG - chr5_3:53537459-53537478 None:intergenic 45.0%
!! GCGCGCATCTTTGAAATGAT+CGG - chr5_3:53537460-53537479 None:intergenic 45.0%
TTAGGGATTGGAGTGCAATC+GGG - chr5_3:53537738-53537757 None:intergenic 45.0%
GACCGCAACCTTCCATATTA+GGG - chr5_3:53537755-53537774 None:intergenic 45.0%
TGACCGCAACCTTCCATATT+AGG - chr5_3:53537756-53537775 None:intergenic 45.0%
! GTATATACACCGTTTGGTGG+AGG + chr5_3:53537936-53537955 Msa0818070:CDS 45.0%
AACTCTGGCAAGCTCATAAC+CGG - chr5_3:53537976-53537995 None:intergenic 45.0%
! AAATACCGAGAGCACAACTC+TGG - chr5_3:53537991-53538010 None:intergenic 45.0%
TCTTCTGCGTCCTAGTTGTT+GGG - chr5_3:53538177-53538196 None:intergenic 45.0%
!!! TTTGAAATATTTTTATAAAA+CGG - chr5_3:53529153-53529172 None:intergenic 5.0%
!!! TTTTCATATTTTTTTTAAAT+AGG + chr5_3:53529899-53529918 Msa0818070:intron 5.0%
!! TATTATGAATTAATTTAAAA+CGG + chr5_3:53530169-53530188 Msa0818070:intron 5.0%
!!! TTATTATAATACTTTTTTTA+AGG + chr5_3:53530998-53531017 Msa0818070:intron 5.0%
!!! AAGATTTTTTTTTTTTTTTA+TGG - chr5_3:53534864-53534883 None:intergenic 5.0%
!!! TTATAATTTAATTTTTATTC+AGG - chr5_3:53535572-53535591 None:intergenic 5.0%
!!! TGTAAATATTTTTAAATTTA+AGG - chr5_3:53535949-53535968 None:intergenic 5.0%
!! ATTAAAAATATAATTTGAAA+AGG - chr5_3:53536054-53536073 None:intergenic 5.0%
!!! TTATATTAAAAGTATATTTT+TGG + chr5_3:53536915-53536934 Msa0818070:intron 5.0%
TAATGGAGGGGGAGAAGTGA+GGG - chr5_3:53527616-53527635 None:intergenic 50.0%
TTAATGGAGGGGGAGAAGTG+AGG - chr5_3:53527617-53527636 None:intergenic 50.0%
GGAAAGGCGATTAATGGAGG+GGG - chr5_3:53527627-53527646 None:intergenic 50.0%
CGAGGAAAGGCGATTAATGG+AGG - chr5_3:53527630-53527649 None:intergenic 50.0%
! GAGGTGATGGTTTCGAGGAA+AGG - chr5_3:53527643-53527662 None:intergenic 50.0%
! GTAGAGAGGTGATGGTTTCG+AGG - chr5_3:53527648-53527667 None:intergenic 50.0%
AGAGAGGAGTAGAGAGGTGA+TGG - chr5_3:53527656-53527675 None:intergenic 50.0%
GTAGAGAGAGAGGAGTAGAG+AGG - chr5_3:53527662-53527681 None:intergenic 50.0%
GAGAGAGAGAGTAGAGAGAG+AGG - chr5_3:53527672-53527691 None:intergenic 50.0%
TCATTCACCGGAGAACTCAC+CGG + chr5_3:53527855-53527874 Msa0818070:CDS 50.0%
AGTCTCGGACTACCCTTTGT+AGG + chr5_3:53527902-53527921 Msa0818070:CDS 50.0%
GTCTCGGACTACCCTTTGTA+GGG + chr5_3:53527903-53527922 Msa0818070:CDS 50.0%
TCTCGGACTACCCTTTGTAG+GGG + chr5_3:53527904-53527923 Msa0818070:CDS 50.0%
! CGCTGGTCTATGAATGGTTC+TGG - chr5_3:53527968-53527987 None:intergenic 50.0%
TCATAGACCAGCGAGTGAAC+CGG + chr5_3:53527975-53527994 Msa0818070:CDS 50.0%
