AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0005500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0005500 MtrunA17_Chr1g0150471 94.953 317 15 1 1 317 1 316 0.0 625
Msa0005500 MtrunA17_Chr3g0136701 54.462 325 105 8 1 317 1 290 1.16e-100 297
Msa0005500 MtrunA17_Chr4g0072871 46.089 358 145 7 4 316 20 374 1.29e-94 285
Msa0005500 MtrunA17_Chr7g0220721 62.500 88 33 0 4 91 24 111 3.25e-35 131
Msa0005500 MtrunA17_Chr7g0220721 69.014 71 14 1 254 316 325 395 2.74e-23 99.0
Msa0005500 MtrunA17_Chr1g0155811 46.392 97 42 1 6 92 5 101 8.19e-23 95.5
Msa0005500 MtrunA17_Chr5g0429341 37.692 130 76 2 5 131 4 131 4.35e-21 92.8
Msa0005500 MtrunA17_Chr5g0405151 44.565 92 41 2 5 88 4 93 2.61e-19 84.0
Msa0005500 MtrunA17_Chr4g0035651 43.299 97 45 1 6 92 5 101 4.97e-19 84.3
Msa0005500 MtrunA17_Chr2g0314671 41.667 96 47 1 6 92 5 100 2.17e-18 84.0
Msa0005500 MtrunA17_Chr4g0033641 42.391 92 44 1 6 88 5 96 3.73e-18 82.0
Msa0005500 MtrunA17_Chr3g0120711 37.500 104 64 1 5 108 4 106 4.35e-18 84.3
Msa0005500 MtrunA17_Chr3g0145061 41.237 97 47 1 6 92 5 101 1.28e-17 80.5
Msa0005500 MtrunA17_Chr7g0268691 39.326 89 53 1 6 94 20 107 5.28e-17 80.9
Msa0005500 MtrunA17_Chr3g0142221 37.864 103 53 1 6 97 5 107 1.84e-16 77.0
Msa0005500 MtrunA17_Chr2g0329511 40.217 92 46 1 6 88 5 96 5.31e-16 76.3
Msa0005500 MtrunA17_Chr7g0251781 38.710 93 52 1 6 98 5 92 1.27e-14 73.9
Msa0005500 MtrunA17_Chr2g0322941 39.560 91 52 1 5 95 43 130 1.73e-13 68.9
Msa0005500 MtrunA17_Chr1g0209861 47.561 82 36 2 222 301 351 427 8.39e-13 68.6
Msa0005500 MtrunA17_Chr1g0209071 36.486 74 47 0 4 77 3 76 9.69e-13 68.2
Msa0005500 MtrunA17_Chr8g0390971 70.455 44 13 0 256 299 358 401 2.23e-12 67.4
Msa0005500 MtrunA17_Chr5g0431351 60.377 53 18 1 249 298 164 216 2.38e-11 62.4
Msa0005500 MtrunA17_Chr2g0327621 42.188 64 37 0 245 308 144 207 3.95e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0005500 AT5G24930.1 54.000 350 104 14 1 302 1 341 1.77e-97 292
Msa0005500 AT2G24790.1 53.074 309 104 11 2 304 4 277 2.22e-94 282
Msa0005500 AT3G02380.1 42.899 338 163 7 4 316 14 346 2.02e-82 253
Msa0005500 AT5G57660.1 43.391 348 153 10 2 316 18 354 7.10e-74 231
Msa0005500 AT5G15850.1 40.230 348 166 9 6 316 12 354 6.53e-70 221
Msa0005500 AT5G15840.1 38.843 363 160 13 6 316 20 372 3.08e-69 220
Msa0005500 AT2G24790.2 50.237 211 75 7 2 208 4 188 4.64e-58 186
Msa0005500 AT5G15840.2 44.681 141 54 3 6 126 20 156 1.43e-34 127
Msa0005500 AT4G15250.1 27.596 337 181 11 6 300 5 320 1.75e-21 93.6
Msa0005500 AT2G21320.1 44.211 95 43 2 5 91 4 96 4.03e-19 83.6
Msa0005500 AT4G38960.1 43.158 95 44 2 5 91 4 96 7.61e-19 83.2
Msa0005500 AT4G38960.6 43.158 95 44 2 5 91 4 96 7.61e-19 83.2
Msa0005500 AT1G78600.1 42.708 96 46 1 6 92 5 100 1.14e-18 85.1
Msa0005500 AT1G78600.2 42.708 96 46 1 6 92 5 100 1.75e-18 84.7
Msa0005500 AT1G75540.1 40.404 99 47 1 6 92 5 103 8.41e-18 83.2
Msa0005500 AT2G47890.1 40.659 91 52 1 4 94 11 99 1.45e-17 82.4
Msa0005500 AT2G47890.1 56.000 50 22 0 251 300 282 331 2.04e-11 64.3
Msa0005500 AT2G47890.3 40.659 91 52 1 4 94 11 99 1.51e-17 82.0
Msa0005500 AT2G47890.2 40.659 91 52 1 4 94 11 99 2.41e-17 80.1
Msa0005500 AT2G33500.1 40.449 89 53 0 6 94 12 100 3.44e-17 82.0
Msa0005500 AT2G33500.2 40.449 89 53 0 6 94 12 100 3.76e-17 81.6
Msa0005500 AT1G06040.1 43.478 92 43 1 6 88 5 96 1.02e-16 78.6
Msa0005500 AT1G28050.1 40.449 89 53 0 6 94 9 97 1.56e-16 80.1
Msa0005500 AT5G48250.1 42.667 75 43 0 5 79 4 78 1.66e-16 79.7
Msa0005500 AT1G06040.2 43.478 92 43 1 6 88 5 96 1.79e-16 76.3
Msa0005500 AT2G31380.1 30.481 187 97 4 6 164 5 186 1.30e-15 75.5
Msa0005500 AT3G07650.3 42.466 73 42 0 5 77 4 76 1.80e-15 76.6
Msa0005500 AT3G07650.2 42.466 73 42 0 5 77 4 76 1.80e-15 76.6
Msa0005500 AT3G07650.4 42.466 73 42 0 5 77 4 76 1.80e-15 76.6
Msa0005500 AT3G07650.1 42.466 73 42 0 5 77 4 76 1.80e-15 76.6
Msa0005500 AT4G39070.1 38.776 98 50 1 5 92 4 101 1.71e-14 72.4
Msa0005500 AT1G68190.1 36.264 91 56 1 4 94 12 100 5.03e-14 72.4
Msa0005500 AT1G68190.3 36.264 91 56 1 4 94 12 100 5.03e-14 72.4
Msa0005500 AT1G68190.2 38.961 77 47 0 4 80 41 117 5.97e-14 72.4
Msa0005500 AT4G10240.1 36.275 102 46 2 6 92 5 102 1.59e-13 67.8
Msa0005500 AT1G49130.1 53.968 63 29 0 237 299 259 321 1.86e-13 70.5
Msa0005500 AT1G49130.2 53.968 63 29 0 237 299 252 314 2.03e-13 70.1
Msa0005500 AT3G21880.3 36.364 88 46 1 6 83 9 96 5.83e-13 69.3
Msa0005500 AT3G21880.2 36.364 88 46 1 6 83 9 96 5.83e-13 69.3
Msa0005500 AT3G21880.1 36.364 88 46 1 6 83 5 92 5.83e-13 69.3
Msa0005500 AT1G68520.1 66.667 48 16 0 256 303 357 404 6.95e-13 69.3
Msa0005500 AT1G73870.1 68.085 47 15 0 255 301 344 390 1.51e-12 68.2
Msa0005500 AT1G25440.1 72.093 43 12 0 256 298 361 403 3.96e-12 67.0
Msa0005500 AT5G41380.1 52.000 50 24 0 252 301 211 260 8.72e-11 62.4
Msa0005500 AT5G14370.1 64.444 45 16 0 256 300 294 338 9.87e-11 62.4

Find 215 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATTTCATATTCAAATT+TGG 0.059274 1_1:+8161218 None:intergenic
AGACATTTACTTTGAAATTT+AGG 0.088666 1_1:+8165439 Msa0005510:intron
TAATTGAGATCAGGGAATTT+AGG 0.162993 1_1:+8164807 Msa0005510:intron
GACATTTACTTTGAAATTTA+GGG 0.205658 1_1:+8165440 Msa0005510:intron
AGCAGCTGCGTCGGCTTTGC+AGG 0.207136 1_1:+8165022 Msa0005510:intron
TCATATTGTAAATATAAAAT+TGG 0.216283 1_1:-8161027 Msa0005500:three_prime_UTR
GCGAACCTTCCTTTAATTCT+AGG 0.234127 1_1:+8164232 None:intergenic
GAAACTAGACCTAGAATTAA+AGG 0.239849 1_1:-8164241 Msa0005500:CDS
TCAATTTCATATTCAAATTT+GGG 0.242687 1_1:+8161219 None:intergenic
CACATTAAGGGGAAGAAAAT+TGG 0.253571 1_1:+8163497 None:intergenic
GAATGTGTGGTTGTGGTGAT+TGG 0.270371 1_1:+8165333 Msa0005510:intron
ATTTAGGGTTTGAAGGAGTT+TGG 0.272290 1_1:+8164823 Msa0005510:intron
GGGTCGAAGTACACTATAAA+AGG 0.277657 1_1:+8161240 None:intergenic
