AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0833470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0833470 MtrunA17_Chr5g0398711 88.716 257 20 4 196 452 32 279 4.25e-160 453
Msa0833470 MtrunA17_Chr5g0398711 85.281 231 26 4 2 226 49 277 6.83e-136 392
Msa0833470 MtrunA17_Chr5g0398721 89.700 233 23 1 220 452 1 232 2.06e-150 427
Msa0833470 MtrunA17_Chr5g0398721 89.655 232 16 3 1 226 1 230 6.66e-142 405
Msa0833470 MtrunA17_Chr4g0056901 58.898 236 80 6 223 452 1 225 3.71e-77 239
Msa0833470 MtrunA17_Chr4g0056901 54.894 235 82 8 4 226 1 223 9.45e-65 207
Msa0833470 MtrunA17_Chr4g0011241 51.055 237 104 5 223 452 1 232 1.68e-71 225
Msa0833470 MtrunA17_Chr4g0011241 49.561 228 98 7 4 219 1 223 1.05e-59 195
Msa0833470 MtrunA17_Chr6g0476521 29.130 230 137 9 227 451 4 212 2.43e-21 92.4
Msa0833470 MtrunA17_Chr6g0476521 27.602 221 129 9 8 218 4 203 5.32e-16 77.0
Msa0833470 MtrunA17_Chr6g0476511 29.565 230 134 10 227 451 4 210 1.58e-20 90.1
Msa0833470 MtrunA17_Chr7g0275631 28.384 229 150 7 227 451 3 221 4.85e-18 83.2
Msa0833470 MtrunA17_Chr7g0275631 27.650 217 146 6 8 219 3 213 6.61e-13 68.2
Msa0833470 MtrunA17_Chr1g0188241 25.764 229 147 8 226 451 3 211 9.34e-18 82.0
Msa0833470 MtrunA17_Chr1g0188241 26.484 219 135 9 7 218 3 202 1.61e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0833470 AT2G45360.1 52.381 231 93 5 223 452 1 215 6.41e-70 221
Msa0833470 AT2G45360.1 51.351 222 84 7 4 218 1 205 7.45e-59 192
Msa0833470 AT3G60780.1 50.215 233 98 6 223 452 1 218 8.37e-67 213
Msa0833470 AT3G60780.1 49.784 231 91 8 4 225 1 215 2.30e-58 191
Msa0833470 AT1G62840.1 47.718 241 98 8 223 452 1 224 1.00e-52 177
Msa0833470 AT1G62840.1 45.022 231 96 10 4 219 1 215 8.15e-41 145
Msa0833470 AT1G12320.1 43.348 233 100 8 223 448 1 208 1.10e-42 150
Msa0833470 AT1G12320.1 40.969 227 99 8 4 219 1 203 1.06e-35 131

Find 124 sgRNAs with CRISPR-Local

Find 515 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGGGATGTTCACTTTATT+AGG 0.233385 5_4:-6625644 Msa0833470:CDS
TTTATTTCTAAGATGGATTC+TGG 0.260989 5_4:-6625855 Msa0833470:CDS
TTTATTTCTAAGATGGATTC+TGG 0.260989 5_4:-6633087 Msa0833470:CDS
TATGAGTTAGTTGCTCTCTC+TGG 0.291619 5_4:+6626290 None:intergenic
TTTAGTAGGAATAGATTTCT+TGG 0.332754 5_4:-6633202 Msa0833470:CDS
TTTGATTGGAATAGATTTCT+TGG 0.340143 5_4:-6625970 Msa0833470:CDS
TATGAATTAGTTGCTCTCTC+TGG 0.350428 5_4:+6633525 None:intergenic
ATGGCGGAGCGTGGTGGCGC+GGG 0.351116 5_4:-6625826 Msa0833470:CDS
AATCACCTTGTCAGTGAATC+TGG 0.357557 5_4:-6633468 Msa0833470:CDS
TGTTCGGTCGGTGTTTCTTC+CGG 0.371763 5_4:-6633022 Msa0833470:CDS
AGATGGATTCTGGTTATATA+TGG 0.373750 5_4:-6625845 Msa0833470:CDS
AGATGGATTCTGGTTATATA+TGG 0.373750 5_4:-6633077 Msa0833470:CDS
TGGTATGTCACCGGAAGTTT+TGG 0.381944 5_4:-6626021 Msa0833470:CDS
TGGTATGTCACCGGAAGTTT+TGG 0.381944 5_4:-6633253 Msa0833470:CDS
TGAAAGACATGAAACTTGTT+TGG 0.393646 5_4:-6633551 Msa0833470:CDS
ATTTCTTGGTTGTTGATTCT+CGG 0.396616 5_4:-6625956 Msa0833470:CDS
ATTTCTTGGTTGTTGATTCT+CGG 0.396616 5_4:-6633188 Msa0833470:CDS
TCTGATCTTGACCGTTCATC+TGG 0.402447 5_4:+6633300 None:intergenic
CACGTGTTATTCATAATAGA+TGG 0.406729 5_4:-6632921 Msa0833470:CDS
TGAAAGACATGAAACTTGTT+TGG 0.407611 5_4:-6626316 Msa0833470:CDS
TGTTCGGTCAGTATTTCTTC+CGG 0.416161 5_4:-6625790 Msa0833470:CDS
GAAGTGATGGATGGTTTGAT+TGG 0.429509 5_4:-6625984 Msa0833470:CDS
GGTGTTTCTTCCGGTGGGGA+AGG 0.435607 5_4:-6633013 Msa0833470:CDS
ATGAGTTAGTTGCTCTCTCT+GGG 0.435811 5_4:+6626291 None:intergenic
AAGCATGTTGATCAACGATC+AGG 0.439670 5_4:-6625663 Msa0833470:CDS
TCCGATCTTGACCGTTCATC+AGG 0.440907 5_4:+6626068 None:intergenic
ATGAATTAGTTGCTCTCTCT+GGG 0.444178 5_4:+6633526 None:intergenic
AGAATCCGGTGCGGCGGAGC+TGG 0.456364 5_4:-6626222 Msa0833470:CDS
GGCGGAGCTGGTATCCTCTA+TGG 0.456798 5_4:-6626210 Msa0833470:CDS
TGGATAAACCAACACTCGTT+GGG 0.457594 5_4:+6626132 None:intergenic
CGGTCGGTGTTTCTTCCGGT+GGG 0.457893 5_4:-6633018 Msa0833470:CDS
GAAGTGATGGATGGTTTAGT+AGG 0.459582 5_4:-6633216 Msa0833470:CDS
CATTTATCAGCTGCCGGTGG+TGG 0.462107 5_4:-6632976 Msa0833470:CDS
GGCGGAGTTTGTTTCAGCTA+TGG 0.469299 5_4:-6633442 Msa0833470:CDS
ATGGCGAAGCGTAGTGGCGC+GGG 0.470110 5_4:-6633058 Msa0833470:CDS
GGGGATCACGACGACTTGTT+CGG 0.470863 5_4:-6625806 Msa0833470:CDS
ACCTGTGTGACCGCTTGCTA+TGG 0.473046 5_4:+6626112 None:intergenic
AGTATTTCTTCCGGTGGGGA+AGG 0.473923 5_4:-6625781 Msa0833470:CDS
GTGTTTCTTCCGGTGGGGAA+GGG 0.481603 5_4:-6633012 Msa0833470:CDS
AGATTCACTGACAAGGTGAT+TGG 0.483078 5_4:+6633470 None:intergenic
TTCTCTAGGAAGGTGATTGA+TGG 0.483897 5_4:+6626241 None:intergenic
TGTTACGGCGATGAAGCATA+AGG 0.490118 5_4:-6625712 Msa0833470:CDS
AATCACCTTCCTAGAGAATC+CGG 0.490375 5_4:-6626236 Msa0833470:CDS
AAGGTGATTGATGGTAGTTA+TGG 0.490442 5_4:+6626250 None:intergenic
GACGTGCTGTTCATAATAGA+TGG 0.491292 5_4:-6625689 Msa0833470:CDS
CGGTCAGTATTTCTTCCGGT+GGG 0.491351 5_4:-6625786 Msa0833470:CDS
GTCACGACGGCTTGTTCGGT+CGG 0.491936 5_4:-6633034 Msa0833470:CDS
GGTTCTCCTACCAAAACTTC+CGG 0.492682 5_4:+6626011 None:intergenic
GGTTCTCCTACCAAAACTTC+CGG 0.492682 5_4:+6633243 None:intergenic
TGGCGGAGCGTGGTGGCGCG+GGG 0.493800 5_4:-6625825 Msa0833470:CDS
TATGGCGGAGCGTGGTGGCG+CGG 0.506489 5_4:-6625827 Msa0833470:CDS
CTGGTATCCTCTATGGCAGC+AGG 0.510352 5_4:-6626203 Msa0833470:CDS
TTTGTTTCAGCTATGGCGGC+AGG 0.510446 5_4:-6633435 Msa0833470:CDS
CACAGAGTTCTCACCACCAC+CGG 0.513456 5_4:+6632963 None:intergenic
TGGTGGTGACAACTCTGTTA+CGG 0.515438 5_4:-6625727 Msa0833470:CDS
AAACCATCCATCACTTCCTC+CGG 0.520767 5_4:+6625990 None:intergenic
CTTGCAAAGTTGAGTAGTAA+AGG 0.521658 5_4:-6625906 Msa0833470:CDS
ACCTGTGTGACGTGATGCTA+TGG 0.522581 5_4:+6633344 None:intergenic
AACAGAGTTGTCACCACCAC+CGG 0.522950 5_4:+6625731 None:intergenic
TTCACTGACAAGGTGATTGG+TGG 0.530233 5_4:+6633473 None:intergenic
AAACCATCCATCACTTCCTC+CGG 0.536217 5_4:+6633222 None:intergenic
GGATACCAGCTCCGCCGCAC+CGG 0.538075 5_4:+6626217 None:intergenic
GTTACGGCGATGAAGCATAA+GGG 0.543192 5_4:-6625711 Msa0833470:CDS
AGGAGAACCGGAGGAAGTGA+TGG 0.549491 5_4:-6625997 Msa0833470:CDS
AGGAGAACCGGAGGAAGTGA+TGG 0.549491 5_4:-6633229 Msa0833470:CDS
TCCTGATGAACGGTCAAGAT+CGG 0.549497 5_4:-6626069 Msa0833470:CDS
GGTGGGGAAGGGAATTCATA+TGG 0.553993 5_4:-6633001 Msa0833470:CDS
GGTGGGGAAGGGAATTCATA+TGG 0.556013 5_4:-6625769 Msa0833470:CDS
ATGGATAAACCAACACTCGT+TGG 0.556717 5_4:+6626131 None:intergenic
CGTTGGAATAACTCCGCCAT+GGG 0.559266 5_4:+6633380 None:intergenic
TCGGTCAGTATTTCTTCCGG+TGG 0.561365 5_4:-6625787 Msa0833470:CDS