TTTGGATTCTTGGTCCGACC+GGG + chr5_3:53528267-53528286 Msa0818070:CDS 50.0%
CTCCATGAGTAAAACCCGGT+CGG - chr5_3:53528284-53528303 None:intergenic 50.0%
ACTCATGGAGGAAGCCAAGA+AGG + chr5_3:53528294-53528313 Msa0818070:CDS 50.0%
! TATTAGGCTCTGGCTACGGT+AGG + chr5_3:53528619-53528638 Msa0818070:intron 50.0%
CAAGGCTAGTAGGTCATGCA+CGG - chr5_3:53531138-53531157 None:intergenic 50.0%
CCGCGTGAACTTAACTCAGT+TGG - chr5_3:53531201-53531220 None:intergenic 50.0%
GTCAGATATTTCGGGACGGA+GGG + chr5_3:53531744-53531763 Msa0818070:intron 50.0%
! GCACAAAATTGGTGGGTAGG+GGG + chr5_3:53532240-53532259 Msa0818070:intron 50.0%
TGCATCTTGCACGGACTTGT+TGG - chr5_3:53533128-53533147 None:intergenic 50.0%
AGAGTCTCAGTCCATTCACC+TGG - chr5_3:53533472-53533491 None:intergenic 50.0%
AGAGAGGAGTGGTAAGGGAA+GGG - chr5_3:53533533-53533552 None:intergenic 50.0%
TAGAGAGGAGTGGTAAGGGA+AGG - chr5_3:53533534-53533553 None:intergenic 50.0%
GGTACTAGAGAGGAGTGGTA+AGG - chr5_3:53533539-53533558 None:intergenic 50.0%
TACCTACCGCAGAGCAATCA+AGG + chr5_3:53533555-53533574 Msa0818070:CDS 50.0%
TACCTTGATTGCTCTGCGGT+AGG - chr5_3:53533560-53533579 None:intergenic 50.0%
TAAGTCGGTAAGTGCAGCTC+AGG + chr5_3:53533663-53533682 Msa0818070:intron 50.0%
CACCGAACATCCTCTAGCAT+TGG + chr5_3:53533960-53533979 Msa0818070:CDS 50.0%
ATGAACGATGGGGATGGACA+TGG - chr5_3:53534228-53534247 None:intergenic 50.0%
ACCACACCACATGAACGATG+GGG - chr5_3:53534238-53534257 None:intergenic 50.0%
TACTCACACCTCTCAAGGCA+TGG + chr5_3:53534570-53534589 Msa0818070:intron 50.0%
! TAGTGGATCCATGCCTTGAG+AGG - chr5_3:53534581-53534600 None:intergenic 50.0%
GGACAGAGCAACCATCAAAG+AGG + chr5_3:53535237-53535256 Msa0818070:intron 50.0%
! GTCTTGTTACTAGCGTCCCT+GGG + chr5_3:53535298-53535317 Msa0818070:intron 50.0%
TCTTGTTACTAGCGTCCCTG+GGG + chr5_3:53535299-53535318 Msa0818070:intron 50.0%
ATTCCTTAACTAGTGCCCCG+GGG + chr5_3:53535436-53535455 Msa0818070:intron 50.0%
GTTCAAGCCGGTCCACAAAT+TGG - chr5_3:53536392-53536411 None:intergenic 50.0%
! CTAGTTCTCCAAAAGAGGGC+AGG - chr5_3:53536515-53536534 None:intergenic 50.0%
CGATTTCTCATGGCACAGCA+GGG - chr5_3:53536580-53536599 None:intergenic 50.0%
ACGATTTCTCATGGCACAGC+AGG - chr5_3:53536581-53536600 None:intergenic 50.0%
TGAAAACGGCCGCGACAAAA+CGG + chr5_3:53536695-53536714 Msa0818070:intron 50.0%
!!! CTATCGATGCCGTTTTGTCG+CGG - chr5_3:53536707-53536726 None:intergenic 50.0%
GCCAAAACGTACCATTGGAG+TGG + chr5_3:53537060-53537079 Msa0818070:CDS 50.0%