AATTGAGATCAGGGAATTTA+GGG 0.282604 1_1:+8164808 Msa0005510:intron
AATTTCAAAGTAAATGTCTT+TGG 0.284553 1_1:-8165435 Msa0005500:five_prime_UTR
AATGTGTGGTTGTGGTGATT+GGG 0.291161 1_1:+8165334 Msa0005510:intron
TGGGGTAAAGTATCACTATT+TGG 0.293723 1_1:+8165353 Msa0005510:intron
AGATCAAAGAGAACACATTA+AGG 0.305008 1_1:+8163484 None:intergenic
TTTCCAGATTGTGAAAATAA+AGG 0.307166 1_1:-8160989 Msa0005500:three_prime_UTR
ATTGGGTGATTATTTAATAT+TGG 0.309949 1_1:-8163331 Msa0005500:three_prime_UTR
AGTGCCACCGTTCCACTTTC+AGG 0.313741 1_1:-8163681 Msa0005500:three_prime_UTR
GTGACGAAATCGTCAATTTC+GGG 0.319268 1_1:+8164768 Msa0005510:intron
TGAATTTGAAGAAGAGGATT+TGG 0.319326 1_1:-8163260 Msa0005500:three_prime_UTR
TGTTGCTTTGGATGACTTGC+AGG 0.340517 1_1:+8165178 Msa0005510:intron
TCGTCTGTAGCCAATGTTAT+AGG 0.345851 1_1:+8161555 None:intergenic
CAATATGTAGTTTACCTCTA+TGG 0.348551 1_1:+8163600 None:intergenic
TCTATAACTACATTTGAATA+TGG 0.348662 1_1:-8162484 Msa0005500:three_prime_UTR
GTTAACACATGGTATCGTTT+TGG 0.351051 1_1:+8163286 None:intergenic
AATATTCATGCAAACAATAA+AGG 0.353795 1_1:-8161456 Msa0005500:three_prime_UTR
AAGAAGCAGAAGCTGCTTCC+TGG 0.355450 1_1:-8164851 Msa0005500:CDS
TGAAGAAGAGGATTTGGTTA+TGG 0.363993 1_1:-8163254 Msa0005500:three_prime_UTR
TCAGGGAATTTAGGGTTTGA+AGG 0.367060 1_1:+8164816 Msa0005510:intron
AGTGACGAAATCGTCAATTT+CGG 0.368521 1_1:+8164767 Msa0005510:intron
GACGCCATCTGCGGTGGTGC+CGG 0.374473 1_1:+8164707 Msa0005510:intron
CACCGCAGATGGCGTCGTTC+CGG 0.376246 1_1:-8164700 Msa0005500:CDS
GGAAGCAGCTTCTGCTTCTT+CGG 0.381583 1_1:+8164854 Msa0005510:intron
ACCAAGACATCACCTTGATT+TGG 0.383592 1_1:+8162457 None:intergenic
CAATTCAATAAACAACAAAA+TGG 0.385236 1_1:-8165219 Msa0005500:exon
GTGGCGGGAGGCGAGTTTGT+TGG 0.388480 1_1:+8165094 Msa0005510:intron
TTGTAGGAGTTGAATGTTAG+TGG 0.393382 1_1:-8162203 Msa0005500:three_prime_UTR
GTTGTTGTTGTGGTGGTGGA+AGG 0.394821 1_1:+8164923 Msa0005510:intron
AACTTCATGCATAGTTCAAC+AGG 0.396116 1_1:+8164150 None:intergenic
GAGTGTGACGCGGTGGTGGC+GGG 0.403622 1_1:+8165079 Msa0005510:intron
ATTTATTGTCGTGGCTGTTT+TGG 0.406362 1_1:-8162275 Msa0005500:three_prime_UTR
TAGTGAGAGTAATTGAGATC+AGG 0.412297 1_1:+8164798 Msa0005510:intron
ACGGCAGAATAGTGTTGCTT+TGG 0.415438 1_1:+8165166 Msa0005510:intron
CAGAGAAGAATGATTGTTGT+TGG 0.418301 1_1:+8164898 Msa0005510:intron
TTCACTTCGATTAGAAAGAA+AGG 0.418594 1_1:-8164129 Msa0005500:three_prime_UTR
AGCTTCTGCTTCTTCGGTGG+TGG 0.425885 1_1:+8164860 Msa0005510:intron
GGCTGTTGTTGTTGTGGTGG+TGG 0.426525 1_1:+8164919 Msa0005510:intron
CCGTCTCTGTCGCCGTCGTT+TGG 0.426542 1_1:+8164392 None:intergenic
TACTTTGAAATTTAGGGATA+GGG 0.427212 1_1:+8165446 Msa0005510:intron
ACGCCATCTGCGGTGGTGCC+GGG 0.428709 1_1:+8164708 Msa0005510:intron
TCATGTTCATCTAGACTATC+GGG 0.429027 1_1:-8161677 Msa0005500:three_prime_UTR
AGAGTGTGACGCGGTGGTGG+CGG 0.429623 1_1:+8165078 Msa0005510:intron
AGTGAGAGTAATTGAGATCA+GGG 0.433298 1_1:+8164799 Msa0005510:intron
AGACGACCAACTTTGCGAAA+TGG 0.434369 1_1:-8161538 Msa0005500:three_prime_UTR
CGTCTGTAGCCAATGTTATA+GGG 0.434662 1_1:+8161556 None:intergenic
ATGTGTGGTTGTGGTGATTG+GGG 0.434776 1_1:+8165335 Msa0005510:intron
TATCACTATTTGGTGGGGTA+GGG 0.436801 1_1:+8165363 Msa0005510:intron
TGGAACGGTGGCACTGCATA+AGG 0.437257 1_1:+8163689 None:intergenic
TTACTTTGAAATTTAGGGAT+AGG 0.437945 1_1:+8165445 Msa0005510:intron
AAAGTAAATGTCTTTGGCTA+AGG 0.439439 1_1:-8165429 Msa0005500:five_prime_UTR
TCCGTCATCACGTTTCCGTC+TGG 0.440194 1_1:+8164433 None:intergenic
CGTTCGTGGCGGCGAGCTAG+TGG 0.441707 1_1:+8164960 Msa0005510:intron
GTATCACTATTTGGTGGGGT+AGG 0.441747 1_1:+8165362 Msa0005510:intron
GCCTATCCATTTCGCAAAGT+TGG 0.442229 1_1:+8161532 None:intergenic
CTTCTTGCCTTCACTATGAA+TGG 0.443301 1_1:-8162407 Msa0005500:three_prime_UTR
GTGGTCAACAATTGTCTAGA+TGG 0.446987 1_1:+8161149 None:intergenic
ATCGGAACCGCCACCGTCAT+CGG 0.447848 1_1:+8164367 None:intergenic
TCAAGGTGATGTCTTGGTAT+TGG 0.449194 1_1:-8162452 Msa0005500:three_prime_UTR
CACGACACCAAATCACAGAT+TGG 0.455020 1_1:-8163630 Msa0005500:three_prime_UTR
GACATTCTCCTCAGGGAAGA+AGG 0.455681 1_1:-8161610 Msa0005500:three_prime_UTR
GATCAAAGAGAACACATTAA+GGG 0.461834 1_1:+8163485 None:intergenic
CCGGAGCTTGTTCACAGACT+TGG 0.464846 1_1:+8165054 Msa0005510:intron
TTAGGTATCTTCGCCGTCGA+TGG 0.464857 1_1:-8164470 Msa0005500:intron
AGGATTATCATTGGTAGCTA+TGG 0.466229 1_1:-8161284 Msa0005500:three_prime_UTR
TGAAAGTCATTCTAAACAGT+TGG 0.466780 1_1:+8161047 None:intergenic
AACAATAAAGGACTTGATGC+TGG 0.467302 1_1:-8161444 Msa0005500:three_prime_UTR
TGGTGGTGGAAGGTGGTGAG+AGG 0.469506 1_1:+8164933 Msa0005510:intron
TCTCTTTCCACCGCCGTCAT+CGG 0.470887 1_1:+8164349 None:intergenic
AACTTATGAATTTGAAGAAG+AGG 0.473125 1_1:-8163266 Msa0005500:three_prime_UTR
GAGTGTAGAAGAGGAGAGGA+GGG 0.474017 1_1:+8165311 Msa0005510:intron
GCTTTGCAGGTGACGTGAGC+CGG 0.474575 1_1:+8165035 Msa0005510:intron
GGCGGTTCCGATGACGGCGG+TGG 0.476197 1_1:-8164356 Msa0005500:CDS
TTCATGTTCATCTAGACTAT+CGG 0.476826 1_1:-8161678 Msa0005500:three_prime_UTR
ATCACTATTTGGTGGGGTAG+GGG 0.482413 1_1:+8165364 Msa0005510:intron
GAAAGTCATTCTAAACAGTT+GGG 0.482449 1_1:+8161048 None:intergenic
AGGAGGCCCAATCTGTGATT+TGG 0.482759 1_1:+8163623 None:intergenic
GACGGTGGCGGTTCCGATGA+CGG 0.482863 1_1:-8164362 Msa0005500:CDS
GTTCCACTTTCAGGTCTTGA+CGG 0.483511 1_1:-8163672 Msa0005500:three_prime_UTR
TGCAGCTAGACATTCTCCTC+AGG 0.486928 1_1:-8161618 Msa0005500:three_prime_UTR
TTGGATTGGGAGTGTAGAAG+AGG 0.490072 1_1:+8165302 Msa0005510:intron
TTCCACTTTCAGGTCTTGAC+GGG 0.491106 1_1:-8163671 Msa0005500:three_prime_UTR
AGAGAGTTGCAGAGTGGTTG+CGG 0.493174 1_1:+8163719 None:intergenic
TTAATTGCAGAGGATGAATA+CGG 0.494889 1_1:-8164184 Msa0005500:CDS
AGTGGTTGCGGCGAGAATGA+AGG 0.499956 1_1:+8163731 None:intergenic