GTATTTCTTCCGGTGGGGAA+GGG 0.563160 5_4:-6625780 Msa0833470:CDS
AGCATGTTGATCAACGATCA+GGG 0.563826 5_4:-6625662 Msa0833470:CDS
GGAGTTATTCCAACGAGTGT+TGG 0.565148 5_4:-6633372 Msa0833470:CDS
TCCTAGAGAATCCGGTGCGG+CGG 0.565345 5_4:-6626228 Msa0833470:CDS
TCGGTCGGTGTTTCTTCCGG+TGG 0.566963 5_4:-6633019 Msa0833470:CDS
GGAGTTATCCCAACGAGTGT+TGG 0.567790 5_4:-6626140 Msa0833470:CDS
TGGCGAAGCGTAGTGGCGCG+GGG 0.569786 5_4:-6633057 Msa0833470:CDS
TTTCAGCTATGGCGGCAGGA+TGG 0.575184 5_4:-6633431 Msa0833470:CDS
ATGGCGCATTTATCAGCTGC+CGG 0.576415 5_4:-6632982 Msa0833470:CDS
CTCAGCTGATAGTAGAAACA+TGG 0.579071 5_4:-6633404 Msa0833470:CDS
GTTCCATCCTGCTGCCATAG+AGG 0.581085 5_4:+6626196 None:intergenic
TTATATATGGCGAAGCGTAG+TGG 0.584131 5_4:-6633064 Msa0833470:CDS
TGGTGAGAACTCTGTGGTGG+CGG 0.585821 5_4:-6632956 Msa0833470:CDS
ATATGAATTCCCTTCCCCAC+CGG 0.588515 5_4:+6625771 None:intergenic
ATATGAATTCCCTTCCCCAC+CGG 0.588515 5_4:+6633003 None:intergenic
TCCGCCGCACCGGATTCTCT+AGG 0.590144 5_4:+6626227 None:intergenic
ATGGATAAACCAACACTCGT+TGG 0.590421 5_4:+6633363 None:intergenic
CTCAGCTGATAGTAGAAACA+TGG 0.594393 5_4:-6626172 Msa0833470:CDS
GGGAGAAGCTGGTATGTCAC+CGG 0.594972 5_4:-6626030 Msa0833470:CDS
GGGAGAAGCTGGTATGTCAC+CGG 0.594972 5_4:-6633262 Msa0833470:CDS
TCGTTGGAATAACTCCGCCA+TGG 0.605659 5_4:+6633379 None:intergenic
GGTCGGTGTTTCTTCCGGTG+GGG 0.609408 5_4:-6633017 Msa0833470:CDS
TTATATATGGCGGAGCGTGG+TGG 0.612287 5_4:-6625832 Msa0833470:CDS
CCGCACCGGATTCTCTAGGA+AGG 0.614758 5_4:+6626231 None:intergenic
GAACCGGAGGAAGTGATGGA+TGG 0.618455 5_4:-6625993 Msa0833470:CDS
GAACCGGAGGAAGTGATGGA+TGG 0.618455 5_4:-6633225 Msa0833470:CDS
GGAGTTTGTTTCAGCTATGG+CGG 0.620173 5_4:-6633439 Msa0833470:CDS
TCCATAGCAAGCGGTCACAC+AGG 0.622700 5_4:-6626113 Msa0833470:CDS
TGTGTATAGTTCCAGATGAA+CGG 0.623096 5_4:-6633311 Msa0833470:CDS
GGTCAGTATTTCTTCCGGTG+GGG 0.623177 5_4:-6625785 Msa0833470:CDS
TGGTTATATATGGCGGAGCG+TGG 0.623341 5_4:-6625835 Msa0833470:CDS
ATAGTAGAAACATGGTCCCA+TGG 0.627081 5_4:-6633396 Msa0833470:CDS
GGCGAAGCGTAGTGGCGCGG+GGG 0.628973 5_4:-6633056 Msa0833470:CDS
TATCCTCTATGGCAGCAGGA+TGG 0.630751 5_4:-6626199 Msa0833470:CDS
TATGGCGAAGCGTAGTGGCG+CGG 0.632704 5_4:-6633059 Msa0833470:CDS
TGGTGGTGAGAACTCTGTGG+TGG 0.632865 5_4:-6632959 Msa0833470:CDS
TGTGCATAGTTCCTGATGAA+CGG 0.633781 5_4:-6626079 Msa0833470:CDS
ATAGCAAGCGGTCACACAGG+TGG 0.636263 5_4:-6626110 Msa0833470:CDS
CCACACCAGATTCACTGACA+AGG 0.641093 5_4:+6633463 None:intergenic
GGATTAAGCATGTTGATCAA+CGG 0.643256 5_4:-6632900 Msa0833470:intron
TGGATTCTGGTTATATATGG+CGG 0.643639 5_4:-6625842 Msa0833470:CDS
GCATGTTGATCAACGATCAG+GGG 0.659538 5_4:-6625661 Msa0833470:CDS
CGGTGGTGGTGAGAACTCTG+TGG 0.659832 5_4:-6632962 Msa0833470:CDS
CCTTGTCAGTGAATCTGGTG+TGG 0.666939 5_4:-6633463 Msa0833470:CDS
GTTGGTTTATCCATAGCAAG+CGG 0.671936 5_4:-6626122 Msa0833470:CDS
GCGCATTTATCAGCTGCCGG+TGG 0.672929 5_4:-6632979 Msa0833470:CDS
TGTCAGTGAATCTGGTGTGG+CGG 0.676538 5_4:-6633460 Msa0833470:CDS
TGAATTAGTTGCTCTCTCTG+GGG 0.679617 5_4:+6633527 None:intergenic
TGAGTTAGTTGCTCTCTCTG+GGG 0.683268 5_4:+6626292 None:intergenic
ATAGTAGAAACATGGTCACA+CGG 0.693003 5_4:-6626164 Msa0833470:CDS
GTAGAAACATGGTCCCATGG+CGG 0.759198 5_4:-6633393 Msa0833470:CDS
CCTTCCTAGAGAATCCGGTG+CGG 0.793946 5_4:-6626231 Msa0833470:CDS
GTAGAAACATGGTCACACGG+CGG 0.823354 5_4:-6626161 Msa0833470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTAATATTTTATTTAAT+TGG + chr5_4:6627897-6627916 None:intergenic 0.0%
!! TATATATAATTATTTAAATT+TGG - chr5_4:6631167-6631186 Msa0833470:intron 0.0%
!!! TCACTATAAAAAATATTTTA+GGG + chr5_4:6627019-6627038 None:intergenic 10.0%
!!! ATCACTATAAAAAATATTTT+AGG + chr5_4:6627020-6627039 None:intergenic 10.0%
!! AATAAAAAAAAAAACTATGT+TGG - chr5_4:6627141-6627160 Msa0833470:intron 10.0%
!! ATAAAAAAAAAAACTATGTT+GGG - chr5_4:6627142-6627161 Msa0833470:intron 10.0%
!! AAAAGAAAAATAATAGAAAA+AGG - chr5_4:6627759-6627778 Msa0833470:intron 10.0%
!! GAAAATTAAACATAAATAAA+TGG + chr5_4:6628584-6628603 None:intergenic 10.0%
!! CTATATATAAAAAAAAAACT+TGG - chr5_4:6628603-6628622 Msa0833470:intron 10.0%
!!! TTTTTTATCATAGTTATTAA+AGG + chr5_4:6629612-6629631 None:intergenic 10.0%
!!! GTAAAAAAATTACTTTTTAA+AGG + chr5_4:6629812-6629831 None:intergenic 10.0%
!! AAAAATAAACAAAACAAATT+AGG + chr5_4:6629910-6629929 None:intergenic 10.0%
!!! TTTGTTTTGTTTATTTTTTT+TGG - chr5_4:6629912-6629931 Msa0833470:intron 10.0%
!!! TTCTTTTTTTTTTTCAAAAT+AGG - chr5_4:6630314-6630333 Msa0833470:intron 10.0%
!!! TCTTTTTTTTTTTCAAAATA+GGG - chr5_4:6630315-6630334 Msa0833470:intron 10.0%
!!! TTGATAAGTTTTAATTTTTA+TGG + chr5_4:6631199-6631218 None:intergenic 10.0%
!!! AATTTTCATAAAAAAGTATA+AGG + chr5_4:6631262-6631281 None:intergenic 10.0%
!! TTGAAATTTGAAAATGATTA+TGG - chr5_4:6626424-6626443 Msa0833470:intron 15.0%
!!! TAACATTTCTTTTCTTAAAA+AGG + chr5_4:6627203-6627222 None:intergenic 15.0%
!! TTTATTCTAGATAGAAAAAT+TGG - chr5_4:6628160-6628179 Msa0833470:intron 15.0%
!! AGTTAATGATATTTAACAAA+AGG - chr5_4:6628202-6628221 Msa0833470:intron 15.0%
!! TTAAAACTACTTATAACAAA+GGG - chr5_4:6628471-6628490 Msa0833470:intron 15.0%
!!! GTGTTATTATACAATAATAT+TGG + chr5_4:6628675-6628694 None:intergenic 15.0%
!! AATACAAAAAAGTAAATAGT+AGG - chr5_4:6629406-6629425 Msa0833470:intron 15.0%
!! GAAATAGAGATAATATTAAA+TGG - chr5_4:6629491-6629510 Msa0833470:intron 15.0%
!! TTAAAGGAATTAGTATTTAA+AGG + chr5_4:6629596-6629615 None:intergenic 15.0%
!! TTTGTTTAAAAAAATCGTTT+CGG + chr5_4:6629663-6629682 None:intergenic 15.0%
!!! TTTTCTTAAAAAAATGGTTT+CGG + chr5_4:6629717-6629736 None:intergenic 15.0%
!!! TAGCATTTTTCTTAAAAAAA+TGG + chr5_4:6629723-6629742 None:intergenic 15.0%
!! ATTAAAACAATGTATTTCTT+TGG - chr5_4:6631077-6631096 Msa0833470:intron 15.0%
!! TACAAATTTATTCTATTTCA+TGG - chr5_4:6631349-6631368 Msa0833470:intron 15.0%
!!! TTTATGATGAATTTTTTCAT+TGG - chr5_4:6631388-6631407 Msa0833470:intron 15.0%
!!! ATATTTTTATGATATTCTGT+AGG - chr5_4:6632204-6632223 Msa0833470:intron 15.0%
!!! TGCTAATTTTATTTCTAAGA+TGG - chr5_4:6626096-6626115 Msa0833470:CDS 20.0%
!! AGGAAAGTAAAAATATGATT+TGG + chr5_4:6626389-6626408 None:intergenic 20.0%
!!! ACTTTCCTTTTTTGTAAATA+CGG - chr5_4:6626401-6626420 Msa0833470:intron 20.0%
!!! TTTTTTGTTGATCATGATTA+TGG - chr5_4:6626468-6626487 Msa0833470:intron 20.0%
!! TATAACATGTTTGAAAAAGA+TGG + chr5_4:6626708-6626727 None:intergenic 20.0%
!!! ATCTTTTTCAAACATGTTAT+AGG - chr5_4:6626707-6626726 Msa0833470:intron 20.0%
!!! TCTTTTTCAAACATGTTATA+GGG - chr5_4:6626708-6626727 Msa0833470:intron 20.0%
!!! ATTTGTTTGTGTTTTATACT+TGG + chr5_4:6626763-6626782 None:intergenic 20.0%
!!! GAACTTTTTTGAAATGAAAA+TGG - chr5_4:6627569-6627588 Msa0833470:intron 20.0%
!!! ATTTTTGTTTCTTAAAAGAG+CGG + chr5_4:6628041-6628060 None:intergenic 20.0%
!! AAAAAATAATTTATCACTCG+TGG - chr5_4:6628409-6628428 Msa0833470:intron 20.0%
!! AAAAATAATTTATCACTCGT+GGG - chr5_4:6628410-6628429 Msa0833470:intron 20.0%
!!! CTTTGTTATAAGTAGTTTTA+AGG + chr5_4:6628472-6628491 None:intergenic 20.0%
!! CTTAAAACTACTTATAACAA+AGG - chr5_4:6628470-6628489 Msa0833470:intron 20.0%
!!! AAAAACACATGTGATTTTTT+AGG - chr5_4:6628721-6628740 Msa0833470:intron 20.0%
!!! AAAACACATGTGATTTTTTA+GGG - chr5_4:6628722-6628741 Msa0833470:intron 20.0%
!! ATCTTAATCTTAATTGACTA+GGG + chr5_4:6628804-6628823 None:intergenic 20.0%
!!! TTATTTTAACATCAGCAATT+AGG + chr5_4:6628832-6628851 None:intergenic 20.0%
!! TAATTATATGAAGAATGAGT+GGG + chr5_4:6629040-6629059 None:intergenic 20.0%
!! TTAATTATATGAAGAATGAG+TGG + chr5_4:6629041-6629060 None:intergenic 20.0%
!!! CTCTGTTTGTTTAAAATAAA+TGG - chr5_4:6629370-6629389 Msa0833470:intron 20.0%
!! ATTAGTATTTAAAGGATTGA+TGG + chr5_4:6629588-6629607 None:intergenic 20.0%
!! ATAAACAAAACAAATTAGGA+AGG + chr5_4:6629906-6629925 None:intergenic 20.0%
!!! ACAAAATTAACCTCAAATTT+TGG + chr5_4:6629940-6629959 None:intergenic 20.0%
!! AAAACGTATTTAGTAGTTTA+AGG + chr5_4:6630042-6630061 None:intergenic 20.0%
!! AAACAAACAAACTAAGATTA+TGG + chr5_4:6630073-6630092 None:intergenic 20.0%
!!! TTAGATTGGATTTTAAATGT+TGG - chr5_4:6630185-6630204 Msa0833470:intron 20.0%
!! ATATTTCTCAACAACATTAT+TGG + chr5_4:6630556-6630575 None:intergenic 20.0%
!!! AAAGTAAGTTTTGAATTAGA+TGG + chr5_4:6630724-6630743 None:intergenic 20.0%
!! ATTGTAAATGAGACTATAAT+AGG + chr5_4:6630769-6630788 None:intergenic 20.0%
!! ATTATATTAGTAGTTGGATT+TGG - chr5_4:6631516-6631535 Msa0833470:intron 20.0%
!! TTATATTAGTAGTTGGATTT+GGG - chr5_4:6631517-6631536 Msa0833470:intron 20.0%
!! CAAGAATTCTAAATTACTTT+AGG - chr5_4:6631569-6631588 Msa0833470:intron 20.0%
!!! GGTTTTTATTGTTTTTGTTT+TGG - chr5_4:6631590-6631609 Msa0833470:intron 20.0%
!! TTGAATAATAAGGGTAAATA+TGG - chr5_4:6631937-6631956 Msa0833470:intron 20.0%
!! AATATCAAAACTTAATACGT+AGG + chr5_4:6632171-6632190 None:intergenic 20.0%
!!! TGCTAATTTTATTTCTAAGA+TGG - chr5_4:6626096-6626115 Msa0833470:CDS 20.0%
! TTTAGTAGGAATAGATTTCT+TGG - chr5_4:6625988-6626007 Msa0833470:CDS 25.0%
!!! TTTATTTCTAAGATGGATTC+TGG - chr5_4:6626103-6626122 Msa0833470:CDS 25.0%
!! ATATGATTTGGATGTTGTAT+TGG + chr5_4:6626377-6626396 None:intergenic 25.0%
! TTCAACCGTATTTACAAAAA+AGG + chr5_4:6626409-6626428 None:intergenic 25.0%
!! TCTAAGTTGACTTTAATGTA+TGG - chr5_4:6626585-6626604 Msa0833470:intron 25.0%
!!! CTTTTTCAAACATGTTATAG+GGG - chr5_4:6626709-6626728 Msa0833470:intron 25.0%
! CTTGGTGAAATAGAAATTAT+GGG + chr5_4:6626745-6626764 None:intergenic 25.0%
!! ACTTGGTGAAATAGAAATTA+TGG + chr5_4:6626746-6626765 None:intergenic 25.0%
! ATAGTGATACCTCTTAAAAA+AGG - chr5_4:6627032-6627051 Msa0833470:intron 25.0%
!!! TAGCATTTTCCTTTTTTAAG+AGG + chr5_4:6627044-6627063 None:intergenic 25.0%
!!! AAAAGTTTTGTTTGAGTTCA+AGG - chr5_4:6627095-6627114 Msa0833470:intron 25.0%
!! TTCATGGTGATTTTTCTTAT+AGG + chr5_4:6627387-6627406 None:intergenic 25.0%
! TTAGTTGCAAGAAAATGATA+AGG - chr5_4:6627632-6627651 Msa0833470:intron 25.0%
! CAGAAATTATTGTGAATCTA+TGG - chr5_4:6627819-6627838 Msa0833470:intron 25.0%
! TAAAGCTTAAAACCTTATGT+TGG - chr5_4:6628062-6628081 Msa0833470:intron 25.0%
! AACATAAGCTTAATATGGAA+CGG + chr5_4:6628249-6628268 None:intergenic 25.0%
! AAGCAAACATAAGCTTAATA+TGG + chr5_4:6628254-6628273 None:intergenic 25.0%
! CCTCTTAAAAATAACATTCA+TGG + chr5_4:6628510-6628529 None:intergenic 25.0%
!!! CCATGAATGTTATTTTTAAG+AGG - chr5_4:6628507-6628526 Msa0833470:intron 25.0%
!! TTGATTTTGTCATCGAAAAA+AGG - chr5_4:6628531-6628550 Msa0833470:intron 25.0%
! ATTGTGTACTCAAATGATTT+AGG - chr5_4:6628635-6628654 Msa0833470:intron 25.0%
! TTGTGTACTCAAATGATTTA+GGG - chr5_4:6628636-6628655 Msa0833470:intron 25.0%
!!! AAACACATGTGATTTTTTAG+GGG - chr5_4:6628723-6628742 Msa0833470:intron 25.0%
! CTGTGTGAATATAAATATAG+AGG - chr5_4:6628764-6628783 Msa0833470:intron 25.0%
! TGAATATAAATATAGAGGCA+TGG - chr5_4:6628769-6628788 Msa0833470:intron 25.0%
! CATCTTAATCTTAATTGACT+AGG + chr5_4:6628805-6628824 None:intergenic 25.0%
! CTGATGTTAAAATAACACAA+TGG - chr5_4:6628837-6628856 Msa0833470:intron 25.0%
!! TAAATGGTCAATGTTTTCTT+GGG + chr5_4:6628914-6628933 None:intergenic 25.0%
!!! TCTTTTTTCACAAAGAAACT+TGG + chr5_4:6628987-6629006 None:intergenic 25.0%
! AATTATATGAAGAATGAGTG+GGG + chr5_4:6629039-6629058 None:intergenic 25.0%
!! TTCATTTGACAATTTTCTTC+TGG - chr5_4:6629135-6629154 Msa0833470:intron 25.0%
! CATCAATTAAATTCTCATGA+AGG - chr5_4:6629272-6629291 Msa0833470:intron 25.0%
! AATTAAATTCTCATGAAGGA+GGG - chr5_4:6629276-6629295 Msa0833470:intron 25.0%
!!! AAAAGGGTATGCAATTTTAT+CGG + chr5_4:6629529-6629548 None:intergenic 25.0%
!!! GGATTAGTCTTTTTACAAAA+GGG + chr5_4:6629545-6629564 None:intergenic 25.0%
!!! TGGATTAGTCTTTTTACAAA+AGG + chr5_4:6629546-6629565 None:intergenic 25.0%
! TTAAACAAATGTTTACGACA+AGG - chr5_4:6629674-6629693 Msa0833470:intron 25.0%
! TGAATCATTAACAATGTCTT+TGG - chr5_4:6629859-6629878 Msa0833470:intron 25.0%
!!! ATTTTAAGACTCGGAAAAAA+CGG + chr5_4:6630100-6630119 None:intergenic 25.0%
! TAAAATTGACGGAAAAAATG+AGG - chr5_4:6630114-6630133 Msa0833470:intron 25.0%
! CAATGAATCAACAATATCAT+TGG + chr5_4:6630356-6630375 None:intergenic 25.0%
!!! TACATTTTATCATTGATTCC+TGG - chr5_4:6630382-6630401 Msa0833470:intron 25.0%
!!! AAGTATATTTTTTTCTCACC+AGG + chr5_4:6630403-6630422 None:intergenic 25.0%
!! ATATTTTCATCATGTGTAGA+CGG + chr5_4:6630439-6630458 None:intergenic 25.0%
! AGAAATATTGATCAACCATT+AGG - chr5_4:6630568-6630587 Msa0833470:intron 25.0%
! GATAAATCAAGACACAATAT+TGG - chr5_4:6630658-6630677 Msa0833470:intron 25.0%
! AACTATCCATGTGAAAATAT+GGG + chr5_4:6630850-6630869 None:intergenic 25.0%
! TAACTATCCATGTGAAAATA+TGG + chr5_4:6630851-6630870 None:intergenic 25.0%
! AGACAACATTATAAGTTTGT+TGG + chr5_4:6630947-6630966 None:intergenic 25.0%
! AATTTATTCTATTTCATGGC+AGG - chr5_4:6631353-6631372 Msa0833470:intron 25.0%
! AATGTGCATATTATTTCCTA+AGG - chr5_4:6631489-6631508 Msa0833470:intron 25.0%
! TACTAATATAATTTCGCCTT+AGG + chr5_4:6631508-6631527 None:intergenic 25.0%
! AAATTGACTGTAATAAAGAG+TGG - chr5_4:6631763-6631782 Msa0833470:intron 25.0%
!!! AGCTTTTGCTTTGAATAATA+AGG - chr5_4:6631927-6631946 Msa0833470:intron 25.0%
!!! GCTTTTGCTTTGAATAATAA+GGG - chr5_4:6631928-6631947 Msa0833470:intron 25.0%
! ATATATAGATCCATCATAAG+AGG - chr5_4:6632363-6632382 Msa0833470:intron 25.0%
! TATATAGATCCATCATAAGA+GGG - chr5_4:6632364-6632383 Msa0833470:intron 25.0%
! TCATATAAGTTGTCACAAAA+TGG + chr5_4:6632426-6632445 None:intergenic 25.0%
!!! TCACAAAAGTTGTTGATTTT+TGG - chr5_4:6632543-6632562 Msa0833470:intron 25.0%
!!! ACATTTGACTTTTCATCTTT+GGG + chr5_4:6632691-6632710 None:intergenic 25.0%
! TTTGATTGGAATAGATTTCT+TGG - chr5_4:6633220-6633239 Msa0833470:CDS 25.0%
!!! TTTATTTCTAAGATGGATTC+TGG - chr5_4:6626103-6626122 Msa0833470:CDS 25.0%
! TGAAAGACATGAAACTTGTT+TGG - chr5_4:6625639-6625658 Msa0833470:CDS 30.0%
ATCAGAGTATGCAAAAAACA+TGG - chr5_4:6625907-6625926 Msa0833470:CDS 30.0%
TCAGAGTATGCAAAAAACAT+GGG - chr5_4:6625908-6625927 Msa0833470:CDS 30.0%
!! ATTTCTTGGTTGTTGATTCT+CGG - chr5_4:6626002-6626021 Msa0833470:CDS 30.0%
!!! AAGATTTTACAAGAGTGTTG+AGG - chr5_4:6626029-6626048 Msa0833470:CDS 30.0%
! TTAGCAAAGTTGAGTTGTAA+AGG - chr5_4:6626052-6626071 Msa0833470:CDS 30.0%
! AGATGGATTCTGGTTATATA+TGG - chr5_4:6626113-6626132 Msa0833470:CDS 30.0%
! CACGTGTTATTCATAATAGA+TGG - chr5_4:6626269-6626288 Msa0833470:CDS 30.0%
TTGATCATGATTATGGATAG+TGG - chr5_4:6626475-6626494 Msa0833470:intron 30.0%
AAGATGCTAGATAAATGTAG+CGG + chr5_4:6626558-6626577 None:intergenic 30.0%
GAAGATATATAATGCTCTTG+AGG + chr5_4:6626641-6626660 None:intergenic 30.0%
GTACAAGTTATTAGTAACCA+GGG + chr5_4:6626671-6626690 None:intergenic 30.0%
TGTACAAGTTATTAGTAACC+AGG + chr5_4:6626672-6626691 None:intergenic 30.0%
ACATGTTATAGGGGTTAAAT+TGG - chr5_4:6626718-6626737 Msa0833470:intron 30.0%
CATGTTATAGGGGTTAAATT+GGG - chr5_4:6626719-6626738 Msa0833470:intron 30.0%
AGGAAAAAAATGGACATCTT+GGG - chr5_4:6626962-6626981 Msa0833470:intron 30.0%
!!! AGGCATTTTGATTTTAGGTT+TGG - chr5_4:6626988-6627007 Msa0833470:intron 30.0%
!!! GGTAACCTTTTTTGAAGTAA+GGG + chr5_4:6627283-6627302 None:intergenic 30.0%
CTTACTTCAAAAAAGGTTAC+CGG - chr5_4:6627282-6627301 Msa0833470:intron 30.0%
GATTATAGTGAAGGTTTGAT+GGG + chr5_4:6627453-6627472 None:intergenic 30.0%
TGATTATAGTGAAGGTTTGA+TGG + chr5_4:6627454-6627473 None:intergenic 30.0%
! TATTTTCACACTATCTTCAC+CGG + chr5_4:6627861-6627880 None:intergenic 30.0%
TGAAGATAGTGTGAAAATAG+TGG - chr5_4:6627862-6627881 Msa0833470:intron 30.0%
TAGTGTGAAAATAGTGGTAA+TGG - chr5_4:6627868-6627887 Msa0833470:intron 30.0%
GTGTTAGAAATAAAGAGAAC+CGG - chr5_4:6627934-6627953 Msa0833470:intron 30.0%
TTGAACACTCGATTGAATAA+TGG + chr5_4:6627988-6628007 None:intergenic 30.0%
GTTGCATTCAATTATTGGAA+CGG + chr5_4:6628105-6628124 None:intergenic 30.0%
TTGACGTTGCATTCAATTAT+TGG + chr5_4:6628110-6628129 None:intergenic 30.0%
ACATAAGCTTAATATGGAAC+GGG + chr5_4:6628248-6628267 None:intergenic 30.0%
! GTAGTTAGAATTGATTCTAG+AGG - chr5_4:6628285-6628304 Msa0833470:intron 30.0%
TTGATTCTAACTCGATGTTA+TGG - chr5_4:6628348-6628367 Msa0833470:intron 30.0%
AAATAACACAATGGATGAGA+CGG - chr5_4:6628846-6628865 Msa0833470:intron 30.0%
! CTAAATGGTCAATGTTTTCT+TGG + chr5_4:6628915-6628934 None:intergenic 30.0%
CAAGAAAACATTGACCATTT+AGG - chr5_4:6628913-6628932 Msa0833470:intron 30.0%
AAAACATTGACCATTTAGGA+AGG - chr5_4:6628917-6628936 Msa0833470:intron 30.0%
AAACATTGACCATTTAGGAA+GGG - chr5_4:6628918-6628937 Msa0833470:intron 30.0%
!! TGTCTTTAGGATTAATTCAG+AGG + chr5_4:6629079-6629098 None:intergenic 30.0%
CTGAATTAATCCTAAAGACA+AGG - chr5_4:6629079-6629098 Msa0833470:intron 30.0%
AAGAAATAGACCTTGTCTTT+AGG + chr5_4:6629092-6629111 None:intergenic 30.0%
TTGCTGGGAATAATCTTAAA+CGG - chr5_4:6629110-6629129 Msa0833470:intron 30.0%
!! TTTTTCGAATTTGCATGTTC+TGG - chr5_4:6629159-6629178 Msa0833470:intron 30.0%
CAATTAAATTCTCATGAAGG+AGG - chr5_4:6629275-6629294 Msa0833470:intron 30.0%
ATGGCATGAATTTATAAGCA+GGG + chr5_4:6629569-6629588 None:intergenic 30.0%
!!! TTTTTTGGAGCCAAAATTTG+AGG - chr5_4:6629927-6629946 Msa0833470:intron 30.0%
TTTCCGAGTCTTAAAATTGA+CGG - chr5_4:6630103-6630122 Msa0833470:intron 30.0%
!!! TTTCCGTCAATTTTAAGACT+CGG + chr5_4:6630109-6630128 None:intergenic 30.0%
AAGTCAAAGAGTTCTTAGAT+TGG - chr5_4:6630171-6630190 Msa0833470:intron 30.0%
! TGGATTTTAAATGTTGGAGA+TGG - chr5_4:6630191-6630210 Msa0833470:intron 30.0%
CAATTATGAGGAAGTTGAAA+TGG - chr5_4:6630229-6630248 Msa0833470:intron 30.0%
GAAGTTGAAATGGAAATAGA+TGG - chr5_4:6630239-6630258 Msa0833470:intron 30.0%
GAATCAACAATATCATTGGT+AGG + chr5_4:6630352-6630371 None:intergenic 30.0%
TTGAGATTTAACTCATGGTT+CGG + chr5_4:6630523-6630542 None:intergenic 30.0%
ACCATTAGGATTATATGCAA+TGG - chr5_4:6630582-6630601 Msa0833470:intron 30.0%
CCATTAGGATTATATGCAAT+GGG - chr5_4:6630583-6630602 Msa0833470:intron 30.0%
CATTAGGATTATATGCAATG+GGG - chr5_4:6630584-6630603 Msa0833470:intron 30.0%
AAGACACAATATTGGACAAA+AGG - chr5_4:6630666-6630685 Msa0833470:intron 30.0%
!!! AGTTTTGAATTAGATGGAGA+TGG + chr5_4:6630718-6630737 None:intergenic 30.0%
! CATTTTTAACAGATTGTCCT+TGG + chr5_4:6630807-6630826 None:intergenic 30.0%
GGACAATCTGTTAAAAATGT+TGG - chr5_4:6630808-6630827 Msa0833470:intron 30.0%
TTGTCTACAAAGAAGTCTTT+CGG - chr5_4:6630961-6630980 Msa0833470:intron 30.0%
! AGTCTTTCGGAATTTAAGAT+AGG - chr5_4:6630974-6630993 Msa0833470:intron 30.0%
ATTGGAATTAGCAAAAGTCA+TGG - chr5_4:6631406-6631425 Msa0833470:intron 30.0%
TCAACTCTTAACACTTGAAT+TGG + chr5_4:6631450-6631469 None:intergenic 30.0%
!! TCAAGTGTTAAGAGTTGATA+CGG - chr5_4:6631452-6631471 Msa0833470:intron 30.0%
GGCGAAATTATATTAGTAGT+TGG - chr5_4:6631510-6631529 Msa0833470:intron 30.0%
TTGACAAAAAAAGCTCTGTT+TGG + chr5_4:6632087-6632106 None:intergenic 30.0%
!!! AGAGCTAAAAGCTCTTTTTT+TGG - chr5_4:6632130-6632149 Msa0833470:intron 30.0%
!!! GAGCTAAAAGCTCTTTTTTT+GGG - chr5_4:6632131-6632150 Msa0833470:intron 30.0%
!! GATCATTACTTTTCTTCAAG+TGG + chr5_4:6632279-6632298 None:intergenic 30.0%
AATATTCATACCCTTTCTGT+TGG + chr5_4:6632328-6632347 None:intergenic 30.0%
TTACTTTCTCTCTATTGCTT+TGG - chr5_4:6632477-6632496 Msa0833470:intron 30.0%
!! TCTCCTTTTCCTTTGAAAAT+TGG - chr5_4:6632514-6632533 Msa0833470:intron 30.0%
!! GACATTTGACTTTTCATCTT+TGG + chr5_4:6632692-6632711 None:intergenic 30.0%
TTATATTTATGGGTGTGTGA+TGG + chr5_4:6632720-6632739 None:intergenic 30.0%
!! GTGTAGTGGGTTATATTTAT+GGG + chr5_4:6632730-6632749 None:intergenic 30.0%
! TGAAAGACATGAAACTTGTT+TGG - chr5_4:6625639-6625658 Msa0833470:CDS 30.0%
!! ATTTCTTGGTTGTTGATTCT+CGG - chr5_4:6626002-6626021 Msa0833470:CDS 30.0%
!!! AAGATTTTACAAGAGTGTTG+AGG - chr5_4:6626029-6626048 Msa0833470:CDS 30.0%
! AGATGGATTCTGGTTATATA+TGG - chr5_4:6626113-6626132 Msa0833470:CDS 30.0%
! AATTCATATGGCACACTTTT+CGG - chr5_4:6633433-6633452 Msa0833470:CDS 30.0%
ATGAATTAGTTGCTCTCTCT+GGG + chr5_4:6625667-6625686 None:intergenic 35.0%
TATGAATTAGTTGCTCTCTC+TGG + chr5_4:6625668-6625687 None:intergenic 35.0%
TGTGTATAGTTCCAGATGAA+CGG - chr5_4:6625879-6625898 Msa0833470:CDS 35.0%
GGATTAAGCATGTTGATCAA+CGG - chr5_4:6626290-6626309 Msa0833470:CDS 35.0%
TCTAATAAAGTGAACATCCC+CGG + chr5_4:6626317-6626336 None:intergenic 35.0%
ATATATCTTCTCTGATTCCC+TGG - chr5_4:6626651-6626670 Msa0833470:intron 35.0%
GCTTGATACGAGGAAAAAAA+TGG - chr5_4:6626952-6626971 Msa0833470:intron 35.0%
GAGGAAAAAAATGGACATCT+TGG - chr5_4:6626961-6626980 Msa0833470:intron 35.0%
!!! GGACAAGGCATTTTGATTTT+AGG - chr5_4:6626983-6627002 Msa0833470:intron 35.0%
TGAGTTCAAGGTTTGAACTT+AGG - chr5_4:6627107-6627126 Msa0833470:intron 35.0%
!!! TTTTTGAAGTAAGGGTAACG+TGG + chr5_4:6627275-6627294 None:intergenic 35.0%
CGTTACCCTTACTTCAAAAA+AGG - chr5_4:6627275-6627294 Msa0833470:intron 35.0%
!!! CGGTAACCTTTTTTGAAGTA+AGG + chr5_4:6627284-6627303 None:intergenic 35.0%
!! AAAAAAGGTTACCGGTTTAC+AGG - chr5_4:6627290-6627309 Msa0833470:intron 35.0%
AGAGAAAGTTGTTTGTCGTT+TGG + chr5_4:6627338-6627357 None:intergenic 35.0%
! TTTTTCTTATAGGTACTCCC+AGG + chr5_4:6627377-6627396 None:intergenic 35.0%
GTGGTAGAGATTAAAGTTCA+TGG + chr5_4:6627403-6627422 None:intergenic 35.0%
GACTTCGATGATTATAGTGA+AGG + chr5_4:6627462-6627481 None:intergenic 35.0%
ATCTCAAAAAACAAAGGACG+AGG + chr5_4:6627495-6627514 None:intergenic 35.0%
!! AGAGGCATCTCAAAAAACAA+AGG + chr5_4:6627501-6627520 None:intergenic 35.0%
!!! TGTTTTTTGAGATGCCTCTT+AGG - chr5_4:6627502-6627521 Msa0833470:intron 35.0%
CATGAATGATTACAAGGATG+AGG + chr5_4:6627533-6627552 None:intergenic 35.0%
CTCATCCTTGTAATCATTCA+TGG - chr5_4:6627531-6627550 Msa0833470:intron 35.0%
TGTGACCATGAATGATTACA+AGG + chr5_4:6627539-6627558 None:intergenic 35.0%
! TGGCATGAACAATGTTTTTC+CGG - chr5_4:6627839-6627858 Msa0833470:intron 35.0%
AATTCTAACTACTCCAAACG+TGG + chr5_4:6628277-6628296 None:intergenic 35.0%
!!! TTTTTTGCGTTAGAGAGAGA+AGG - chr5_4:6628372-6628391 Msa0833470:intron 35.0%
TAATTTATCACTCGTGGGAT+TGG - chr5_4:6628415-6628434 Msa0833470:intron 35.0%
TGTACTCAAATGATTTAGGG+AGG - chr5_4:6628639-6628658 Msa0833470:intron 35.0%
AATGATTTAGGGAGGTTCAA+TGG - chr5_4:6628647-6628666 Msa0833470:intron 35.0%
AACATTGACCATTTAGGAAG+GGG - chr5_4:6628919-6628938 Msa0833470:intron 35.0%
! AGTCTTGCATCTTTAAGAAC+AGG - chr5_4:6629200-6629219 Msa0833470:intron 35.0%
GAGGGTTTAGCATATGAAAT+TGG - chr5_4:6629335-6629354 Msa0833470:intron 35.0%
GATGGCATGAATTTATAAGC+AGG + chr5_4:6629570-6629589 None:intergenic 35.0%
GAAAAAATGAGGCTTCAAAC+TGG - chr5_4:6630125-6630144 Msa0833470:intron 35.0%
AATGTTGGAGATGGAAACAT+CGG - chr5_4:6630200-6630219 Msa0833470:intron 35.0%
CATCGGAGAAAACAATTATG+AGG - chr5_4:6630217-6630236 Msa0833470:intron 35.0%
GATCACCAATTAAAGCAACA+TGG + chr5_4:6630289-6630308 None:intergenic 35.0%
GAACCATGAGTTAAATCTCA+AGG - chr5_4:6630522-6630541 Msa0833470:intron 35.0%
CAACCTTGAGATTTAACTCA+TGG + chr5_4:6630528-6630547 None:intergenic 35.0%
CATGAGTTAAATCTCAAGGT+TGG - chr5_4:6630526-6630545 Msa0833470:intron 35.0%
CCCATTGCATATAATCCTAA+TGG + chr5_4:6630586-6630605 None:intergenic 35.0%
ATATGCAATGGGGAATTTGA+CGG - chr5_4:6630594-6630613 Msa0833470:intron 35.0%
ACGGGGATTATATCCAATAA+TGG - chr5_4:6630613-6630632 Msa0833470:intron 35.0%
CGGGGATTATATCCAATAAT+GGG - chr5_4:6630614-6630633 Msa0833470:intron 35.0%
ATGGAGTCAAAGTCAATCTT+TGG + chr5_4:6630699-6630718 None:intergenic 35.0%
ATGACTATCAATAAGAGCCA+AGG - chr5_4:6630787-6630806 Msa0833470:intron 35.0%
! CCATGTGAAAATATGGGTTT+TGG + chr5_4:6630844-6630863 None:intergenic 35.0%
! CCAAAACCCATATTTTCACA+TGG - chr5_4:6630841-6630860 Msa0833470:intron 35.0%
!!! GTGCATCTAGCTGTTTTTAA+AGG - chr5_4:6631046-6631065 Msa0833470:intron 35.0%
GATGTACGGGAAGTAAATTA+TGG + chr5_4:6631681-6631700 None:intergenic 35.0%
! GATAAGCTAGTTGAAGTGTT+TGG - chr5_4:6631890-6631909 Msa0833470:intron 35.0%
ACGAGCTTATAGCTTATTTC+AGG + chr5_4:6632038-6632057 None:intergenic 35.0%
!!! TTGGTGGTTTTGGAATTTAG+TGG + chr5_4:6632309-6632328 None:intergenic 35.0%
! CCACCAATTTTCAAAGGAAA+AGG + chr5_4:6632520-6632539 None:intergenic 35.0%
!! CCTTTTCCTTTGAAAATTGG+TGG - chr5_4:6632517-6632536 Msa0833470:intron 35.0%
! TGACAACCACCAATTTTCAA+AGG + chr5_4:6632526-6632545 None:intergenic 35.0%
GGCTATATTTCGTAACGTAT+TGG + chr5_4:6632670-6632689 None:intergenic 35.0%
!! GGTGTAGTGGGTTATATTTA+TGG + chr5_4:6632731-6632750 None:intergenic 35.0%
TGTTGTGTTTGTGTTTGTGT+TGG + chr5_4:6632781-6632800 None:intergenic 35.0%
! AAGGTGATTGATGGTAGTTA+TGG + chr5_4:6632943-6632962 None:intergenic 35.0%
ATAGTAGAAACATGGTCACA+CGG - chr5_4:6633026-6633045 Msa0833470:CDS 35.0%
ATCGGAGTATGCAAAAAACA+TGG - chr5_4:6633139-6633158 Msa0833470:intron 35.0%
TCGGAGTATGCAAAAAACAT+GGG - chr5_4:6633140-6633159 Msa0833470:intron 35.0%
CTTGCAAAGTTGAGTAGTAA+AGG - chr5_4:6633284-6633303 Msa0833470:CDS 35.0%
! TGGATTCTGGTTATATATGG+CGG - chr5_4:6626116-6626135 Msa0833470:CDS 35.0%
TGAATTAGTTGCTCTCTCTG+GGG + chr5_4:6625666-6625685 None:intergenic 40.0%
AGATTCACTGACAAGGTGAT+TGG + chr5_4:6625723-6625742 None:intergenic 40.0%
AATCACCTTGTCAGTGAATC+TGG - chr5_4:6625722-6625741 Msa0833470:CDS 40.0%
CTCAGCTGATAGTAGAAACA+TGG - chr5_4:6625786-6625805 Msa0833470:CDS 40.0%
ATAGTAGAAACATGGTCCCA+TGG - chr5_4:6625794-6625813 Msa0833470:CDS 40.0%
ATGGATAAACCAACACTCGT+TGG + chr5_4:6625830-6625849 None:intergenic 40.0%
!! GAAGTGATGGATGGTTTAGT+AGG - chr5_4:6625974-6625993 Msa0833470:CDS 40.0%
TTATATATGGCGAAGCGTAG+TGG - chr5_4:6626126-6626145 Msa0833470:CDS 40.0%
!!! GTTGGTTTTGGGATTGGTTT+AGG + chr5_4:6626816-6626835 None:intergenic 40.0%
TATGGTCTTCAGTCTTCACA+TGG + chr5_4:6626847-6626866 None:intergenic 40.0%
TGTGAAGACTGAAGACCATA+AGG - chr5_4:6626847-6626866 Msa0833470:intron 40.0%
AATTGCAGAGAGCTCAACAT+TGG - chr5_4:6626870-6626889 Msa0833470:intron 40.0%
!! TTCTTTAGTTGCTGGCTTCT+TGG + chr5_4:6626927-6626946 None:intergenic 40.0%
AGCCAGCAACTAAAGAAACA+AGG - chr5_4:6626930-6626949 Msa0833470:intron 40.0%
!! AGCCTTGTTTCTTTAGTTGC+TGG + chr5_4:6626935-6626954 None:intergenic 40.0%
AAGAAACAAGGCTTGATACG+AGG - chr5_4:6626942-6626961 Msa0833470:intron 40.0%
AAAATGGACATCTTGGGACA+AGG - chr5_4:6626968-6626987 Msa0833470:intron 40.0%
! GAGGCGTTCATCTTAATTTG+TGG - chr5_4:6627177-6627196 Msa0833470:intron 40.0%
AACTTGCATAGCCTGTAAAC+CGG + chr5_4:6627304-6627323 None:intergenic 40.0%
! TTTTCCAAAGACTACAGCCT+GGG - chr5_4:6627357-6627376 Msa0833470:intron 40.0%
TTCATGGTCACACATGAAGA+TGG - chr5_4:6627547-6627566 Msa0833470:intron 40.0%
TATCTACCCTTCACGAATCT+GGG - chr5_4:6627788-6627807 Msa0833470:intron 40.0%
ATCACTCAATTCTTGGCTAC+CGG + chr5_4:6627956-6627975 None:intergenic 40.0%
CAATTATTGGAACGGTCCAA+GGG + chr5_4:6628097-6628116 None:intergenic 40.0%
TCAATTATTGGAACGGTCCA+AGG + chr5_4:6628098-6628117 None:intergenic 40.0%
CTTATGTTTGCTTCCACGTT+TGG - chr5_4:6628261-6628280 Msa0833470:intron 40.0%
CTATCCCACAATAAAAGCCT+CGG + chr5_4:6628444-6628463 None:intergenic 40.0%
ACATTGACCATTTAGGAAGG+GGG - chr5_4:6628920-6628939 Msa0833470:intron 40.0%
TAAACCCACCACTAACTTAG+CGG + chr5_4:6628951-6628970 None:intergenic 40.0%
! AGACAAGGTCTATTTCTTGC+TGG - chr5_4:6629094-6629113 Msa0833470:intron 40.0%
! GACAAGGTCTATTTCTTGCT+GGG - chr5_4:6629095-6629114 Msa0833470:intron 40.0%
!!! TGAAGGAGGGTTTTGTTAGT+CGG - chr5_4:6629289-6629308 Msa0833470:intron 40.0%
! GGTATGCAATTTTATCGGCA+AGG + chr5_4:6629524-6629543 None:intergenic 40.0%
GCATGAATTTATAAGCAGGG+TGG + chr5_4:6629566-6629585 None:intergenic 40.0%
GACTTCATTGACATCAGAAC+AGG + chr5_4:6630156-6630175 None:intergenic 40.0%
GGTATGTTGATCGAGATTTC+AGG - chr5_4:6630260-6630279 Msa0833470:intron 40.0%
!! GGTGACCATGTTGCTTTAAT+TGG - chr5_4:6630281-6630300 Msa0833470:intron 40.0%
TTGACGGTGTTCAGAAATTC+TGG + chr5_4:6630487-6630506 None:intergenic 40.0%
TGAACACCGTCAAATCTTCT+GGG - chr5_4:6630494-6630513 Msa0833470:intron 40.0%
TATGCAATGGGGAATTTGAC+GGG - chr5_4:6630595-6630614 Msa0833470:intron 40.0%
!! ATGCTGATTTGCAAAGACGA+AGG - chr5_4:6630913-6630932 Msa0833470:intron 40.0%
CGTAGTCATGAAAGATACCA+CGG - chr5_4:6631787-6631806 Msa0833470:intron 40.0%
! AATTTTACCAAACAGAGCCG+TGG + chr5_4:6631807-6631826 None:intergenic 40.0%
GTAACACGAAAAGCTCTGTT+TGG + chr5_4:6632065-6632084 None:intergenic 40.0%
CTTAATACGTAGGCTCTGTT+TGG + chr5_4:6632161-6632180 None:intergenic 40.0%
AATATCCAATCTCTGCAACC+TGG - chr5_4:6632234-6632253 Msa0833470:intron 40.0%
AATTGAAGTCTTTGTGGACC+AGG + chr5_4:6632255-6632274 None:intergenic 40.0%
AGTGGCAATTGAAGTCTTTG+TGG + chr5_4:6632261-6632280 None:intergenic 40.0%
TTCCAAAACCACCAACAGAA+AGG - chr5_4:6632314-6632333 Msa0833470:intron 40.0%
TCCAAAACCACCAACAGAAA+GGG - chr5_4:6632315-6632334 Msa0833470:intron 40.0%
ATTCATACCCTTTCTGTTGG+TGG + chr5_4:6632325-6632344 None:intergenic 40.0%
ATAGATCCATCATAAGAGGG+AGG - chr5_4:6632367-6632386 Msa0833470:intron 40.0%
TAGATCCATCATAAGAGGGA+GGG - chr5_4:6632368-6632387 Msa0833470:intron 40.0%
AGGAAAAGGAGATAGTGACA+CGG + chr5_4:6632506-6632525 None:intergenic 40.0%
! CCGTTCTTCTCACATTTTCT+CGG + chr5_4:6632628-6632647 None:intergenic 40.0%
CCGAGAAAATGTGAGAAGAA+CGG - chr5_4:6632625-6632644 Msa0833470:intron 40.0%
AAGTGTGGAATGGGAGAATT+GGG + chr5_4:6632752-6632771 None:intergenic 40.0%
AAAGTGTGGAATGGGAGAAT+TGG + chr5_4:6632753-6632772 None:intergenic 40.0%
TGGTCGTTAAAGTGTGGAAT+GGG + chr5_4:6632761-6632780 None:intergenic 40.0%
TTGGTCGTTAAAGTGTGGAA+TGG + chr5_4:6632762-6632781 None:intergenic 40.0%
! TTGTGTTGGTCGTTAAAGTG+TGG + chr5_4:6632767-6632786 None:intergenic 40.0%
ATGAGTTAGTTGCTCTCTCT+GGG + chr5_4:6632902-6632921 None:intergenic 40.0%
TATGAGTTAGTTGCTCTCTC+TGG + chr5_4:6632903-6632922 None:intergenic 40.0%
! TTCTCTAGGAAGGTGATTGA+TGG + chr5_4:6632952-6632971 None:intergenic 40.0%
AATCACCTTCCTAGAGAATC+CGG - chr5_4:6632954-6632973 Msa0833470:CDS 40.0%
CTCAGCTGATAGTAGAAACA+TGG - chr5_4:6625786-6625805 Msa0833470:CDS 40.0%
TGGATAAACCAACACTCGTT+GGG + chr5_4:6625829-6625848 None:intergenic 40.0%
ATGGATAAACCAACACTCGT+TGG + chr5_4:6625830-6625849 None:intergenic 40.0%
! GTTGGTTTATCCATAGCAAG+CGG - chr5_4:6633068-6633087 Msa0833470:CDS 40.0%
TGTGCATAGTTCCTGATGAA+CGG - chr5_4:6633111-6633130 Msa0833470:CDS 40.0%
!! GAAGTGATGGATGGTTTGAT+TGG - chr5_4:6633206-6633225 Msa0833470:CDS 40.0%
TGTTCGGTCAGTATTTCTTC+CGG - chr5_4:6633400-6633419 Msa0833470:CDS 40.0%
! GACGTGCTGTTCATAATAGA+TGG - chr5_4:6633501-6633520 Msa0833470:CDS 40.0%
AAGCATGTTGATCAACGATC+AGG - chr5_4:6633527-6633546 Msa0833470:CDS 40.0%
AGCATGTTGATCAACGATCA+GGG - chr5_4:6633528-6633547 Msa0833470:CDS 40.0%
CAGGGGATGTTCACTTTATT+AGG - chr5_4:6633546-6633565 Msa0833470:CDS 40.0%
TTCACTGACAAGGTGATTGG+TGG + chr5_4:6625720-6625739 None:intergenic 45.0%
! GGAGTTTGTTTCAGCTATGG+CGG - chr5_4:6625751-6625770 Msa0833470:CDS 45.0%
GGAGTTATTCCAACGAGTGT+TGG - chr5_4:6625818-6625837 Msa0833470:CDS 45.0%
TCTGATCTTGACCGTTCATC+TGG + chr5_4:6625893-6625912 None:intergenic 45.0%
GCAAAAAACATGGGAGAAGC+TGG - chr5_4:6625917-6625936 Msa0833470:CDS 45.0%
! TGGTATGTCACCGGAAGTTT+TGG - chr5_4:6625937-6625956 Msa0833470:CDS 45.0%
!! ATGTCACCGGAAGTTTTGGT+AGG - chr5_4:6625941-6625960 Msa0833470:CDS 45.0%
GGTTCTCCTACCAAAACTTC+CGG + chr5_4:6625950-6625969 None:intergenic 45.0%
!! GGAAGTTTTGGTAGGAGAAC+CGG - chr5_4:6625949-6625968 Msa0833470:CDS 45.0%
AAACCATCCATCACTTCCTC+CGG + chr5_4:6625971-6625990 None:intergenic 45.0%
ATATGAATTCCCTTCCCCAC+CGG + chr5_4:6626190-6626209 None:intergenic 45.0%
AAGCATGTTGATCAACGGTC+CGG - chr5_4:6626295-6626314 Msa0833470:CDS 45.0%
!!! TGGGAAGTTGGTTTTGGGAT+TGG + chr5_4:6626822-6626841 None:intergenic 45.0%
!!! TGGTCTGGGAAGTTGGTTTT+GGG + chr5_4:6626827-6626846 None:intergenic 45.0%
!! ATGGTCTGGGAAGTTGGTTT+TGG + chr5_4:6626828-6626847 None:intergenic 45.0%
CTTCAGTCTTCACATGGTCT+GGG + chr5_4:6626841-6626860 None:intergenic 45.0%
TCTTCAGTCTTCACATGGTC+TGG + chr5_4:6626842-6626861 None:intergenic 45.0%
GAGCTCTCTGCAATTCCTTA+TGG + chr5_4:6626865-6626884 None:intergenic 45.0%
AGAGAGCTCAACATTGGTGT+TGG - chr5_4:6626876-6626895 Msa0833470:intron 45.0%
ATAGGCGAGCGAGTGTTTAA+GGG + chr5_4:6627248-6627267 None:intergenic 45.0%
AATAGGCGAGCGAGTGTTTA+AGG + chr5_4:6627249-6627268 None:intergenic 45.0%
TAAGGGTAACGTGGCTCAAT+AGG + chr5_4:6627266-6627285 None:intergenic 45.0%
! CTTTTCCAAAGACTACAGCC+TGG - chr5_4:6627356-6627375 Msa0833470:intron 45.0%
! CGATCTGAAGTAGGATGCTT+GGG + chr5_4:6627430-6627449 None:intergenic 45.0%
! TTTGATGGGCGATCTGAAGT+AGG + chr5_4:6627439-6627458 None:intergenic 45.0%
AACAAAGGACGAGGAAGAGA+TGG + chr5_4:6627486-6627505 None:intergenic 45.0%
GTATCTACCCTTCACGAATC+TGG - chr5_4:6627787-6627806 Msa0833470:intron 45.0%
ATTGTGCCCAGATTCGTGAA+GGG + chr5_4:6627797-6627816 None:intergenic 45.0%
AATTGTGCCCAGATTCGTGA+AGG + chr5_4:6627798-6627817 None:intergenic 45.0%
CCACGTCATCACTCAATTCT+TGG + chr5_4:6627963-6627982 None:intergenic 45.0%
! CCAAGAATTGAGTGATGACG+TGG - chr5_4:6627960-6627979 Msa0833470:intron 45.0%
!! TTCAAGAGCAAGTGCTGAAG+CGG - chr5_4:6628003-6628022 Msa0833470:intron 45.0%
GGGTCAATCAGTCCAACATA+AGG + chr5_4:6628077-6628096 None:intergenic 45.0%
ATGTTGGACTGATTGACCCT+TGG - chr5_4:6628078-6628097 Msa0833470:intron 45.0%
! GAGACCGAGGCTTTTATTGT+GGG - chr5_4:6628437-6628456 Msa0833470:intron 45.0%
! CGAGGCTTTTATTGTGGGAT+AGG - chr5_4:6628442-6628461 Msa0833470:intron 45.0%
!! AGACGGTGAACATTGATTCG+TGG - chr5_4:6628863-6628882 Msa0833470:intron 45.0%
TGGGGTCGAAGTCTTTGTAA+AGG + chr5_4:6629021-6629040 None:intergenic 45.0%
ATCCTATCCGATTCAACACG+AGG - chr5_4:6629316-6629335 Msa0833470:intron 45.0%
TCCTATCCGATTCAACACGA+GGG - chr5_4:6629317-6629336 Msa0833470:intron 45.0%
GCTAAACCCTCGTGTTGAAT+CGG + chr5_4:6629326-6629345 None:intergenic 45.0%
! TCTGGAGTGAGAATCTCATC+AGG + chr5_4:6630469-6630488 None:intergenic 45.0%
CTGAACACCGTCAAATCTTC+TGG - chr5_4:6630493-6630512 Msa0833470:intron 45.0%
ATGCAATGGGGAATTTGACG+GGG - chr5_4:6630596-6630615 Msa0833470:intron 45.0%
TTTACTTCCCGTACATCGCA+CGG - chr5_4:6631684-6631703 Msa0833470:intron 45.0%
ATTTAGACCCGTGCGATGTA+CGG + chr5_4:6631695-6631714 None:intergenic 45.0%
AAAGATACCACGGCTCTGTT+TGG - chr5_4:6631797-6631816 Msa0833470:intron 45.0%
!!! ACCCTTTCTGTTGGTGGTTT+TGG + chr5_4:6632319-6632338 None:intergenic 45.0%
ATAGTCCCTCCCTCTTATGA+TGG + chr5_4:6632376-6632395 None:intergenic 45.0%
ATGGGAGAATTGGGTGTAGT+GGG + chr5_4:6632743-6632762 None:intergenic 45.0%
AATGGGAGAATTGGGTGTAG+TGG + chr5_4:6632744-6632763 None:intergenic 45.0%
TGAGTTAGTTGCTCTCTCTG+GGG + chr5_4:6632901-6632920 None:intergenic 45.0%
TCCTGATGAACGGTCAAGAT+CGG - chr5_4:6633121-6633140 Msa0833470:intron 45.0%
GCAAAAAACATGGGAGAAGC+TGG - chr5_4:6625917-6625936 Msa0833470:CDS 45.0%
! TGGTATGTCACCGGAAGTTT+TGG - chr5_4:6625937-6625956 Msa0833470:CDS 45.0%
!! ATGTCACCGGAAGTTTTGGT+AGG - chr5_4:6625941-6625960 Msa0833470:CDS 45.0%
GGTTCTCCTACCAAAACTTC+CGG + chr5_4:6625950-6625969 None:intergenic 45.0%
!! GGAAGTTTTGGTAGGAGAAC+CGG - chr5_4:6625949-6625968 Msa0833470:CDS 45.0%
AAACCATCCATCACTTCCTC+CGG + chr5_4:6625971-6625990 None:intergenic 45.0%
ATATGAATTCCCTTCCCCAC+CGG + chr5_4:6626190-6626209 None:intergenic 45.0%
! TGGTGGTGACAACTCTGTTA+CGG - chr5_4:6633463-6633482 Msa0833470:CDS 45.0%
TGTTACGGCGATGAAGCATA+AGG - chr5_4:6633478-6633497 Msa0833470:CDS 45.0%
GTTACGGCGATGAAGCATAA+GGG - chr5_4:6633479-6633498 Msa0833470:CDS 45.0%
GCATGTTGATCAACGATCAG+GGG - chr5_4:6633529-6633548 Msa0833470:CDS 45.0%
CCACACCAGATTCACTGACA+AGG + chr5_4:6625730-6625749 None:intergenic 50.0%
CCTTGTCAGTGAATCTGGTG+TGG - chr5_4:6625727-6625746 Msa0833470:CDS 50.0%
TGTCAGTGAATCTGGTGTGG+CGG - chr5_4:6625730-6625749 Msa0833470:CDS 50.0%
! GGCGGAGTTTGTTTCAGCTA+TGG - chr5_4:6625748-6625767 Msa0833470:CDS 50.0%
TTTGTTTCAGCTATGGCGGC+AGG - chr5_4:6625755-6625774 Msa0833470:CDS 50.0%
GTAGAAACATGGTCCCATGG+CGG - chr5_4:6625797-6625816 Msa0833470:CDS 50.0%
CGTTGGAATAACTCCGCCAT+GGG + chr5_4:6625813-6625832 None:intergenic 50.0%
TCGTTGGAATAACTCCGCCA+TGG + chr5_4:6625814-6625833 None:intergenic 50.0%
TCCATAGCATCACGTCACAC+AGG - chr5_4:6625845-6625864 Msa0833470:CDS 50.0%
ACCTGTGTGACGTGATGCTA+TGG + chr5_4:6625849-6625868 None:intergenic 50.0%
ATAGCATCACGTCACACAGG+TGG - chr5_4:6625848-6625867 Msa0833470:CDS 50.0%
!! AGTTTTGGTAGGAGAACCGG+AGG - chr5_4:6625952-6625971 Msa0833470:CDS 50.0%
! TGTTCGGTCGGTGTTTCTTC+CGG - chr5_4:6626168-6626187 Msa0833470:CDS 50.0%
GGTGGGGAAGGGAATTCATA+TGG - chr5_4:6626189-6626208 Msa0833470:CDS 50.0%
ATGGCGCATTTATCAGCTGC+CGG - chr5_4:6626208-6626227 Msa0833470:CDS 50.0%
AGCATGTTGATCAACGGTCC+GGG - chr5_4:6626296-6626315 Msa0833470:CDS 50.0%
CTTCACATGGTCTGGGAAGT+TGG + chr5_4:6626834-6626853 None:intergenic 50.0%
TGTTGGGATGACATGACACG+AGG - chr5_4:6627158-6627177 Msa0833470:intron 50.0%
TACTCCCAGGCTGTAGTCTT+TGG + chr5_4:6627364-6627383 None:intergenic 50.0%
!! AGTAGGATGCTTGGGTTGAG+TGG + chr5_4:6627422-6627441 None:intergenic 50.0%
! GCGATCTGAAGTAGGATGCT+TGG + chr5_4:6627431-6627450 None:intergenic 50.0%
AGGATGAGGAAGAGCCTAAG+AGG + chr5_4:6627519-6627538 None:intergenic 50.0%
CACGCTCAAATTACTGCGCT+CGG + chr5_4:6627604-6627623 None:intergenic 50.0%
! GGAGACCGAGGCTTTTATTG+TGG - chr5_4:6628436-6628455 Msa0833470:intron 50.0%
ATCCTCCGCTAAGTTAGTGG+TGG - chr5_4:6628943-6628962 Msa0833470:intron 50.0%
TCCTCCGCTAAGTTAGTGGT+GGG - chr5_4:6628944-6628963 Msa0833470:intron 50.0%
ACCCTCGTGTTGAATCGGAT+AGG + chr5_4:6629321-6629340 None:intergenic 50.0%
ACACGTGAAGTAACGCGTGA+AGG + chr5_4:6630883-6630902 None:intergenic 50.0%
TCACGCGTTACTTCACGTGT+TGG - chr5_4:6630883-6630902 Msa0833470:intron 50.0%
CACGCGTTACTTCACGTGTT+GGG - chr5_4:6630884-6630903 Msa0833470:intron 50.0%
TTACTTCCCGTACATCGCAC+GGG - chr5_4:6631685-6631704 Msa0833470:intron 50.0%
TTTAGACCCGTGCGATGTAC+GGG + chr5_4:6631694-6631713 None:intergenic 50.0%
TATCCTCTATGGCAGCAGGA+TGG - chr5_4:6632991-6633010 Msa0833470:CDS 50.0%
GTAGAAACATGGTCACACGG+CGG - chr5_4:6633029-6633048 Msa0833470:CDS 50.0%
GGAGTTATCCCAACGAGTGT+TGG - chr5_4:6633050-6633069 Msa0833470:CDS 50.0%
TCCGATCTTGACCGTTCATC+AGG + chr5_4:6633125-6633144 None:intergenic 50.0%
!! AGTTTTGGTAGGAGAACCGG+AGG - chr5_4:6625952-6625971 Msa0833470:CDS 50.0%
! TGGTTATATATGGCGGAGCG+TGG - chr5_4:6633355-6633374 Msa0833470:CDS 50.0%
! TTATATATGGCGGAGCGTGG+TGG - chr5_4:6633358-6633377 Msa0833470:CDS 50.0%
TCGGTCAGTATTTCTTCCGG+TGG - chr5_4:6633403-6633422 Msa0833470:CDS 50.0%
CGGTCAGTATTTCTTCCGGT+GGG - chr5_4:6633404-6633423 Msa0833470:CDS 50.0%
GGTCAGTATTTCTTCCGGTG+GGG - chr5_4:6633405-6633424 Msa0833470:CDS 50.0%
AGTATTTCTTCCGGTGGGGA+AGG - chr5_4:6633409-6633428 Msa0833470:CDS 50.0%
GTATTTCTTCCGGTGGGGAA+GGG - chr5_4:6633410-6633429 Msa0833470:CDS 50.0%
GGTGGGGAAGGGAATTCATA+TGG - chr5_4:6626189-6626208 Msa0833470:CDS 50.0%
AACAGAGTTGTCACCACCAC+CGG + chr5_4:6633462-6633481 None:intergenic 50.0%
TTTCAGCTATGGCGGCAGGA+TGG - chr5_4:6625759-6625778 Msa0833470:CDS 55.0%
GGGAGAAGCTGGTATGTCAC+CGG - chr5_4:6625928-6625947 Msa0833470:CDS 55.0%
AGGAGAACCGGAGGAAGTGA+TGG - chr5_4:6625961-6625980 Msa0833470:CDS 55.0%
! GAACCGGAGGAAGTGATGGA+TGG - chr5_4:6625965-6625984 Msa0833470:CDS 55.0%
GTGTTTCTTCCGGTGGGGAA+GGG - chr5_4:6626178-6626197 Msa0833470:CDS 55.0%
CATTTATCAGCTGCCGGTGG+TGG - chr5_4:6626214-6626233 Msa0833470:CDS 55.0%
CACAGAGTTCTCACCACCAC+CGG + chr5_4:6626230-6626249 None:intergenic 55.0%
! TGGTGGTGAGAACTCTGTGG+TGG - chr5_4:6626231-6626250 Msa0833470:CDS 55.0%
TGGTGAGAACTCTGTGGTGG+CGG - chr5_4:6626234-6626253 Msa0833470:CDS 55.0%
GCATGTTGATCAACGGTCCG+GGG - chr5_4:6626297-6626316 Msa0833470:CDS 55.0%
GGAGGATCCCCCTTCCTAAA+TGG + chr5_4:6628930-6628949 None:intergenic 55.0%
GGGATCCTCCGCTAAGTTAG+TGG - chr5_4:6628940-6628959 Msa0833470:intron 55.0%
ACCCACCACTAACTTAGCGG+AGG + chr5_4:6628948-6628967 None:intergenic 55.0%
CGGCGACCCAGAAGATTTGA+CGG + chr5_4:6630503-6630522 None:intergenic 55.0%
GTGGACCAGGTTGCAGAGAT+TGG + chr5_4:6632242-6632261 None:intergenic 55.0%
CCTTCCTAGAGAATCCGGTG+CGG - chr5_4:6632959-6632978 Msa0833470:CDS 55.0%
CTGGTATCCTCTATGGCAGC+AGG - chr5_4:6632987-6633006 Msa0833470:CDS 55.0%
GTTCCATCCTGCTGCCATAG+AGG + chr5_4:6632997-6633016 None:intergenic 55.0%
TCCATAGCAAGCGGTCACAC+AGG - chr5_4:6633077-6633096 Msa0833470:CDS 55.0%
! ACCTGTGTGACCGCTTGCTA+TGG + chr5_4:6633081-6633100 None:intergenic 55.0%
ATAGCAAGCGGTCACACAGG+TGG - chr5_4:6633080-6633099 Msa0833470:CDS 55.0%
GGGAGAAGCTGGTATGTCAC+CGG - chr5_4:6625928-6625947 Msa0833470:CDS 55.0%
AGGAGAACCGGAGGAAGTGA+TGG - chr5_4:6625961-6625980 Msa0833470:CDS 55.0%
! GAACCGGAGGAAGTGATGGA+TGG - chr5_4:6625965-6625984 Msa0833470:CDS 55.0%
! GGGGATCACGACGACTTGTT+CGG - chr5_4:6633384-6633403 Msa0833470:CDS 55.0%
! ATGGCACACTTTTCGGCTGC+CGG - chr5_4:6633440-6633459 Msa0833470:CDS 55.0%
TATGGCGAAGCGTAGTGGCG+CGG - chr5_4:6626131-6626150 Msa0833470:CDS 60.0%
! GTCACGACGGCTTGTTCGGT+CGG - chr5_4:6626156-6626175 Msa0833470:CDS 60.0%
! TCGGTCGGTGTTTCTTCCGG+TGG - chr5_4:6626171-6626190 Msa0833470:CDS 60.0%
! CGGTCGGTGTTTCTTCCGGT+GGG - chr5_4:6626172-6626191 Msa0833470:CDS 60.0%
! GGTCGGTGTTTCTTCCGGTG+GGG - chr5_4:6626173-6626192 Msa0833470:CDS 60.0%
GGTGTTTCTTCCGGTGGGGA+AGG - chr5_4:6626177-6626196 Msa0833470:CDS 60.0%
GCGCATTTATCAGCTGCCGG+TGG - chr5_4:6626211-6626230 Msa0833470:CDS 60.0%
! CGGTGGTGGTGAGAACTCTG+TGG - chr5_4:6626228-6626247 Msa0833470:CDS 60.0%
ACTCGTGGGATTGGAGACCG+AGG - chr5_4:6628424-6628443 Msa0833470:intron 60.0%
! CCGCACCGGATTCTCTAGGA+AGG + chr5_4:6632962-6632981 None:intergenic 60.0%
TCCTAGAGAATCCGGTGCGG+CGG - chr5_4:6632962-6632981 Msa0833470:CDS 60.0%
GGCGGAGCTGGTATCCTCTA+TGG - chr5_4:6632980-6632999 Msa0833470:CDS 60.0%
ATGGCGAAGCGTAGTGGCGC+GGG - chr5_4:6626132-6626151 Msa0833470:CDS 65.0%
! GGGGGTCACGACGGCTTGTT+CGG - chr5_4:6626152-6626171 Msa0833470:CDS 65.0%
TCCGCCGCACCGGATTCTCT+AGG + chr5_4:6632966-6632985 None:intergenic 65.0%
! GCACACTTTTCGGCTGCCGG+TGG - chr5_4:6633443-6633462 Msa0833470:CDS 65.0%
! CACTTTTCGGCTGCCGGTGG+TGG - chr5_4:6633446-6633465 Msa0833470:CDS 65.0%
TGGCGAAGCGTAGTGGCGCG+GGG - chr5_4:6626133-6626152 Msa0833470:CDS 70.0%
TAGTGGCGCGGGGGTCACGA+CGG - chr5_4:6626143-6626162 Msa0833470:CDS 70.0%
AGAATCCGGTGCGGCGGAGC+TGG - chr5_4:6632968-6632987 Msa0833470:CDS 70.0%
GGATACCAGCTCCGCCGCAC+CGG + chr5_4:6632976-6632995 None:intergenic 70.0%
! TATGGCGGAGCGTGGTGGCG+CGG - chr5_4:6633363-6633382 Msa0833470:CDS 70.0%
GGCGAAGCGTAGTGGCGCGG+GGG - chr5_4:6626134-6626153 Msa0833470:CDS 75.0%
! ATGGCGGAGCGTGGTGGCGC+GGG - chr5_4:6633364-6633383 Msa0833470:CDS 75.0%
!! TGGCGGAGCGTGGTGGCGCG+GGG - chr5_4:6633365-6633384 Msa0833470:CDS 80.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 6625638 6633574 6625638 ID=Msa0833470;Name=Msa0833470
chr5_4 mRNA 6625638 6633574 6625638 ID=Msa0833470-mRNA-1;Parent=Msa0833470;Name=Msa0833470-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|0|0|4|0|452
chr5_4 exon 6633355 6633574 6633355 ID=Msa0833470-mRNA-1:exon:2938;Parent=Msa0833470-mRNA-1
chr5_4 exon 6633148 6633345 6633148 ID=Msa0833470-mRNA-1:exon:2937;Parent=Msa0833470-mRNA-1
chr5_4 exon 6632901 6633138 6632901 ID=Msa0833470-mRNA-1:exon:2936;Parent=Msa0833470-mRNA-1
chr5_4 exon 6625638 6626340 6625638 ID=Msa0833470-mRNA-1:exon:2935;Parent=Msa0833470-mRNA-1
chr5_4 CDS 6633355 6633574 6633355 ID=Msa0833470-mRNA-1:cds;Parent=Msa0833470-mRNA-1
chr5_4 CDS 6633148 6633345 6633148 ID=Msa0833470-mRNA-1:cds;Parent=Msa0833470-mRNA-1
chr5_4 CDS 6632901 6633138 6632901 ID=Msa0833470-mRNA-1:cds;Parent=Msa0833470-mRNA-1
chr5_4 CDS 6625638 6626340 6625638 ID=Msa0833470-mRNA-1:cds;Parent=Msa0833470-mRNA-1
Gene Sequence

>Msa0833470

ATGAAAGACATGAAACTTGTTTGGTCCCCAGAGAGAGCAACTAATTCATACATAGACACAGTTCAAGCACTAGCAGTAACCACCAATCACCTTGTCAGTGAATCTGGTGTGGCGGAGTTTGTTTCAGCTATGGCGGCAGGATGGAATGCTCAGCTGATAGTAGAAACATGGTCCCATGGCGGAGTTATTCCAACGAGTGTTGGTTTATCCATAGCATCACGTGGAAGACATGTGTGTATAGTTCCAGATGAACGGTCAAGATCAGAGTATGCAAAAAACATGGGAGAAGCTGGTATGTCACCGGAAGTTTTGGTAGGAGAACCGGAGGAAGTGATGGATGGTTTAGTAGGAATAGATTTCTTGGTTGTTGATTCTCGGAGAAAAGATTTTACAAGAGTGTTGAGGTTAGCAAAGTTGAGTGCTGTGTTGATATGTAAGAATGCTAATTTTATTTCTAAGATGGATTCTGGTTATATATGGCGAAGCGTAGTGGCGCGGGGGTCACGACGGCTTGTTCGGTCGGTGTTTCTTCCGGTGGGGAAGGGAATTCATATGGCGCATTTATCAGCTGCCGGTGGTGGTGAGAACTCTGTGGTGGCGGTGAAGCATAAAGCACGTGTTATTCATAATAGATGGATTAAGCATGTTGATCAACGCATGAAAGACATGAAACTTGTTTGGTCCCCAGAGAGAGCAACTAACTCATACATAGACACAGTTGAAGCCATAACTACCATCAATCACCTTCCTAGAGAATCCGGTGCGGCGGAGCTGGTATCCTCTATGGCAGCAGGATGGAACGCTCAGCTGATAGTAGAAACATGGTCACACGGCGGAGTTATCCCAACGAGTGTTGGTTTATCCATAGCAAGCGGTCACACAGGTGGAAGACACGTGTGCATAGTTCCTGATGAACGGTCAAGATCGGAGTATGCAAAAAACATGGGAGAAGCTGGTATGTCACCGGAAGTTTTGGTAGGAGAACCGGAGGAAGTGATGGATGGTTTGATTGGAATAGATTTCTTGGTTGTTGATTCTCGGAGAAAAGATTTTACAAGAGTGTTGAGGCTTGCAAAGTTGAGTAGTAAAGGCGCTGTGTTGATATGTAAGAATGCTAATTTTATTTCTAAGATGGATTCTGGTTATATATGGCGGAGCGTGGTGGCGCGGGGATCACGACGACTTGTTCGGTCAGTATTTCTTCCGGTGGGGAAGGGAATTCATATGGCACACTTTTCGGCTGCCGGTGGTGGTGACAACTCTGTTACGGCGATGAAGCATAAGGGACGTGCTGTTCATAATAGATGGATTAAGCATGTTGATCAACGATCAGGGGATGTTCACTTTATTAGGAAATGA

Protein sequence

>Msa0833470

MKDMKLVWSPERATNSYIDTVQALAVTTNHLVSESGVAEFVSAMAAGWNAQLIVETWSHGGVIPTSVGLSIASRGRHVCIVPDERSRSEYAKNMGEAGMSPEVLVGEPEEVMDGLVGIDFLVVDSRRKDFTRVLRLAKLSAVLICKNANFISKMDSGYIWRSVVARGSRRLVRSVFLPVGKGIHMAHLSAAGGGENSVVAVKHKARVIHNRWIKHVDQRMKDMKLVWSPERATNSYIDTVEAITTINHLPRESGAAELVSSMAAGWNAQLIVETWSHGGVIPTSVGLSIASGHTGGRHVCIVPDERSRSEYAKNMGEAGMSPEVLVGEPEEVMDGLIGIDFLVVDSRRKDFTRVLRLAKLSSKGAVLICKNANFISKMDSGYIWRSVVARGSRRLVRSVFLPVGKGIHMAHFSAAGGGDNSVTAMKHKGRAVHNRWIKHVDQRSGDVHFIRK*