GCTACACTATTCCAAAGGGG+TGG + chr5_3:53537397-53537416 Msa0818070:CDS 50.0%
GCAAAGACTTTCCACCCCTT+TGG - chr5_3:53537411-53537430 None:intergenic 50.0%
GCAGCTTCAATCCATGGAGA+TGG + chr5_3:53537478-53537497 Msa0818070:CDS 50.0%
CTTCAATCCATGGAGATGGC+AGG + chr5_3:53537482-53537501 Msa0818070:CDS 50.0%
TGGAAGGTTGCGGTCAAATG+CGG + chr5_3:53537760-53537779 Msa0818070:intron 50.0%
ACTCTGGCAAGCTCATAACC+GGG - chr5_3:53537975-53537994 None:intergenic 50.0%
CTCTTCTGCGTCCTAGTTGT+TGG - chr5_3:53538178-53538197 None:intergenic 50.0%
CAACAACTAGGACGCAGAAG+AGG + chr5_3:53538176-53538195 Msa0818070:CDS 50.0%
AGAAGTGAGGGAGAACACGG+GGG - chr5_3:53527604-53527623 None:intergenic 55.0%
GAGAAGTGAGGGAGAACACG+GGG - chr5_3:53527605-53527624 None:intergenic 55.0%
GGAGAAGTGAGGGAGAACAC+GGG - chr5_3:53527606-53527625 None:intergenic 55.0%
GGGAGAAGTGAGGGAGAACA+CGG - chr5_3:53527607-53527626 None:intergenic 55.0%
! GTCCGACCGGGTTTTACTCA+TGG + chr5_3:53528279-53528298 Msa0818070:CDS 55.0%
! CGACCGGGTTTTACTCATGG+AGG + chr5_3:53528282-53528301 Msa0818070:CDS 55.0%
TTAGCGTGCGCAAGGCTAGT+AGG - chr5_3:53531148-53531167 None:intergenic 55.0%
!! CTAGCCTTGCGCACGCTAAA+CGG + chr5_3:53531149-53531168 Msa0818070:intron 55.0%
GGTCAGATATTTCGGGACGG+AGG + chr5_3:53531743-53531762 Msa0818070:intron 55.0%
CTTATGCTAACAGGTGCCCG+TGG + chr5_3:53531830-53531849 Msa0818070:intron 55.0%
CGGTAGGTACTAGAGAGGAG+TGG - chr5_3:53533544-53533563 None:intergenic 55.0%
CTCTGCGGTAGGTACTAGAG+AGG - chr5_3:53533549-53533568 None:intergenic 55.0%
! CTAGGTGCATTGTTGGCCTC+TGG + chr5_3:53533835-53533854 Msa0818070:CDS 55.0%
GTCGGAAAAGTGGTCTCCAG+AGG - chr5_3:53533854-53533873 None:intergenic 55.0%
ATGTTGGCATTGCTCGTCGC+CGG + chr5_3:53533892-53533911 Msa0818070:CDS 55.0%
ATGGACATGGACACGGTGGT+GGG - chr5_3:53534215-53534234 None:intergenic 55.0%
GATGGGGATGGACATGGACA+CGG - chr5_3:53534222-53534241 None:intergenic 55.0%
GTCCATCCCCATCGTTCATG+TGG + chr5_3:53534229-53534248 Msa0818070:intron 55.0%
CACCACATGAACGATGGGGA+TGG - chr5_3:53534234-53534253 None:intergenic 55.0%
TCCCCATCGTTCATGTGGTG+TGG + chr5_3:53534234-53534253 Msa0818070:intron 55.0%
TAGCTATAGGGCGGGTGAAG+TGG - chr5_3:53534297-53534316 None:intergenic 55.0%
!! GGTCTTGTTACTAGCGTCCC+TGG + chr5_3:53535297-53535316 Msa0818070:intron 55.0%
GCTGCTTAACTAGTGCCCCA+GGG - chr5_3:53535317-53535336 None:intergenic 55.0%
AGCTGCTTAACTAGTGCCCC+AGG - chr5_3:53535318-53535337 None:intergenic 55.0%