GGTGTTGGACCCTATAACAT+TGG 0.501151 1_1:-8161565 Msa0005500:three_prime_UTR
TGTAGGAGTTGAATGTTAGT+GGG 0.501526 1_1:-8162202 Msa0005500:three_prime_UTR
ATTTAATATTGGAAATGAGA+TGG 0.502072 1_1:-8163320 Msa0005500:three_prime_UTR
TGAAGGAGTTTGGAGAAGCC+AGG 0.505414 1_1:+8164833 Msa0005510:intron
GGCAGAGTGTGACGCGGTGG+TGG 0.506125 1_1:+8165075 Msa0005510:intron
AAAGTTTGAACTTACTGCCA+TGG 0.508354 1_1:+8163220 None:intergenic
GTAGTGTTCGTGTTCGTGTT+CGG 0.509358 1_1:+8164653 Msa0005510:intron
GTTGTTGTGGTGGTGGAAGG+TGG 0.511007 1_1:+8164926 Msa0005510:intron
ATGAATGGTGTTGGAACTCA+AGG 0.511912 1_1:-8162392 Msa0005500:three_prime_UTR
GGAGTGTAGAAGAGGAGAGG+AGG 0.513691 1_1:+8165310 Msa0005510:intron
GACGGGCAACGCAAATTGAA+TGG 0.513772 1_1:-8163654 Msa0005500:three_prime_UTR
TGGTGAGAGGGACACGTTCG+TGG 0.516914 1_1:+8164946 Msa0005510:intron
GTTGGCTGTTGTTGTTGTGG+TGG 0.517079 1_1:+8164916 Msa0005510:intron
GTGGTTGCGGCGAGAATGAA+GGG 0.520289 1_1:+8163732 None:intergenic
ACGACACCAAATCACAGATT+GGG 0.521168 1_1:-8163629 Msa0005500:three_prime_UTR
GCCTTCACTATGAATGGTGT+TGG 0.521565 1_1:-8162401 Msa0005500:three_prime_UTR
AGTTCAGACGATATTGAGTA+AGG 0.523623 1_1:-8161420 Msa0005500:three_prime_UTR
AGGGATGCAAGGACAGAAAG+AGG 0.524843 1_1:+8165465 Msa0005510:intron
TTTAGGAAGTATTTATGGAG+TGG 0.525133 1_1:-8163430 Msa0005500:three_prime_UTR
GGTATCTTCGCCGTCGATGG+AGG 0.526645 1_1:-8164467 Msa0005500:CDS
TCACTTCGATTAGAAAGAAA+GGG 0.527132 1_1:-8164128 Msa0005500:intron
ACAGAGCAAAGGATTATCAT+TGG 0.528127 1_1:-8161293 Msa0005500:three_prime_UTR
ATCTTGAGAGTAGCTAATTG+AGG 0.529014 1_1:+8165389 Msa0005510:intron
AGAGGAGAGGAGGGAATGTG+TGG 0.529036 1_1:+8165320 Msa0005510:intron
ACCAAATCAAGGTGATGTCT+TGG 0.532557 1_1:-8162458 Msa0005500:three_prime_UTR
TGAGAGTGTTGTGAGTGTGT+TGG 0.533685 1_1:+8165266 Msa0005510:intron
GAATATGGTGGACCAAATCA+AGG 0.534126 1_1:-8162469 Msa0005500:three_prime_UTR
CCAAGTCTGTGAACAAGCTC+CGG 0.534270 1_1:-8165054 Msa0005500:CDS
AAATATGAATTTAATTGCAG+AGG 0.534945 1_1:-8164194 Msa0005500:CDS
TTCGTGTTCGTGTTCGGTGG+TGG 0.536195 1_1:+8164659 Msa0005510:intron
AATCTAAAATTTGAAACCGA+AGG 0.539870 1_1:+8163551 None:intergenic
TTTGGGCTTATCATGGTGGA+GGG 0.541506 1_1:-8162350 Msa0005500:three_prime_UTR
GTAGGAGTTGAATGTTAGTG+GGG 0.541828 1_1:-8162201 Msa0005500:three_prime_UTR
AGTCCCGGCACCACCGCAGA+TGG 0.542153 1_1:-8164711 Msa0005500:CDS
CGGCGGTGGAAAGAGAAGCT+AGG 0.543681 1_1:-8164342 Msa0005500:CDS
TCTTGAGAGTAGCTAATTGA+GGG 0.545062 1_1:+8165390 Msa0005510:intron
AAAGAGAAGCTAGGGTTTCG+AGG 0.545550 1_1:-8164333 Msa0005500:CDS
GTTCGTGGCGGCGAGCTAGT+GGG 0.545982 1_1:+8164961 Msa0005510:intron
GAGGAGGGAATGTGTGGTTG+TGG 0.546672 1_1:+8165326 Msa0005510:intron
GTTGTTGGCTGTTGTTGTTG+TGG 0.546859 1_1:+8164913 Msa0005510:intron
GGTGGTGGAAGGTGGTGAGA+GGG 0.548296 1_1:+8164934 Msa0005510:intron
AGGCGAGTTTGTTGGCAGCA+TGG 0.549459 1_1:+8165102 Msa0005510:intron
AGAGTGGATGTCATGATCAC+AGG 0.550527 1_1:+8164989 Msa0005510:intron
TCTTCGCCGTCGATGGAGGT+TGG 0.551535 1_1:-8164463 Msa0005500:CDS
GTAAAGTATCACTATTTGGT+GGG 0.551859 1_1:+8165357 Msa0005510:intron
AATATTGGAAATGAGATGGA+TGG 0.552754 1_1:-8163316 Msa0005500:three_prime_UTR
ACGCCGGAGCAAAACAGTCC+CGG 0.553478 1_1:-8164726 Msa0005500:CDS
CGGAACGACGCCATCTGCGG+TGG 0.553872 1_1:+8164701 Msa0005510:intron
AGCAGCTTCTGCTTCTTCGG+TGG 0.557435 1_1:+8164857 Msa0005510:intron
ACATTCTCCTCAGGGAAGAA+GGG 0.558236 1_1:-8161609 Msa0005500:three_prime_UTR
GGCGGTGGAAAGAGAAGCTA+GGG 0.558883 1_1:-8164341 Msa0005500:CDS
TGGGAAAACAATAAAGTACA+TGG 0.558889 1_1:+8161067 None:intergenic
TTGGGAGTGTAGAAGAGGAG+AGG 0.559292 1_1:+8165307 Msa0005510:intron
GACGGCGCCGATGACGGTGG+CGG 0.560155 1_1:-8164374 Msa0005500:CDS
TAGGAGTTGAATGTTAGTGG+GGG 0.566327 1_1:-8162200 Msa0005500:three_prime_UTR
CTTTGGCTAAGGCTCACCCA+CGG 0.568239 1_1:-8165418 Msa0005500:five_prime_UTR
GCCGTTGTGATTTATTGTCG+TGG 0.570076 1_1:-8162284 Msa0005500:three_prime_UTR
TTTGGCTAAGGCTCACCCAC+GGG 0.570733 1_1:-8165417 Msa0005500:five_prime_UTR
TGCCCGTCAAGACCTGAAAG+TGG 0.572322 1_1:+8163669 None:intergenic
ACCAGACGGAAACGTGATGA+CGG 0.572547 1_1:-8164434 Msa0005500:CDS
TCATTGGTAGCTATGGACAT+TGG 0.573276 1_1:-8161277 Msa0005500:three_prime_UTR
CAATTTCATATTCAAATTTG+GGG 0.573664 1_1:+8161220 None:intergenic
ATAACTACATTTGAATATGG+TGG 0.573760 1_1:-8162481 Msa0005500:three_prime_UTR
TGGTCAACAATTGTCTAGAT+GGG 0.576877 1_1:+8161150 None:intergenic
TGATTGAAATTGTAAGTGAA+AGG 0.578430 1_1:+8164597 Msa0005510:intron
GTAGTTTACCTCTATGGAGG+AGG 0.580133 1_1:+8163606 None:intergenic
TGTGACGCGGTGGTGGCGGG+AGG 0.581988 1_1:+8165082 Msa0005510:intron
AAATGACGGTTAAGTGGTGT+TGG 0.586630 1_1:-8161580 Msa0005500:three_prime_UTR
TTTGTTGGCAGCATGGATGT+TGG 0.587996 1_1:+8165109 Msa0005510:intron
CACCGGAACGACGCCATCTG+CGG 0.589463 1_1:+8164698 Msa0005510:intron
CAAATTCATAAGTTAACACA+TGG 0.591019 1_1:+8163275 None:intergenic
ACCAACTTTGCGAAATGGAT+AGG 0.592428 1_1:-8161533 Msa0005500:three_prime_UTR
TCCAACACCATTCATAGTGA+AGG 0.592458 1_1:+8162400 None:intergenic
ATCAAAGAGAACACATTAAG+GGG 0.592562 1_1:+8163486 None:intergenic
GACAGAGACGGCGCCGATGA+CGG 0.593724 1_1:-8164380 Msa0005500:CDS
CCAAACGACGGCGACAGAGA+CGG 0.604022 1_1:-8164392 Msa0005500:CDS
TCATCTAGACTATCGGGGAA+AGG 0.604734 1_1:-8161671 Msa0005500:three_prime_UTR
TGGAATCACATGTGAGACAA+AGG 0.606070 1_1:+8165129 Msa0005510:intron
TAAAGTATCACTATTTGGTG+GGG 0.607778 1_1:+8165358 Msa0005510:intron
GGTAAAGTATCACTATTTGG+TGG 0.608011 1_1:+8165356 Msa0005510:intron
CAATCTGTGATTTGGTGTCG+TGG 0.608729 1_1:+8163631 None:intergenic
AGATTGGGCCTCCTCCATAG+AGG 0.612375 1_1:-8163614 Msa0005500:three_prime_UTR
TTTGCGAAATGGATAGGCTA+CGG 0.614160 1_1:-8161527 Msa0005500:three_prime_UTR
CACATGTGTAGACAGAGCAA+AGG 0.618363 1_1:-8161304 Msa0005500:three_prime_UTR
