Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0833470 | RHN53703.1 | 85.281 | 231 | 26 | 4 | 2 | 226 | 49 | 277 | 7.43e-132 | 392 |
Msa0833470 | RHN53703.1 | 88.716 | 257 | 20 | 4 | 196 | 452 | 32 | 279 | 4.62e-156 | 453 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0833470 | A0A396HMN4 | 85.281 | 231 | 26 | 4 | 2 | 226 | 49 | 277 | 3.55e-132 | 392 |
Msa0833470 | A0A396HMN4 | 88.716 | 257 | 20 | 4 | 196 | 452 | 32 | 279 | 2.21e-156 | 453 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0015930 | Msa0833470 | 0.846095 | 2.693511e-59 | -8.615850e-47 |
Msa0605630 | Msa0833470 | 0.816755 | 4.695472e-52 | -8.615850e-47 |
Msa0628030 | Msa0833470 | 0.825854 | 3.735495e-54 | -8.615850e-47 |
Msa0646580 | Msa0833470 | 0.800889 | 1.166072e-48 | -8.615850e-47 |
Msa0663490 | Msa0833470 | 0.826641 | 2.426230e-54 | -8.615850e-47 |
Msa0686210 | Msa0833470 | 0.801379 | 9.257386e-49 | -8.615850e-47 |
Msa0729090 | Msa0833470 | 0.851322 | 9.568636e-61 | -8.615850e-47 |
Msa0741230 | Msa0833470 | 0.805954 | 1.040220e-49 | -8.615850e-47 |
Msa0795730 | Msa0833470 | 0.941253 | 5.737644e-101 | -8.615850e-47 |
Msa0833470 | Msa0861860 | 0.805169 | 1.519860e-49 | -8.615850e-47 |
Msa0833470 | Msa0968610 | 0.811594 | 6.474884e-51 | -8.615850e-47 |
Msa0833470 | Msa1274380 | 0.809880 | 1.520630e-50 | -8.615850e-47 |
Msa0140630 | Msa0833470 | 0.805494 | 1.299263e-49 | -8.615850e-47 |
Msa0156370 | Msa0833470 | 0.848503 | 5.880809e-60 | -8.615850e-47 |
Msa0365950 | Msa0833470 | 0.800968 | 1.123336e-48 | -8.615850e-47 |
Msa0381500 | Msa0833470 | 0.802254 | 6.122956e-49 | -8.615850e-47 |
Msa0413870 | Msa0833470 | 0.810453 | 1.144293e-50 | -8.615850e-47 |
Msa0469560 | Msa0833470 | -0.836723 | 7.915383e-57 | -8.615850e-47 |
Msa0515270 | Msa0833470 | -0.847266 | 1.288994e-59 | -8.615850e-47 |
Msa0529840 | Msa0833470 | 0.807458 | 5.006626e-50 | -8.615850e-47 |
Msa0550120 | Msa0833470 | 0.834490 | 2.909175e-56 | -8.615850e-47 |
Msa0585830 | Msa0833470 | 0.834074 | 3.698718e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0833470 | MtrunA17_Chr5g0398711 | 88.716 | 257 | 20 | 4 | 196 | 452 | 32 | 279 | 4.25e-160 | 453 |
Msa0833470 | MtrunA17_Chr5g0398711 | 85.281 | 231 | 26 | 4 | 2 | 226 | 49 | 277 | 6.83e-136 | 392 |
Msa0833470 | MtrunA17_Chr5g0398721 | 89.700 | 233 | 23 | 1 | 220 | 452 | 1 | 232 | 2.06e-150 | 427 |
Msa0833470 | MtrunA17_Chr5g0398721 | 89.655 | 232 | 16 | 3 | 1 | 226 | 1 | 230 | 6.66e-142 | 405 |
Msa0833470 | MtrunA17_Chr4g0056901 | 58.898 | 236 | 80 | 6 | 223 | 452 | 1 | 225 | 3.71e-77 | 239 |
Msa0833470 | MtrunA17_Chr4g0056901 | 54.894 | 235 | 82 | 8 | 4 | 226 | 1 | 223 | 9.45e-65 | 207 |
Msa0833470 | MtrunA17_Chr4g0011241 | 51.055 | 237 | 104 | 5 | 223 | 452 | 1 | 232 | 1.68e-71 | 225 |
Msa0833470 | MtrunA17_Chr4g0011241 | 49.561 | 228 | 98 | 7 | 4 | 219 | 1 | 223 | 1.05e-59 | 195 |
Msa0833470 | MtrunA17_Chr6g0476521 | 29.130 | 230 | 137 | 9 | 227 | 451 | 4 | 212 | 2.43e-21 | 92.4 |
Msa0833470 | MtrunA17_Chr6g0476521 | 27.602 | 221 | 129 | 9 | 8 | 218 | 4 | 203 | 5.32e-16 | 77.0 |
Msa0833470 | MtrunA17_Chr6g0476511 | 29.565 | 230 | 134 | 10 | 227 | 451 | 4 | 210 | 1.58e-20 | 90.1 |
Msa0833470 | MtrunA17_Chr7g0275631 | 28.384 | 229 | 150 | 7 | 227 | 451 | 3 | 221 | 4.85e-18 | 83.2 |
Msa0833470 | MtrunA17_Chr7g0275631 | 27.650 | 217 | 146 | 6 | 8 | 219 | 3 | 213 | 6.61e-13 | 68.2 |
Msa0833470 | MtrunA17_Chr1g0188241 | 25.764 | 229 | 147 | 8 | 226 | 451 | 3 | 211 | 9.34e-18 | 82.0 |
Msa0833470 | MtrunA17_Chr1g0188241 | 26.484 | 219 | 135 | 9 | 7 | 218 | 3 | 202 | 1.61e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0833470 | AT2G45360.1 | 52.381 | 231 | 93 | 5 | 223 | 452 | 1 | 215 | 6.41e-70 | 221 |
Msa0833470 | AT2G45360.1 | 51.351 | 222 | 84 | 7 | 4 | 218 | 1 | 205 | 7.45e-59 | 192 |
Msa0833470 | AT3G60780.1 | 50.215 | 233 | 98 | 6 | 223 | 452 | 1 | 218 | 8.37e-67 | 213 |
Msa0833470 | AT3G60780.1 | 49.784 | 231 | 91 | 8 | 4 | 225 | 1 | 215 | 2.30e-58 | 191 |
Msa0833470 | AT1G62840.1 | 47.718 | 241 | 98 | 8 | 223 | 452 | 1 | 224 | 1.00e-52 | 177 |
Msa0833470 | AT1G62840.1 | 45.022 | 231 | 96 | 10 | 4 | 219 | 1 | 215 | 8.15e-41 | 145 |
Msa0833470 | AT1G12320.1 | 43.348 | 233 | 100 | 8 | 223 | 448 | 1 | 208 | 1.10e-42 | 150 |
Msa0833470 | AT1G12320.1 | 40.969 | 227 | 99 | 8 | 4 | 219 | 1 | 203 | 1.06e-35 | 131 |
Find 124 sgRNAs with CRISPR-Local
Find 515 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGGGGATGTTCACTTTATT+AGG | 0.233385 | 5_4:-6625644 | Msa0833470:CDS |
TTTATTTCTAAGATGGATTC+TGG | 0.260989 | 5_4:-6625855 | Msa0833470:CDS |
TTTATTTCTAAGATGGATTC+TGG | 0.260989 | 5_4:-6633087 | Msa0833470:CDS |
TATGAGTTAGTTGCTCTCTC+TGG | 0.291619 | 5_4:+6626290 | None:intergenic |
TTTAGTAGGAATAGATTTCT+TGG | 0.332754 | 5_4:-6633202 | Msa0833470:CDS |
TTTGATTGGAATAGATTTCT+TGG | 0.340143 | 5_4:-6625970 | Msa0833470:CDS |
TATGAATTAGTTGCTCTCTC+TGG | 0.350428 | 5_4:+6633525 | None:intergenic |
ATGGCGGAGCGTGGTGGCGC+GGG | 0.351116 | 5_4:-6625826 | Msa0833470:CDS |
AATCACCTTGTCAGTGAATC+TGG | 0.357557 | 5_4:-6633468 | Msa0833470:CDS |
TGTTCGGTCGGTGTTTCTTC+CGG | 0.371763 | 5_4:-6633022 | Msa0833470:CDS |
AGATGGATTCTGGTTATATA+TGG | 0.373750 | 5_4:-6625845 | Msa0833470:CDS |
AGATGGATTCTGGTTATATA+TGG | 0.373750 | 5_4:-6633077 | Msa0833470:CDS |
TGGTATGTCACCGGAAGTTT+TGG | 0.381944 | 5_4:-6626021 | Msa0833470:CDS |
TGGTATGTCACCGGAAGTTT+TGG | 0.381944 | 5_4:-6633253 | Msa0833470:CDS |
TGAAAGACATGAAACTTGTT+TGG | 0.393646 | 5_4:-6633551 | Msa0833470:CDS |
ATTTCTTGGTTGTTGATTCT+CGG | 0.396616 | 5_4:-6625956 | Msa0833470:CDS |
ATTTCTTGGTTGTTGATTCT+CGG | 0.396616 | 5_4:-6633188 | Msa0833470:CDS |
TCTGATCTTGACCGTTCATC+TGG | 0.402447 | 5_4:+6633300 | None:intergenic |
CACGTGTTATTCATAATAGA+TGG | 0.406729 | 5_4:-6632921 | Msa0833470:CDS |
TGAAAGACATGAAACTTGTT+TGG | 0.407611 | 5_4:-6626316 | Msa0833470:CDS |
TGTTCGGTCAGTATTTCTTC+CGG | 0.416161 | 5_4:-6625790 | Msa0833470:CDS |
GAAGTGATGGATGGTTTGAT+TGG | 0.429509 | 5_4:-6625984 | Msa0833470:CDS |
GGTGTTTCTTCCGGTGGGGA+AGG | 0.435607 | 5_4:-6633013 | Msa0833470:CDS |
ATGAGTTAGTTGCTCTCTCT+GGG | 0.435811 | 5_4:+6626291 | None:intergenic |
AAGCATGTTGATCAACGATC+AGG | 0.439670 | 5_4:-6625663 | Msa0833470:CDS |
TCCGATCTTGACCGTTCATC+AGG | 0.440907 | 5_4:+6626068 | None:intergenic |
ATGAATTAGTTGCTCTCTCT+GGG | 0.444178 | 5_4:+6633526 | None:intergenic |
AGAATCCGGTGCGGCGGAGC+TGG | 0.456364 | 5_4:-6626222 | Msa0833470:CDS |
GGCGGAGCTGGTATCCTCTA+TGG | 0.456798 | 5_4:-6626210 | Msa0833470:CDS |
TGGATAAACCAACACTCGTT+GGG | 0.457594 | 5_4:+6626132 | None:intergenic |
CGGTCGGTGTTTCTTCCGGT+GGG | 0.457893 | 5_4:-6633018 | Msa0833470:CDS |
GAAGTGATGGATGGTTTAGT+AGG | 0.459582 | 5_4:-6633216 | Msa0833470:CDS |
CATTTATCAGCTGCCGGTGG+TGG | 0.462107 | 5_4:-6632976 | Msa0833470:CDS |
GGCGGAGTTTGTTTCAGCTA+TGG | 0.469299 | 5_4:-6633442 | Msa0833470:CDS |
ATGGCGAAGCGTAGTGGCGC+GGG | 0.470110 | 5_4:-6633058 | Msa0833470:CDS |
GGGGATCACGACGACTTGTT+CGG | 0.470863 | 5_4:-6625806 | Msa0833470:CDS |
ACCTGTGTGACCGCTTGCTA+TGG | 0.473046 | 5_4:+6626112 | None:intergenic |
AGTATTTCTTCCGGTGGGGA+AGG | 0.473923 | 5_4:-6625781 | Msa0833470:CDS |
GTGTTTCTTCCGGTGGGGAA+GGG | 0.481603 | 5_4:-6633012 | Msa0833470:CDS |
AGATTCACTGACAAGGTGAT+TGG | 0.483078 | 5_4:+6633470 | None:intergenic |
TTCTCTAGGAAGGTGATTGA+TGG | 0.483897 | 5_4:+6626241 | None:intergenic |
TGTTACGGCGATGAAGCATA+AGG | 0.490118 | 5_4:-6625712 | Msa0833470:CDS |
AATCACCTTCCTAGAGAATC+CGG | 0.490375 | 5_4:-6626236 | Msa0833470:CDS |
AAGGTGATTGATGGTAGTTA+TGG | 0.490442 | 5_4:+6626250 | None:intergenic |
GACGTGCTGTTCATAATAGA+TGG | 0.491292 | 5_4:-6625689 | Msa0833470:CDS |
CGGTCAGTATTTCTTCCGGT+GGG | 0.491351 | 5_4:-6625786 | Msa0833470:CDS |
GTCACGACGGCTTGTTCGGT+CGG | 0.491936 | 5_4:-6633034 | Msa0833470:CDS |
GGTTCTCCTACCAAAACTTC+CGG | 0.492682 | 5_4:+6626011 | None:intergenic |
GGTTCTCCTACCAAAACTTC+CGG | 0.492682 | 5_4:+6633243 | None:intergenic |
TGGCGGAGCGTGGTGGCGCG+GGG | 0.493800 | 5_4:-6625825 | Msa0833470:CDS |
TATGGCGGAGCGTGGTGGCG+CGG | 0.506489 | 5_4:-6625827 | Msa0833470:CDS |
CTGGTATCCTCTATGGCAGC+AGG | 0.510352 | 5_4:-6626203 | Msa0833470:CDS |
TTTGTTTCAGCTATGGCGGC+AGG | 0.510446 | 5_4:-6633435 | Msa0833470:CDS |
CACAGAGTTCTCACCACCAC+CGG | 0.513456 | 5_4:+6632963 | None:intergenic |
TGGTGGTGACAACTCTGTTA+CGG | 0.515438 | 5_4:-6625727 | Msa0833470:CDS |
AAACCATCCATCACTTCCTC+CGG | 0.520767 | 5_4:+6625990 | None:intergenic |
CTTGCAAAGTTGAGTAGTAA+AGG | 0.521658 | 5_4:-6625906 | Msa0833470:CDS |
ACCTGTGTGACGTGATGCTA+TGG | 0.522581 | 5_4:+6633344 | None:intergenic |
AACAGAGTTGTCACCACCAC+CGG | 0.522950 | 5_4:+6625731 | None:intergenic |
TTCACTGACAAGGTGATTGG+TGG | 0.530233 | 5_4:+6633473 | None:intergenic |
AAACCATCCATCACTTCCTC+CGG | 0.536217 | 5_4:+6633222 | None:intergenic |
GGATACCAGCTCCGCCGCAC+CGG | 0.538075 | 5_4:+6626217 | None:intergenic |
GTTACGGCGATGAAGCATAA+GGG | 0.543192 | 5_4:-6625711 | Msa0833470:CDS |
AGGAGAACCGGAGGAAGTGA+TGG | 0.549491 | 5_4:-6625997 | Msa0833470:CDS |
AGGAGAACCGGAGGAAGTGA+TGG | 0.549491 | 5_4:-6633229 | Msa0833470:CDS |
TCCTGATGAACGGTCAAGAT+CGG | 0.549497 | 5_4:-6626069 | Msa0833470:CDS |
GGTGGGGAAGGGAATTCATA+TGG | 0.553993 | 5_4:-6633001 | Msa0833470:CDS |
GGTGGGGAAGGGAATTCATA+TGG | 0.556013 | 5_4:-6625769 | Msa0833470:CDS |
ATGGATAAACCAACACTCGT+TGG | 0.556717 | 5_4:+6626131 | None:intergenic |
CGTTGGAATAACTCCGCCAT+GGG | 0.559266 | 5_4:+6633380 | None:intergenic |
TCGGTCAGTATTTCTTCCGG+TGG | 0.561365 | 5_4:-6625787 | Msa0833470:CDS |
GTATTTCTTCCGGTGGGGAA+GGG | 0.563160 | 5_4:-6625780 | Msa0833470:CDS |
AGCATGTTGATCAACGATCA+GGG | 0.563826 | 5_4:-6625662 | Msa0833470:CDS |
GGAGTTATTCCAACGAGTGT+TGG | 0.565148 | 5_4:-6633372 | Msa0833470:CDS |
TCCTAGAGAATCCGGTGCGG+CGG | 0.565345 | 5_4:-6626228 | Msa0833470:CDS |
TCGGTCGGTGTTTCTTCCGG+TGG | 0.566963 | 5_4:-6633019 | Msa0833470:CDS |
GGAGTTATCCCAACGAGTGT+TGG | 0.567790 | 5_4:-6626140 | Msa0833470:CDS |
TGGCGAAGCGTAGTGGCGCG+GGG | 0.569786 | 5_4:-6633057 | Msa0833470:CDS |
TTTCAGCTATGGCGGCAGGA+TGG | 0.575184 | 5_4:-6633431 | Msa0833470:CDS |
ATGGCGCATTTATCAGCTGC+CGG | 0.576415 | 5_4:-6632982 | Msa0833470:CDS |
CTCAGCTGATAGTAGAAACA+TGG | 0.579071 | 5_4:-6633404 | Msa0833470:CDS |
GTTCCATCCTGCTGCCATAG+AGG | 0.581085 | 5_4:+6626196 | None:intergenic |
TTATATATGGCGAAGCGTAG+TGG | 0.584131 | 5_4:-6633064 | Msa0833470:CDS |
TGGTGAGAACTCTGTGGTGG+CGG | 0.585821 | 5_4:-6632956 | Msa0833470:CDS |
ATATGAATTCCCTTCCCCAC+CGG | 0.588515 | 5_4:+6625771 | None:intergenic |
ATATGAATTCCCTTCCCCAC+CGG | 0.588515 | 5_4:+6633003 | None:intergenic |
TCCGCCGCACCGGATTCTCT+AGG | 0.590144 | 5_4:+6626227 | None:intergenic |
ATGGATAAACCAACACTCGT+TGG | 0.590421 | 5_4:+6633363 | None:intergenic |
CTCAGCTGATAGTAGAAACA+TGG | 0.594393 | 5_4:-6626172 | Msa0833470:CDS |
GGGAGAAGCTGGTATGTCAC+CGG | 0.594972 | 5_4:-6626030 | Msa0833470:CDS |
GGGAGAAGCTGGTATGTCAC+CGG | 0.594972 | 5_4:-6633262 | Msa0833470:CDS |
TCGTTGGAATAACTCCGCCA+TGG | 0.605659 | 5_4:+6633379 | None:intergenic |
GGTCGGTGTTTCTTCCGGTG+GGG | 0.609408 | 5_4:-6633017 | Msa0833470:CDS |
TTATATATGGCGGAGCGTGG+TGG | 0.612287 | 5_4:-6625832 | Msa0833470:CDS |
CCGCACCGGATTCTCTAGGA+AGG | 0.614758 | 5_4:+6626231 | None:intergenic |
GAACCGGAGGAAGTGATGGA+TGG | 0.618455 | 5_4:-6625993 | Msa0833470:CDS |
GAACCGGAGGAAGTGATGGA+TGG | 0.618455 | 5_4:-6633225 | Msa0833470:CDS |
GGAGTTTGTTTCAGCTATGG+CGG | 0.620173 | 5_4:-6633439 | Msa0833470:CDS |
TCCATAGCAAGCGGTCACAC+AGG | 0.622700 | 5_4:-6626113 | Msa0833470:CDS |
TGTGTATAGTTCCAGATGAA+CGG | 0.623096 | 5_4:-6633311 | Msa0833470:CDS |
GGTCAGTATTTCTTCCGGTG+GGG | 0.623177 | 5_4:-6625785 | Msa0833470:CDS |
TGGTTATATATGGCGGAGCG+TGG | 0.623341 | 5_4:-6625835 | Msa0833470:CDS |
ATAGTAGAAACATGGTCCCA+TGG | 0.627081 | 5_4:-6633396 | Msa0833470:CDS |
GGCGAAGCGTAGTGGCGCGG+GGG | 0.628973 | 5_4:-6633056 | Msa0833470:CDS |
TATCCTCTATGGCAGCAGGA+TGG | 0.630751 | 5_4:-6626199 | Msa0833470:CDS |
TATGGCGAAGCGTAGTGGCG+CGG | 0.632704 | 5_4:-6633059 | Msa0833470:CDS |
TGGTGGTGAGAACTCTGTGG+TGG | 0.632865 | 5_4:-6632959 | Msa0833470:CDS |
TGTGCATAGTTCCTGATGAA+CGG | 0.633781 | 5_4:-6626079 | Msa0833470:CDS |
ATAGCAAGCGGTCACACAGG+TGG | 0.636263 | 5_4:-6626110 | Msa0833470:CDS |
CCACACCAGATTCACTGACA+AGG | 0.641093 | 5_4:+6633463 | None:intergenic |
GGATTAAGCATGTTGATCAA+CGG | 0.643256 | 5_4:-6632900 | Msa0833470:intron |
TGGATTCTGGTTATATATGG+CGG | 0.643639 | 5_4:-6625842 | Msa0833470:CDS |
GCATGTTGATCAACGATCAG+GGG | 0.659538 | 5_4:-6625661 | Msa0833470:CDS |
CGGTGGTGGTGAGAACTCTG+TGG | 0.659832 | 5_4:-6632962 | Msa0833470:CDS |
CCTTGTCAGTGAATCTGGTG+TGG | 0.666939 | 5_4:-6633463 | Msa0833470:CDS |
GTTGGTTTATCCATAGCAAG+CGG | 0.671936 | 5_4:-6626122 | Msa0833470:CDS |
GCGCATTTATCAGCTGCCGG+TGG | 0.672929 | 5_4:-6632979 | Msa0833470:CDS |
TGTCAGTGAATCTGGTGTGG+CGG | 0.676538 | 5_4:-6633460 | Msa0833470:CDS |
TGAATTAGTTGCTCTCTCTG+GGG | 0.679617 | 5_4:+6633527 | None:intergenic |
TGAGTTAGTTGCTCTCTCTG+GGG | 0.683268 | 5_4:+6626292 | None:intergenic |
ATAGTAGAAACATGGTCACA+CGG | 0.693003 | 5_4:-6626164 | Msa0833470:CDS |
GTAGAAACATGGTCCCATGG+CGG | 0.759198 | 5_4:-6633393 | Msa0833470:CDS |
CCTTCCTAGAGAATCCGGTG+CGG | 0.793946 | 5_4:-6626231 | Msa0833470:CDS |
GTAGAAACATGGTCACACGG+CGG | 0.823354 | 5_4:-6626161 | Msa0833470:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAATTAATATTTTATTTAAT+TGG | + | chr5_4:6627897-6627916 | None:intergenic | 0.0% |
!! | TATATATAATTATTTAAATT+TGG | - | chr5_4:6631167-6631186 | Msa0833470:intron | 0.0% |
!!! | TCACTATAAAAAATATTTTA+GGG | + | chr5_4:6627019-6627038 | None:intergenic | 10.0% |
!!! | ATCACTATAAAAAATATTTT+AGG | + | chr5_4:6627020-6627039 | None:intergenic | 10.0% |
!! | AATAAAAAAAAAAACTATGT+TGG | - | chr5_4:6627141-6627160 | Msa0833470:intron | 10.0% |
!! | ATAAAAAAAAAAACTATGTT+GGG | - | chr5_4:6627142-6627161 | Msa0833470:intron | 10.0% |
!! | AAAAGAAAAATAATAGAAAA+AGG | - | chr5_4:6627759-6627778 | Msa0833470:intron | 10.0% |
!! | GAAAATTAAACATAAATAAA+TGG | + | chr5_4:6628584-6628603 | None:intergenic | 10.0% |
!! | CTATATATAAAAAAAAAACT+TGG | - | chr5_4:6628603-6628622 | Msa0833470:intron | 10.0% |
!!! | TTTTTTATCATAGTTATTAA+AGG | + | chr5_4:6629612-6629631 | None:intergenic | 10.0% |
!!! | GTAAAAAAATTACTTTTTAA+AGG | + | chr5_4:6629812-6629831 | None:intergenic | 10.0% |
!! | AAAAATAAACAAAACAAATT+AGG | + | chr5_4:6629910-6629929 | None:intergenic | 10.0% |
!!! | TTTGTTTTGTTTATTTTTTT+TGG | - | chr5_4:6629912-6629931 | Msa0833470:intron | 10.0% |
!!! | TTCTTTTTTTTTTTCAAAAT+AGG | - | chr5_4:6630314-6630333 | Msa0833470:intron | 10.0% |
!!! | TCTTTTTTTTTTTCAAAATA+GGG | - | chr5_4:6630315-6630334 | Msa0833470:intron | 10.0% |
!!! | TTGATAAGTTTTAATTTTTA+TGG | + | chr5_4:6631199-6631218 | None:intergenic | 10.0% |
!!! | AATTTTCATAAAAAAGTATA+AGG | + | chr5_4:6631262-6631281 | None:intergenic | 10.0% |
!! | TTGAAATTTGAAAATGATTA+TGG | - | chr5_4:6626424-6626443 | Msa0833470:intron | 15.0% |
!!! | TAACATTTCTTTTCTTAAAA+AGG | + | chr5_4:6627203-6627222 | None:intergenic | 15.0% |
!! | TTTATTCTAGATAGAAAAAT+TGG | - | chr5_4:6628160-6628179 | Msa0833470:intron | 15.0% |
!! | AGTTAATGATATTTAACAAA+AGG | - | chr5_4:6628202-6628221 | Msa0833470:intron | 15.0% |
!! | TTAAAACTACTTATAACAAA+GGG | - | chr5_4:6628471-6628490 | Msa0833470:intron | 15.0% |
!!! | GTGTTATTATACAATAATAT+TGG | + | chr5_4:6628675-6628694 | None:intergenic | 15.0% |
!! | AATACAAAAAAGTAAATAGT+AGG | - | chr5_4:6629406-6629425 | Msa0833470:intron | 15.0% |
!! | GAAATAGAGATAATATTAAA+TGG | - | chr5_4:6629491-6629510 | Msa0833470:intron | 15.0% |
!! | TTAAAGGAATTAGTATTTAA+AGG | + | chr5_4:6629596-6629615 | None:intergenic | 15.0% |
!! | TTTGTTTAAAAAAATCGTTT+CGG | + | chr5_4:6629663-6629682 | None:intergenic | 15.0% |
!!! | TTTTCTTAAAAAAATGGTTT+CGG | + | chr5_4:6629717-6629736 | None:intergenic | 15.0% |
!!! | TAGCATTTTTCTTAAAAAAA+TGG | + | chr5_4:6629723-6629742 | None:intergenic | 15.0% |
!! | ATTAAAACAATGTATTTCTT+TGG | - | chr5_4:6631077-6631096 | Msa0833470:intron | 15.0% |
!! | TACAAATTTATTCTATTTCA+TGG | - | chr5_4:6631349-6631368 | Msa0833470:intron | 15.0% |
!!! | TTTATGATGAATTTTTTCAT+TGG | - | chr5_4:6631388-6631407 | Msa0833470:intron | 15.0% |
!!! | ATATTTTTATGATATTCTGT+AGG | - | chr5_4:6632204-6632223 | Msa0833470:intron | 15.0% |
!!! | TGCTAATTTTATTTCTAAGA+TGG | - | chr5_4:6626096-6626115 | Msa0833470:CDS | 20.0% |
!! | AGGAAAGTAAAAATATGATT+TGG | + | chr5_4:6626389-6626408 | None:intergenic | 20.0% |
!!! | ACTTTCCTTTTTTGTAAATA+CGG | - | chr5_4:6626401-6626420 | Msa0833470:intron | 20.0% |
!!! | TTTTTTGTTGATCATGATTA+TGG | - | chr5_4:6626468-6626487 | Msa0833470:intron | 20.0% |
!! | TATAACATGTTTGAAAAAGA+TGG | + | chr5_4:6626708-6626727 | None:intergenic | 20.0% |
!!! | ATCTTTTTCAAACATGTTAT+AGG | - | chr5_4:6626707-6626726 | Msa0833470:intron | 20.0% |
!!! | TCTTTTTCAAACATGTTATA+GGG | - | chr5_4:6626708-6626727 | Msa0833470:intron | 20.0% |
!!! | ATTTGTTTGTGTTTTATACT+TGG | + | chr5_4:6626763-6626782 | None:intergenic | 20.0% |
!!! | GAACTTTTTTGAAATGAAAA+TGG | - | chr5_4:6627569-6627588 | Msa0833470:intron | 20.0% |
!!! | ATTTTTGTTTCTTAAAAGAG+CGG | + | chr5_4:6628041-6628060 | None:intergenic | 20.0% |
!! | AAAAAATAATTTATCACTCG+TGG | - | chr5_4:6628409-6628428 | Msa0833470:intron | 20.0% |
!! | AAAAATAATTTATCACTCGT+GGG | - | chr5_4:6628410-6628429 | Msa0833470:intron | 20.0% |
!!! | CTTTGTTATAAGTAGTTTTA+AGG | + | chr5_4:6628472-6628491 | None:intergenic | 20.0% |
!! | CTTAAAACTACTTATAACAA+AGG | - | chr5_4:6628470-6628489 | Msa0833470:intron | 20.0% |
!!! | AAAAACACATGTGATTTTTT+AGG | - | chr5_4:6628721-6628740 | Msa0833470:intron | 20.0% |
!!! | AAAACACATGTGATTTTTTA+GGG | - | chr5_4:6628722-6628741 | Msa0833470:intron | 20.0% |
!! | ATCTTAATCTTAATTGACTA+GGG | + | chr5_4:6628804-6628823 | None:intergenic | 20.0% |
!!! | TTATTTTAACATCAGCAATT+AGG | + | chr5_4:6628832-6628851 | None:intergenic | 20.0% |
!! | TAATTATATGAAGAATGAGT+GGG | + | chr5_4:6629040-6629059 | None:intergenic | 20.0% |
!! | TTAATTATATGAAGAATGAG+TGG | + | chr5_4:6629041-6629060 | None:intergenic | 20.0% |
!!! | CTCTGTTTGTTTAAAATAAA+TGG | - | chr5_4:6629370-6629389 | Msa0833470:intron | 20.0% |
!! | ATTAGTATTTAAAGGATTGA+TGG | + | chr5_4:6629588-6629607 | None:intergenic | 20.0% |
!! | ATAAACAAAACAAATTAGGA+AGG | + | chr5_4:6629906-6629925 | None:intergenic | 20.0% |
!!! | ACAAAATTAACCTCAAATTT+TGG | + | chr5_4:6629940-6629959 | None:intergenic | 20.0% |
!! | AAAACGTATTTAGTAGTTTA+AGG | + | chr5_4:6630042-6630061 | None:intergenic | 20.0% |
!! | AAACAAACAAACTAAGATTA+TGG | + | chr5_4:6630073-6630092 | None:intergenic | 20.0% |
!!! | TTAGATTGGATTTTAAATGT+TGG | - | chr5_4:6630185-6630204 | Msa0833470:intron | 20.0% |
!! | ATATTTCTCAACAACATTAT+TGG | + | chr5_4:6630556-6630575 | None:intergenic | 20.0% |
!!! | AAAGTAAGTTTTGAATTAGA+TGG | + | chr5_4:6630724-6630743 | None:intergenic | 20.0% |
!! | ATTGTAAATGAGACTATAAT+AGG | + | chr5_4:6630769-6630788 | None:intergenic | 20.0% |
!! | ATTATATTAGTAGTTGGATT+TGG | - | chr5_4:6631516-6631535 | Msa0833470:intron | 20.0% |
!! | TTATATTAGTAGTTGGATTT+GGG | - | chr5_4:6631517-6631536 | Msa0833470:intron | 20.0% |
!! | CAAGAATTCTAAATTACTTT+AGG | - | chr5_4:6631569-6631588 | Msa0833470:intron | 20.0% |
!!! | GGTTTTTATTGTTTTTGTTT+TGG | - | chr5_4:6631590-6631609 | Msa0833470:intron | 20.0% |
!! | TTGAATAATAAGGGTAAATA+TGG | - | chr5_4:6631937-6631956 | Msa0833470:intron | 20.0% |
!! | AATATCAAAACTTAATACGT+AGG | + | chr5_4:6632171-6632190 | None:intergenic | 20.0% |
!!! | TGCTAATTTTATTTCTAAGA+TGG | - | chr5_4:6626096-6626115 | Msa0833470:CDS | 20.0% |
! | TTTAGTAGGAATAGATTTCT+TGG | - | chr5_4:6625988-6626007 | Msa0833470:CDS | 25.0% |
!!! | TTTATTTCTAAGATGGATTC+TGG | - | chr5_4:6626103-6626122 | Msa0833470:CDS | 25.0% |
!! | ATATGATTTGGATGTTGTAT+TGG | + | chr5_4:6626377-6626396 | None:intergenic | 25.0% |
! | TTCAACCGTATTTACAAAAA+AGG | + | chr5_4:6626409-6626428 | None:intergenic | 25.0% |
!! | TCTAAGTTGACTTTAATGTA+TGG | - | chr5_4:6626585-6626604 | Msa0833470:intron | 25.0% |
!!! | CTTTTTCAAACATGTTATAG+GGG | - | chr5_4:6626709-6626728 | Msa0833470:intron | 25.0% |
! | CTTGGTGAAATAGAAATTAT+GGG | + | chr5_4:6626745-6626764 | None:intergenic | 25.0% |
!! | ACTTGGTGAAATAGAAATTA+TGG | + | chr5_4:6626746-6626765 | None:intergenic | 25.0% |
! | ATAGTGATACCTCTTAAAAA+AGG | - | chr5_4:6627032-6627051 | Msa0833470:intron | 25.0% |
!!! | TAGCATTTTCCTTTTTTAAG+AGG | + | chr5_4:6627044-6627063 | None:intergenic | 25.0% |
!!! | AAAAGTTTTGTTTGAGTTCA+AGG | - | chr5_4:6627095-6627114 | Msa0833470:intron | 25.0% |
!! | TTCATGGTGATTTTTCTTAT+AGG | + | chr5_4:6627387-6627406 | None:intergenic | 25.0% |
! | TTAGTTGCAAGAAAATGATA+AGG | - | chr5_4:6627632-6627651 | Msa0833470:intron | 25.0% |
! | CAGAAATTATTGTGAATCTA+TGG | - | chr5_4:6627819-6627838 | Msa0833470:intron | 25.0% |
! | TAAAGCTTAAAACCTTATGT+TGG | - | chr5_4:6628062-6628081 | Msa0833470:intron | 25.0% |
! | AACATAAGCTTAATATGGAA+CGG | + | chr5_4:6628249-6628268 | None:intergenic | 25.0% |
! | AAGCAAACATAAGCTTAATA+TGG | + | chr5_4:6628254-6628273 | None:intergenic | 25.0% |
! | CCTCTTAAAAATAACATTCA+TGG | + | chr5_4:6628510-6628529 | None:intergenic | 25.0% |
!!! | CCATGAATGTTATTTTTAAG+AGG | - | chr5_4:6628507-6628526 | Msa0833470:intron | 25.0% |
!! | TTGATTTTGTCATCGAAAAA+AGG | - | chr5_4:6628531-6628550 | Msa0833470:intron | 25.0% |
! | ATTGTGTACTCAAATGATTT+AGG | - | chr5_4:6628635-6628654 | Msa0833470:intron | 25.0% |
! | TTGTGTACTCAAATGATTTA+GGG | - | chr5_4:6628636-6628655 | Msa0833470:intron | 25.0% |
!!! | AAACACATGTGATTTTTTAG+GGG | - | chr5_4:6628723-6628742 | Msa0833470:intron | 25.0% |
! | CTGTGTGAATATAAATATAG+AGG | - | chr5_4:6628764-6628783 | Msa0833470:intron | 25.0% |
! | TGAATATAAATATAGAGGCA+TGG | - | chr5_4:6628769-6628788 | Msa0833470:intron | 25.0% |
! | CATCTTAATCTTAATTGACT+AGG | + | chr5_4:6628805-6628824 | None:intergenic | 25.0% |
! | CTGATGTTAAAATAACACAA+TGG | - | chr5_4:6628837-6628856 | Msa0833470:intron | 25.0% |
!! | TAAATGGTCAATGTTTTCTT+GGG | + | chr5_4:6628914-6628933 | None:intergenic | 25.0% |
!!! | TCTTTTTTCACAAAGAAACT+TGG | + | chr5_4:6628987-6629006 | None:intergenic | 25.0% |
! | AATTATATGAAGAATGAGTG+GGG | + | chr5_4:6629039-6629058 | None:intergenic | 25.0% |
!! | TTCATTTGACAATTTTCTTC+TGG | - | chr5_4:6629135-6629154 | Msa0833470:intron | 25.0% |
! | CATCAATTAAATTCTCATGA+AGG | - | chr5_4:6629272-6629291 | Msa0833470:intron | 25.0% |
! | AATTAAATTCTCATGAAGGA+GGG | - | chr5_4:6629276-6629295 | Msa0833470:intron | 25.0% |
!!! | AAAAGGGTATGCAATTTTAT+CGG | + | chr5_4:6629529-6629548 | None:intergenic | 25.0% |
!!! | GGATTAGTCTTTTTACAAAA+GGG | + | chr5_4:6629545-6629564 | None:intergenic | 25.0% |
!!! | TGGATTAGTCTTTTTACAAA+AGG | + | chr5_4:6629546-6629565 | None:intergenic | 25.0% |
! | TTAAACAAATGTTTACGACA+AGG | - | chr5_4:6629674-6629693 | Msa0833470:intron | 25.0% |
! | TGAATCATTAACAATGTCTT+TGG | - | chr5_4:6629859-6629878 | Msa0833470:intron | 25.0% |
!!! | ATTTTAAGACTCGGAAAAAA+CGG | + | chr5_4:6630100-6630119 | None:intergenic | 25.0% |
! | TAAAATTGACGGAAAAAATG+AGG | - | chr5_4:6630114-6630133 | Msa0833470:intron | 25.0% |
! | CAATGAATCAACAATATCAT+TGG | + | chr5_4:6630356-6630375 | None:intergenic | 25.0% |
!!! | TACATTTTATCATTGATTCC+TGG | - | chr5_4:6630382-6630401 | Msa0833470:intron | 25.0% |
!!! | AAGTATATTTTTTTCTCACC+AGG | + | chr5_4:6630403-6630422 | None:intergenic | 25.0% |
!! | ATATTTTCATCATGTGTAGA+CGG | + | chr5_4:6630439-6630458 | None:intergenic | 25.0% |
! | AGAAATATTGATCAACCATT+AGG | - | chr5_4:6630568-6630587 | Msa0833470:intron | 25.0% |
! | GATAAATCAAGACACAATAT+TGG | - | chr5_4:6630658-6630677 | Msa0833470:intron | 25.0% |
! | AACTATCCATGTGAAAATAT+GGG | + | chr5_4:6630850-6630869 | None:intergenic | 25.0% |
! | TAACTATCCATGTGAAAATA+TGG | + | chr5_4:6630851-6630870 | None:intergenic | 25.0% |
! | AGACAACATTATAAGTTTGT+TGG | + | chr5_4:6630947-6630966 | None:intergenic | 25.0% |
! | AATTTATTCTATTTCATGGC+AGG | - | chr5_4:6631353-6631372 | Msa0833470:intron | 25.0% |
! | AATGTGCATATTATTTCCTA+AGG | - | chr5_4:6631489-6631508 | Msa0833470:intron | 25.0% |
! | TACTAATATAATTTCGCCTT+AGG | + | chr5_4:6631508-6631527 | None:intergenic | 25.0% |
! | AAATTGACTGTAATAAAGAG+TGG | - | chr5_4:6631763-6631782 | Msa0833470:intron | 25.0% |
!!! | AGCTTTTGCTTTGAATAATA+AGG | - | chr5_4:6631927-6631946 | Msa0833470:intron | 25.0% |
!!! | GCTTTTGCTTTGAATAATAA+GGG | - | chr5_4:6631928-6631947 | Msa0833470:intron | 25.0% |
! | ATATATAGATCCATCATAAG+AGG | - | chr5_4:6632363-6632382 | Msa0833470:intron | 25.0% |
! | TATATAGATCCATCATAAGA+GGG | - | chr5_4:6632364-6632383 | Msa0833470:intron | 25.0% |
! | TCATATAAGTTGTCACAAAA+TGG | + | chr5_4:6632426-6632445 | None:intergenic | 25.0% |
!!! | TCACAAAAGTTGTTGATTTT+TGG | - | chr5_4:6632543-6632562 | Msa0833470:intron | 25.0% |
!!! | ACATTTGACTTTTCATCTTT+GGG | + | chr5_4:6632691-6632710 | None:intergenic | 25.0% |
! | TTTGATTGGAATAGATTTCT+TGG | - | chr5_4:6633220-6633239 | Msa0833470:CDS | 25.0% |
!!! | TTTATTTCTAAGATGGATTC+TGG | - | chr5_4:6626103-6626122 | Msa0833470:CDS | 25.0% |
! | TGAAAGACATGAAACTTGTT+TGG | - | chr5_4:6625639-6625658 | Msa0833470:CDS | 30.0% |
ATCAGAGTATGCAAAAAACA+TGG | - | chr5_4:6625907-6625926 | Msa0833470:CDS | 30.0% | |
TCAGAGTATGCAAAAAACAT+GGG | - | chr5_4:6625908-6625927 | Msa0833470:CDS | 30.0% | |
!! | ATTTCTTGGTTGTTGATTCT+CGG | - | chr5_4:6626002-6626021 | Msa0833470:CDS | 30.0% |
!!! | AAGATTTTACAAGAGTGTTG+AGG | - | chr5_4:6626029-6626048 | Msa0833470:CDS | 30.0% |
! | TTAGCAAAGTTGAGTTGTAA+AGG | - | chr5_4:6626052-6626071 | Msa0833470:CDS | 30.0% |
! | AGATGGATTCTGGTTATATA+TGG | - | chr5_4:6626113-6626132 | Msa0833470:CDS | 30.0% |
! | CACGTGTTATTCATAATAGA+TGG | - | chr5_4:6626269-6626288 | Msa0833470:CDS | 30.0% |
TTGATCATGATTATGGATAG+TGG | - | chr5_4:6626475-6626494 | Msa0833470:intron | 30.0% | |
AAGATGCTAGATAAATGTAG+CGG | + | chr5_4:6626558-6626577 | None:intergenic | 30.0% | |
GAAGATATATAATGCTCTTG+AGG | + | chr5_4:6626641-6626660 | None:intergenic | 30.0% | |
GTACAAGTTATTAGTAACCA+GGG | + | chr5_4:6626671-6626690 | None:intergenic | 30.0% | |
TGTACAAGTTATTAGTAACC+AGG | + | chr5_4:6626672-6626691 | None:intergenic | 30.0% | |
ACATGTTATAGGGGTTAAAT+TGG | - | chr5_4:6626718-6626737 | Msa0833470:intron | 30.0% | |
CATGTTATAGGGGTTAAATT+GGG | - | chr5_4:6626719-6626738 | Msa0833470:intron | 30.0% | |
AGGAAAAAAATGGACATCTT+GGG | - | chr5_4:6626962-6626981 | Msa0833470:intron | 30.0% | |
!!! | AGGCATTTTGATTTTAGGTT+TGG | - | chr5_4:6626988-6627007 | Msa0833470:intron | 30.0% |
!!! | GGTAACCTTTTTTGAAGTAA+GGG | + | chr5_4:6627283-6627302 | None:intergenic | 30.0% |
CTTACTTCAAAAAAGGTTAC+CGG | - | chr5_4:6627282-6627301 | Msa0833470:intron | 30.0% | |
GATTATAGTGAAGGTTTGAT+GGG | + | chr5_4:6627453-6627472 | None:intergenic | 30.0% | |
TGATTATAGTGAAGGTTTGA+TGG | + | chr5_4:6627454-6627473 | None:intergenic | 30.0% | |
! | TATTTTCACACTATCTTCAC+CGG | + | chr5_4:6627861-6627880 | None:intergenic | 30.0% |
TGAAGATAGTGTGAAAATAG+TGG | - | chr5_4:6627862-6627881 | Msa0833470:intron | 30.0% | |
TAGTGTGAAAATAGTGGTAA+TGG | - | chr5_4:6627868-6627887 | Msa0833470:intron | 30.0% | |
GTGTTAGAAATAAAGAGAAC+CGG | - | chr5_4:6627934-6627953 | Msa0833470:intron | 30.0% | |
TTGAACACTCGATTGAATAA+TGG | + | chr5_4:6627988-6628007 | None:intergenic | 30.0% | |
GTTGCATTCAATTATTGGAA+CGG | + | chr5_4:6628105-6628124 | None:intergenic | 30.0% | |
TTGACGTTGCATTCAATTAT+TGG | + | chr5_4:6628110-6628129 | None:intergenic | 30.0% | |
ACATAAGCTTAATATGGAAC+GGG | + | chr5_4:6628248-6628267 | None:intergenic | 30.0% | |
! | GTAGTTAGAATTGATTCTAG+AGG | - | chr5_4:6628285-6628304 | Msa0833470:intron | 30.0% |
TTGATTCTAACTCGATGTTA+TGG | - | chr5_4:6628348-6628367 | Msa0833470:intron | 30.0% | |
AAATAACACAATGGATGAGA+CGG | - | chr5_4:6628846-6628865 | Msa0833470:intron | 30.0% | |
! | CTAAATGGTCAATGTTTTCT+TGG | + | chr5_4:6628915-6628934 | None:intergenic | 30.0% |
CAAGAAAACATTGACCATTT+AGG | - | chr5_4:6628913-6628932 | Msa0833470:intron | 30.0% | |
AAAACATTGACCATTTAGGA+AGG | - | chr5_4:6628917-6628936 | Msa0833470:intron | 30.0% | |
AAACATTGACCATTTAGGAA+GGG | - | chr5_4:6628918-6628937 | Msa0833470:intron | 30.0% | |
!! | TGTCTTTAGGATTAATTCAG+AGG | + | chr5_4:6629079-6629098 | None:intergenic | 30.0% |
CTGAATTAATCCTAAAGACA+AGG | - | chr5_4:6629079-6629098 | Msa0833470:intron | 30.0% | |
AAGAAATAGACCTTGTCTTT+AGG | + | chr5_4:6629092-6629111 | None:intergenic | 30.0% | |
TTGCTGGGAATAATCTTAAA+CGG | - | chr5_4:6629110-6629129 | Msa0833470:intron | 30.0% | |
!! | TTTTTCGAATTTGCATGTTC+TGG | - | chr5_4:6629159-6629178 | Msa0833470:intron | 30.0% |
CAATTAAATTCTCATGAAGG+AGG | - | chr5_4:6629275-6629294 | Msa0833470:intron | 30.0% | |
ATGGCATGAATTTATAAGCA+GGG | + | chr5_4:6629569-6629588 | None:intergenic | 30.0% | |
!!! | TTTTTTGGAGCCAAAATTTG+AGG | - | chr5_4:6629927-6629946 | Msa0833470:intron | 30.0% |
TTTCCGAGTCTTAAAATTGA+CGG | - | chr5_4:6630103-6630122 | Msa0833470:intron | 30.0% | |
!!! | TTTCCGTCAATTTTAAGACT+CGG | + | chr5_4:6630109-6630128 | None:intergenic | 30.0% |
AAGTCAAAGAGTTCTTAGAT+TGG | - | chr5_4:6630171-6630190 | Msa0833470:intron | 30.0% | |
! | TGGATTTTAAATGTTGGAGA+TGG | - | chr5_4:6630191-6630210 | Msa0833470:intron | 30.0% |
CAATTATGAGGAAGTTGAAA+TGG | - | chr5_4:6630229-6630248 | Msa0833470:intron | 30.0% | |
GAAGTTGAAATGGAAATAGA+TGG | - | chr5_4:6630239-6630258 | Msa0833470:intron | 30.0% | |
GAATCAACAATATCATTGGT+AGG | + | chr5_4:6630352-6630371 | None:intergenic | 30.0% | |
TTGAGATTTAACTCATGGTT+CGG | + | chr5_4:6630523-6630542 | None:intergenic | 30.0% | |
ACCATTAGGATTATATGCAA+TGG | - | chr5_4:6630582-6630601 | Msa0833470:intron | 30.0% | |
CCATTAGGATTATATGCAAT+GGG | - | chr5_4:6630583-6630602 | Msa0833470:intron | 30.0% | |
CATTAGGATTATATGCAATG+GGG | - | chr5_4:6630584-6630603 | Msa0833470:intron | 30.0% | |
AAGACACAATATTGGACAAA+AGG | - | chr5_4:6630666-6630685 | Msa0833470:intron | 30.0% | |
!!! | AGTTTTGAATTAGATGGAGA+TGG | + | chr5_4:6630718-6630737 | None:intergenic | 30.0% |
! | CATTTTTAACAGATTGTCCT+TGG | + | chr5_4:6630807-6630826 | None:intergenic | 30.0% |
GGACAATCTGTTAAAAATGT+TGG | - | chr5_4:6630808-6630827 | Msa0833470:intron | 30.0% | |
TTGTCTACAAAGAAGTCTTT+CGG | - | chr5_4:6630961-6630980 | Msa0833470:intron | 30.0% | |
! | AGTCTTTCGGAATTTAAGAT+AGG | - | chr5_4:6630974-6630993 | Msa0833470:intron | 30.0% |
ATTGGAATTAGCAAAAGTCA+TGG | - | chr5_4:6631406-6631425 | Msa0833470:intron | 30.0% | |
TCAACTCTTAACACTTGAAT+TGG | + | chr5_4:6631450-6631469 | None:intergenic | 30.0% | |
!! | TCAAGTGTTAAGAGTTGATA+CGG | - | chr5_4:6631452-6631471 | Msa0833470:intron | 30.0% |
GGCGAAATTATATTAGTAGT+TGG | - | chr5_4:6631510-6631529 | Msa0833470:intron | 30.0% | |
TTGACAAAAAAAGCTCTGTT+TGG | + | chr5_4:6632087-6632106 | None:intergenic | 30.0% | |
!!! | AGAGCTAAAAGCTCTTTTTT+TGG | - | chr5_4:6632130-6632149 | Msa0833470:intron | 30.0% |
!!! | GAGCTAAAAGCTCTTTTTTT+GGG | - | chr5_4:6632131-6632150 | Msa0833470:intron | 30.0% |
!! | GATCATTACTTTTCTTCAAG+TGG | + | chr5_4:6632279-6632298 | None:intergenic | 30.0% |
AATATTCATACCCTTTCTGT+TGG | + | chr5_4:6632328-6632347 | None:intergenic | 30.0% | |
TTACTTTCTCTCTATTGCTT+TGG | - | chr5_4:6632477-6632496 | Msa0833470:intron | 30.0% | |
!! | TCTCCTTTTCCTTTGAAAAT+TGG | - | chr5_4:6632514-6632533 | Msa0833470:intron | 30.0% |
!! | GACATTTGACTTTTCATCTT+TGG | + | chr5_4:6632692-6632711 | None:intergenic | 30.0% |
TTATATTTATGGGTGTGTGA+TGG | + | chr5_4:6632720-6632739 | None:intergenic | 30.0% | |
!! | GTGTAGTGGGTTATATTTAT+GGG | + | chr5_4:6632730-6632749 | None:intergenic | 30.0% |
! | TGAAAGACATGAAACTTGTT+TGG | - | chr5_4:6625639-6625658 | Msa0833470:CDS | 30.0% |
!! | ATTTCTTGGTTGTTGATTCT+CGG | - | chr5_4:6626002-6626021 | Msa0833470:CDS | 30.0% |
!!! | AAGATTTTACAAGAGTGTTG+AGG | - | chr5_4:6626029-6626048 | Msa0833470:CDS | 30.0% |
! | AGATGGATTCTGGTTATATA+TGG | - | chr5_4:6626113-6626132 | Msa0833470:CDS | 30.0% |
! | AATTCATATGGCACACTTTT+CGG | - | chr5_4:6633433-6633452 | Msa0833470:CDS | 30.0% |
ATGAATTAGTTGCTCTCTCT+GGG | + | chr5_4:6625667-6625686 | None:intergenic | 35.0% | |
TATGAATTAGTTGCTCTCTC+TGG | + | chr5_4:6625668-6625687 | None:intergenic | 35.0% | |
TGTGTATAGTTCCAGATGAA+CGG | - | chr5_4:6625879-6625898 | Msa0833470:CDS | 35.0% | |
GGATTAAGCATGTTGATCAA+CGG | - | chr5_4:6626290-6626309 | Msa0833470:CDS | 35.0% | |
TCTAATAAAGTGAACATCCC+CGG | + | chr5_4:6626317-6626336 | None:intergenic | 35.0% | |
ATATATCTTCTCTGATTCCC+TGG | - | chr5_4:6626651-6626670 | Msa0833470:intron | 35.0% | |
GCTTGATACGAGGAAAAAAA+TGG | - | chr5_4:6626952-6626971 | Msa0833470:intron | 35.0% | |
GAGGAAAAAAATGGACATCT+TGG | - | chr5_4:6626961-6626980 | Msa0833470:intron | 35.0% | |
!!! | GGACAAGGCATTTTGATTTT+AGG | - | chr5_4:6626983-6627002 | Msa0833470:intron | 35.0% |
TGAGTTCAAGGTTTGAACTT+AGG | - | chr5_4:6627107-6627126 | Msa0833470:intron | 35.0% | |
!!! | TTTTTGAAGTAAGGGTAACG+TGG | + | chr5_4:6627275-6627294 | None:intergenic | 35.0% |
CGTTACCCTTACTTCAAAAA+AGG | - | chr5_4:6627275-6627294 | Msa0833470:intron | 35.0% | |
!!! | CGGTAACCTTTTTTGAAGTA+AGG | + | chr5_4:6627284-6627303 | None:intergenic | 35.0% |
!! | AAAAAAGGTTACCGGTTTAC+AGG | - | chr5_4:6627290-6627309 | Msa0833470:intron | 35.0% |
AGAGAAAGTTGTTTGTCGTT+TGG | + | chr5_4:6627338-6627357 | None:intergenic | 35.0% | |
! | TTTTTCTTATAGGTACTCCC+AGG | + | chr5_4:6627377-6627396 | None:intergenic | 35.0% |
GTGGTAGAGATTAAAGTTCA+TGG | + | chr5_4:6627403-6627422 | None:intergenic | 35.0% | |
GACTTCGATGATTATAGTGA+AGG | + | chr5_4:6627462-6627481 | None:intergenic | 35.0% | |
ATCTCAAAAAACAAAGGACG+AGG | + | chr5_4:6627495-6627514 | None:intergenic | 35.0% | |
!! | AGAGGCATCTCAAAAAACAA+AGG | + | chr5_4:6627501-6627520 | None:intergenic | 35.0% |
!!! | TGTTTTTTGAGATGCCTCTT+AGG | - | chr5_4:6627502-6627521 | Msa0833470:intron | 35.0% |
CATGAATGATTACAAGGATG+AGG | + | chr5_4:6627533-6627552 | None:intergenic | 35.0% | |
CTCATCCTTGTAATCATTCA+TGG | - | chr5_4:6627531-6627550 | Msa0833470:intron | 35.0% | |
TGTGACCATGAATGATTACA+AGG | + | chr5_4:6627539-6627558 | None:intergenic | 35.0% | |
! | TGGCATGAACAATGTTTTTC+CGG | - | chr5_4:6627839-6627858 | Msa0833470:intron | 35.0% |
AATTCTAACTACTCCAAACG+TGG | + | chr5_4:6628277-6628296 | None:intergenic | 35.0% | |
!!! | TTTTTTGCGTTAGAGAGAGA+AGG | - | chr5_4:6628372-6628391 | Msa0833470:intron | 35.0% |
TAATTTATCACTCGTGGGAT+TGG | - | chr5_4:6628415-6628434 | Msa0833470:intron | 35.0% | |
TGTACTCAAATGATTTAGGG+AGG | - | chr5_4:6628639-6628658 | Msa0833470:intron | 35.0% | |
AATGATTTAGGGAGGTTCAA+TGG | - | chr5_4:6628647-6628666 | Msa0833470:intron | 35.0% | |
AACATTGACCATTTAGGAAG+GGG | - | chr5_4:6628919-6628938 | Msa0833470:intron | 35.0% | |
! | AGTCTTGCATCTTTAAGAAC+AGG | - | chr5_4:6629200-6629219 | Msa0833470:intron | 35.0% |
GAGGGTTTAGCATATGAAAT+TGG | - | chr5_4:6629335-6629354 | Msa0833470:intron | 35.0% | |
GATGGCATGAATTTATAAGC+AGG | + | chr5_4:6629570-6629589 | None:intergenic | 35.0% | |
GAAAAAATGAGGCTTCAAAC+TGG | - | chr5_4:6630125-6630144 | Msa0833470:intron | 35.0% | |
AATGTTGGAGATGGAAACAT+CGG | - | chr5_4:6630200-6630219 | Msa0833470:intron | 35.0% | |
CATCGGAGAAAACAATTATG+AGG | - | chr5_4:6630217-6630236 | Msa0833470:intron | 35.0% | |
GATCACCAATTAAAGCAACA+TGG | + | chr5_4:6630289-6630308 | None:intergenic | 35.0% | |
GAACCATGAGTTAAATCTCA+AGG | - | chr5_4:6630522-6630541 | Msa0833470:intron | 35.0% | |
CAACCTTGAGATTTAACTCA+TGG | + | chr5_4:6630528-6630547 | None:intergenic | 35.0% | |
CATGAGTTAAATCTCAAGGT+TGG | - | chr5_4:6630526-6630545 | Msa0833470:intron | 35.0% | |
CCCATTGCATATAATCCTAA+TGG | + | chr5_4:6630586-6630605 | None:intergenic | 35.0% | |
ATATGCAATGGGGAATTTGA+CGG | - | chr5_4:6630594-6630613 | Msa0833470:intron | 35.0% | |
ACGGGGATTATATCCAATAA+TGG | - | chr5_4:6630613-6630632 | Msa0833470:intron | 35.0% | |
CGGGGATTATATCCAATAAT+GGG | - | chr5_4:6630614-6630633 | Msa0833470:intron | 35.0% | |
ATGGAGTCAAAGTCAATCTT+TGG | + | chr5_4:6630699-6630718 | None:intergenic | 35.0% | |
ATGACTATCAATAAGAGCCA+AGG | - | chr5_4:6630787-6630806 | Msa0833470:intron | 35.0% | |
! | CCATGTGAAAATATGGGTTT+TGG | + | chr5_4:6630844-6630863 | None:intergenic | 35.0% |
! | CCAAAACCCATATTTTCACA+TGG | - | chr5_4:6630841-6630860 | Msa0833470:intron | 35.0% |
!!! | GTGCATCTAGCTGTTTTTAA+AGG | - | chr5_4:6631046-6631065 | Msa0833470:intron | 35.0% |
GATGTACGGGAAGTAAATTA+TGG | + | chr5_4:6631681-6631700 | None:intergenic | 35.0% | |
! | GATAAGCTAGTTGAAGTGTT+TGG | - | chr5_4:6631890-6631909 | Msa0833470:intron | 35.0% |
ACGAGCTTATAGCTTATTTC+AGG | + | chr5_4:6632038-6632057 | None:intergenic | 35.0% | |
!!! | TTGGTGGTTTTGGAATTTAG+TGG | + | chr5_4:6632309-6632328 | None:intergenic | 35.0% |
! | CCACCAATTTTCAAAGGAAA+AGG | + | chr5_4:6632520-6632539 | None:intergenic | 35.0% |
!! | CCTTTTCCTTTGAAAATTGG+TGG | - | chr5_4:6632517-6632536 | Msa0833470:intron | 35.0% |
! | TGACAACCACCAATTTTCAA+AGG | + | chr5_4:6632526-6632545 | None:intergenic | 35.0% |
GGCTATATTTCGTAACGTAT+TGG | + | chr5_4:6632670-6632689 | None:intergenic | 35.0% | |
!! | GGTGTAGTGGGTTATATTTA+TGG | + | chr5_4:6632731-6632750 | None:intergenic | 35.0% |
TGTTGTGTTTGTGTTTGTGT+TGG | + | chr5_4:6632781-6632800 | None:intergenic | 35.0% | |
! | AAGGTGATTGATGGTAGTTA+TGG | + | chr5_4:6632943-6632962 | None:intergenic | 35.0% |
ATAGTAGAAACATGGTCACA+CGG | - | chr5_4:6633026-6633045 | Msa0833470:CDS | 35.0% | |
ATCGGAGTATGCAAAAAACA+TGG | - | chr5_4:6633139-6633158 | Msa0833470:intron | 35.0% | |
TCGGAGTATGCAAAAAACAT+GGG | - | chr5_4:6633140-6633159 | Msa0833470:intron | 35.0% | |
CTTGCAAAGTTGAGTAGTAA+AGG | - | chr5_4:6633284-6633303 | Msa0833470:CDS | 35.0% | |
! | TGGATTCTGGTTATATATGG+CGG | - | chr5_4:6626116-6626135 | Msa0833470:CDS | 35.0% |
TGAATTAGTTGCTCTCTCTG+GGG | + | chr5_4:6625666-6625685 | None:intergenic | 40.0% | |
AGATTCACTGACAAGGTGAT+TGG | + | chr5_4:6625723-6625742 | None:intergenic | 40.0% | |
AATCACCTTGTCAGTGAATC+TGG | - | chr5_4:6625722-6625741 | Msa0833470:CDS | 40.0% | |
CTCAGCTGATAGTAGAAACA+TGG | - | chr5_4:6625786-6625805 | Msa0833470:CDS | 40.0% | |
ATAGTAGAAACATGGTCCCA+TGG | - | chr5_4:6625794-6625813 | Msa0833470:CDS | 40.0% | |
ATGGATAAACCAACACTCGT+TGG | + | chr5_4:6625830-6625849 | None:intergenic | 40.0% | |
!! | GAAGTGATGGATGGTTTAGT+AGG | - | chr5_4:6625974-6625993 | Msa0833470:CDS | 40.0% |
TTATATATGGCGAAGCGTAG+TGG | - | chr5_4:6626126-6626145 | Msa0833470:CDS | 40.0% | |
!!! | GTTGGTTTTGGGATTGGTTT+AGG | + | chr5_4:6626816-6626835 | None:intergenic | 40.0% |
TATGGTCTTCAGTCTTCACA+TGG | + | chr5_4:6626847-6626866 | None:intergenic | 40.0% | |
TGTGAAGACTGAAGACCATA+AGG | - | chr5_4:6626847-6626866 | Msa0833470:intron | 40.0% | |
AATTGCAGAGAGCTCAACAT+TGG | - | chr5_4:6626870-6626889 | Msa0833470:intron | 40.0% | |
!! | TTCTTTAGTTGCTGGCTTCT+TGG | + | chr5_4:6626927-6626946 | None:intergenic | 40.0% |
AGCCAGCAACTAAAGAAACA+AGG | - | chr5_4:6626930-6626949 | Msa0833470:intron | 40.0% | |
!! | AGCCTTGTTTCTTTAGTTGC+TGG | + | chr5_4:6626935-6626954 | None:intergenic | 40.0% |
AAGAAACAAGGCTTGATACG+AGG | - | chr5_4:6626942-6626961 | Msa0833470:intron | 40.0% | |
AAAATGGACATCTTGGGACA+AGG | - | chr5_4:6626968-6626987 | Msa0833470:intron | 40.0% | |
! | GAGGCGTTCATCTTAATTTG+TGG | - | chr5_4:6627177-6627196 | Msa0833470:intron | 40.0% |
AACTTGCATAGCCTGTAAAC+CGG | + | chr5_4:6627304-6627323 | None:intergenic | 40.0% | |
! | TTTTCCAAAGACTACAGCCT+GGG | - | chr5_4:6627357-6627376 | Msa0833470:intron | 40.0% |
TTCATGGTCACACATGAAGA+TGG | - | chr5_4:6627547-6627566 | Msa0833470:intron | 40.0% | |
TATCTACCCTTCACGAATCT+GGG | - | chr5_4:6627788-6627807 | Msa0833470:intron | 40.0% | |
ATCACTCAATTCTTGGCTAC+CGG | + | chr5_4:6627956-6627975 | None:intergenic | 40.0% | |
CAATTATTGGAACGGTCCAA+GGG | + | chr5_4:6628097-6628116 | None:intergenic | 40.0% | |
TCAATTATTGGAACGGTCCA+AGG | + | chr5_4:6628098-6628117 | None:intergenic | 40.0% | |
CTTATGTTTGCTTCCACGTT+TGG | - | chr5_4:6628261-6628280 | Msa0833470:intron | 40.0% | |
CTATCCCACAATAAAAGCCT+CGG | + | chr5_4:6628444-6628463 | None:intergenic | 40.0% | |
ACATTGACCATTTAGGAAGG+GGG | - | chr5_4:6628920-6628939 | Msa0833470:intron | 40.0% | |
TAAACCCACCACTAACTTAG+CGG | + | chr5_4:6628951-6628970 | None:intergenic | 40.0% | |
! | AGACAAGGTCTATTTCTTGC+TGG | - | chr5_4:6629094-6629113 | Msa0833470:intron | 40.0% |
! | GACAAGGTCTATTTCTTGCT+GGG | - | chr5_4:6629095-6629114 | Msa0833470:intron | 40.0% |
!!! | TGAAGGAGGGTTTTGTTAGT+CGG | - | chr5_4:6629289-6629308 | Msa0833470:intron | 40.0% |
! | GGTATGCAATTTTATCGGCA+AGG | + | chr5_4:6629524-6629543 | None:intergenic | 40.0% |
GCATGAATTTATAAGCAGGG+TGG | + | chr5_4:6629566-6629585 | None:intergenic | 40.0% | |
GACTTCATTGACATCAGAAC+AGG | + | chr5_4:6630156-6630175 | None:intergenic | 40.0% | |
GGTATGTTGATCGAGATTTC+AGG | - | chr5_4:6630260-6630279 | Msa0833470:intron | 40.0% | |
!! | GGTGACCATGTTGCTTTAAT+TGG | - | chr5_4:6630281-6630300 | Msa0833470:intron | 40.0% |
TTGACGGTGTTCAGAAATTC+TGG | + | chr5_4:6630487-6630506 | None:intergenic | 40.0% | |
TGAACACCGTCAAATCTTCT+GGG | - | chr5_4:6630494-6630513 | Msa0833470:intron | 40.0% | |
TATGCAATGGGGAATTTGAC+GGG | - | chr5_4:6630595-6630614 | Msa0833470:intron | 40.0% | |
!! | ATGCTGATTTGCAAAGACGA+AGG | - | chr5_4:6630913-6630932 | Msa0833470:intron | 40.0% |
CGTAGTCATGAAAGATACCA+CGG | - | chr5_4:6631787-6631806 | Msa0833470:intron | 40.0% | |
! | AATTTTACCAAACAGAGCCG+TGG | + | chr5_4:6631807-6631826 | None:intergenic | 40.0% |
GTAACACGAAAAGCTCTGTT+TGG | + | chr5_4:6632065-6632084 | None:intergenic | 40.0% | |
CTTAATACGTAGGCTCTGTT+TGG | + | chr5_4:6632161-6632180 | None:intergenic | 40.0% | |
AATATCCAATCTCTGCAACC+TGG | - | chr5_4:6632234-6632253 | Msa0833470:intron | 40.0% | |
AATTGAAGTCTTTGTGGACC+AGG | + | chr5_4:6632255-6632274 | None:intergenic | 40.0% | |
AGTGGCAATTGAAGTCTTTG+TGG | + | chr5_4:6632261-6632280 | None:intergenic | 40.0% | |
TTCCAAAACCACCAACAGAA+AGG | - | chr5_4:6632314-6632333 | Msa0833470:intron | 40.0% | |
TCCAAAACCACCAACAGAAA+GGG | - | chr5_4:6632315-6632334 | Msa0833470:intron | 40.0% | |
ATTCATACCCTTTCTGTTGG+TGG | + | chr5_4:6632325-6632344 | None:intergenic | 40.0% | |
ATAGATCCATCATAAGAGGG+AGG | - | chr5_4:6632367-6632386 | Msa0833470:intron | 40.0% | |
TAGATCCATCATAAGAGGGA+GGG | - | chr5_4:6632368-6632387 | Msa0833470:intron | 40.0% | |
AGGAAAAGGAGATAGTGACA+CGG | + | chr5_4:6632506-6632525 | None:intergenic | 40.0% | |
! | CCGTTCTTCTCACATTTTCT+CGG | + | chr5_4:6632628-6632647 | None:intergenic | 40.0% |
CCGAGAAAATGTGAGAAGAA+CGG | - | chr5_4:6632625-6632644 | Msa0833470:intron | 40.0% | |
AAGTGTGGAATGGGAGAATT+GGG | + | chr5_4:6632752-6632771 | None:intergenic | 40.0% | |
AAAGTGTGGAATGGGAGAAT+TGG | + | chr5_4:6632753-6632772 | None:intergenic | 40.0% | |
TGGTCGTTAAAGTGTGGAAT+GGG | + | chr5_4:6632761-6632780 | None:intergenic | 40.0% | |
TTGGTCGTTAAAGTGTGGAA+TGG | + | chr5_4:6632762-6632781 | None:intergenic | 40.0% | |
! | TTGTGTTGGTCGTTAAAGTG+TGG | + | chr5_4:6632767-6632786 | None:intergenic | 40.0% |
ATGAGTTAGTTGCTCTCTCT+GGG | + | chr5_4:6632902-6632921 | None:intergenic | 40.0% | |
TATGAGTTAGTTGCTCTCTC+TGG | + | chr5_4:6632903-6632922 | None:intergenic | 40.0% | |
! | TTCTCTAGGAAGGTGATTGA+TGG | + | chr5_4:6632952-6632971 | None:intergenic | 40.0% |
AATCACCTTCCTAGAGAATC+CGG | - | chr5_4:6632954-6632973 | Msa0833470:CDS | 40.0% | |
CTCAGCTGATAGTAGAAACA+TGG | - | chr5_4:6625786-6625805 | Msa0833470:CDS | 40.0% | |
TGGATAAACCAACACTCGTT+GGG | + | chr5_4:6625829-6625848 | None:intergenic | 40.0% | |
ATGGATAAACCAACACTCGT+TGG | + | chr5_4:6625830-6625849 | None:intergenic | 40.0% | |
! | GTTGGTTTATCCATAGCAAG+CGG | - | chr5_4:6633068-6633087 | Msa0833470:CDS | 40.0% |
TGTGCATAGTTCCTGATGAA+CGG | - | chr5_4:6633111-6633130 | Msa0833470:CDS | 40.0% | |
!! | GAAGTGATGGATGGTTTGAT+TGG | - | chr5_4:6633206-6633225 | Msa0833470:CDS | 40.0% |
TGTTCGGTCAGTATTTCTTC+CGG | - | chr5_4:6633400-6633419 | Msa0833470:CDS | 40.0% | |
! | GACGTGCTGTTCATAATAGA+TGG | - | chr5_4:6633501-6633520 | Msa0833470:CDS | 40.0% |
AAGCATGTTGATCAACGATC+AGG | - | chr5_4:6633527-6633546 | Msa0833470:CDS | 40.0% | |
AGCATGTTGATCAACGATCA+GGG | - | chr5_4:6633528-6633547 | Msa0833470:CDS | 40.0% | |
CAGGGGATGTTCACTTTATT+AGG | - | chr5_4:6633546-6633565 | Msa0833470:CDS | 40.0% | |
TTCACTGACAAGGTGATTGG+TGG | + | chr5_4:6625720-6625739 | None:intergenic | 45.0% | |
! | GGAGTTTGTTTCAGCTATGG+CGG | - | chr5_4:6625751-6625770 | Msa0833470:CDS | 45.0% |
GGAGTTATTCCAACGAGTGT+TGG | - | chr5_4:6625818-6625837 | Msa0833470:CDS | 45.0% | |
TCTGATCTTGACCGTTCATC+TGG | + | chr5_4:6625893-6625912 | None:intergenic | 45.0% | |
GCAAAAAACATGGGAGAAGC+TGG | - | chr5_4:6625917-6625936 | Msa0833470:CDS | 45.0% | |
! | TGGTATGTCACCGGAAGTTT+TGG | - | chr5_4:6625937-6625956 | Msa0833470:CDS | 45.0% |
!! | ATGTCACCGGAAGTTTTGGT+AGG | - | chr5_4:6625941-6625960 | Msa0833470:CDS | 45.0% |
GGTTCTCCTACCAAAACTTC+CGG | + | chr5_4:6625950-6625969 | None:intergenic | 45.0% | |
!! | GGAAGTTTTGGTAGGAGAAC+CGG | - | chr5_4:6625949-6625968 | Msa0833470:CDS | 45.0% |
AAACCATCCATCACTTCCTC+CGG | + | chr5_4:6625971-6625990 | None:intergenic | 45.0% | |
ATATGAATTCCCTTCCCCAC+CGG | + | chr5_4:6626190-6626209 | None:intergenic | 45.0% | |
AAGCATGTTGATCAACGGTC+CGG | - | chr5_4:6626295-6626314 | Msa0833470:CDS | 45.0% | |
!!! | TGGGAAGTTGGTTTTGGGAT+TGG | + | chr5_4:6626822-6626841 | None:intergenic | 45.0% |
!!! | TGGTCTGGGAAGTTGGTTTT+GGG | + | chr5_4:6626827-6626846 | None:intergenic | 45.0% |
!! | ATGGTCTGGGAAGTTGGTTT+TGG | + | chr5_4:6626828-6626847 | None:intergenic | 45.0% |
CTTCAGTCTTCACATGGTCT+GGG | + | chr5_4:6626841-6626860 | None:intergenic | 45.0% | |
TCTTCAGTCTTCACATGGTC+TGG | + | chr5_4:6626842-6626861 | None:intergenic | 45.0% | |
GAGCTCTCTGCAATTCCTTA+TGG | + | chr5_4:6626865-6626884 | None:intergenic | 45.0% | |
AGAGAGCTCAACATTGGTGT+TGG | - | chr5_4:6626876-6626895 | Msa0833470:intron | 45.0% | |
ATAGGCGAGCGAGTGTTTAA+GGG | + | chr5_4:6627248-6627267 | None:intergenic | 45.0% | |
AATAGGCGAGCGAGTGTTTA+AGG | + | chr5_4:6627249-6627268 | None:intergenic | 45.0% | |
TAAGGGTAACGTGGCTCAAT+AGG | + | chr5_4:6627266-6627285 | None:intergenic | 45.0% | |
! | CTTTTCCAAAGACTACAGCC+TGG | - | chr5_4:6627356-6627375 | Msa0833470:intron | 45.0% |
! | CGATCTGAAGTAGGATGCTT+GGG | + | chr5_4:6627430-6627449 | None:intergenic | 45.0% |
! | TTTGATGGGCGATCTGAAGT+AGG | + | chr5_4:6627439-6627458 | None:intergenic | 45.0% |
AACAAAGGACGAGGAAGAGA+TGG | + | chr5_4:6627486-6627505 | None:intergenic | 45.0% | |
GTATCTACCCTTCACGAATC+TGG | - | chr5_4:6627787-6627806 | Msa0833470:intron | 45.0% | |
ATTGTGCCCAGATTCGTGAA+GGG | + | chr5_4:6627797-6627816 | None:intergenic | 45.0% | |
AATTGTGCCCAGATTCGTGA+AGG | + | chr5_4:6627798-6627817 | None:intergenic | 45.0% | |
CCACGTCATCACTCAATTCT+TGG | + | chr5_4:6627963-6627982 | None:intergenic | 45.0% | |
! | CCAAGAATTGAGTGATGACG+TGG | - | chr5_4:6627960-6627979 | Msa0833470:intron | 45.0% |
!! | TTCAAGAGCAAGTGCTGAAG+CGG | - | chr5_4:6628003-6628022 | Msa0833470:intron | 45.0% |
GGGTCAATCAGTCCAACATA+AGG | + | chr5_4:6628077-6628096 | None:intergenic | 45.0% | |
ATGTTGGACTGATTGACCCT+TGG | - | chr5_4:6628078-6628097 | Msa0833470:intron | 45.0% | |
! | GAGACCGAGGCTTTTATTGT+GGG | - | chr5_4:6628437-6628456 | Msa0833470:intron | 45.0% |
! | CGAGGCTTTTATTGTGGGAT+AGG | - | chr5_4:6628442-6628461 | Msa0833470:intron | 45.0% |
!! | AGACGGTGAACATTGATTCG+TGG | - | chr5_4:6628863-6628882 | Msa0833470:intron | 45.0% |
TGGGGTCGAAGTCTTTGTAA+AGG | + | chr5_4:6629021-6629040 | None:intergenic | 45.0% | |
ATCCTATCCGATTCAACACG+AGG | - | chr5_4:6629316-6629335 | Msa0833470:intron | 45.0% | |
TCCTATCCGATTCAACACGA+GGG | - | chr5_4:6629317-6629336 | Msa0833470:intron | 45.0% | |
GCTAAACCCTCGTGTTGAAT+CGG | + | chr5_4:6629326-6629345 | None:intergenic | 45.0% | |
! | TCTGGAGTGAGAATCTCATC+AGG | + | chr5_4:6630469-6630488 | None:intergenic | 45.0% |
CTGAACACCGTCAAATCTTC+TGG | - | chr5_4:6630493-6630512 | Msa0833470:intron | 45.0% | |
ATGCAATGGGGAATTTGACG+GGG | - | chr5_4:6630596-6630615 | Msa0833470:intron | 45.0% | |
TTTACTTCCCGTACATCGCA+CGG | - | chr5_4:6631684-6631703 | Msa0833470:intron | 45.0% | |
ATTTAGACCCGTGCGATGTA+CGG | + | chr5_4:6631695-6631714 | None:intergenic | 45.0% | |
AAAGATACCACGGCTCTGTT+TGG | - | chr5_4:6631797-6631816 | Msa0833470:intron | 45.0% | |
!!! | ACCCTTTCTGTTGGTGGTTT+TGG | + | chr5_4:6632319-6632338 | None:intergenic | 45.0% |
ATAGTCCCTCCCTCTTATGA+TGG | + | chr5_4:6632376-6632395 | None:intergenic | 45.0% | |
ATGGGAGAATTGGGTGTAGT+GGG | + | chr5_4:6632743-6632762 | None:intergenic | 45.0% | |
AATGGGAGAATTGGGTGTAG+TGG | + | chr5_4:6632744-6632763 | None:intergenic | 45.0% | |
TGAGTTAGTTGCTCTCTCTG+GGG | + | chr5_4:6632901-6632920 | None:intergenic | 45.0% | |
TCCTGATGAACGGTCAAGAT+CGG | - | chr5_4:6633121-6633140 | Msa0833470:intron | 45.0% | |
GCAAAAAACATGGGAGAAGC+TGG | - | chr5_4:6625917-6625936 | Msa0833470:CDS | 45.0% | |
! | TGGTATGTCACCGGAAGTTT+TGG | - | chr5_4:6625937-6625956 | Msa0833470:CDS | 45.0% |
!! | ATGTCACCGGAAGTTTTGGT+AGG | - | chr5_4:6625941-6625960 | Msa0833470:CDS | 45.0% |
GGTTCTCCTACCAAAACTTC+CGG | + | chr5_4:6625950-6625969 | None:intergenic | 45.0% | |
!! | GGAAGTTTTGGTAGGAGAAC+CGG | - | chr5_4:6625949-6625968 | Msa0833470:CDS | 45.0% |
AAACCATCCATCACTTCCTC+CGG | + | chr5_4:6625971-6625990 | None:intergenic | 45.0% | |
ATATGAATTCCCTTCCCCAC+CGG | + | chr5_4:6626190-6626209 | None:intergenic | 45.0% | |
! | TGGTGGTGACAACTCTGTTA+CGG | - | chr5_4:6633463-6633482 | Msa0833470:CDS | 45.0% |
TGTTACGGCGATGAAGCATA+AGG | - | chr5_4:6633478-6633497 | Msa0833470:CDS | 45.0% | |
GTTACGGCGATGAAGCATAA+GGG | - | chr5_4:6633479-6633498 | Msa0833470:CDS | 45.0% | |
GCATGTTGATCAACGATCAG+GGG | - | chr5_4:6633529-6633548 | Msa0833470:CDS | 45.0% | |
CCACACCAGATTCACTGACA+AGG | + | chr5_4:6625730-6625749 | None:intergenic | 50.0% | |
CCTTGTCAGTGAATCTGGTG+TGG | - | chr5_4:6625727-6625746 | Msa0833470:CDS | 50.0% | |
TGTCAGTGAATCTGGTGTGG+CGG | - | chr5_4:6625730-6625749 | Msa0833470:CDS | 50.0% | |
! | GGCGGAGTTTGTTTCAGCTA+TGG | - | chr5_4:6625748-6625767 | Msa0833470:CDS | 50.0% |
TTTGTTTCAGCTATGGCGGC+AGG | - | chr5_4:6625755-6625774 | Msa0833470:CDS | 50.0% | |
GTAGAAACATGGTCCCATGG+CGG | - | chr5_4:6625797-6625816 | Msa0833470:CDS | 50.0% | |
CGTTGGAATAACTCCGCCAT+GGG | + | chr5_4:6625813-6625832 | None:intergenic | 50.0% | |
TCGTTGGAATAACTCCGCCA+TGG | + | chr5_4:6625814-6625833 | None:intergenic | 50.0% | |
TCCATAGCATCACGTCACAC+AGG | - | chr5_4:6625845-6625864 | Msa0833470:CDS | 50.0% | |
ACCTGTGTGACGTGATGCTA+TGG | + | chr5_4:6625849-6625868 | None:intergenic | 50.0% | |
ATAGCATCACGTCACACAGG+TGG | - | chr5_4:6625848-6625867 | Msa0833470:CDS | 50.0% | |
!! | AGTTTTGGTAGGAGAACCGG+AGG | - | chr5_4:6625952-6625971 | Msa0833470:CDS | 50.0% |
! | TGTTCGGTCGGTGTTTCTTC+CGG | - | chr5_4:6626168-6626187 | Msa0833470:CDS | 50.0% |
GGTGGGGAAGGGAATTCATA+TGG | - | chr5_4:6626189-6626208 | Msa0833470:CDS | 50.0% | |
ATGGCGCATTTATCAGCTGC+CGG | - | chr5_4:6626208-6626227 | Msa0833470:CDS | 50.0% | |
AGCATGTTGATCAACGGTCC+GGG | - | chr5_4:6626296-6626315 | Msa0833470:CDS | 50.0% | |
CTTCACATGGTCTGGGAAGT+TGG | + | chr5_4:6626834-6626853 | None:intergenic | 50.0% | |
TGTTGGGATGACATGACACG+AGG | - | chr5_4:6627158-6627177 | Msa0833470:intron | 50.0% | |
TACTCCCAGGCTGTAGTCTT+TGG | + | chr5_4:6627364-6627383 | None:intergenic | 50.0% | |
!! | AGTAGGATGCTTGGGTTGAG+TGG | + | chr5_4:6627422-6627441 | None:intergenic | 50.0% |
! | GCGATCTGAAGTAGGATGCT+TGG | + | chr5_4:6627431-6627450 | None:intergenic | 50.0% |
AGGATGAGGAAGAGCCTAAG+AGG | + | chr5_4:6627519-6627538 | None:intergenic | 50.0% | |
CACGCTCAAATTACTGCGCT+CGG | + | chr5_4:6627604-6627623 | None:intergenic | 50.0% | |
! | GGAGACCGAGGCTTTTATTG+TGG | - | chr5_4:6628436-6628455 | Msa0833470:intron | 50.0% |
ATCCTCCGCTAAGTTAGTGG+TGG | - | chr5_4:6628943-6628962 | Msa0833470:intron | 50.0% | |
TCCTCCGCTAAGTTAGTGGT+GGG | - | chr5_4:6628944-6628963 | Msa0833470:intron | 50.0% | |
ACCCTCGTGTTGAATCGGAT+AGG | + | chr5_4:6629321-6629340 | None:intergenic | 50.0% | |
ACACGTGAAGTAACGCGTGA+AGG | + | chr5_4:6630883-6630902 | None:intergenic | 50.0% | |
TCACGCGTTACTTCACGTGT+TGG | - | chr5_4:6630883-6630902 | Msa0833470:intron | 50.0% | |
CACGCGTTACTTCACGTGTT+GGG | - | chr5_4:6630884-6630903 | Msa0833470:intron | 50.0% | |
TTACTTCCCGTACATCGCAC+GGG | - | chr5_4:6631685-6631704 | Msa0833470:intron | 50.0% | |
TTTAGACCCGTGCGATGTAC+GGG | + | chr5_4:6631694-6631713 | None:intergenic | 50.0% | |
TATCCTCTATGGCAGCAGGA+TGG | - | chr5_4:6632991-6633010 | Msa0833470:CDS | 50.0% | |
GTAGAAACATGGTCACACGG+CGG | - | chr5_4:6633029-6633048 | Msa0833470:CDS | 50.0% | |
GGAGTTATCCCAACGAGTGT+TGG | - | chr5_4:6633050-6633069 | Msa0833470:CDS | 50.0% | |
TCCGATCTTGACCGTTCATC+AGG | + | chr5_4:6633125-6633144 | None:intergenic | 50.0% | |
!! | AGTTTTGGTAGGAGAACCGG+AGG | - | chr5_4:6625952-6625971 | Msa0833470:CDS | 50.0% |
! | TGGTTATATATGGCGGAGCG+TGG | - | chr5_4:6633355-6633374 | Msa0833470:CDS | 50.0% |
! | TTATATATGGCGGAGCGTGG+TGG | - | chr5_4:6633358-6633377 | Msa0833470:CDS | 50.0% |
TCGGTCAGTATTTCTTCCGG+TGG | - | chr5_4:6633403-6633422 | Msa0833470:CDS | 50.0% | |
CGGTCAGTATTTCTTCCGGT+GGG | - | chr5_4:6633404-6633423 | Msa0833470:CDS | 50.0% | |
GGTCAGTATTTCTTCCGGTG+GGG | - | chr5_4:6633405-6633424 | Msa0833470:CDS | 50.0% | |
AGTATTTCTTCCGGTGGGGA+AGG | - | chr5_4:6633409-6633428 | Msa0833470:CDS | 50.0% | |
GTATTTCTTCCGGTGGGGAA+GGG | - | chr5_4:6633410-6633429 | Msa0833470:CDS | 50.0% | |
GGTGGGGAAGGGAATTCATA+TGG | - | chr5_4:6626189-6626208 | Msa0833470:CDS | 50.0% | |
AACAGAGTTGTCACCACCAC+CGG | + | chr5_4:6633462-6633481 | None:intergenic | 50.0% | |
TTTCAGCTATGGCGGCAGGA+TGG | - | chr5_4:6625759-6625778 | Msa0833470:CDS | 55.0% | |
GGGAGAAGCTGGTATGTCAC+CGG | - | chr5_4:6625928-6625947 | Msa0833470:CDS | 55.0% | |
AGGAGAACCGGAGGAAGTGA+TGG | - | chr5_4:6625961-6625980 | Msa0833470:CDS | 55.0% | |
! | GAACCGGAGGAAGTGATGGA+TGG | - | chr5_4:6625965-6625984 | Msa0833470:CDS | 55.0% |
GTGTTTCTTCCGGTGGGGAA+GGG | - | chr5_4:6626178-6626197 | Msa0833470:CDS | 55.0% | |
CATTTATCAGCTGCCGGTGG+TGG | - | chr5_4:6626214-6626233 | Msa0833470:CDS | 55.0% | |
CACAGAGTTCTCACCACCAC+CGG | + | chr5_4:6626230-6626249 | None:intergenic | 55.0% | |
! | TGGTGGTGAGAACTCTGTGG+TGG | - | chr5_4:6626231-6626250 | Msa0833470:CDS | 55.0% |
TGGTGAGAACTCTGTGGTGG+CGG | - | chr5_4:6626234-6626253 | Msa0833470:CDS | 55.0% | |
GCATGTTGATCAACGGTCCG+GGG | - | chr5_4:6626297-6626316 | Msa0833470:CDS | 55.0% | |
GGAGGATCCCCCTTCCTAAA+TGG | + | chr5_4:6628930-6628949 | None:intergenic | 55.0% | |
GGGATCCTCCGCTAAGTTAG+TGG | - | chr5_4:6628940-6628959 | Msa0833470:intron | 55.0% | |
ACCCACCACTAACTTAGCGG+AGG | + | chr5_4:6628948-6628967 | None:intergenic | 55.0% | |
CGGCGACCCAGAAGATTTGA+CGG | + | chr5_4:6630503-6630522 | None:intergenic | 55.0% | |
GTGGACCAGGTTGCAGAGAT+TGG | + | chr5_4:6632242-6632261 | None:intergenic | 55.0% | |
CCTTCCTAGAGAATCCGGTG+CGG | - | chr5_4:6632959-6632978 | Msa0833470:CDS | 55.0% | |
CTGGTATCCTCTATGGCAGC+AGG | - | chr5_4:6632987-6633006 | Msa0833470:CDS | 55.0% | |
GTTCCATCCTGCTGCCATAG+AGG | + | chr5_4:6632997-6633016 | None:intergenic | 55.0% | |
TCCATAGCAAGCGGTCACAC+AGG | - | chr5_4:6633077-6633096 | Msa0833470:CDS | 55.0% | |
! | ACCTGTGTGACCGCTTGCTA+TGG | + | chr5_4:6633081-6633100 | None:intergenic | 55.0% |
ATAGCAAGCGGTCACACAGG+TGG | - | chr5_4:6633080-6633099 | Msa0833470:CDS | 55.0% | |
GGGAGAAGCTGGTATGTCAC+CGG | - | chr5_4:6625928-6625947 | Msa0833470:CDS | 55.0% | |
AGGAGAACCGGAGGAAGTGA+TGG | - | chr5_4:6625961-6625980 | Msa0833470:CDS | 55.0% | |
! | GAACCGGAGGAAGTGATGGA+TGG | - | chr5_4:6625965-6625984 | Msa0833470:CDS | 55.0% |
! | GGGGATCACGACGACTTGTT+CGG | - | chr5_4:6633384-6633403 | Msa0833470:CDS | 55.0% |
! | ATGGCACACTTTTCGGCTGC+CGG | - | chr5_4:6633440-6633459 | Msa0833470:CDS | 55.0% |
TATGGCGAAGCGTAGTGGCG+CGG | - | chr5_4:6626131-6626150 | Msa0833470:CDS | 60.0% | |
! | GTCACGACGGCTTGTTCGGT+CGG | - | chr5_4:6626156-6626175 | Msa0833470:CDS | 60.0% |
! | TCGGTCGGTGTTTCTTCCGG+TGG | - | chr5_4:6626171-6626190 | Msa0833470:CDS | 60.0% |
! | CGGTCGGTGTTTCTTCCGGT+GGG | - | chr5_4:6626172-6626191 | Msa0833470:CDS | 60.0% |
! | GGTCGGTGTTTCTTCCGGTG+GGG | - | chr5_4:6626173-6626192 | Msa0833470:CDS | 60.0% |
GGTGTTTCTTCCGGTGGGGA+AGG | - | chr5_4:6626177-6626196 | Msa0833470:CDS | 60.0% | |
GCGCATTTATCAGCTGCCGG+TGG | - | chr5_4:6626211-6626230 | Msa0833470:CDS | 60.0% | |
! | CGGTGGTGGTGAGAACTCTG+TGG | - | chr5_4:6626228-6626247 | Msa0833470:CDS | 60.0% |
ACTCGTGGGATTGGAGACCG+AGG | - | chr5_4:6628424-6628443 | Msa0833470:intron | 60.0% | |
! | CCGCACCGGATTCTCTAGGA+AGG | + | chr5_4:6632962-6632981 | None:intergenic | 60.0% |
TCCTAGAGAATCCGGTGCGG+CGG | - | chr5_4:6632962-6632981 | Msa0833470:CDS | 60.0% | |
GGCGGAGCTGGTATCCTCTA+TGG | - | chr5_4:6632980-6632999 | Msa0833470:CDS | 60.0% | |
ATGGCGAAGCGTAGTGGCGC+GGG | - | chr5_4:6626132-6626151 | Msa0833470:CDS | 65.0% | |
! | GGGGGTCACGACGGCTTGTT+CGG | - | chr5_4:6626152-6626171 | Msa0833470:CDS | 65.0% |
TCCGCCGCACCGGATTCTCT+AGG | + | chr5_4:6632966-6632985 | None:intergenic | 65.0% | |
! | GCACACTTTTCGGCTGCCGG+TGG | - | chr5_4:6633443-6633462 | Msa0833470:CDS | 65.0% |
! | CACTTTTCGGCTGCCGGTGG+TGG | - | chr5_4:6633446-6633465 | Msa0833470:CDS | 65.0% |
TGGCGAAGCGTAGTGGCGCG+GGG | - | chr5_4:6626133-6626152 | Msa0833470:CDS | 70.0% | |
TAGTGGCGCGGGGGTCACGA+CGG | - | chr5_4:6626143-6626162 | Msa0833470:CDS | 70.0% | |
AGAATCCGGTGCGGCGGAGC+TGG | - | chr5_4:6632968-6632987 | Msa0833470:CDS | 70.0% | |
GGATACCAGCTCCGCCGCAC+CGG | + | chr5_4:6632976-6632995 | None:intergenic | 70.0% | |
! | TATGGCGGAGCGTGGTGGCG+CGG | - | chr5_4:6633363-6633382 | Msa0833470:CDS | 70.0% |
GGCGAAGCGTAGTGGCGCGG+GGG | - | chr5_4:6626134-6626153 | Msa0833470:CDS | 75.0% | |
! | ATGGCGGAGCGTGGTGGCGC+GGG | - | chr5_4:6633364-6633383 | Msa0833470:CDS | 75.0% |
!! | TGGCGGAGCGTGGTGGCGCG+GGG | - | chr5_4:6633365-6633384 | Msa0833470:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 6625638 | 6633574 | 6625638 | ID=Msa0833470;Name=Msa0833470 |
chr5_4 | mRNA | 6625638 | 6633574 | 6625638 | ID=Msa0833470-mRNA-1;Parent=Msa0833470;Name=Msa0833470-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|0|0|4|0|452 |
chr5_4 | exon | 6633355 | 6633574 | 6633355 | ID=Msa0833470-mRNA-1:exon:2938;Parent=Msa0833470-mRNA-1 |
chr5_4 | exon | 6633148 | 6633345 | 6633148 | ID=Msa0833470-mRNA-1:exon:2937;Parent=Msa0833470-mRNA-1 |
chr5_4 | exon | 6632901 | 6633138 | 6632901 | ID=Msa0833470-mRNA-1:exon:2936;Parent=Msa0833470-mRNA-1 |
chr5_4 | exon | 6625638 | 6626340 | 6625638 | ID=Msa0833470-mRNA-1:exon:2935;Parent=Msa0833470-mRNA-1 |
chr5_4 | CDS | 6633355 | 6633574 | 6633355 | ID=Msa0833470-mRNA-1:cds;Parent=Msa0833470-mRNA-1 |
chr5_4 | CDS | 6633148 | 6633345 | 6633148 | ID=Msa0833470-mRNA-1:cds;Parent=Msa0833470-mRNA-1 |
chr5_4 | CDS | 6632901 | 6633138 | 6632901 | ID=Msa0833470-mRNA-1:cds;Parent=Msa0833470-mRNA-1 |
chr5_4 | CDS | 6625638 | 6626340 | 6625638 | ID=Msa0833470-mRNA-1:cds;Parent=Msa0833470-mRNA-1 |
Gene Sequence |
Protein sequence |