TTCCTTAACTAGTGCCCCGG+GGG + chr5_3:53535437-53535456 Msa0818070:intron 55.0%
TAACTAGTGTCCAGTGCCCC+CGG - chr5_3:53535456-53535475 None:intergenic 55.0%
! GGTTTGTGCCTGCCCTCTTT+TGG + chr5_3:53536504-53536523 Msa0818070:intron 55.0%
TCTCATGGCACAGCAGGGAA+GGG - chr5_3:53536575-53536594 None:intergenic 55.0%
TTCTCATGGCACAGCAGGGA+AGG - chr5_3:53536576-53536595 None:intergenic 55.0%
ATGCGCGCAGCTTCAATCCA+TGG + chr5_3:53537472-53537491 Msa0818070:CDS 55.0%
TGAGCTACCTGCCATCTCCA+TGG - chr5_3:53537492-53537511 None:intergenic 55.0%
GCTTGCCAGAGTTGTGCTCT+CGG + chr5_3:53537983-53538002 Msa0818070:CDS 55.0%
CTTCTGCAGGAGACCAACTG+AGG - chr5_3:53538135-53538154 None:intergenic 55.0%
GAAGTGAGGGAGAACACGGG+GGG - chr5_3:53527603-53527622 None:intergenic 60.0%
TTCACCGGAGAACTCACCGG+CGG + chr5_3:53527858-53527877 Msa0818070:CDS 60.0%
AAGGGTAGTCCGAGACTCCC+CGG - chr5_3:53527899-53527918 None:intergenic 60.0%
GACCAGCGAGTGAACCGGTA+CGG + chr5_3:53527980-53527999 Msa0818070:CDS 60.0%
!! AACCGTACCGGTTCACTCGC+TGG - chr5_3:53527985-53528004 None:intergenic 60.0%
CAGCTGACCCGGAAACGAAC+CGG + chr5_3:53528047-53528066 Msa0818070:CDS 60.0%
CTACGGTAGGCGAGCTGCAT+GGG + chr5_3:53528632-53528651 Msa0818070:intron 60.0%
!! CAAGAGGTGAGGTGGTGGAC+CGG + chr5_3:53532265-53532284 Msa0818070:intron 60.0%
GGCAAGAACGAAGGTGGCAG+AGG + chr5_3:53533747-53533766 Msa0818070:intron 60.0%
TGGACATGGACACGGTGGTG+GGG - chr5_3:53534214-53534233 None:intergenic 60.0%
GATGGACATGGACACGGTGG+TGG - chr5_3:53534216-53534235 None:intergenic 60.0%
AACTAGTGTCCAGTGCCCCC+GGG - chr5_3:53535455-53535474 None:intergenic 60.0%
GTGTTTGCGGGCCAGCATCA+AGG - chr5_3:53536808-53536827 None:intergenic 60.0%
TCATAACCGGGACACAGCCG+CGG - chr5_3:53537963-53537982 None:intergenic 60.0%
ATCGCCGCCGGTGAGTTCTC+CGG - chr5_3:53527865-53527884 None:intergenic 65.0%
GCGGGAGTTTGTATCGCCGC+CGG - chr5_3:53527877-53527896 None:intergenic 65.0%
GCGGCGATACAAACTCCCGC+CGG + chr5_3:53527877-53527896 Msa0818070:CDS 65.0%
CGGCGATACAAACTCCCGCC+GGG + chr5_3:53527878-53527897 Msa0818070:CDS 65.0%
GGCGATACAAACTCCCGCCG+GGG + chr5_3:53527879-53527898 Msa0818070:CDS 65.0%
AAACTCCCGCCGGGGAGTCT+CGG + chr5_3:53527887-53527906 Msa0818070:CDS 65.0%
GCTACGGTAGGCGAGCTGCA+TGG + chr5_3:53528631-53528650 Msa0818070:intron 65.0%
GGGGATGGACATGGACACGG+TGG - chr5_3:53534219-53534238 None:intergenic 65.0%
ATAGGGCGGGTGAAGTGGCG+AGG - chr5_3:53534292-53534311 None:intergenic 65.0%
! TGCCCCCGGGGCACTAGTTA+AGG - chr5_3:53535442-53535461 None:intergenic 65.0%