GATACATAGAGCAGCTGCGT+CGG 0.618915 1_1:+8165013 Msa0005510:intron
GCTAATTGAGGGATGACCCG+TGG 0.620463 1_1:+8165401 Msa0005510:intron
TTATGGTTAGAGATAATCCA+TGG 0.625033 1_1:-8163237 Msa0005500:three_prime_UTR
CTAATTGAGGGATGACCCGT+GGG 0.625448 1_1:+8165402 Msa0005510:intron
CTAGACCTAGAATTAAAGGA+AGG 0.629185 1_1:-8164237 Msa0005500:CDS
GCAGCTAGACATTCTCCTCA+GGG 0.631879 1_1:-8161617 Msa0005500:three_prime_UTR
AAAGGAAAGCTGAATCAGAA+CGG 0.631900 1_1:+8165147 Msa0005510:intron
AATTTAGGGATAGGGATGCA+AGG 0.632979 1_1:+8165454 Msa0005510:intron
AAAGAGAGTCAAAATCGAAG+AGG 0.634171 1_1:+8163523 None:intergenic
ACAACTCCAACCTCCATCGA+CGG 0.637687 1_1:+8164457 None:intergenic
GTGTTCGTGTTCGTGTTCGG+TGG 0.637730 1_1:+8164656 Msa0005510:intron
GAGCTAGTGGGTTAGCAGAG+TGG 0.641063 1_1:+8164973 Msa0005510:intron
GGGATGCAAGGACAGAAAGA+GGG 0.642108 1_1:+8165466 Msa0005510:intron
TATGTAGTTTACCTCTATGG+AGG 0.642851 1_1:+8163603 None:intergenic
GTCAAGACCTGAAAGTGGAA+CGG 0.648028 1_1:+8163674 None:intergenic
TCATGCATAGTTCAACAGGA+AGG 0.665934 1_1:+8164154 None:intergenic
TGAATGGTGTTGGAACTCAA+GGG 0.672244 1_1:-8162391 Msa0005500:three_prime_UTR
TTTCACACCCTTCTTCCCTG+AGG 0.674825 1_1:+8161602 None:intergenic
TCAACAATTGTCTAGATGGG+AGG 0.676643 1_1:+8161153 None:intergenic
CATGTTCATCTAGACTATCG+GGG 0.680390 1_1:-8161676 Msa0005500:three_prime_UTR
AGAGACGGCGCCGATGACGG+TGG 0.685333 1_1:-8164377 Msa0005500:CDS
GAGGTTGGAGTTGTACCAGA+CGG 0.695762 1_1:-8164448 Msa0005500:CDS
TGCAACAGAGAGTTGCAGAG+TGG 0.701461 1_1:+8163713 None:intergenic
CAACGCTAAAACAGACACGC+CGG 0.702951 1_1:-8164742 Msa0005500:CDS
TGAGAGGGACACGTTCGTGG+CGG 0.705181 1_1:+8164949 Msa0005510:intron
GCCACGACAATAAATCACAA+CGG 0.705634 1_1:+8162283 None:intergenic
CTTGGCAGAGTGTGACGCGG+TGG 0.706255 1_1:+8165072 Msa0005510:intron
AGACTTGGCAGAGTGTGACG+CGG 0.706454 1_1:+8165069 Msa0005510:intron
TGGTTGCGGCGAGAATGAAG+GGG 0.712013 1_1:+8163733 None:intergenic
TGACGAAATCGTCAATTTCG+GGG 0.717237 1_1:+8164769 Msa0005510:intron
AAGACCTGAAAGTGGAACGG+TGG 0.719235 1_1:+8163677 None:intergenic
GGTGGCGGTTCCGATGACGG+CGG 0.772550 1_1:-8164359 Msa0005500:CDS
GTACAGCGGTTACCAAACGA+CGG 0.773832 1_1:-8164404 Msa0005500:CDS
ATGACGGAGATATCGTACAG+CGG 0.814691 1_1:-8164418 Msa0005500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATTTTAATATTAATTCAT+AGG + chr1_1:8162438-8162457 None:intergenic 10.0%
!!! TATATTTTTGAGTTTAATTA+TGG - chr1_1:8162563-8162582 Msa0005500:intron 10.0%
!!! AAAATAGCAAAATTAATTTT+AGG + chr1_1:8162685-8162704 None:intergenic 10.0%
!! TTTAATATTAATCATAAAGT+TGG + chr1_1:8163610-8163629 None:intergenic 10.0%
!! TCATATTGTAAATATAAAAT+TGG - chr1_1:8165434-8165453 Msa0005500:five_prime_UTR 10.0%
!!! ATCGTAATTTTTTTGAATTT+TGG + chr1_1:8161909-8161928 None:intergenic 15.0%
!! GTATATGTTAATGATATATT+AGG - chr1_1:8162523-8162542 Msa0005500:intron 15.0%
!!! TAGTTTATGAGTTTAATTTT+AGG - chr1_1:8163014-8163033 Msa0005500:intron 15.0%
!!! TTAATTTTAGGAAGTATTTA+TGG - chr1_1:8163026-8163045 Msa0005500:intron 15.0%
!!! AAAAGCATTTATAAGTTTTT+AGG + chr1_1:8163775-8163794 None:intergenic 15.0%
!!! TTACTTATATTACTTTTCTT+TGG - chr1_1:8164425-8164444 Msa0005500:CDS 15.0%
!!! ATTAGTTTATAGAAAACATA+TGG + chr1_1:8164561-8164580 Msa0005510:intron 15.0%
!!! TGTTTTCTATAAACTAATTA+TGG - chr1_1:8164563-8164582 Msa0005500:intron 15.0%
!! TCAATTTCATATTCAAATTT+GGG + chr1_1:8165245-8165264 Msa0005510:intron 15.0%
!! TTCAATTTCATATTCAAATT+TGG + chr1_1:8165246-8165265 Msa0005510:intron 15.0%
!!! GACATTTACTTTGAAATTTA+GGG + chr1_1:8161024-8161043 None:intergenic 20.0%
!!! AGACATTTACTTTGAAATTT+AGG + chr1_1:8161025-8161044 None:intergenic 20.0%
!! AATTTCAAAGTAAATGTCTT+TGG - chr1_1:8161026-8161045 Msa0005500:three_prime_UTR 20.0%
!! CAATTCAATAAACAACAAAA+TGG - chr1_1:8161242-8161261 Msa0005500:three_prime_UTR 20.0%
!!! ATTTCTTTTTTGTGTTGTTT+AGG - chr1_1:8161973-8161992 Msa0005500:intron 20.0%
!! AAATATGAATTTAATTGCAG+AGG - chr1_1:8162267-8162286 Msa0005500:three_prime_UTR 20.0%
!!! ATCTTCTTTGTTTTGTTTAT+TGG - chr1_1:8163112-8163131 Msa0005500:intron 20.0%
!!! TCTTCTTTGTTTTGTTTATT+GGG - chr1_1:8163113-8163132 Msa0005500:intron 20.0%
!! ATTGGGTGATTATTTAATAT+TGG - chr1_1:8163130-8163149 Msa0005500:intron 20.0%
!! ATTTAATATTGGAAATGAGA+TGG - chr1_1:8163141-8163160 Msa0005500:intron 20.0%
!!! CAAATATTCTTTGCTTTTAT+TGG - chr1_1:8163319-8163338 Msa0005500:three_prime_UTR 20.0%
!! CTAGTTAATTAATTAGTGAA+TGG - chr1_1:8163439-8163458 Msa0005500:three_prime_UTR 20.0%
!! TATTAATCATAAAGTTGGAA+AGG + chr1_1:8163605-8163624 None:intergenic 20.0%
!! ATTCTATACGTTATGAAAAA+TGG + chr1_1:8163658-8163677 None:intergenic 20.0%
!! TCTATTACATTTCAATCTAT+GGG + chr1_1:8163848-8163867 None:intergenic 20.0%
!!! TTGTTTTGTCTACTAATTTT+AGG + chr1_1:8163908-8163927 None:intergenic 20.0%
!! TCTATAACTACATTTGAATA+TGG - chr1_1:8163977-8163996 Msa0005500:intron 20.0%
!!! AAAATGACATTTTAGTAATG+AGG - chr1_1:8164813-8164832 Msa0005500:CDS 20.0%
!! AATATTCATGCAAACAATAA+AGG - chr1_1:8165005-8165024 Msa0005500:CDS 20.0%
!! CAATTTCATATTCAAATTTG+GGG + chr1_1:8165244-8165263 Msa0005510:intron 20.0%
!!! TGACAAGTTGATAAAAAAAA+TGG + chr1_1:8165337-8165356 Msa0005510:intron 20.0%
!!! TACTTTGAAATTTAGGGATA+GGG + chr1_1:8161018-8161037 None:intergenic 25.0%
!!! TTACTTTGAAATTTAGGGAT+AGG + chr1_1:8161019-8161038 None:intergenic 25.0%
!!! TGAAGTTTTGTAATTGGATT+GGG + chr1_1:8161175-8161194 None:intergenic 25.0%
! TGATTGAAATTGTAAGTGAA+AGG + chr1_1:8161867-8161886 None:intergenic 25.0%
! ACTTGAAAAACATTCAAACA+CGG + chr1_1:8162360-8162379 None:intergenic 25.0%
!!! TCTTCAATTTTGATTTCCTT+CGG - chr1_1:8162894-8162913 Msa0005500:intron 25.0%
!! AATCTAAAATTTGAAACCGA+AGG + chr1_1:8162913-8162932 None:intergenic 25.0%
! CAAATTCATAAGTTAACACA+TGG + chr1_1:8163189-8163208 None:intergenic 25.0%
! AACTTATGAATTTGAAGAAG+AGG - chr1_1:8163195-8163214 Msa0005500:intron 25.0%
! TGTGAGTAGTTTATTGATAA+TGG + chr1_1:8163707-8163726 None:intergenic 25.0%
! CTATTACATTTCAATCTATG+GGG + chr1_1:8163847-8163866 None:intergenic 25.0%
! CTCTATTACATTTCAATCTA+TGG + chr1_1:8163849-8163868 None:intergenic 25.0%
!!! CTAATTTTAGGTTGTTTAGT+TGG + chr1_1:8163896-8163915 None:intergenic 25.0%
! ATAACTACATTTGAATATGG+TGG - chr1_1:8163980-8163999 Msa0005500:intron 25.0%
!! AGTGTCTTTTGATGTAATTT+TGG - chr1_1:8164093-8164112 Msa0005500:intron 25.0%
!! GTGTCTTTTGATGTAATTTT+GGG - chr1_1:8164094-8164113 Msa0005500:intron 25.0%
! AACTGCATTTCAAAAATTCT+TGG - chr1_1:8164398-8164417 Msa0005500:CDS 25.0%
! AAAATCTGTTGTTCAATTTG+TGG + chr1_1:8164461-8164480 None:intergenic 25.0%
! AATGCATAAACTGATCAATT+TGG - chr1_1:8164657-8164676 Msa0005500:CDS 25.0%
! AATACTGACACAACTAAAAA+TGG + chr1_1:8164982-8165001 Msa0005510:intron 25.0%
!!! CAAGTTGATAAAAAAAATGG+TGG + chr1_1:8165334-8165353 Msa0005510:intron 25.0%
! TTTCCAGATTGTGAAAATAA+AGG - chr1_1:8165472-8165491 Msa0005500:five_prime_UTR 25.0%
AAAGTAAATGTCTTTGGCTA+AGG - chr1_1:8161032-8161051 Msa0005500:three_prime_UTR 30.0%
! TAAAGTATCACTATTTGGTG+GGG + chr1_1:8161106-8161125 None:intergenic 30.0%
! GTAAAGTATCACTATTTGGT+GGG + chr1_1:8161107-8161126 None:intergenic 30.0%
!! GTGAAGTTTTGTAATTGGAT+TGG + chr1_1:8161176-8161195 None:intergenic 30.0%
!! TGTTGGTGAAGTTTTGTAAT+TGG + chr1_1:8161181-8161200 None:intergenic 30.0%
AATTGAGATCAGGGAATTTA+GGG + chr1_1:8161656-8161675 None:intergenic 30.0%
TAATTGAGATCAGGGAATTT+AGG + chr1_1:8161657-8161676 None:intergenic 30.0%
! TTTTGGATTTCTCGTTCTTA+CGG + chr1_1:8161892-8161911 None:intergenic 30.0%
ATTCAGAGTTCAAATTGAAG+AGG + chr1_1:8161947-8161966 None:intergenic 30.0%
GAAACTAGACCTAGAATTAA+AGG - chr1_1:8162220-8162239 Msa0005500:three_prime_UTR 30.0%
TTAATTGCAGAGGATGAATA+CGG - chr1_1:8162277-8162296 Msa0005500:three_prime_UTR 30.0%
TTCACTTCGATTAGAAAGAA+AGG - chr1_1:8162332-8162351 Msa0005500:three_prime_UTR 30.0%
TCACTTCGATTAGAAAGAAA+GGG - chr1_1:8162333-8162352 Msa0005500:three_prime_UTR 30.0%
CAACTTATGAGTAAATGATG+TGG + chr1_1:8162638-8162657 None:intergenic 30.0%
CAATATGTAGTTTACCTCTA+TGG + chr1_1:8162864-8162883 None:intergenic 30.0%
ATCAAAGAGAACACATTAAG+GGG + chr1_1:8162978-8162997 None:intergenic 30.0%
GATCAAAGAGAACACATTAA+GGG + chr1_1:8162979-8162998 None:intergenic 30.0%
AGATCAAAGAGAACACATTA+AGG + chr1_1:8162980-8162999 None:intergenic 30.0%
!! TTTAGGAAGTATTTATGGAG+TGG - chr1_1:8163031-8163050 Msa0005500:intron 30.0%
AATATTGGAAATGAGATGGA+TGG - chr1_1:8163145-8163164 Msa0005500:intron 30.0%
TGAATTTGAAGAAGAGGATT+TGG - chr1_1:8163201-8163220 Msa0005500:intron 30.0%
TTATGGTTAGAGATAATCCA+TGG - chr1_1:8163224-8163243 Msa0005500:intron 30.0%
!! AAGTGTGGTTTTTAATTAGC+TGG - chr1_1:8163395-8163414 Msa0005500:three_prime_UTR 30.0%
! ACTACTCACAAACATTTTAG+AGG - chr1_1:8163717-8163736 Msa0005500:three_prime_UTR 30.0%
! ATGTAATTTTGGGCTTATCA+TGG - chr1_1:8164104-8164123 Msa0005500:intron 30.0%
!!! ATCAGTTGACTTGTTTTTGT+GGG - chr1_1:8164224-8164243 Msa0005500:CDS 30.0%
! TTTTCCACTTGTTCAATGAA+TGG + chr1_1:8164537-8164556 Msa0005510:intron 30.0%
! GCCTTTTGATAGAAAAAAGA+AGG - chr1_1:8164585-8164604 Msa0005500:intron 30.0%
!!! GCCTTCTTTTTTCTATCAAA+AGG + chr1_1:8164589-8164608 Msa0005510:intron 30.0%
CACACACTAAAGAAAACATA+CGG + chr1_1:8164613-8164632 Msa0005510:intron 30.0%
ATCAGTTTATGCATTTCCAA+CGG + chr1_1:8164652-8164671 Msa0005510:intron 30.0%
TTCATGTTCATCTAGACTAT+CGG - chr1_1:8164783-8164802 Msa0005500:CDS 30.0%
TGGGAAAACAATAAAGTACA+TGG + chr1_1:8165397-8165416 Msa0005510:intron 30.0%
GAAAGTCATTCTAAACAGTT+GGG + chr1_1:8165416-8165435 Msa0005510:intron 30.0%
TGAAAGTCATTCTAAACAGT+TGG + chr1_1:8165417-8165436 Msa0005510:intron 30.0%
TCTTGAGAGTAGCTAATTGA+GGG + chr1_1:8161074-8161093 None:intergenic 35.0%
ATCTTGAGAGTAGCTAATTG+AGG + chr1_1:8161075-8161094 None:intergenic 35.0%
! GGTAAAGTATCACTATTTGG+TGG + chr1_1:8161108-8161127 None:intergenic 35.0%
! TGGGGTAAAGTATCACTATT+TGG + chr1_1:8161111-8161130 None:intergenic 35.0%
AAAGGAAAGCTGAATCAGAA+CGG + chr1_1:8161317-8161336 None:intergenic 35.0%
CAGAGAAGAATGATTGTTGT+TGG + chr1_1:8161566-8161585 None:intergenic 35.0%
! ATTTAGGGTTTGAAGGAGTT+TGG + chr1_1:8161641-8161660 None:intergenic 35.0%
AGTGAGAGTAATTGAGATCA+GGG + chr1_1:8161665-8161684 None:intergenic 35.0%
TAGTGAGAGTAATTGAGATC+AGG + chr1_1:8161666-8161685 None:intergenic 35.0%
AGTGACGAAATCGTCAATTT+CGG + chr1_1:8161697-8161716 None:intergenic 35.0%
!!! GTAAGTGAAAGGTTTTGAGT+TGG + chr1_1:8161856-8161875 None:intergenic 35.0%
CTAGACCTAGAATTAAAGGA+AGG - chr1_1:8162224-8162243 Msa0005500:three_prime_UTR 35.0%
AACTTCATGCATAGTTCAAC+AGG + chr1_1:8162314-8162333 None:intergenic 35.0%
AGATTACACAGTCATCCAAT+AGG - chr1_1:8162606-8162625 Msa0005500:intron 35.0%
TATGTAGTTTACCTCTATGG+AGG + chr1_1:8162861-8162880 None:intergenic 35.0%
AAAGAGAGTCAAAATCGAAG+AGG + chr1_1:8162941-8162960 None:intergenic 35.0%
CACATTAAGGGGAAGAAAAT+TGG + chr1_1:8162967-8162986 None:intergenic 35.0%
! GTTAACACATGGTATCGTTT+TGG + chr1_1:8163178-8163197 None:intergenic 35.0%
! TGAAGAAGAGGATTTGGTTA+TGG - chr1_1:8163207-8163226 Msa0005500:intron 35.0%
AAAGTTTGAACTTACTGCCA+TGG + chr1_1:8163244-8163263 None:intergenic 35.0%
! GTTGTTGTTCTTTAGAGACA+GGG + chr1_1:8163270-8163289 None:intergenic 35.0%
! TGTTGTTGTTCTTTAGAGAC+AGG + chr1_1:8163271-8163290 None:intergenic 35.0%
! ACCATTAGCTTGAATCATCT+TGG - chr1_1:8163531-8163550 Msa0005500:three_prime_UTR 35.0%
! CCATTAGCTTGAATCATCTT+GGG - chr1_1:8163532-8163551 Msa0005500:three_prime_UTR 35.0%
GTAACCTTTCTTGTTCCAAA+AGG - chr1_1:8163578-8163597 Msa0005500:three_prime_UTR 35.0%