ACTAGTGTCCAGTGCCCCCG+GGG - chr5_3:53535454-53535473 None:intergenic 65.0%
GTAGTCCGAGACTCCCCGGC+GGG - chr5_3:53527895-53527914 None:intergenic 70.0%
GGTAGTCCGAGACTCCCCGG+CGG - chr5_3:53527896-53527915 None:intergenic 70.0%
GGCGCCGTTTAGCGTGCGCA+AGG - chr5_3:53531156-53531175 None:intergenic 70.0%
! TGGTGGGTAGGGGGCGCAAG+AGG + chr5_3:53532249-53532268 Msa0818070:intron 70.0%
! GGTAGGGGGCGCAAGAGGTG+AGG + chr5_3:53532254-53532273 Msa0818070:intron 70.0%
! AGGGGGCGCAAGAGGTGAGG+TGG + chr5_3:53532257-53532276 Msa0818070:intron 70.0%
GGGCGCAAGAGGTGAGGTGG+TGG + chr5_3:53532260-53532279 Msa0818070:intron 70.0%
! AACTAGTGCCCCGGGGGCAC+TGG + chr5_3:53535443-53535462 Msa0818070:intron 70.0%
! CACCGTTTGGTGGAGGGCCG+CGG + chr5_3:53537943-53537962 Msa0818070:CDS 70.0%
AGCCGCGGCCCTCCACCAAA+CGG - chr5_3:53537948-53537967 None:intergenic 70.0%
! GGAGGGCCGCGGCTGTGTCC+CGG + chr5_3:53537954-53537973 Msa0818070:CDS 80.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 53527553 53538429 53527553 ID=Msa0818070;Name=Msa0818070
chr5_3 mRNA 53527553 53538429 53527553 ID=Msa0818070-mRNA-1;Parent=Msa0818070;Name=Msa0818070-mRNA-1;_AED=0.08;_eAED=0.08;_QI=256|1|1|1|1|1|8|183|472
chr5_3 exon 53527553 53528315 53527553 ID=Msa0818070-mRNA-1:exon:16115;Parent=Msa0818070-mRNA-1
chr5_3 exon 53533427 53533576 53533427 ID=Msa0818070-mRNA-1:exon:16116;Parent=Msa0818070-mRNA-1
chr5_3 exon 53533748 53533993 53533748 ID=Msa0818070-mRNA-1:exon:16117;Parent=Msa0818070-mRNA-1
chr5_3 exon 53537026 53537115 53537026 ID=Msa0818070-mRNA-1:exon:16118;Parent=Msa0818070-mRNA-1
chr5_3 exon 53537236 53537314 53537236 ID=Msa0818070-mRNA-1:exon:16119;Parent=Msa0818070-mRNA-1
chr5_3 exon 53537397 53537503 53537397 ID=Msa0818070-mRNA-1:exon:16120;Parent=Msa0818070-mRNA-1
chr5_3 exon 53537906 53538036 53537906 ID=Msa0818070-mRNA-1:exon:16121;Parent=Msa0818070-mRNA-1
chr5_3 exon 53538138 53538429 53538138 ID=Msa0818070-mRNA-1:exon:16122;Parent=Msa0818070-mRNA-1
chr5_3 five_prime_UTR 53527553 53527808 53527553 ID=Msa0818070-mRNA-1:five_prime_utr;Parent=Msa0818070-mRNA-1
chr5_3 CDS 53527809 53528315 53527809 ID=Msa0818070-mRNA-1:cds;Parent=Msa0818070-mRNA-1
chr5_3 CDS 53533427 53533576 53533427 ID=Msa0818070-mRNA-1:cds;Parent=Msa0818070-mRNA-1
chr5_3 CDS 53533748 53533993 53533748 ID=Msa0818070-mRNA-1:cds;Parent=Msa0818070-mRNA-1
chr5_3 CDS 53537026 53537115 53537026 ID=Msa0818070-mRNA-1:cds;Parent=Msa0818070-mRNA-1
chr5_3 CDS 53537236 53537314 53537236 ID=Msa0818070-mRNA-1:cds;Parent=Msa0818070-mRNA-1
chr5_3 CDS 53537397 53537503 53537397 ID=Msa0818070-mRNA-1:cds;Parent=Msa0818070-mRNA-1
chr5_3 CDS 53537906 53538036 53537906 ID=Msa0818070-mRNA-1:cds;Parent=Msa0818070-mRNA-1
chr5_3 CDS 53538138 53538246 53538138 ID=Msa0818070-mRNA-1:cds;Parent=Msa0818070-mRNA-1
chr5_3 three_prime_UTR 53538247 53538429 53538247 ID=Msa0818070-mRNA-1:three_prime_utr;Parent=Msa0818070-mRNA-1
Gene Sequence

>Msa0818070

ATGGCAACTATACTCTTTTTTGTTATCATCTTCACCATCTTTTTTCTCATTCACCGGAGAACTCACCGGCGGCGATACAAACTCCCGCCGGGGAGTCTCGGACTACCCTTTGTAGGGGAAACTATGCAACTAATATCAGCCTACAAAACCGACAACCCAGAACCATTCATAGACCAGCGAGTGAACCGGTACGGTTCAATCTTCACTACTCACGTTTTCGGTGAACCAACTGTTTTTTCAGCTGACCCGGAAACGAACCGGTTTATTTTAATGAATGAAGGGAAACTTTTTGAATGTAGTTACCCCGGTTCAATATCGAACCTTTTGGGAAAACACTCTTTGCTTCTTATGAAAGGTTCACTTCATAAAAGAATGCATTCACTTACTATGAGTTTTGCTAACTCCTCAATTATTAAGGATCATCTTCTTCTTGATATTGATCGGCTCATTCGGCTTAATTTGGATTCTTGGTCCGACCGGGTTTTACTCATGGAGGAAGCCAAGAAGATAACGTTTGAGTTGACAGTGAAGCAGCTGATGAGTTTTGATCCAGGTGAATGGACTGAGACTCTAAGGAAAGAGTACGTTCTCGTGATTGAAGGATTTTTCACCCTTCCCTTACCACTCCTCTCTAGTACCTACCGCAGAGCAATCAAGGCAAGAACGAAGGTGGCAGAGGAATTAACATTGATTGTGAGGCAAAGAAGAAAAGAATGTGTAATGGGGGAGACAAAAACTGACATGCTAGGTGCATTGTTGGCCTCTGGAGACCACTTTTCCGACCAACAAATAGTCGATTTCATGTTGGCATTGCTCGTCGCCGGCTATGAAACCACTTCTACCATAATGACATTCGCGATCAAGTTTCTCACCGAACATCCTCTAGCATTGGCACAACTCAAGGAAGAGCATGACCAAATCAGAGCAAAGAAAAGTTGCCAAAACGTACCATTGGAGTGGACAGATTACAAGTCAATGCAATTTACTCAATGTGTTGTGAATGAGACTTTAAGGATGGCAAACATAATTAGTGGGATATTTAGGAGAGCAATGACAGACATCAATATCAAAGGCTACACTATTCCAAAGGGGTGGAAAGTCTTTGCATCATTTCGTGCGGTACATCTAAACCCCGATCATTTCAAAGATGCGCGCAGCTTCAATCCATGGAGATGGCAGAGGAAATCAGAAGCAACAAGCCCTGCAAATGTATATACACCGTTTGGTGGAGGGCCGCGGCTGTGTCCCGGTTATGAGCTTGCCAGAGTTGTGCTCTCGGTATTTCTTCACCGCATTGTAACTTGTTACAGTTGGTCTCCTGCAGAAGAAGATAAATTGGTGTTTTTCCCAACAACTAGGACGCAGAAGAGGTATCCTATCATAGTGAAGCGTAGAGTGGAATCCAAATTATGTAATTAA
Protein sequence

>Msa0818070

MATILFFVIIFTIFFLIHRRTHRRRYKLPPGSLGLPFVGETMQLISAYKTDNPEPFIDQRVNRYGSIFTTHVFGEPTVFSADPETNRFILMNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIKDHLLLDIDRLIRLNLDSWSDRVLLMEEAKKITFELTVKQLMSFDPGEWTETLRKEYVLVIEGFFTLPLPLLSSTYRRAIKARTKVAEELTLIVRQRRKECVMGETKTDMLGALLASGDHFSDQQIVDFMLALLVAGYETTSTIMTFAIKFLTEHPLALAQLKEEHDQIRAKKSCQNVPLEWTDYKSMQFTQCVVNETLRMANIISGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNPDHFKDARSFNPWRWQRKSEATSPANVYTPFGGGPRLCPGYELARVVLSVFLHRIVTCYSWSPAEEDKLVFFPTTRTQKRYPIIVKRRVESKLCN*