! TAAAGTTGGAAAGGTCCTTT+TGG + chr1_1:8163596-8163615 None:intergenic 35.0%
CTAGAGAAAAGCTTAGATCA+GGG + chr1_1:8163745-8163764 None:intergenic 35.0%
TCTAGAGAAAAGCTTAGATC+AGG + chr1_1:8163746-8163765 None:intergenic 35.0%
! TAATTTTGGGCTTATCATGG+TGG - chr1_1:8164107-8164126 Msa0005500:intron 35.0%
! ATTTATTGTCGTGGCTGTTT+TGG - chr1_1:8164186-8164205 Msa0005500:CDS 35.0%
CACAAAAACAAGTCAACTGA+TGG + chr1_1:8164225-8164244 None:intergenic 35.0%
!!! CATCAGTTGACTTGTTTTTG+TGG - chr1_1:8164223-8164242 Msa0005500:CDS 35.0%
TTGTAGGAGTTGAATGTTAG+TGG - chr1_1:8164258-8164277 Msa0005500:CDS 35.0%
TGTAGGAGTTGAATGTTAGT+GGG - chr1_1:8164259-8164278 Msa0005500:CDS 35.0%
AGAAAGGTTCCGTATATAAG+CGG + chr1_1:8164308-8164327 None:intergenic 35.0%
!! ATACTTTTGATTCTCCTGTG+TGG - chr1_1:8164491-8164510 Msa0005500:intron 35.0%
ACTGTGAATTAAATGACCGT+TGG - chr1_1:8164633-8164652 Msa0005500:CDS 35.0%
TCATGTTCATCTAGACTATC+GGG - chr1_1:8164784-8164803 Msa0005500:CDS 35.0%
! AAGAAGGGTGTGAAAAATGA+CGG - chr1_1:8164867-8164886 Msa0005500:CDS 35.0%
TGTGAAAAATGACGGTTAAG+TGG - chr1_1:8164875-8164894 Msa0005500:CDS 35.0%
GACACAACTAAAAATGGTAG+AGG + chr1_1:8164976-8164995 Msa0005510:intron 35.0%
AACAATAAAGGACTTGATGC+TGG - chr1_1:8165017-8165036 Msa0005500:CDS 35.0%
AGTTCAGACGATATTGAGTA+AGG - chr1_1:8165041-8165060 Msa0005500:CDS 35.0%
ACAGAGCAAAGGATTATCAT+TGG - chr1_1:8165168-8165187 Msa0005500:CDS 35.0%
! AGGATTATCATTGGTAGCTA+TGG - chr1_1:8165177-8165196 Msa0005500:CDS 35.0%
TGGTCAACAATTGTCTAGAT+GGG + chr1_1:8165314-8165333 Msa0005510:intron 35.0%
AATTTAGGGATAGGGATGCA+AGG + chr1_1:8161010-8161029 None:intergenic 40.0%
! TATCACTATTTGGTGGGGTA+GGG + chr1_1:8161101-8161120 None:intergenic 40.0%
AATGTGTGGTTGTGGTGATT+GGG + chr1_1:8161130-8161149 None:intergenic 40.0%
TGGAATCACATGTGAGACAA+AGG + chr1_1:8161335-8161354 None:intergenic 40.0%
! TCAGGGAATTTAGGGTTTGA+AGG + chr1_1:8161648-8161667 None:intergenic 40.0%
TGACGAAATCGTCAATTTCG+GGG + chr1_1:8161695-8161714 None:intergenic 40.0%
GTGACGAAATCGTCAATTTC+GGG + chr1_1:8161696-8161715 None:intergenic 40.0%
GCGAACCTTCCTTTAATTCT+AGG + chr1_1:8162232-8162251 None:intergenic 40.0%
TCATGCATAGTTCAACAGGA+AGG + chr1_1:8162310-8162329 None:intergenic 40.0%
ATGATGTGGCACATTCCTAT+TGG + chr1_1:8162624-8162643 None:intergenic 40.0%
ACGACACCAAATCACAGATT+GGG - chr1_1:8162832-8162851 Msa0005500:intron 40.0%
ATCAGTTGCATGCTATTACG+TGG + chr1_1:8163493-8163512 None:intergenic 40.0%
CCCAAGATGATTCAAGCTAA+TGG + chr1_1:8163535-8163554 None:intergenic 40.0%
! TCATCTTGGGCATGTGTTTT+TGG - chr1_1:8163545-8163564 Msa0005500:three_prime_UTR 40.0%
!!! AGGTCCTTTTGGAACAAGAA+AGG + chr1_1:8163585-8163604 None:intergenic 40.0%
!! GAATATGGTGGACCAAATCA+AGG - chr1_1:8163992-8164011 Msa0005500:intron 40.0%
ACCAAATCAAGGTGATGTCT+TGG - chr1_1:8164003-8164022 Msa0005500:intron 40.0%
ACCAAGACATCACCTTGATT+TGG + chr1_1:8164007-8164026 None:intergenic 40.0%
TCAAGGTGATGTCTTGGTAT+TGG - chr1_1:8164009-8164028 Msa0005500:intron 40.0%
CTTCTTGCCTTCACTATGAA+TGG - chr1_1:8164054-8164073 Msa0005500:intron 40.0%
TCCAACACCATTCATAGTGA+AGG + chr1_1:8164064-8164083 None:intergenic 40.0%
! ATGAATGGTGTTGGAACTCA+AGG - chr1_1:8164069-8164088 Msa0005500:intron 40.0%
! TGAATGGTGTTGGAACTCAA+GGG - chr1_1:8164070-8164089 Msa0005500:intron 40.0%
!!! GTAGCTGTTGTTTTGCTGAT+TGG - chr1_1:8164136-8164155 Msa0005500:three_prime_UTR 40.0%
GCCACGACAATAAATCACAA+CGG + chr1_1:8164181-8164200 None:intergenic 40.0%
!!! GCTGTTTTGGTTCTATCACA+GGG - chr1_1:8164199-8164218 Msa0005500:CDS 40.0%
!! GTGGGATTTTGCTAGTTTGT+AGG - chr1_1:8164242-8164261 Msa0005500:CDS 40.0%
GTAGGAGTTGAATGTTAGTG+GGG - chr1_1:8164260-8164279 Msa0005500:CDS 40.0%
TAGGAGTTGAATGTTAGTGG+GGG - chr1_1:8164261-8164280 Msa0005500:CDS 40.0%
GAGGTATGTCCGCTTATATA+CGG - chr1_1:8164296-8164315 Msa0005500:CDS 40.0%
CAAGCTGCATAGATAGAGAA+AGG + chr1_1:8164324-8164343 None:intergenic 40.0%
GCTACCATTCATTGAACAAG+TGG - chr1_1:8164530-8164549 Msa0005500:intron 40.0%
TTTCCTTTATGTCCAGCATG+AGG - chr1_1:8164753-8164772 Msa0005500:CDS 40.0%
CATGTTCATCTAGACTATCG+GGG - chr1_1:8164785-8164804 Msa0005500:CDS 40.0%
AAATGACGGTTAAGTGGTGT+TGG - chr1_1:8164881-8164900 Msa0005500:CDS 40.0%
CGTCTGTAGCCAATGTTATA+GGG + chr1_1:8164908-8164927 Msa0005510:intron 40.0%
TCGTCTGTAGCCAATGTTAT+AGG + chr1_1:8164909-8164928 Msa0005510:intron 40.0%
ACCAACTTTGCGAAATGGAT+AGG - chr1_1:8164928-8164947 Msa0005500:CDS 40.0%
TTTGCGAAATGGATAGGCTA+CGG - chr1_1:8164934-8164953 Msa0005500:CDS 40.0%
! TCATTGGTAGCTATGGACAT+TGG - chr1_1:8165184-8165203 Msa0005500:CDS 40.0%
GGGTCGAAGTACACTATAAA+AGG + chr1_1:8165224-8165243 Msa0005510:intron 40.0%
TCAACAATTGTCTAGATGGG+AGG + chr1_1:8165311-8165330 Msa0005510:intron 40.0%
GTGGTCAACAATTGTCTAGA+TGG + chr1_1:8165315-8165334 Msa0005510:intron 40.0%
! ATCACTATTTGGTGGGGTAG+GGG + chr1_1:8161100-8161119 None:intergenic 45.0%
! GTATCACTATTTGGTGGGGT+AGG + chr1_1:8161102-8161121 None:intergenic 45.0%
ATGTGTGGTTGTGGTGATTG+GGG + chr1_1:8161129-8161148 None:intergenic 45.0%
GAATGTGTGGTTGTGGTGAT+TGG + chr1_1:8161131-8161150 None:intergenic 45.0%
! TTGGATTGGGAGTGTAGAAG+AGG + chr1_1:8161162-8161181 None:intergenic 45.0%
!! TGAGAGTGTTGTGAGTGTGT+TGG + chr1_1:8161198-8161217 None:intergenic 45.0%
!! TGTTGCTTTGGATGACTTGC+AGG + chr1_1:8161286-8161305 None:intergenic 45.0%
!! ACGGCAGAATAGTGTTGCTT+TGG + chr1_1:8161298-8161317 None:intergenic 45.0%
TTTGTTGGCAGCATGGATGT+TGG + chr1_1:8161355-8161374 None:intergenic 45.0%
AGAGTGGATGTCATGATCAC+AGG + chr1_1:8161475-8161494 None:intergenic 45.0%
! GTTGTTGGCTGTTGTTGTTG+TGG + chr1_1:8161551-8161570 None:intergenic 45.0%
GTAGTGTTCGTGTTCGTGTT+CGG + chr1_1:8161811-8161830 None:intergenic 45.0%
! ATGACGGAGATATCGTACAG+CGG - chr1_1:8162043-8162062 Msa0005500:intron 45.0%
AAAGAGAAGCTAGGGTTTCG+AGG - chr1_1:8162128-8162147 Msa0005500:intron 45.0%
GTCAAGACCTGAAAGTGGAA+CGG + chr1_1:8162790-8162809 None:intergenic 45.0%
! GTTCCACTTTCAGGTCTTGA+CGG - chr1_1:8162789-8162808 Msa0005500:intron 45.0%
! TTCCACTTTCAGGTCTTGAC+GGG - chr1_1:8162790-8162809 Msa0005500:intron 45.0%
!! CAATCTGTGATTTGGTGTCG+TGG + chr1_1:8162833-8162852 None:intergenic 45.0%
CACGACACCAAATCACAGAT+TGG - chr1_1:8162831-8162850 Msa0005500:intron 45.0%
GTAGTTTACCTCTATGGAGG+AGG + chr1_1:8162858-8162877 None:intergenic 45.0%
!! CTCTAGAGAGCATCTAACAG+TGG + chr1_1:8163365-8163384 None:intergenic 45.0%
TAGAGCGAGACTCAAAAGTG+TGG - chr1_1:8163380-8163399 Msa0005500:three_prime_UTR 45.0%
GCCTTCACTATGAATGGTGT+TGG - chr1_1:8164060-8164079 Msa0005500:intron 45.0%
! TTTTGGGCTTATCATGGTGG+AGG - chr1_1:8164110-8164129 Msa0005500:intron 45.0%
! TTTGGGCTTATCATGGTGGA+GGG - chr1_1:8164111-8164130 Msa0005500:intron 45.0%
GCCGTTGTGATTTATTGTCG+TGG - chr1_1:8164177-8164196 Msa0005500:CDS 45.0%
!!! GGCTGTTTTGGTTCTATCAC+AGG - chr1_1:8164198-8164217 Msa0005500:CDS 45.0%
GAATGTTAGTGGGGGTTCTT+TGG - chr1_1:8164269-8164288 Msa0005500:CDS 45.0%
GACTTTCATCTCAACCACAC+AGG + chr1_1:8164508-8164527 Msa0005510:five_prime_UTR 45.0%
ACTCCTCATGCTGGACATAA+AGG + chr1_1:8164759-8164778 Msa0005510:intron 45.0%
ATGAACTTGACTCCTCATGC+TGG + chr1_1:8164768-8164787 Msa0005510:intron 45.0%
TCATCTAGACTATCGGGGAA+AGG - chr1_1:8164790-8164809 Msa0005500:CDS 45.0%
ACATTCTCCTCAGGGAAGAA+GGG - chr1_1:8164852-8164871 Msa0005500:CDS 45.0%
! GGTGTTGGACCCTATAACAT+TGG - chr1_1:8164896-8164915 Msa0005500:CDS 45.0%
AGACGACCAACTTTGCGAAA+TGG - chr1_1:8164923-8164942 Msa0005500:CDS 45.0%
GCCTATCCATTTCGCAAAGT+TGG + chr1_1:8164932-8164951 Msa0005510:intron 45.0%
CACATGTGTAGACAGAGCAA+AGG - chr1_1:8165157-8165176 Msa0005500:CDS 45.0%
GGGATGCAAGGACAGAAAGA+GGG + chr1_1:8160998-8161017 None:intergenic 50.0%
AGGGATGCAAGGACAGAAAG+AGG + chr1_1:8160999-8161018 None:intergenic 50.0%
CTAATTGAGGGATGACCCGT+GGG + chr1_1:8161062-8161081 None:intergenic 50.0%
GAGTGTAGAAGAGGAGAGGA+GGG + chr1_1:8161153-8161172 None:intergenic 50.0%
! TTGGGAGTGTAGAAGAGGAG+AGG + chr1_1:8161157-8161176 None:intergenic 50.0%
CCAAGTCTGTGAACAAGCTC+CGG - chr1_1:8161407-8161426 Msa0005500:three_prime_UTR 50.0%
GATACATAGAGCAGCTGCGT+CGG + chr1_1:8161451-8161470 None:intergenic 50.0%
!! GTTGTTGTTGTGGTGGTGGA+AGG + chr1_1:8161541-8161560 None:intergenic 50.0%
! GTTGGCTGTTGTTGTTGTGG+TGG + chr1_1:8161548-8161567 None:intergenic 50.0%
GGAAGCAGCTTCTGCTTCTT+CGG + chr1_1:8161610-8161629 None:intergenic 50.0%
AAGAAGCAGAAGCTGCTTCC+TGG - chr1_1:8161610-8161629 Msa0005500:three_prime_UTR 50.0%
TGAAGGAGTTTGGAGAAGCC+AGG + chr1_1:8161631-8161650 None:intergenic 50.0%
CAACGCTAAAACAGACACGC+CGG - chr1_1:8161719-8161738 Msa0005500:intron 50.0%
!!! GTTTTGCTCTGAGACTGCAC+CGG + chr1_1:8161783-8161802 None:intergenic 50.0%
TTAGGTATCTTCGCCGTCGA+TGG - chr1_1:8161991-8162010 Msa0005500:intron 50.0%
ACAACTCCAACCTCCATCGA+CGG + chr1_1:8162007-8162026 None:intergenic 50.0%
GAGGTTGGAGTTGTACCAGA+CGG - chr1_1:8162013-8162032 Msa0005500:intron 50.0%
ACCAGACGGAAACGTGATGA+CGG - chr1_1:8162027-8162046 Msa0005500:intron 50.0%
GTACAGCGGTTACCAAACGA+CGG - chr1_1:8162057-8162076 Msa0005500:intron 50.0%
ATGAAGGGGAGCTGATGTTG+AGG + chr1_1:8162717-8162736 None:intergenic 50.0%
AGAGAGTTGCAGAGTGGTTG+CGG + chr1_1:8162745-8162764 None:intergenic 50.0%
TGCAACAGAGAGTTGCAGAG+TGG + chr1_1:8162751-8162770 None:intergenic 50.0%
AAGACCTGAAAGTGGAACGG+TGG + chr1_1:8162787-8162806 None:intergenic 50.0%
GACGGGCAACGCAAATTGAA+TGG - chr1_1:8162807-8162826 Msa0005500:intron 50.0%
AGGAGGCCCAATCTGTGATT+TGG + chr1_1:8162841-8162860 None:intergenic 50.0%
TGCAGCTAGACATTCTCCTC+AGG - chr1_1:8164843-8164862 Msa0005500:CDS 50.0%
GCAGCTAGACATTCTCCTCA+GGG - chr1_1:8164844-8164863 Msa0005500:CDS 50.0%
GACATTCTCCTCAGGGAAGA+AGG - chr1_1:8164851-8164870 Msa0005500:CDS 50.0%
TTTCACACCCTTCTTCCCTG+AGG + chr1_1:8164862-8164881 Msa0005510:intron 50.0%
CTTTGGCTAAGGCTCACCCA+CGG - chr1_1:8161043-8161062 Msa0005500:three_prime_UTR 55.0%
TTTGGCTAAGGCTCACCCAC+GGG - chr1_1:8161044-8161063 Msa0005500:three_prime_UTR 55.0%
GCTAATTGAGGGATGACCCG+TGG + chr1_1:8161063-8161082 None:intergenic 55.0%
GAGGAGGGAATGTGTGGTTG+TGG + chr1_1:8161138-8161157 None:intergenic 55.0%
AGAGGAGAGGAGGGAATGTG+TGG + chr1_1:8161144-8161163 None:intergenic 55.0%
GGAGTGTAGAAGAGGAGAGG+AGG + chr1_1:8161154-8161173 None:intergenic 55.0%
!! AGGCGAGTTTGTTGGCAGCA+TGG + chr1_1:8161362-8161381 None:intergenic 55.0%
AGACTTGGCAGAGTGTGACG+CGG + chr1_1:8161395-8161414 None:intergenic 55.0%
! CCGGAGCTTGTTCACAGACT+TGG + chr1_1:8161410-8161429 None:intergenic 55.0%
!! GAGCTAGTGGGTTAGCAGAG+TGG + chr1_1:8161491-8161510 None:intergenic 55.0%
!! GTTGTTGTGGTGGTGGAAGG+TGG + chr1_1:8161538-8161557 None:intergenic 55.0%
! GGCTGTTGTTGTTGTGGTGG+TGG + chr1_1:8161545-8161564 None:intergenic 55.0%
AGCTTCTGCTTCTTCGGTGG+TGG + chr1_1:8161604-8161623 None:intergenic 55.0%
AGCAGCTTCTGCTTCTTCGG+TGG + chr1_1:8161607-8161626 None:intergenic 55.0%
! TTCGTGTTCGTGTTCGGTGG+TGG + chr1_1:8161805-8161824 None:intergenic 55.0%
GTGTTCGTGTTCGTGTTCGG+TGG + chr1_1:8161808-8161827 None:intergenic 55.0%
TCCGTCATCACGTTTCCGTC+TGG + chr1_1:8162031-8162050 None:intergenic 55.0%
TCTCTTTCCACCGCCGTCAT+CGG + chr1_1:8162115-8162134 None:intergenic 55.0%
GGCGGTGGAAAGAGAAGCTA+GGG - chr1_1:8162120-8162139 Msa0005500:intron 55.0%
GAGCTGATGTTGAGGCACGA+AGG + chr1_1:8162709-8162728 None:intergenic 55.0%
TGGTTGCGGCGAGAATGAAG+GGG + chr1_1:8162731-8162750 None:intergenic 55.0%
GTGGTTGCGGCGAGAATGAA+GGG + chr1_1:8162732-8162751 None:intergenic 55.0%
AGTGGTTGCGGCGAGAATGA+AGG + chr1_1:8162733-8162752 None:intergenic 55.0%
TGGAACGGTGGCACTGCATA+AGG + chr1_1:8162775-8162794 None:intergenic 55.0%
AGTGCCACCGTTCCACTTTC+AGG - chr1_1:8162780-8162799 Msa0005500:intron 55.0%
TGCCCGTCAAGACCTGAAAG+TGG + chr1_1:8162795-8162814 None:intergenic 55.0%
AGATTGGGCCTCCTCCATAG+AGG - chr1_1:8162847-8162866 Msa0005500:intron 55.0%
! GTGGGGGTTCTTTGGTTTCG+AGG - chr1_1:8164277-8164296 Msa0005500:CDS 55.0%
GCTTTGCAGGTGACGTGAGC+CGG + chr1_1:8161429-8161448 None:intergenic 60.0%
TGAGAGGGACACGTTCGTGG+CGG + chr1_1:8161515-8161534 None:intergenic 60.0%
TGGTGAGAGGGACACGTTCG+TGG + chr1_1:8161518-8161537 None:intergenic 60.0%
!! GGTGGTGGAAGGTGGTGAGA+GGG + chr1_1:8161530-8161549 None:intergenic 60.0%
!! TGGTGGTGGAAGGTGGTGAG+AGG + chr1_1:8161531-8161550 None:intergenic 60.0%
ACGCCGGAGCAAAACAGTCC+CGG - chr1_1:8161735-8161754 Msa0005500:intron 60.0%
! GTGCCGGGACTGTTTTGCTC+CGG + chr1_1:8161741-8161760 None:intergenic 60.0%
GGTATCTTCGCCGTCGATGG+AGG - chr1_1:8161994-8162013 Msa0005500:intron 60.0%
TCTTCGCCGTCGATGGAGGT+TGG - chr1_1:8161998-8162017 Msa0005500:intron 60.0%
CCAAACGACGGCGACAGAGA+CGG - chr1_1:8162069-8162088 Msa0005500:intron 60.0%
ATCGGAACCGCCACCGTCAT+CGG + chr1_1:8162097-8162116 None:intergenic 60.0%
CGGCGGTGGAAAGAGAAGCT+AGG - chr1_1:8162119-8162138 Msa0005500:intron 60.0%
! GTGGCGGGAGGCGAGTTTGT+TGG + chr1_1:8161370-8161389 None:intergenic 65.0%
! AGAGTGTGACGCGGTGGTGG+CGG + chr1_1:8161386-8161405 None:intergenic 65.0%
CTTGGCAGAGTGTGACGCGG+TGG + chr1_1:8161392-8161411 None:intergenic 65.0%
!! AGCAGCTGCGTCGGCTTTGC+AGG + chr1_1:8161442-8161461 None:intergenic 65.0%
GTTCGTGGCGGCGAGCTAGT+GGG + chr1_1:8161503-8161522 None:intergenic 65.0%
CACCGCAGATGGCGTCGTTC+CGG - chr1_1:8161761-8161780 Msa0005500:intron 65.0%
CACCGGAACGACGCCATCTG+CGG + chr1_1:8161766-8161785 None:intergenic 65.0%
CCGTCTCTGTCGCCGTCGTT+TGG + chr1_1:8162072-8162091 None:intergenic 65.0%
!! GACAGAGACGGCGCCGATGA+CGG - chr1_1:8162081-8162100 Msa0005500:intron 65.0%
! GACGGTGGCGGTTCCGATGA+CGG - chr1_1:8162099-8162118 Msa0005500:intron 65.0%
! GAGTGTGACGCGGTGGTGGC+GGG + chr1_1:8161385-8161404 None:intergenic 70.0%
GGCAGAGTGTGACGCGGTGG+TGG + chr1_1:8161389-8161408 None:intergenic 70.0%
CGTTCGTGGCGGCGAGCTAG+TGG + chr1_1:8161504-8161523 None:intergenic 70.0%
AGTCCCGGCACCACCGCAGA+TGG - chr1_1:8161750-8161769 Msa0005500:intron 70.0%
ACGCCATCTGCGGTGGTGCC+GGG + chr1_1:8161756-8161775 None:intergenic 70.0%
GACGCCATCTGCGGTGGTGC+CGG + chr1_1:8161757-8161776 None:intergenic 70.0%
CGGAACGACGCCATCTGCGG+TGG + chr1_1:8161763-8161782 None:intergenic 70.0%
!! AGAGACGGCGCCGATGACGG+TGG - chr1_1:8162084-8162103 Msa0005500:intron 70.0%
! GGTGGCGGTTCCGATGACGG+CGG - chr1_1:8162102-8162121 Msa0005500:intron 70.0%
!! TGTGACGCGGTGGTGGCGGG+AGG + chr1_1:8161382-8161401 None:intergenic 75.0%
!! GACGGCGCCGATGACGGTGG+CGG - chr1_1:8162087-8162106 Msa0005500:intron 75.0%
! GGCGGTTCCGATGACGGCGG+TGG - chr1_1:8162105-8162124 Msa0005500:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 8160987 8165496 8160987 ID=Msa0005500;Name=Msa0005500
chr1_1 mRNA 8160987 8165496 8160987 ID=Msa0005500-mRNA-1;Parent=Msa0005500;Name=Msa0005500-mRNA-1;_AED=0.18;_eAED=0.18;_QI=274|1|1|1|0.5|0.4|5|1611|317
chr1_1 exon 8160987 8161714 8160987 ID=Msa0005500-mRNA-1:exon:2876;Parent=Msa0005500-mRNA-1
chr1_1 exon 8162185 8162508 8162185 ID=Msa0005500-mRNA-1:exon:2875;Parent=Msa0005500-mRNA-1
chr1_1 exon 8163235 8163757 8163235 ID=Msa0005500-mRNA-1:exon:2874;Parent=Msa0005500-mRNA-1
chr1_1 exon 8164129 8164488 8164129 ID=Msa0005500-mRNA-1:exon:2873;Parent=Msa0005500-mRNA-1
chr1_1 exon 8164593 8165496 8164593 ID=Msa0005500-mRNA-1:exon:2872;Parent=Msa0005500-mRNA-1
chr1_1 five_prime_UTR 8165223 8165496 8165223 ID=Msa0005500-mRNA-1:five_prime_utr;Parent=Msa0005500-mRNA-1
chr1_1 CDS 8164593 8165222 8164593 ID=Msa0005500-mRNA-1:cds;Parent=Msa0005500-mRNA-1
chr1_1 CDS 8164165 8164488 8164165 ID=Msa0005500-mRNA-1:cds;Parent=Msa0005500-mRNA-1
chr1_1 three_prime_UTR 8164129 8164164 8164129 ID=Msa0005500-mRNA-1:three_prime_utr;Parent=Msa0005500-mRNA-1
chr1_1 three_prime_UTR 8163235 8163757 8163235 ID=Msa0005500-mRNA-1:three_prime_utr;Parent=Msa0005500-mRNA-1
chr1_1 three_prime_UTR 8162185 8162508 8162185 ID=Msa0005500-mRNA-1:three_prime_utr;Parent=Msa0005500-mRNA-1
chr1_1 three_prime_UTR 8160987 8161714 8160987 ID=Msa0005500-mRNA-1:three_prime_utr;Parent=Msa0005500-mRNA-1
Gene Sequence

>Msa0005500

ATGGCTACTAAGCTATGTGATTCCTGCAAGTCATCCAAAGCAACACTATTCTGCCGTTCTGATTCAGCTTTCCTTTGTCTCACATGTGATTCCAACATCCATGCTGCCAACAAACTCGCCTCCCGCCACCACCGCGTCACACTCTGCCAAGTCTGTGAACAAGCTCCGGCTCACGTCACCTGCAAAGCCGACGCAGCTGCTCTATGTATCTCCTGTGATCATGACATCCACTCTGCTAACCCACTAGCTCGCCGCCACGAACGTGTCCCTCTCACCACCTTCCACCACCACAACAACAACAGCCAACAACAATCATTCTTCTCTGAAAATGATCACGATGCCACCACCGAAGAAGCAGAAGCTGCTTCCTGGCTTCTCCAAACTCCTTCAAACCCTAAATTCCCTGATCTCAATTACTCTCACTACTCGTACCCCGAAATTGACGATTTCGTCACTGTCAACGCTAAAACAGACACGCCGGAGCAAAACAGTCCCGGCACCACCGCAGATGGCGTCGTTCCGGTGCAGTCTCAGAGCAAAACCACCACCGAACACGAACACGAACACTACTCAGATATCAACATCGATTTCTCCAACTCAAAACCTTTCACTTACAATTTCAATCACACCGTATCTTCGCCGTCGATGGAGGTTGGAGTTGTACCAGACGGAAACGTGATGACGGAGATATCGTACAGCGGTTACCAAACGACGGCGACAGAGACGGCGCCGATGACGGTGGCGGTTCCGATGACGGCGGTGGAAAGAGAAGCTAGGGTTTCGAGGTACAGAGAGAAGAGAAAGAATAGAAAGTTCGAGAAGACAATTCGTTACGCTTCTAGAAAAGCGTATGCAGAAACTAGACCTAGAATTAAAGGAAGGTTCGCGAAACGTTCAGATTTAAATATGAATTTAATTGCAGAGGATGAATACGGCGTCGTTCCTTCCTGTTGA
Protein sequence

>Msa0005500

MATKLCDSCKSSKATLFCRSDSAFLCLTCDSNIHAANKLASRHHRVTLCQVCEQAPAHVTCKADAAALCISCDHDIHSANPLARRHERVPLTTFHHHNNNSQQQSFFSENDHDATTEEAEAASWLLQTPSNPKFPDLNYSHYSYPEIDDFVTVNAKTDTPEQNSPGTTADGVVPVQSQSKTTTEHEHEHYSDINIDFSNSKPFTYNFNHTVSSPSMEVGVVPDGNVMTEISYSGYQTTATETAPMTVAVPMTAVEREARVSRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSDLNMNLIAEDEYGVVPSC*