Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0861860 | XP_003617301.2 | 98.477 | 591 | 8 | 1 | 1 | 591 | 1 | 590 | 0.0 | 1159 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0861860 | sp|Q9LUW5|RH53_ARATH | 66.078 | 510 | 149 | 4 | 1 | 486 | 1 | 510 | 0.0 | 660 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0861860 | G7KCY5 | 98.477 | 591 | 8 | 1 | 1 | 591 | 1 | 590 | 0.0 | 1159 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0015930 | Msa0861860 | 0.849150 | 3.890329e-60 | -8.615850e-47 |
Msa0023010 | Msa0861860 | 0.803896 | 2.800303e-49 | -8.615850e-47 |
Msa0023040 | Msa0861860 | 0.801784 | 7.648498e-49 | -8.615850e-47 |
Msa0026680 | Msa0861860 | 0.826177 | 3.130513e-54 | -8.615850e-47 |
Msa0048550 | Msa0861860 | 0.803906 | 2.786967e-49 | -8.615850e-47 |
Msa0061630 | Msa0861860 | 0.806664 | 7.370339e-50 | -8.615850e-47 |
Msa0118790 | Msa0861860 | 0.825225 | 5.264605e-54 | -8.615850e-47 |
Msa0605630 | Msa0861860 | 0.881546 | 2.194944e-70 | -8.615850e-47 |
Msa0605640 | Msa0861860 | 0.826988 | 2.004605e-54 | -8.615850e-47 |
Msa0605650 | Msa0861860 | 0.851866 | 6.713167e-61 | -8.615850e-47 |
Msa0646580 | Msa0861860 | 0.889538 | 2.214518e-73 | -8.615850e-47 |
Msa0660490 | Msa0861860 | 0.839816 | 1.263399e-57 | -8.615850e-47 |
Msa0663490 | Msa0861860 | 0.800289 | 1.545359e-48 | -8.615850e-47 |
Msa0686210 | Msa0861860 | 0.892466 | 1.546448e-74 | -8.615850e-47 |
Msa0686220 | Msa0861860 | 0.851160 | 1.063495e-60 | -8.615850e-47 |
Msa0708930 | Msa0861860 | 0.821696 | 3.519984e-53 | -8.615850e-47 |
Msa0741230 | Msa0861860 | 0.997530 | 3.331011e-244 | -8.615850e-47 |
Msa0818750 | Msa0861860 | 0.854574 | 1.124604e-61 | -8.615850e-47 |
Msa0833470 | Msa0861860 | 0.805169 | 1.519860e-49 | -8.615850e-47 |
Msa0140630 | Msa0861860 | 0.872629 | 2.746755e-67 | -8.615850e-47 |
Msa0145080 | Msa0861860 | 0.821195 | 4.593239e-53 | -8.615850e-47 |
Msa0145160 | Msa0861860 | 0.802916 | 4.469373e-49 | -8.615850e-47 |
Msa0156370 | Msa0861860 | 0.852591 | 4.176243e-61 | -8.615850e-47 |
Msa0159170 | Msa0861860 | 0.809799 | 1.582315e-50 | -8.615850e-47 |
Msa0162120 | Msa0861860 | 0.831860 | 1.313421e-55 | -8.615850e-47 |
Msa0162130 | Msa0861860 | 0.808813 | 2.575064e-50 | -8.615850e-47 |
Msa0222310 | Msa0861860 | 0.826102 | 3.261768e-54 | -8.615850e-47 |
Msa0375310 | Msa0861860 | 0.844580 | 6.922774e-59 | -8.615850e-47 |
Msa0381500 | Msa0861860 | 0.870350 | 1.559208e-66 | -8.615850e-47 |
Msa0388700 | Msa0861860 | 0.800101 | 1.687458e-48 | -8.615850e-47 |
Msa0402210 | Msa0861860 | 0.822532 | 2.253174e-53 | -8.615850e-47 |
Msa0421500 | Msa0861860 | 0.853186 | 2.822197e-61 | -8.615850e-47 |
Msa0469560 | Msa0861860 | -0.820585 | 6.345234e-53 | -8.615850e-47 |
Msa0482130 | Msa0861860 | 0.809456 | 1.875608e-50 | -8.615850e-47 |
Msa0301620 | Msa0861860 | 0.825106 | 5.617968e-54 | -8.615850e-47 |
Msa0339040 | Msa0861860 | 0.820919 | 5.317707e-53 | -8.615850e-47 |
Msa0345350 | Msa0861860 | 0.842568 | 2.388888e-58 | -8.615850e-47 |
Msa0345390 | Msa0861860 | 0.836721 | 7.925176e-57 | -8.615850e-47 |
Msa0355140 | Msa0861860 | 0.823596 | 1.272047e-53 | -8.615850e-47 |
Msa0483770 | Msa0861860 | 0.823005 | 1.748029e-53 | -8.615850e-47 |
Msa0492530 | Msa0861860 | 0.812159 | 4.877895e-51 | -8.615850e-47 |
Msa0513990 | Msa0861860 | 0.848410 | 6.241219e-60 | -8.615850e-47 |
Msa0515270 | Msa0861860 | -0.810177 | 1.312104e-50 | -8.615850e-47 |
Msa0516260 | Msa0861860 | 0.803508 | 3.370850e-49 | -8.615850e-47 |
Msa0519950 | Msa0861860 | 0.872234 | 3.718164e-67 | -8.615850e-47 |
Msa0550120 | Msa0861860 | 0.883073 | 6.105837e-71 | -8.615850e-47 |
Msa0550130 | Msa0861860 | 0.833425 | 5.371457e-56 | -8.615850e-47 |
Msa0550150 | Msa0861860 | 0.852572 | 4.228342e-61 | -8.615850e-47 |
Msa0566100 | Msa0861860 | 0.804348 | 2.255057e-49 | -8.615850e-47 |
Msa0861860 | Msa0867720 | 0.860951 | 1.443588e-63 | -8.615850e-47 |
Msa0861860 | Msa0867730 | 0.866064 | 3.745333e-65 | -8.615850e-47 |
Msa0861860 | Msa0968610 | 0.873171 | 1.807730e-67 | -8.615850e-47 |
Msa0861860 | Msa1137700 | 0.804192 | 2.431084e-49 | -8.615850e-47 |
Msa0861860 | Msa1191830 | 0.801488 | 8.793303e-49 | -8.615850e-47 |
Msa0861860 | Msa1209260 | 0.810193 | 1.301638e-50 | -8.615850e-47 |
Msa0861860 | Msa1212190 | 0.827184 | 1.800187e-54 | -8.615850e-47 |
Msa0861860 | Msa1212270 | 0.831362 | 1.742222e-55 | -8.615850e-47 |
Msa0861860 | Msa1252800 | 0.804727 | 1.880242e-49 | -8.615850e-47 |
Msa0861860 | Msa1259910 | 0.827973 | 1.163491e-54 | -8.615850e-47 |
Msa0861860 | Msa1353750 | 0.813588 | 2.372762e-51 | -8.615850e-47 |
Msa0861860 | Msa1384190 | 0.801099 | 1.056373e-48 | -8.615850e-47 |
Msa0861860 | Msa1384880 | 0.800602 | 1.334752e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0861860 | MtrunA17_Chr5g0442191 | 98.477 | 591 | 8 | 1 | 1 | 591 | 1 | 590 | 0.0 | 1159 |
Msa0861860 | MtrunA17_Chr3g0095031 | 77.283 | 427 | 94 | 1 | 40 | 463 | 46 | 472 | 0.0 | 677 |
Msa0861860 | MtrunA17_Chr7g0271121 | 66.017 | 359 | 120 | 1 | 91 | 447 | 116 | 474 | 2.33e-165 | 489 |
Msa0861860 | MtrunA17_Chr1g0193491 | 61.867 | 375 | 140 | 1 | 76 | 447 | 109 | 483 | 2.19e-162 | 478 |
Msa0861860 | MtrunA17_Chr1g0204391 | 42.640 | 394 | 197 | 6 | 82 | 450 | 45 | 434 | 2.67e-95 | 303 |
Msa0861860 | MtrunA17_Chr6g0475251 | 43.229 | 384 | 203 | 8 | 77 | 450 | 99 | 477 | 3.83e-90 | 292 |
Msa0861860 | MtrunA17_Chr2g0330401 | 39.542 | 349 | 202 | 5 | 91 | 434 | 106 | 450 | 3.86e-80 | 261 |
Msa0861860 | MtrunA17_Chr1g0176041 | 35.477 | 451 | 274 | 8 | 83 | 517 | 156 | 605 | 2.07e-76 | 254 |
Msa0861860 | MtrunA17_Chr6g0449911 | 37.322 | 351 | 210 | 5 | 83 | 428 | 167 | 512 | 3.63e-73 | 248 |
Msa0861860 | MtrunA17_Chr4g0063551 | 35.934 | 423 | 245 | 8 | 83 | 483 | 142 | 560 | 4.95e-73 | 246 |
Msa0861860 | MtrunA17_Chr3g0107851 | 41.176 | 340 | 187 | 5 | 101 | 429 | 137 | 474 | 6.69e-73 | 243 |
Msa0861860 | MtrunA17_Chr5g0409981 | 38.810 | 353 | 205 | 8 | 86 | 430 | 109 | 458 | 2.81e-72 | 241 |
Msa0861860 | MtrunA17_Chr2g0293631 | 37.356 | 348 | 212 | 4 | 86 | 430 | 501 | 845 | 3.08e-71 | 249 |
Msa0861860 | MtrunA17_Chr3g0121351 | 36.324 | 457 | 261 | 10 | 83 | 520 | 147 | 592 | 3.70e-71 | 240 |
Msa0861860 | MtrunA17_Chr4g0076491 | 39.452 | 365 | 196 | 7 | 87 | 429 | 293 | 654 | 1.26e-69 | 238 |
Msa0861860 | MtrunA17_Chr6g0449741 | 39.286 | 364 | 196 | 7 | 87 | 429 | 255 | 614 | 1.07e-68 | 235 |
Msa0861860 | MtrunA17_Chr7g0236841 | 37.097 | 372 | 221 | 7 | 85 | 451 | 14 | 377 | 2.02e-67 | 225 |
Msa0861860 | MtrunA17_Chr6g0483491 | 37.097 | 372 | 221 | 7 | 85 | 451 | 14 | 377 | 3.75e-67 | 225 |
Msa0861860 | MtrunA17_Chr2g0297261 | 32.041 | 387 | 230 | 7 | 84 | 456 | 37 | 404 | 1.05e-64 | 217 |
Msa0861860 | MtrunA17_Chr1g0200181 | 34.452 | 447 | 247 | 11 | 91 | 504 | 155 | 588 | 4.22e-64 | 221 |
Msa0861860 | MtrunA17_Chr2g0277821 | 37.326 | 359 | 208 | 7 | 86 | 434 | 509 | 860 | 5.22e-64 | 228 |
Msa0861860 | MtrunA17_Chr7g0270131 | 34.794 | 388 | 236 | 7 | 51 | 434 | 213 | 587 | 1.63e-62 | 220 |
Msa0861860 | MtrunA17_Chr1g0157691 | 34.783 | 414 | 238 | 9 | 91 | 483 | 157 | 559 | 2.27e-62 | 216 |
Msa0861860 | MtrunA17_Chr2g0299681 | 34.501 | 371 | 230 | 6 | 85 | 451 | 45 | 406 | 4.18e-60 | 205 |
Msa0861860 | MtrunA17_Chr7g0247181 | 32.626 | 377 | 241 | 5 | 78 | 451 | 137 | 503 | 6.37e-60 | 207 |
Msa0861860 | MtrunA17_Chr7g0247221 | 32.626 | 377 | 241 | 5 | 78 | 451 | 140 | 506 | 9.94e-60 | 207 |
Msa0861860 | MtrunA17_Chr4g0058591 | 38.033 | 305 | 175 | 8 | 90 | 388 | 214 | 510 | 3.72e-59 | 206 |
Msa0861860 | MtrunA17_Chr7g0247191 | 32.275 | 378 | 241 | 6 | 78 | 451 | 147 | 513 | 5.33e-59 | 205 |
Msa0861860 | MtrunA17_Chr4g0070981 | 34.409 | 372 | 229 | 8 | 85 | 451 | 45 | 406 | 9.81e-59 | 202 |
Msa0861860 | MtrunA17_Chr8g0342861 | 33.777 | 376 | 236 | 6 | 85 | 456 | 45 | 411 | 1.64e-57 | 198 |
Msa0861860 | MtrunA17_Chr2g0329931 | 34.043 | 376 | 235 | 6 | 85 | 456 | 45 | 411 | 2.22e-57 | 198 |
Msa0861860 | MtrunA17_Chr2g0300291 | 36.364 | 374 | 220 | 10 | 84 | 447 | 144 | 509 | 4.20e-56 | 202 |
Msa0861860 | MtrunA17_Chr3g0098121 | 35.190 | 395 | 243 | 8 | 60 | 447 | 131 | 519 | 1.47e-55 | 200 |
Msa0861860 | MtrunA17_Chr3g0114081 | 31.771 | 384 | 231 | 9 | 69 | 426 | 4 | 382 | 1.69e-51 | 186 |
Msa0861860 | MtrunA17_Chr4g0040761 | 33.714 | 350 | 211 | 9 | 85 | 424 | 23 | 361 | 1.71e-51 | 189 |
Msa0861860 | MtrunA17_Chr8g0347161 | 31.635 | 373 | 240 | 9 | 99 | 457 | 120 | 491 | 3.40e-50 | 182 |
Msa0861860 | MtrunA17_Chr2g0310581 | 35.068 | 365 | 219 | 8 | 85 | 440 | 57 | 412 | 9.54e-49 | 177 |
Msa0861860 | MtrunA17_Chr8g0347171 | 31.635 | 373 | 240 | 9 | 99 | 457 | 178 | 549 | 9.12e-48 | 176 |
Msa0861860 | MtrunA17_Chr4g0062301 | 32.410 | 361 | 221 | 12 | 94 | 440 | 110 | 461 | 4.99e-47 | 174 |
Msa0861860 | MtrunA17_Chr8g0347151 | 31.429 | 385 | 244 | 9 | 92 | 457 | 207 | 590 | 5.45e-46 | 172 |
Msa0861860 | MtrunA17_Chr2g0307471 | 30.978 | 368 | 234 | 9 | 85 | 440 | 95 | 454 | 5.13e-45 | 167 |
Msa0861860 | MtrunA17_Chr6g0461751 | 29.945 | 364 | 243 | 9 | 80 | 436 | 139 | 497 | 8.17e-45 | 167 |
Msa0861860 | MtrunA17_Chr8g0386451 | 29.140 | 477 | 280 | 17 | 67 | 501 | 270 | 730 | 1.35e-44 | 169 |
Msa0861860 | MtrunA17_Chr7g0236831 | 32.126 | 414 | 206 | 11 | 84 | 425 | 166 | 576 | 4.05e-44 | 168 |
Msa0861860 | MtrunA17_Chr4g0003441 | 31.148 | 366 | 226 | 10 | 106 | 459 | 133 | 484 | 5.80e-44 | 163 |
Msa0861860 | MtrunA17_Chr1g0149251 | 30.959 | 365 | 202 | 13 | 119 | 459 | 2 | 340 | 2.00e-42 | 155 |
Msa0861860 | MtrunA17_Chr1g0192021 | 28.706 | 425 | 247 | 10 | 70 | 444 | 15 | 433 | 4.23e-42 | 160 |
Msa0861860 | MtrunA17_Chr2g0309551 | 27.816 | 435 | 237 | 10 | 83 | 449 | 111 | 536 | 5.68e-40 | 153 |
Msa0861860 | MtrunA17_Chr6g0466611 | 30.790 | 367 | 234 | 9 | 85 | 433 | 146 | 510 | 1.34e-38 | 151 |
Msa0861860 | MtrunA17_Chr5g0443991 | 30.952 | 336 | 206 | 9 | 106 | 426 | 101 | 425 | 1.36e-38 | 151 |
Msa0861860 | MtrunA17_Chr4g0029191 | 27.865 | 445 | 246 | 15 | 85 | 455 | 48 | 491 | 1.63e-38 | 150 |
Msa0861860 | MtrunA17_Chr4g0034411 | 29.921 | 381 | 230 | 11 | 84 | 440 | 71 | 438 | 1.94e-38 | 151 |
Msa0861860 | MtrunA17_Chr2g0301281 | 26.754 | 456 | 259 | 14 | 74 | 455 | 34 | 488 | 2.41e-38 | 149 |
Msa0861860 | MtrunA17_Chr7g0263771 | 27.419 | 372 | 243 | 11 | 91 | 451 | 143 | 498 | 2.95e-36 | 143 |
Msa0861860 | MtrunA17_Chr4g0004301 | 28.235 | 425 | 213 | 14 | 93 | 439 | 41 | 451 | 1.53e-35 | 140 |
Msa0861860 | MtrunA17_Chr5g0429221 | 29.551 | 379 | 240 | 11 | 85 | 451 | 7 | 370 | 5.63e-35 | 137 |
Msa0861860 | MtrunA17_Chr5g0434301 | 28.235 | 425 | 213 | 14 | 93 | 439 | 41 | 451 | 8.36e-35 | 137 |
Msa0861860 | MtrunA17_Chr1g0169331 | 29.381 | 388 | 220 | 14 | 106 | 451 | 16 | 391 | 8.36e-34 | 133 |
Msa0861860 | MtrunA17_Chr1g0179761 | 27.342 | 395 | 235 | 11 | 110 | 469 | 114 | 491 | 9.40e-34 | 134 |
Msa0861860 | MtrunA17_Chr8g0342851 | 29.670 | 364 | 197 | 11 | 110 | 459 | 2 | 320 | 8.48e-30 | 119 |
Msa0861860 | MtrunA17_Chr4g0039471 | 36.019 | 211 | 118 | 4 | 76 | 278 | 218 | 419 | 1.70e-29 | 121 |
Msa0861860 | MtrunA17_Chr3g0145781 | 26.463 | 393 | 248 | 12 | 85 | 442 | 136 | 522 | 3.27e-27 | 115 |
Msa0861860 | MtrunA17_Chr4g0062321 | 31.628 | 215 | 135 | 7 | 186 | 393 | 24 | 233 | 1.33e-23 | 100 |
Msa0861860 | MtrunA17_Chr3g0137891 | 34.091 | 176 | 95 | 5 | 119 | 284 | 2 | 166 | 7.54e-21 | 91.7 |
Msa0861860 | MtrunA17_Chr8g0354761 | 24.496 | 347 | 230 | 9 | 106 | 434 | 33 | 365 | 1.84e-20 | 94.7 |
Msa0861860 | MtrunA17_Chr8g0349951 | 36.000 | 150 | 88 | 4 | 85 | 231 | 14 | 158 | 1.72e-19 | 85.9 |
Msa0861860 | MtrunA17_Chr1g0155201 | 25.517 | 290 | 190 | 10 | 205 | 489 | 14 | 282 | 2.74e-19 | 89.7 |
Msa0861860 | MtrunA17_Chr3g0137901 | 35.398 | 113 | 71 | 2 | 348 | 459 | 65 | 176 | 1.81e-18 | 83.6 |
Msa0861860 | MtrunA17_Chr4g0025141 | 27.830 | 212 | 137 | 7 | 259 | 455 | 15 | 225 | 5.38e-15 | 75.1 |
Msa0861860 | MtrunA17_Chr3g0108851 | 26.857 | 350 | 201 | 15 | 105 | 430 | 19 | 337 | 6.42e-14 | 75.1 |
Msa0861860 | MtrunA17_Chr2g0300871 | 24.147 | 381 | 203 | 15 | 106 | 444 | 46 | 382 | 8.79e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0861860 | AT3G22330.1 | 66.078 | 510 | 149 | 4 | 1 | 486 | 1 | 510 | 0.0 | 660 |
Msa0861860 | AT3G22310.1 | 60.545 | 550 | 138 | 5 | 1 | 511 | 1 | 510 | 0.0 | 638 |
Msa0861860 | AT5G26742.1 | 65.508 | 374 | 125 | 1 | 78 | 447 | 100 | 473 | 1.24e-168 | 498 |
Msa0861860 | AT5G26742.2 | 65.508 | 374 | 125 | 1 | 78 | 447 | 100 | 473 | 1.28e-168 | 498 |
Msa0861860 | AT5G26742.3 | 66.279 | 344 | 112 | 1 | 108 | 447 | 37 | 380 | 1.12e-156 | 464 |
Msa0861860 | AT5G62190.1 | 45.503 | 378 | 193 | 6 | 82 | 450 | 98 | 471 | 6.26e-94 | 302 |
Msa0861860 | AT1G55150.1 | 39.467 | 413 | 220 | 12 | 78 | 467 | 90 | 495 | 1.55e-83 | 270 |
Msa0861860 | AT1G55150.2 | 39.467 | 413 | 220 | 12 | 78 | 467 | 115 | 520 | 1.40e-82 | 268 |
Msa0861860 | AT5G63120.2 | 38.873 | 355 | 208 | 5 | 90 | 439 | 175 | 525 | 1.92e-79 | 262 |
Msa0861860 | AT5G14610.2 | 37.822 | 349 | 204 | 6 | 86 | 429 | 167 | 507 | 6.54e-75 | 251 |
Msa0861860 | AT5G14610.6 | 37.822 | 349 | 204 | 6 | 86 | 429 | 167 | 507 | 8.31e-75 | 251 |
Msa0861860 | AT5G14610.5 | 35.079 | 382 | 238 | 5 | 86 | 462 | 175 | 551 | 1.15e-74 | 251 |
Msa0861860 | AT3G01540.1 | 37.006 | 354 | 213 | 5 | 86 | 434 | 164 | 512 | 1.85e-74 | 249 |
Msa0861860 | AT5G14610.7 | 39.385 | 325 | 187 | 5 | 105 | 424 | 55 | 374 | 3.77e-74 | 246 |
Msa0861860 | AT5G14610.3 | 39.385 | 325 | 187 | 5 | 105 | 424 | 55 | 374 | 3.77e-74 | 246 |
Msa0861860 | AT5G14610.1 | 36.043 | 369 | 226 | 5 | 99 | 462 | 248 | 611 | 3.33e-73 | 248 |
Msa0861860 | AT2G42520.2 | 36.750 | 400 | 236 | 8 | 83 | 466 | 162 | 560 | 3.41e-73 | 246 |
Msa0861860 | AT2G42520.1 | 36.750 | 400 | 236 | 8 | 83 | 466 | 162 | 560 | 3.41e-73 | 246 |
Msa0861860 | AT2G42520.3 | 36.750 | 400 | 236 | 8 | 83 | 466 | 162 | 560 | 3.41e-73 | 246 |
Msa0861860 | AT3G58570.1 | 36.500 | 400 | 237 | 7 | 83 | 466 | 149 | 547 | 3.98e-73 | 246 |
Msa0861860 | AT3G01540.4 | 36.020 | 397 | 242 | 7 | 86 | 475 | 164 | 555 | 1.40e-72 | 244 |
Msa0861860 | AT3G01540.2 | 36.020 | 397 | 242 | 7 | 86 | 475 | 164 | 555 | 1.40e-72 | 244 |
Msa0861860 | AT3G01540.3 | 36.020 | 397 | 242 | 7 | 86 | 475 | 164 | 555 | 1.40e-72 | 244 |
Msa0861860 | AT1G20920.2 | 36.855 | 407 | 237 | 11 | 86 | 480 | 197 | 595 | 1.74e-72 | 248 |
Msa0861860 | AT1G20920.4 | 37.255 | 408 | 234 | 12 | 86 | 480 | 535 | 933 | 5.51e-71 | 248 |
Msa0861860 | AT1G20920.6 | 37.255 | 408 | 234 | 12 | 86 | 480 | 535 | 933 | 5.51e-71 | 248 |
Msa0861860 | AT1G20920.3 | 37.255 | 408 | 234 | 12 | 86 | 480 | 535 | 933 | 5.51e-71 | 248 |
Msa0861860 | AT1G20920.7 | 37.255 | 408 | 234 | 12 | 86 | 480 | 535 | 933 | 5.51e-71 | 248 |
Msa0861860 | AT1G20920.5 | 37.255 | 408 | 234 | 12 | 86 | 480 | 535 | 933 | 5.51e-71 | 248 |
Msa0861860 | AT1G20920.1 | 37.255 | 408 | 234 | 12 | 86 | 480 | 535 | 933 | 5.51e-71 | 248 |
Msa0861860 | AT1G31970.1 | 41.691 | 343 | 186 | 8 | 98 | 429 | 132 | 471 | 1.34e-70 | 237 |
Msa0861860 | AT3G58510.1 | 35.753 | 372 | 226 | 5 | 105 | 463 | 176 | 547 | 4.96e-69 | 235 |
Msa0861860 | AT3G58510.3 | 35.753 | 372 | 226 | 5 | 105 | 463 | 176 | 547 | 4.96e-69 | 235 |
Msa0861860 | AT3G58510.2 | 35.753 | 372 | 226 | 5 | 105 | 463 | 176 | 547 | 4.96e-69 | 235 |
Msa0861860 | AT3G06480.1 | 36.963 | 349 | 212 | 5 | 86 | 430 | 441 | 785 | 4.44e-68 | 239 |
Msa0861860 | AT2G33730.1 | 38.889 | 360 | 195 | 7 | 87 | 424 | 320 | 676 | 4.30e-67 | 232 |
Msa0861860 | AT5G60990.1 | 34.977 | 426 | 255 | 9 | 83 | 490 | 12 | 433 | 1.76e-66 | 224 |
Msa0861860 | AT3G19760.1 | 32.419 | 401 | 231 | 8 | 70 | 456 | 32 | 406 | 5.82e-66 | 221 |
Msa0861860 | AT2G47330.1 | 36.693 | 387 | 220 | 9 | 58 | 434 | 213 | 584 | 5.22e-65 | 227 |
Msa0861860 | AT5G14610.4 | 35.821 | 335 | 200 | 7 | 86 | 415 | 175 | 499 | 1.02e-62 | 215 |
Msa0861860 | AT5G63120.3 | 38.387 | 310 | 182 | 5 | 90 | 394 | 175 | 480 | 1.61e-62 | 214 |
Msa0861860 | AT5G63120.4 | 38.387 | 310 | 182 | 5 | 90 | 394 | 175 | 480 | 1.61e-62 | 214 |
Msa0861860 | AT5G63120.5 | 38.387 | 310 | 182 | 5 | 90 | 394 | 175 | 480 | 1.61e-62 | 214 |
Msa0861860 | AT5G63120.1 | 38.487 | 304 | 178 | 5 | 90 | 388 | 175 | 474 | 1.79e-62 | 214 |
Msa0861860 | AT5G51280.1 | 33.557 | 447 | 259 | 11 | 91 | 513 | 157 | 589 | 4.17e-62 | 216 |
Msa0861860 | AT4G00660.1 | 32.891 | 377 | 240 | 5 | 78 | 451 | 129 | 495 | 4.71e-61 | 211 |
Msa0861860 | AT4G00660.2 | 32.891 | 377 | 240 | 5 | 78 | 451 | 129 | 495 | 4.71e-61 | 211 |
Msa0861860 | AT4G33370.1 | 33.784 | 444 | 259 | 10 | 91 | 513 | 108 | 537 | 1.67e-60 | 210 |
Msa0861860 | AT1G51380.1 | 31.759 | 381 | 227 | 7 | 85 | 451 | 27 | 388 | 2.37e-60 | 206 |
Msa0861860 | AT3G61240.2 | 32.637 | 383 | 233 | 7 | 78 | 451 | 122 | 488 | 2.50e-59 | 206 |
Msa0861860 | AT3G61240.1 | 32.637 | 383 | 233 | 7 | 78 | 451 | 122 | 488 | 2.50e-59 | 206 |
Msa0861860 | AT2G45810.1 | 33.247 | 385 | 241 | 7 | 78 | 458 | 152 | 524 | 2.56e-59 | 207 |
Msa0861860 | AT3G09620.1 | 33.663 | 404 | 225 | 9 | 86 | 480 | 402 | 771 | 3.60e-59 | 213 |
Msa0861860 | AT3G09620.2 | 33.663 | 404 | 225 | 9 | 86 | 480 | 403 | 772 | 3.99e-59 | 213 |
Msa0861860 | AT1G72730.1 | 33.842 | 393 | 246 | 7 | 69 | 456 | 29 | 412 | 5.35e-59 | 202 |
Msa0861860 | AT3G13920.1 | 34.483 | 377 | 232 | 8 | 85 | 456 | 44 | 410 | 1.09e-58 | 202 |
Msa0861860 | AT1G28180.1 | 36.076 | 316 | 191 | 5 | 115 | 424 | 8 | 318 | 1.58e-58 | 200 |
Msa0861860 | AT3G13920.3 | 34.483 | 377 | 232 | 8 | 85 | 456 | 34 | 400 | 2.62e-58 | 201 |
Msa0861860 | AT3G13920.4 | 34.483 | 377 | 227 | 9 | 85 | 456 | 44 | 405 | 7.94e-58 | 199 |
Msa0861860 | AT1G16280.1 | 33.413 | 419 | 255 | 9 | 64 | 470 | 43 | 449 | 8.36e-58 | 202 |
Msa0861860 | AT1G71370.1 | 33.994 | 353 | 222 | 5 | 84 | 426 | 20 | 371 | 1.25e-57 | 203 |
Msa0861860 | AT3G06480.2 | 35.443 | 316 | 196 | 5 | 86 | 397 | 441 | 752 | 4.59e-57 | 205 |
Msa0861860 | AT3G13920.2 | 34.332 | 367 | 226 | 8 | 85 | 446 | 44 | 400 | 6.36e-57 | 197 |
Msa0861860 | AT3G13920.5 | 34.332 | 367 | 226 | 8 | 85 | 446 | 48 | 404 | 6.94e-57 | 197 |
Msa0861860 | AT1G54270.1 | 34.301 | 379 | 230 | 9 | 85 | 456 | 44 | 410 | 3.12e-56 | 195 |
Msa0861860 | AT4G16630.1 | 36.290 | 372 | 222 | 9 | 84 | 447 | 171 | 535 | 6.83e-56 | 202 |
Msa0861860 | AT1G54270.2 | 34.301 | 379 | 225 | 10 | 85 | 456 | 44 | 405 | 2.85e-55 | 192 |
Msa0861860 | AT5G05450.1 | 32.869 | 359 | 221 | 7 | 87 | 426 | 23 | 380 | 5.88e-54 | 193 |
Msa0861860 | AT1G77030.1 | 33.623 | 345 | 218 | 6 | 85 | 424 | 33 | 371 | 2.05e-53 | 196 |
Msa0861860 | AT3G18600.1 | 32.877 | 365 | 229 | 10 | 85 | 440 | 94 | 451 | 7.11e-52 | 187 |
Msa0861860 | AT5G08610.1 | 32.546 | 381 | 232 | 12 | 92 | 453 | 394 | 768 | 9.36e-52 | 191 |
Msa0861860 | AT5G65900.1 | 33.875 | 369 | 221 | 12 | 85 | 440 | 159 | 517 | 3.00e-51 | 187 |
Msa0861860 | AT5G63630.2 | 31.759 | 381 | 245 | 8 | 92 | 458 | 260 | 639 | 4.36e-50 | 185 |
Msa0861860 | AT5G63630.1 | 31.759 | 381 | 245 | 8 | 92 | 458 | 66 | 445 | 1.71e-49 | 180 |
Msa0861860 | AT5G08620.1 | 32.540 | 378 | 230 | 12 | 95 | 453 | 95 | 466 | 2.06e-48 | 177 |
Msa0861860 | AT3G02065.3 | 30.602 | 415 | 253 | 10 | 47 | 431 | 56 | 465 | 4.04e-48 | 176 |
Msa0861860 | AT3G02065.2 | 30.602 | 415 | 253 | 10 | 47 | 431 | 56 | 465 | 4.04e-48 | 176 |
Msa0861860 | AT1G63250.1 | 32.865 | 356 | 224 | 10 | 87 | 427 | 335 | 690 | 2.93e-46 | 174 |
Msa0861860 | AT3G02065.1 | 32.416 | 327 | 207 | 9 | 114 | 431 | 7 | 328 | 1.34e-45 | 165 |
Msa0861860 | AT2G07750.1 | 33.146 | 356 | 223 | 10 | 87 | 427 | 382 | 737 | 2.39e-45 | 172 |
Msa0861860 | AT5G11170.1 | 31.025 | 361 | 233 | 10 | 106 | 459 | 72 | 423 | 4.67e-45 | 165 |
Msa0861860 | AT5G11200.1 | 31.025 | 361 | 233 | 10 | 106 | 459 | 72 | 423 | 4.67e-45 | 165 |
Msa0861860 | AT5G11170.2 | 31.322 | 348 | 223 | 10 | 119 | 459 | 2 | 340 | 6.53e-43 | 157 |
Msa0861860 | AT1G12770.2 | 27.338 | 417 | 250 | 7 | 84 | 447 | 114 | 530 | 2.37e-42 | 160 |
Msa0861860 | AT1G12770.1 | 27.338 | 417 | 250 | 7 | 84 | 447 | 114 | 530 | 2.37e-42 | 160 |
Msa0861860 | AT3G16840.2 | 31.281 | 406 | 203 | 13 | 106 | 439 | 217 | 618 | 3.76e-41 | 160 |
Msa0861860 | AT3G16840.1 | 31.281 | 406 | 203 | 13 | 106 | 439 | 216 | 617 | 4.31e-41 | 159 |
Msa0861860 | AT4G09730.1 | 31.551 | 374 | 222 | 12 | 84 | 432 | 116 | 480 | 1.80e-40 | 156 |
Msa0861860 | AT5G11200.3 | 28.333 | 420 | 246 | 13 | 87 | 459 | 53 | 464 | 1.00e-39 | 151 |
Msa0861860 | AT5G54910.1 | 29.919 | 371 | 237 | 10 | 83 | 440 | 74 | 434 | 2.90e-39 | 154 |
Msa0861860 | AT4G15850.1 | 27.273 | 440 | 234 | 11 | 94 | 457 | 45 | 474 | 8.33e-39 | 150 |
Msa0861860 | AT1G71280.2 | 32.911 | 316 | 179 | 8 | 84 | 392 | 21 | 310 | 4.25e-38 | 144 |
Msa0861860 | AT5G11200.2 | 27.990 | 418 | 230 | 14 | 106 | 459 | 72 | 482 | 5.52e-38 | 147 |
Msa0861860 | AT1G71280.1 | 32.808 | 317 | 180 | 8 | 84 | 393 | 21 | 311 | 1.47e-36 | 142 |
Msa0861860 | AT2G40700.1 | 27.465 | 426 | 231 | 11 | 106 | 455 | 57 | 480 | 2.71e-36 | 144 |
Msa0861860 | AT3G09720.2 | 27.049 | 366 | 252 | 7 | 91 | 451 | 152 | 507 | 6.51e-35 | 139 |
Msa0861860 | AT3G09720.1 | 27.049 | 366 | 252 | 7 | 91 | 451 | 152 | 507 | 6.51e-35 | 139 |
Msa0861860 | AT4G34910.1 | 28.052 | 385 | 223 | 7 | 84 | 418 | 50 | 430 | 2.77e-33 | 135 |
Msa0861860 | AT1G51380.2 | 31.556 | 225 | 144 | 4 | 85 | 307 | 27 | 243 | 7.80e-31 | 122 |
Msa0861860 | AT3G53110.1 | 27.907 | 344 | 219 | 11 | 118 | 441 | 132 | 466 | 3.80e-30 | 124 |
Msa0861860 | AT3G06980.1 | 27.595 | 395 | 246 | 13 | 82 | 442 | 376 | 764 | 4.54e-30 | 126 |
Msa0861860 | AT1G51380.4 | 32.110 | 218 | 133 | 4 | 70 | 285 | 19 | 223 | 6.46e-30 | 120 |
Msa0861860 | AT1G51380.3 | 32.110 | 218 | 133 | 4 | 70 | 285 | 19 | 223 | 8.16e-30 | 120 |
Msa0861860 | AT1G28180.2 | 35.652 | 115 | 70 | 2 | 109 | 219 | 2 | 116 | 3.23e-15 | 72.8 |
Msa0861860 | AT1G59990.2 | 37.143 | 105 | 64 | 2 | 327 | 430 | 426 | 529 | 1.92e-11 | 67.4 |
Msa0861860 | AT1G59990.1 | 37.143 | 105 | 64 | 2 | 327 | 430 | 426 | 529 | 1.94e-11 | 67.4 |
Find 204 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGGATACTATCTGTGTTTA+TGG | 0.088373 | 5_4:+61345255 | Msa0861860:CDS |
AACAAATATCTCTGAATTAT+TGG | 0.139299 | 5_4:-61347609 | None:intergenic |
CTACGAGTCGGCGCCTAATT+TGG | 0.150060 | 5_4:+61345236 | Msa0861860:CDS |
GATATTTCATTAAGTTAAAA+TGG | 0.218770 | 5_4:-61348751 | None:intergenic |
TCCTTTGGTTCCGGTGATTC+AGG | 0.244361 | 5_4:+61348559 | Msa0861860:CDS |
GGATCCTCTGGCTTTGGTTT+TGG | 0.250641 | 5_4:+61345173 | Msa0861860:CDS |
GTAATAGGATTTGAGGGTTT+AGG | 0.250646 | 5_4:-61344067 | None:intergenic |
GGTGGATTCGGTGGTGGTTT+TGG | 0.258955 | 5_4:+61348661 | Msa0861860:CDS |
TTCAGCAAACAAGGTGGTTT+TGG | 0.273712 | 5_4:+61348610 | Msa0861860:CDS |
TAATAGGATTTGAGGGTTTA+GGG | 0.277278 | 5_4:-61344066 | None:intergenic |
GGTGGTGGCGGTGGTGGATT+TGG | 0.301297 | 5_4:+61348370 | Msa0861860:CDS |
GGCGGTGGTGGATTTGGTGG+TGG | 0.314193 | 5_4:+61348376 | Msa0861860:CDS |
AAGATCAATCCAGGACTCTT+AGG | 0.323614 | 5_4:+61347693 | Msa0861860:CDS |
GATGCTTCAAGTTGGGTTCC+AGG | 0.324647 | 5_4:+61345425 | Msa0861860:CDS |
CTTCTCCAATACACAGTGAT+AGG | 0.326627 | 5_4:-61348874 | None:intergenic |
TTTAGTGGTGGCGGCAGATT+TGG | 0.327034 | 5_4:+61348349 | Msa0861860:CDS |
TTGCCACTAAAACATTAAAA+TGG | 0.334308 | 5_4:-61346379 | None:intergenic |
GAGATATTTGTTCACCGATC+TGG | 0.335060 | 5_4:+61347620 | Msa0861860:CDS |
CAGATGAGGCAGCTTGATTA+TGG | 0.339395 | 5_4:+61345297 | Msa0861860:CDS |
TGGATACTATCTGTGTTTAT+GGG | 0.339756 | 5_4:+61345256 | Msa0861860:CDS |
AAAACCCTAACGAGTGTAAT+AGG | 0.340354 | 5_4:-61344082 | None:intergenic |
TCATTTCCTCTAAAGTTTAC+CGG | 0.343885 | 5_4:+61348829 | Msa0861860:three_prime_UTR |
ACACAGATAGTATCCAAATT+AGG | 0.347866 | 5_4:-61345249 | None:intergenic |
TCTGGTCGTTTCGGCTCCTT+TGG | 0.349279 | 5_4:+61348544 | Msa0861860:CDS |
ACAAATATCTCTGAATTATT+GGG | 0.364531 | 5_4:-61347608 | None:intergenic |
AGAAGGCATACTTTAATTAG+AGG | 0.364613 | 5_4:-61346101 | None:intergenic |
AGGAAAGGATCCTCTGGCTT+TGG | 0.365920 | 5_4:+61345167 | Msa0861860:CDS |
GCGGTGGTGGATTTGGTGGT+GGG | 0.366128 | 5_4:+61348377 | Msa0861860:CDS |
CGTTTCGGCTCCTTTGGTTC+CGG | 0.369745 | 5_4:+61348550 | Msa0861860:CDS |
TCGGGTAAACCTGGCGCATT+TGG | 0.373148 | 5_4:+61348694 | Msa0861860:CDS |
GAGCTCAGTGGCGGCGGTGG+TGG | 0.374607 | 5_4:-61344216 | None:intergenic |
TCAGGATATTGTCGCTGCTT+TGG | 0.375607 | 5_4:+61344400 | Msa0861860:CDS |
ATATCTTCTCCACATCTTCC+TGG | 0.375700 | 5_4:-61345443 | None:intergenic |
CAAATCCTATTACACTCGTT+AGG | 0.387459 | 5_4:+61344077 | Msa0861860:five_prime_UTR |
AGGCAAGCTTTATCAAGAAA+TGG | 0.389650 | 5_4:+61349000 | Msa0861860:three_prime_UTR |
CGGTGGTGGATTTGGTGGTG+GGG | 0.391305 | 5_4:+61348378 | Msa0861860:CDS |
TCTGGAGGCTACAGTAATTC+AGG | 0.391318 | 5_4:+61348436 | Msa0861860:CDS |
AATCTCGGCGGCGGCGGGGA+TGG | 0.397597 | 5_4:-61344186 | None:intergenic |
GGTGGCGGTGGTGGATTTGG+TGG | 0.399718 | 5_4:+61348373 | Msa0861860:CDS |
CAGAGAGAAAGGACACTTGC+TGG | 0.399874 | 5_4:+61346344 | Msa0861860:CDS |
GGAAGATGTGGAGAAGATAT+TGG | 0.401318 | 5_4:+61345446 | Msa0861860:CDS |
AAGAGAATCTCGGCGGCGGC+GGG | 0.401354 | 5_4:-61344191 | None:intergenic |
GCCTCATCTGTTGAGAGATC+GGG | 0.401835 | 5_4:-61345284 | None:intergenic |
TGGTGGATTCGGTGGTGGTT+CGG | 0.403624 | 5_4:+61348630 | Msa0861860:CDS |
ATTATTGATCTTCTTAATAG+AGG | 0.404477 | 5_4:+61345351 | Msa0861860:CDS |
TCTGGTGGATCAAGCTCATA+TGG | 0.406470 | 5_4:+61348496 | Msa0861860:CDS |
CTTACAAGATCAATGGTTAG+AGG | 0.406494 | 5_4:-61345558 | None:intergenic |
ATATCACCATCGTTTCTTGA+TGG | 0.408867 | 5_4:+61348777 | Msa0861860:three_prime_UTR |
TACATGCCGGTAAACTTTAG+AGG | 0.411665 | 5_4:-61348835 | None:intergenic |
AGATTTGGTGGTGGCGGTGG+TGG | 0.413951 | 5_4:+61348364 | Msa0861860:CDS |
GTCTTGAGATCGCGAAGCTT+GGG | 0.415828 | 5_4:+61344372 | Msa0861860:CDS |
CGCTCTGGTGGATTCGGTGG+TGG | 0.416984 | 5_4:+61348655 | Msa0861860:CDS |
TCGGATCGCTCTGGTGGATT+CGG | 0.418018 | 5_4:+61348649 | Msa0861860:CDS |
GCTTCTTCTGCTTCTCGCGC+TGG | 0.418631 | 5_4:+61344293 | Msa0861860:CDS |
AGAAGAAGCGCGGAATAGTA+AGG | 0.421344 | 5_4:-61344279 | None:intergenic |
TGCCGTTGATACTGCATCAC+TGG | 0.421898 | 5_4:+61348321 | Msa0861860:CDS |
ACACTTGCTGGCTTCAGAAA+TGG | 0.423030 | 5_4:+61346356 | Msa0861860:CDS |
AGTAGATCTGGTGGATCCTC+TGG | 0.426899 | 5_4:+61348583 | Msa0861860:CDS |
ACGGAGCTCAGTGGCGGCGG+TGG | 0.427658 | 5_4:-61344219 | None:intergenic |
GGTGGTGGATTTGGTGGTGG+GGG | 0.429754 | 5_4:+61348379 | Msa0861860:CDS |
TGAATTGGTGAAAATCGAAA+TGG | 0.433601 | 5_4:-61344112 | None:intergenic |
AAATCCTATTACACTCGTTA+GGG | 0.434392 | 5_4:+61344078 | Msa0861860:five_prime_UTR |
CATTTGGTGATCGTCGTGGC+AGG | 0.437006 | 5_4:+61348710 | Msa0861860:CDS |
CTGAATGATCTTATCCATGA+TGG | 0.442475 | 5_4:-61344710 | None:intergenic |
GACTAGAGAACTTGCGAAGC+AGG | 0.450743 | 5_4:+61345200 | Msa0861860:CDS |
GCATCACTGGGCGGATTTAG+TGG | 0.451004 | 5_4:+61348334 | Msa0861860:CDS |
CTTCGTCAAGAATAACAAAC+TGG | 0.453802 | 5_4:-61345395 | None:intergenic |
GGATCAAGCTCTGGTCGTTT+CGG | 0.456113 | 5_4:+61348535 | Msa0861860:CDS |
CGCGAAGCTTGGGATTTCTC+AGG | 0.456686 | 5_4:+61344382 | Msa0861860:CDS |
GGCAGATTTGGTGGTGGCGG+TGG | 0.457234 | 5_4:+61348361 | Msa0861860:CDS |
GAACTCACAAGATCAACATT+AGG | 0.457570 | 5_4:-61346431 | None:intergenic |
AACGAGTGTAATAGGATTTG+AGG | 0.457702 | 5_4:-61344074 | None:intergenic |
CGGGGATGGTTCGCCGTGAG+AGG | 0.459848 | 5_4:-61344172 | None:intergenic |
TGCCTCATCTGTTGAGAGAT+CGG | 0.462495 | 5_4:-61345285 | None:intergenic |
TATTGAACGCAAACCTGAAT+GGG | 0.465119 | 5_4:-61344449 | None:intergenic |
CCGATCAGATGCTTCAAGTT+GGG | 0.465196 | 5_4:+61345418 | Msa0861860:CDS |
TCATATGGTGAAAATAGATA+TGG | 0.472539 | 5_4:+61348511 | Msa0861860:CDS |
GAAGAGAATCTCGGCGGCGG+CGG | 0.473316 | 5_4:-61344192 | None:intergenic |
GGTGATTCAGGCAGTAGATC+TGG | 0.473447 | 5_4:+61348571 | Msa0861860:CDS |
CTCAATAGTCCTAAGAGTCC+TGG | 0.473742 | 5_4:-61347702 | None:intergenic |
GGTCTTGAGATCGCGAAGCT+TGG | 0.475328 | 5_4:+61344371 | Msa0861860:CDS |
TTATTGAACGCAAACCTGAA+TGG | 0.476985 | 5_4:-61344450 | None:intergenic |
GGTCGAGCAAGAACAGGAAC+TGG | 0.480998 | 5_4:+61344664 | Msa0861860:CDS |
GTTCACCGATCTGGACGAAC+TGG | 0.481054 | 5_4:+61347629 | Msa0861860:CDS |
GGCAAGCTTTATCAAGAAAT+GGG | 0.483737 | 5_4:+61349001 | Msa0861860:three_prime_UTR |
CAGCAAGTGTCCTTTCTCTC+TGG | 0.484298 | 5_4:-61346343 | None:intergenic |
ATGATTGGTCGAGCAAGAAC+AGG | 0.484418 | 5_4:+61344658 | Msa0861860:CDS |
ATATCACGACCTTGCATAGC+AGG | 0.484798 | 5_4:-61344637 | None:intergenic |
GTTAACTGCTTTATCCAAGT+TGG | 0.487113 | 5_4:-61345516 | None:intergenic |
GGCGGCAGATTTGGTGGTGG+CGG | 0.491791 | 5_4:+61348358 | Msa0861860:CDS |
ACGAGTGTAATAGGATTTGA+GGG | 0.491837 | 5_4:-61344073 | None:intergenic |
GCAACTGATGTTGCTTCACG+TGG | 0.496446 | 5_4:+61346398 | Msa0861860:CDS |
TATCACAAGTCCAGAGAGAA+AGG | 0.496958 | 5_4:+61346333 | Msa0861860:CDS |
GAATCCCTATCACTGTGTAT+TGG | 0.501895 | 5_4:+61348869 | Msa0861860:three_prime_UTR |
TAGTGGTAATCATGGTGAAT+TGG | 0.505536 | 5_4:-61344127 | None:intergenic |
GGGGATGGTTCGCCGTGAGA+GGG | 0.505588 | 5_4:-61344171 | None:intergenic |
GGATACTATCTGTGTTTATG+GGG | 0.508750 | 5_4:+61345257 | Msa0861860:CDS |
TCTCTGCAACAATGCCAACT+TGG | 0.508889 | 5_4:+61345502 | Msa0861860:CDS |
GTCGCTGCTTTGGAGAAGAA+AGG | 0.510304 | 5_4:+61344410 | Msa0861860:CDS |
CAGGCGAGGAAAGGATCCTC+TGG | 0.511594 | 5_4:+61345161 | Msa0861860:intron |
AGGACTATTGAGCGCGATGT+AGG | 0.511681 | 5_4:+61347713 | Msa0861860:CDS |
AATACACAGTGATAGGGATT+CGG | 0.512446 | 5_4:-61348867 | None:intergenic |
AGTGGTGGCGGCAGATTTGG+TGG | 0.513908 | 5_4:+61348352 | Msa0861860:CDS |
AGCAAAACTTACAAGATCAA+TGG | 0.518388 | 5_4:-61345565 | None:intergenic |
TAAAACTCTTAGAAAGCTGT+GGG | 0.521188 | 5_4:+61349028 | Msa0861860:three_prime_UTR |
GCCGATCAGATGCTTCAAGT+TGG | 0.521989 | 5_4:+61345417 | Msa0861860:CDS |
AGATATGGCGGATCAAGCTC+TGG | 0.522047 | 5_4:+61348526 | Msa0861860:CDS |
TTTATACACAAGATCAATCC+AGG | 0.523638 | 5_4:+61347684 | Msa0861860:CDS |
GGGTTGTGATTTAGAGTGAA+AGG | 0.523987 | 5_4:-61344258 | None:intergenic |
ACTGGTCGTGCTGGTAAGAA+AGG | 0.525068 | 5_4:+61347647 | Msa0861860:CDS |
TCTGGACGAACTGGTCGTGC+TGG | 0.526650 | 5_4:+61347638 | Msa0861860:CDS |
GAATTGGTGAAAATCGAAAT+GGG | 0.526839 | 5_4:-61344111 | None:intergenic |
GTGACGGAGCTCAGTGGCGG+CGG | 0.534024 | 5_4:-61344222 | None:intergenic |
TCTAAAGTTTACCGGCATGT+AGG | 0.534558 | 5_4:+61348837 | Msa0861860:three_prime_UTR |
ATTCAGTTTAATGCTAAACA+TGG | 0.536360 | 5_4:+61344727 | Msa0861860:CDS |
CTCTTGTAGGAACATGCAAA+AGG | 0.540991 | 5_4:+61346212 | Msa0861860:intron |
TCTGATGCGTATGTCAAAGC+AGG | 0.544061 | 5_4:+61346068 | Msa0861860:CDS |
CTGGGCGGATTTAGTGGTGG+CGG | 0.546376 | 5_4:+61348340 | Msa0861860:CDS |
GGTGAAAATCGAAATGGGAA+TGG | 0.546706 | 5_4:-61344106 | None:intergenic |
TTTGTTGGTGGCCGTTCTGG+AGG | 0.551399 | 5_4:+61348421 | Msa0861860:CDS |
AGATCTACTGCCTGAATCAC+CGG | 0.553069 | 5_4:-61348569 | None:intergenic |
TTTACCGGCATGTAGGTTCG+TGG | 0.554354 | 5_4:+61348844 | Msa0861860:three_prime_UTR |
CTATCACTGTGTATTGGAGA+AGG | 0.556697 | 5_4:+61348875 | Msa0861860:three_prime_UTR |
GGTGGTGGTTCGGATCGCTC+TGG | 0.559716 | 5_4:+61348640 | Msa0861860:CDS |
CGCGAGAAGCAGAAGAAGCG+CGG | 0.560768 | 5_4:-61344289 | None:intergenic |
TGGAGATTCTGATCAGAAGC+TGG | 0.561614 | 5_4:+61346016 | Msa0861860:CDS |
GCCTGAATCACCGGAACCAA+AGG | 0.562334 | 5_4:-61348560 | None:intergenic |
TCTCCATGCAATGCCTCACA+TGG | 0.563344 | 5_4:-61346308 | None:intergenic |
TCTGAGGATAGTGGTAATCA+TGG | 0.564698 | 5_4:-61344135 | None:intergenic |
CGACGATCACCAAATGCGCC+AGG | 0.570480 | 5_4:-61348703 | None:intergenic |
GGTTCAAGACAATCTGGAGG+GGG | 0.571959 | 5_4:+61348469 | Msa0861860:CDS |
ACTTGCGAAGCAGGTTGAGA+AGG | 0.572880 | 5_4:+61345209 | Msa0861860:CDS |
GATATAGCGGTTGGTACACC+TGG | 0.573775 | 5_4:+61345324 | Msa0861860:CDS |
TTCAGTTTAATGCTAAACAT+GGG | 0.574341 | 5_4:+61344728 | Msa0861860:CDS |
GATGGAAGCACGATACAATA+CGG | 0.574693 | 5_4:-61348949 | None:intergenic |
ATTCCATGTGAGGCATTGCA+TGG | 0.576577 | 5_4:+61346305 | Msa0861860:CDS |
TGAATGATCTTATCCATGAT+GGG | 0.576602 | 5_4:-61344709 | None:intergenic |
AGAAGCGCGTCTGAGGATAG+TGG | 0.577060 | 5_4:-61344144 | None:intergenic |
GATACTATCTGTGTTTATGG+GGG | 0.577073 | 5_4:+61345258 | Msa0861860:CDS |
CTGGTTCAAGACAATCTGGA+GGG | 0.577308 | 5_4:+61348467 | Msa0861860:CDS |
CCCAACTTGAAGCATCTGAT+CGG | 0.577618 | 5_4:-61345418 | None:intergenic |
TTGATATGGCAGGCGAGGAA+AGG | 0.578026 | 5_4:+61345152 | Msa0861860:intron |
AGATCTGGTGGATCCTCTGG+TGG | 0.579065 | 5_4:+61348586 | Msa0861860:CDS |
TCGAAATCGAATAGCGATGA+GGG | 0.579604 | 5_4:+61344350 | Msa0861860:CDS |
ATAAAACTCTTAGAAAGCTG+TGG | 0.580225 | 5_4:+61349027 | Msa0861860:three_prime_UTR |
AGAAGATCAATAATTCGTCC+AGG | 0.580562 | 5_4:-61345342 | None:intergenic |
TCTGATCAGAAGCTGGCCGA+TGG | 0.581559 | 5_4:+61346023 | Msa0861860:CDS |
AGAGAATCTCGGCGGCGGCG+GGG | 0.583155 | 5_4:-61344190 | None:intergenic |
AGTTGGGTTCCAGGAAGATG+TGG | 0.583757 | 5_4:+61345434 | Msa0861860:CDS |
GATCGCTCTGGTGGATTCGG+TGG | 0.584846 | 5_4:+61348652 | Msa0861860:CDS |
CACGACCAGTTCGTCCAGAT+CGG | 0.587763 | 5_4:-61347634 | None:intergenic |
GGTGGTTCGGATCGCTCTGG+TGG | 0.588004 | 5_4:+61348643 | Msa0861860:CDS |
GGGTTGAAGAAGCGCGTCTG+AGG | 0.591518 | 5_4:-61344151 | None:intergenic |
ATGAGAGTTTGTCTCTCAGT+GGG | 0.594672 | 5_4:-61345477 | None:intergenic |
TCATCGCTATTCGATTTCGA+AGG | 0.595547 | 5_4:-61344347 | None:intergenic |
ATGCAAGGTCGTGATATGAT+TGG | 0.596643 | 5_4:+61344643 | Msa0861860:CDS |
ATTTGGTGATCGTCGTGGCA+GGG | 0.597318 | 5_4:+61348711 | Msa0861860:CDS |
GAAGAAGCGCGGAATAGTAA+GGG | 0.597324 | 5_4:-61344278 | None:intergenic |
GTGCTGGAACCTGCTATGCA+AGG | 0.597518 | 5_4:+61344628 | Msa0861860:CDS |
TCTGGTGGATTCAGCAAACA+AGG | 0.597677 | 5_4:+61348601 | Msa0861860:CDS |
TTCTCCAATACACAGTGATA+GGG | 0.599003 | 5_4:-61348873 | None:intergenic |
GCCCAGTGATGCAGTATCAA+CGG | 0.599175 | 5_4:-61348323 | None:intergenic |
CACCAACAAAAGAACCAGAT+CGG | 0.603698 | 5_4:-61348408 | None:intergenic |
AGGATCTTGCTGTGAGGTGA+CGG | 0.604296 | 5_4:-61344238 | None:intergenic |
GCCGTTGATACTGCATCACT+GGG | 0.604878 | 5_4:+61348322 | Msa0861860:CDS |
GAGGCTACAGTAATTCAGGC+GGG | 0.607727 | 5_4:+61348440 | Msa0861860:CDS |
GGAGAAGAGAATCTCGGCGG+CGG | 0.613460 | 5_4:-61344195 | None:intergenic |
TATGGTGTTGATATAGCGGT+TGG | 0.615411 | 5_4:+61345315 | Msa0861860:CDS |
TTCAAAACGAAAAGCTTCTG+CGG | 0.618866 | 5_4:-61344321 | None:intergenic |
GTTCAAGACAATCTGGAGGG+GGG | 0.621273 | 5_4:+61348470 | Msa0861860:CDS |
GGTGGTGGAGAAGAGAATCT+CGG | 0.623069 | 5_4:-61344201 | None:intergenic |
GGTGGCGGCAGATTTGGTGG+TGG | 0.628826 | 5_4:+61348355 | Msa0861860:CDS |
CGAGTACAGTGAAATTCCAT+CGG | 0.630256 | 5_4:-61346039 | None:intergenic |
GTAAGAAACACAAGTTCACT+CGG | 0.633542 | 5_4:+61348905 | Msa0861860:three_prime_UTR |
TGATTATGGTGTTGATATAG+CGG | 0.635851 | 5_4:+61345311 | Msa0861860:CDS |
GGAGGCTACAGTAATTCAGG+CGG | 0.636585 | 5_4:+61348439 | Msa0861860:CDS |
TTGTAGGAACATGCAAAAGG+AGG | 0.637081 | 5_4:+61346215 | Msa0861860:intron |
CCCCGATCTCTCAACAGATG+AGG | 0.638550 | 5_4:+61345283 | Msa0861860:CDS |
TCTGGTTCAAGACAATCTGG+AGG | 0.644868 | 5_4:+61348466 | Msa0861860:CDS |
TCACTGGGCGGATTTAGTGG+TGG | 0.646109 | 5_4:+61348337 | Msa0861860:CDS |
CCTCATCTGTTGAGAGATCG+GGG | 0.649386 | 5_4:-61345283 | None:intergenic |
TGAGAAGGAATTCTACGAGT+CGG | 0.649678 | 5_4:+61345224 | Msa0861860:CDS |
CTAAAACCATCAAGAAACGA+TGG | 0.649689 | 5_4:-61348783 | None:intergenic |
TATGGTGAAAATAGATATGG+CGG | 0.650568 | 5_4:+61348514 | Msa0861860:CDS |
CATGAGAGTTTGTCTCTCAG+TGG | 0.652328 | 5_4:-61345478 | None:intergenic |
TTCGAAATCGAATAGCGATG+AGG | 0.652697 | 5_4:+61344349 | Msa0861860:CDS |
GATTCAGGCAGTAGATCTGG+TGG | 0.657314 | 5_4:+61348574 | Msa0861860:CDS |
GAGGTGACGGAGCTCAGTGG+CGG | 0.663283 | 5_4:-61344225 | None:intergenic |
TTGTTTGCTGAATCCACCAG+AGG | 0.663460 | 5_4:-61348599 | None:intergenic |
TGCTTCGCAAGTTCTCTAGT+CGG | 0.663905 | 5_4:-61345198 | None:intergenic |
AATTACTGTAGCCTCCAGAA+CGG | 0.666725 | 5_4:-61348432 | None:intergenic |
CAACTGATGTTGCTTCACGT+GGG | 0.668416 | 5_4:+61346399 | Msa0861860:CDS |
TCGGCCACGAACCTACATGC+CGG | 0.670118 | 5_4:-61348848 | None:intergenic |
GGCGCCAAAACCAAAGCCAG+AGG | 0.670484 | 5_4:-61345177 | None:intergenic |
GACGCTGATCGAATATCACA+TGG | 0.675934 | 5_4:+61346269 | Msa0861860:CDS |
GCGCTTCTTCAACCCTCTCA+CGG | 0.678157 | 5_4:+61344159 | Msa0861860:CDS |
GGCGCATTTGGTGATCGTCG+TGG | 0.680089 | 5_4:+61348706 | Msa0861860:CDS |
GTTGATACTGCATCACTGGG+CGG | 0.682139 | 5_4:+61348325 | Msa0861860:CDS |
TGGTTCAAGACAATCTGGAG+GGG | 0.684246 | 5_4:+61348468 | Msa0861860:CDS |
TGTGAGGTGACGGAGCTCAG+TGG | 0.717055 | 5_4:-61344228 | None:intergenic |
GGTGGATTCAGCAAACAAGG+TGG | 0.720028 | 5_4:+61348604 | Msa0861860:CDS |
AAAACTCTTAGAAAGCTGTG+GGG | 0.775397 | 5_4:+61349029 | Msa0861860:three_prime_UTR |
GGTGGAGAAGAGAATCTCGG+CGG | 0.777683 | 5_4:-61344198 | None:intergenic |
AGTGAAAGGATCTTGCTGTG+AGG | 0.785087 | 5_4:-61344244 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAGATATTATTGATTAAT+TGG | + | chr5_4:61344758-61344777 | Msa0861860:intron | 10.0% |
!!! | TTAAAGTTTACATTTTTTTT+TGG | + | chr5_4:61345129-61345148 | Msa0861860:intron | 10.0% |
!!! | AAATTTTTGTATATGAATTT+AGG | + | chr5_4:61345877-61345896 | Msa0861860:intron | 10.0% |
!! | ATATATGGAATAAAATATAT+TGG | - | chr5_4:61346495-61346514 | None:intergenic | 10.0% |
!! | TTTATATCTGTATTAATATA+TGG | - | chr5_4:61346510-61346529 | None:intergenic | 10.0% |
!!! | AATATTTTTTTGTTATAACA+GGG | - | chr5_4:61346542-61346561 | None:intergenic | 10.0% |
!!! | AAATATTTTTTTGTTATAAC+AGG | - | chr5_4:61346543-61346562 | None:intergenic | 10.0% |
!!! | AACATTATTAGTTTTTTTTT+TGG | + | chr5_4:61347415-61347434 | Msa0861860:intron | 10.0% |
!! | TTAAAAAATAAATTAACAAC+TGG | - | chr5_4:61348237-61348256 | None:intergenic | 10.0% |
!!! | GTTGTTAATTTATTTTTTAA+TGG | + | chr5_4:61348237-61348256 | Msa0861860:intron | 10.0% |
!!! | AAATGAAGTTAAATTGTTTT+TGG | + | chr5_4:61344914-61344933 | Msa0861860:intron | 15.0% |
!!! | TATTTTCAACATTTTAATCA+TGG | - | chr5_4:61345680-61345699 | None:intergenic | 15.0% |
!!! | ACATGCATTAATTTTTTATT+TGG | + | chr5_4:61346924-61346943 | Msa0861860:intron | 15.0% |
!! | TTATTATTTAACTATCTCTA+TGG | + | chr5_4:61347103-61347122 | Msa0861860:intron | 15.0% |
!! | AAAATTAGATATTAGAATCT+TGG | + | chr5_4:61347272-61347291 | Msa0861860:intron | 15.0% |
!! | AATATAATATGAAAACAAGT+GGG | - | chr5_4:61347980-61347999 | None:intergenic | 15.0% |
!! | AATGATATAATAATAACTTG+AGG | - | chr5_4:61348174-61348193 | None:intergenic | 15.0% |
!! | GATATTTCATTAAGTTAAAA+TGG | - | chr5_4:61348754-61348773 | None:intergenic | 15.0% |
!!! | TAATTTGTTGAATTTTGTAG+AGG | + | chr5_4:61344602-61344621 | Msa0861860:intron | 20.0% |
!!! | AATTTGTTGAATTTTGTAGA+GGG | + | chr5_4:61344603-61344622 | Msa0861860:intron | 20.0% |
!!! | GTATAATCTATAAACTGTTT+TGG | + | chr5_4:61344936-61344955 | Msa0861860:intron | 20.0% |
!!! | ACATTTTTTTTTGGTTGATA+TGG | + | chr5_4:61345138-61345157 | Msa0861860:intron | 20.0% |
!! | ATTATTGATCTTCTTAATAG+AGG | + | chr5_4:61345351-61345370 | Msa0861860:CDS | 20.0% |
!! | AATGTTATAATATTCCATTG+TGG | - | chr5_4:61345735-61345754 | None:intergenic | 20.0% |
!! | AAATTAAGAGGATTATATGA+TGG | - | chr5_4:61346169-61346188 | None:intergenic | 20.0% |
!!! | TTTTTATAAAAGCATTGACA+AGG | + | chr5_4:61346636-61346655 | Msa0861860:intron | 20.0% |
!! | TCAAATCTAAGAGAAATATT+TGG | + | chr5_4:61346724-61346743 | Msa0861860:intron | 20.0% |
!! | GAGAAATATTTGGATTTAAA+TGG | + | chr5_4:61346734-61346753 | Msa0861860:intron | 20.0% |
!!! | AATTTTTTATTTGGAAGTTC+AGG | + | chr5_4:61346933-61346952 | Msa0861860:intron | 20.0% |
!! | GTAACTTATTACACTAATTT+AGG | - | chr5_4:61347484-61347503 | None:intergenic | 20.0% |
!! | ACAAATATCTCTGAATTATT+GGG | - | chr5_4:61347611-61347630 | None:intergenic | 20.0% |
!! | AACAAATATCTCTGAATTAT+TGG | - | chr5_4:61347612-61347631 | None:intergenic | 20.0% |
!! | CAGAAAAATAGTAATAAACA+AGG | - | chr5_4:61347813-61347832 | None:intergenic | 20.0% |
!!! | CTTGTTTATTACTATTTTTC+TGG | + | chr5_4:61347811-61347830 | Msa0861860:intron | 20.0% |
!! | AGAAATTAGACTACATTTAA+AGG | + | chr5_4:61347838-61347857 | Msa0861860:intron | 20.0% |
!! | GAAATTAGACTACATTTAAA+GGG | + | chr5_4:61347839-61347858 | Msa0861860:intron | 20.0% |
!! | GAATATAATATGAAAACAAG+TGG | - | chr5_4:61347981-61348000 | None:intergenic | 20.0% |
!!! | TTCTTTTTCTTTTTGATAGA+TGG | - | chr5_4:61348970-61348989 | None:intergenic | 20.0% |
!! | TCTATCAAAAAGAAAAAGAA+AGG | + | chr5_4:61348970-61348989 | Msa0861860:three_prime_UTR | 20.0% |
!! | CTATCAAAAAGAAAAAGAAA+GGG | + | chr5_4:61348971-61348990 | Msa0861860:three_prime_UTR | 20.0% |
! | ATTCAGTTTAATGCTAAACA+TGG | + | chr5_4:61344727-61344746 | Msa0861860:CDS | 25.0% |
! | TTCAGTTTAATGCTAAACAT+GGG | + | chr5_4:61344728-61344747 | Msa0861860:CDS | 25.0% |
! | TTTGAATTGAAGCTAGATAT+GGG | + | chr5_4:61344798-61344817 | Msa0861860:intron | 25.0% |
! | AAAGATACCAATTACACTAT+GGG | - | chr5_4:61345104-61345123 | None:intergenic | 25.0% |
! | TAAAGATACCAATTACACTA+TGG | - | chr5_4:61345105-61345124 | None:intergenic | 25.0% |
!!! | TTCAACATTTTAATCATGGT+AGG | - | chr5_4:61345676-61345695 | None:intergenic | 25.0% |
! | TATCACACTCGAAAAAATTT+GGG | + | chr5_4:61345811-61345830 | Msa0861860:intron | 25.0% |
! | TACATTGTCTTATCTTATGA+AGG | - | chr5_4:61345858-61345877 | None:intergenic | 25.0% |
!! | TATGGTCATTTAGAAGTATA+TGG | + | chr5_4:61345913-61345932 | Msa0861860:intron | 25.0% |
! | CTATTTAACTGTGAACTTAT+TGG | + | chr5_4:61345984-61346003 | Msa0861860:intron | 25.0% |
! | GAAGAGAAAACAAAATTAAG+AGG | - | chr5_4:61346181-61346200 | None:intergenic | 25.0% |
! | TTGCCACTAAAACATTAAAA+TGG | - | chr5_4:61346382-61346401 | None:intergenic | 25.0% |
! | AATGAACACTTCAAAACATT+AGG | - | chr5_4:61347014-61347033 | None:intergenic | 25.0% |
! | ATATTAGAATCTTGGATGTA+AGG | + | chr5_4:61347280-61347299 | Msa0861860:intron | 25.0% |
! | TATTAGAATCTTGGATGTAA+GGG | + | chr5_4:61347281-61347300 | Msa0861860:intron | 25.0% |
! | AAGTAATAAAGATTGACAGA+TGG | - | chr5_4:61347781-61347800 | None:intergenic | 25.0% |
! | CTGATAATCTAAATTTAGTC+TGG | + | chr5_4:61347930-61347949 | Msa0861860:intron | 25.0% |
! | TTGGTTGAAACTAAATTGAT+GGG | - | chr5_4:61348048-61348067 | None:intergenic | 25.0% |
!! | TTGTTTTCACAATTCTGTAT+AGG | - | chr5_4:61348136-61348155 | None:intergenic | 25.0% |
! | AACTGTTAAACGTGAATATT+TGG | - | chr5_4:61348292-61348311 | None:intergenic | 25.0% |
! | TCATATGGTGAAAATAGATA+TGG | + | chr5_4:61348511-61348530 | Msa0861860:CDS | 25.0% |
!! | AAAAGAAAAAGAAAGGGTTT+TGG | + | chr5_4:61348977-61348996 | Msa0861860:three_prime_UTR | 25.0% |
TAATAGGATTTGAGGGTTTA+GGG | - | chr5_4:61344069-61344088 | None:intergenic | 30.0% | |
AAATCCTATTACACTCGTTA+GGG | + | chr5_4:61344078-61344097 | Msa0861860:five_prime_UTR | 30.0% | |
GAATTGGTGAAAATCGAAAT+GGG | - | chr5_4:61344114-61344133 | None:intergenic | 30.0% | |
TGAATTGGTGAAAATCGAAA+TGG | - | chr5_4:61344115-61344134 | None:intergenic | 30.0% | |
TGAATGATCTTATCCATGAT+GGG | - | chr5_4:61344712-61344731 | None:intergenic | 30.0% | |
GTTTGAATTGAAGCTAGATA+TGG | + | chr5_4:61344797-61344816 | Msa0861860:intron | 30.0% | |
ATAAGCTCTTTATCCAAACA+GGG | - | chr5_4:61344824-61344843 | None:intergenic | 30.0% | |
AATAAGCTCTTTATCCAAAC+AGG | - | chr5_4:61344825-61344844 | None:intergenic | 30.0% | |
!! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr5_4:61345040-61345059 | None:intergenic | 30.0% |
!! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr5_4:61345041-61345060 | None:intergenic | 30.0% |
!!! | TTTTTTTTGGTTGATATGGC+AGG | + | chr5_4:61345142-61345161 | Msa0861860:intron | 30.0% |
ACACAGATAGTATCCAAATT+AGG | - | chr5_4:61345252-61345271 | None:intergenic | 30.0% | |
TTGGATACTATCTGTGTTTA+TGG | + | chr5_4:61345255-61345274 | Msa0861860:CDS | 30.0% | |
TGGATACTATCTGTGTTTAT+GGG | + | chr5_4:61345256-61345275 | Msa0861860:CDS | 30.0% | |
!! | TGATTATGGTGTTGATATAG+CGG | + | chr5_4:61345311-61345330 | Msa0861860:CDS | 30.0% |
AGCAAAACTTACAAGATCAA+TGG | - | chr5_4:61345568-61345587 | None:intergenic | 30.0% | |
! | GATAATGCCTTTAAGTATTG+AGG | + | chr5_4:61345607-61345626 | Msa0861860:intron | 30.0% |
TGCATATCCTCAATACTTAA+AGG | - | chr5_4:61345617-61345636 | None:intergenic | 30.0% | |
!! | AACATTTTAATCATGGTAGG+AGG | - | chr5_4:61345673-61345692 | None:intergenic | 30.0% |
ACCTATTAATTGTCGTAGTA+AGG | + | chr5_4:61345701-61345720 | Msa0861860:intron | 30.0% | |
GTATCACACTCGAAAAAATT+TGG | + | chr5_4:61345810-61345829 | Msa0861860:intron | 30.0% | |
! | AGAAGGCATACTTTAATTAG+AGG | - | chr5_4:61346104-61346123 | None:intergenic | 30.0% |
TCGAAAAATAATCCTCTTGT+AGG | + | chr5_4:61346199-61346218 | Msa0861860:intron | 30.0% | |
!! | TGGCCATTTTAATGTTTTAG+TGG | + | chr5_4:61346376-61346395 | Msa0861860:CDS | 30.0% |
AAAATATTTAGTCCCGTCTT+AGG | + | chr5_4:61346554-61346573 | Msa0861860:intron | 30.0% | |
!! | TTATAAAAGCATTGACAAGG+AGG | + | chr5_4:61346639-61346658 | Msa0861860:intron | 30.0% |
!! | TATAAAAGCATTGACAAGGA+GGG | + | chr5_4:61346640-61346659 | Msa0861860:intron | 30.0% |
! | ATTTGAACTGAGATTTTCCT+TGG | - | chr5_4:61346710-61346729 | None:intergenic | 30.0% |
!!! | CATTTTGTTATTGTGTGAAC+TGG | + | chr5_4:61346885-61346904 | Msa0861860:intron | 30.0% |
ATTTAACTATCTCTATGGCA+CGG | + | chr5_4:61347108-61347127 | Msa0861860:intron | 30.0% | |
ATTAGAATCTTGGATGTAAG+GGG | + | chr5_4:61347282-61347301 | Msa0861860:intron | 30.0% | |
GTGTGTTCTTGTATCTTAAT+GGG | + | chr5_4:61347365-61347384 | Msa0861860:intron | 30.0% | |
!! | GTTCATGGTTCTATACATTT+TGG | + | chr5_4:61347392-61347411 | Msa0861860:intron | 30.0% |
! | GTTATTCTTTTGTATGCATC+TGG | + | chr5_4:61347439-61347458 | Msa0861860:intron | 30.0% |
!!! | TTGAGCTTTTTTCCTCATAT+AGG | + | chr5_4:61347568-61347587 | Msa0861860:intron | 30.0% |
CATAATGAATCACCTATATG+AGG | - | chr5_4:61347583-61347602 | None:intergenic | 30.0% | |
TTTATACACAAGATCAATCC+AGG | + | chr5_4:61347684-61347703 | Msa0861860:CDS | 30.0% | |
ATGGAAATGGATAATATGCA+GGG | - | chr5_4:61347762-61347781 | None:intergenic | 30.0% | |
TAAAGATTGACAGATGGAAA+TGG | - | chr5_4:61347775-61347794 | None:intergenic | 30.0% | |
!! | ATCAGTAACTTGAGTTTTGT+CGG | - | chr5_4:61347915-61347934 | None:intergenic | 30.0% |
TGCTAGAATGAAATTACATG+TGG | + | chr5_4:61348020-61348039 | Msa0861860:intron | 30.0% | |
GTTGGTTGAAACTAAATTGA+TGG | - | chr5_4:61348049-61348068 | None:intergenic | 30.0% | |
TATGGTGAAAATAGATATGG+CGG | + | chr5_4:61348514-61348533 | Msa0861860:CDS | 30.0% | |
!! | TCATTTCCTCTAAAGTTTAC+CGG | + | chr5_4:61348829-61348848 | Msa0861860:three_prime_UTR | 30.0% |
ATAAAACTCTTAGAAAGCTG+TGG | + | chr5_4:61349027-61349046 | Msa0861860:three_prime_UTR | 30.0% | |
TAAAACTCTTAGAAAGCTGT+GGG | + | chr5_4:61349028-61349047 | Msa0861860:three_prime_UTR | 30.0% | |
GTAATAGGATTTGAGGGTTT+AGG | - | chr5_4:61344070-61344089 | None:intergenic | 35.0% | |
ACGAGTGTAATAGGATTTGA+GGG | - | chr5_4:61344076-61344095 | None:intergenic | 35.0% | |
AACGAGTGTAATAGGATTTG+AGG | - | chr5_4:61344077-61344096 | None:intergenic | 35.0% | |
CAAATCCTATTACACTCGTT+AGG | + | chr5_4:61344077-61344096 | Msa0861860:five_prime_UTR | 35.0% | |
AAAACCCTAACGAGTGTAAT+AGG | - | chr5_4:61344085-61344104 | None:intergenic | 35.0% | |
TAGTGGTAATCATGGTGAAT+TGG | - | chr5_4:61344130-61344149 | None:intergenic | 35.0% | |
TTCAAAACGAAAAGCTTCTG+CGG | - | chr5_4:61344324-61344343 | None:intergenic | 35.0% | |
TATTGAACGCAAACCTGAAT+GGG | - | chr5_4:61344452-61344471 | None:intergenic | 35.0% | |
TTATTGAACGCAAACCTGAA+TGG | - | chr5_4:61344453-61344472 | None:intergenic | 35.0% | |
! | ATTCAGGTTTGCGTTCAATA+AGG | + | chr5_4:61344452-61344471 | Msa0861860:intron | 35.0% |
! | TTCAGGTTTGCGTTCAATAA+GGG | + | chr5_4:61344453-61344472 | Msa0861860:intron | 35.0% |
! | ACTGGAAAAACTCTTGCTTT+TGG | + | chr5_4:61344682-61344701 | Msa0861860:CDS | 35.0% |
!! | CTGGAAAAACTCTTGCTTTT+GGG | + | chr5_4:61344683-61344702 | Msa0861860:CDS | 35.0% |
CTGAATGATCTTATCCATGA+TGG | - | chr5_4:61344713-61344732 | None:intergenic | 35.0% | |
AGTCTCACAAAACTTATGCT+AGG | + | chr5_4:61345044-61345063 | Msa0861860:intron | 35.0% | |
TCAAATAAGTCGATCCAAAC+AGG | + | chr5_4:61345078-61345097 | Msa0861860:intron | 35.0% | |
GGATACTATCTGTGTTTATG+GGG | + | chr5_4:61345257-61345276 | Msa0861860:CDS | 35.0% | |
GATACTATCTGTGTTTATGG+GGG | + | chr5_4:61345258-61345277 | Msa0861860:CDS | 35.0% | |
AGAAGATCAATAATTCGTCC+AGG | - | chr5_4:61345345-61345364 | None:intergenic | 35.0% | |
CTTCGTCAAGAATAACAAAC+TGG | - | chr5_4:61345398-61345417 | None:intergenic | 35.0% | |
GTTAACTGCTTTATCCAAGT+TGG | - | chr5_4:61345519-61345538 | None:intergenic | 35.0% | |
! | CAATGGTTAGAGGATTTTTC+AGG | - | chr5_4:61345551-61345570 | None:intergenic | 35.0% |
CTTACAAGATCAATGGTTAG+AGG | - | chr5_4:61345561-61345580 | None:intergenic | 35.0% | |
!!! | TGCTGTTCTATTTTTGTGAC+TGG | + | chr5_4:61345584-61345603 | Msa0861860:intron | 35.0% |
!!! | GCTGTTCTATTTTTGTGACT+GGG | + | chr5_4:61345585-61345604 | Msa0861860:intron | 35.0% |
GCCTTACTACGACAATTAAT+AGG | - | chr5_4:61345705-61345724 | None:intergenic | 35.0% | |
ATGAATTTAGGAAGCCGTTA+TGG | + | chr5_4:61345889-61345908 | Msa0861860:intron | 35.0% | |
CTAAATGACCATAGCCATAA+CGG | - | chr5_4:61345906-61345925 | None:intergenic | 35.0% | |
! | AGATCAACAGTCAGTCATTT+TGG | + | chr5_4:61345950-61345969 | Msa0861860:intron | 35.0% |
!! | GTCAAAAAGTATTCCATGTG+AGG | + | chr5_4:61346295-61346314 | Msa0861860:CDS | 35.0% |
GAACTCACAAGATCAACATT+AGG | - | chr5_4:61346434-61346453 | None:intergenic | 35.0% | |
TAACTTTACGATGTCAATGG+CGG | - | chr5_4:61346471-61346490 | None:intergenic | 35.0% | |
GGATAACTTTACGATGTCAA+TGG | - | chr5_4:61346474-61346493 | None:intergenic | 35.0% | |
! | GAGAATAGTCTTACCGTTAT+AGG | + | chr5_4:61346674-61346693 | Msa0861860:intron | 35.0% |
! | AATAGTCTTACCGTTATAGG+TGG | + | chr5_4:61346677-61346696 | Msa0861860:intron | 35.0% |
TTATGTTCTCTCCTACTTTC+TGG | + | chr5_4:61346841-61346860 | Msa0861860:intron | 35.0% | |
TAACAGACTATCCAGAAAGT+AGG | - | chr5_4:61346855-61346874 | None:intergenic | 35.0% | |
GAACACTTCAAAACATTAGG+AGG | - | chr5_4:61347011-61347030 | None:intergenic | 35.0% | |
TACATCTGCAAGGGAAATAT+TGG | + | chr5_4:61347214-61347233 | Msa0861860:intron | 35.0% | |
TGCAAGGGAAATATTGGAAT+TGG | + | chr5_4:61347220-61347239 | Msa0861860:intron | 35.0% | |
GGTGTGTTCTTGTATCTTAA+TGG | + | chr5_4:61347364-61347383 | Msa0861860:intron | 35.0% | |
!! | ATCTTAATGGGTTCTGTTCA+TGG | + | chr5_4:61347377-61347396 | Msa0861860:intron | 35.0% |
! | TGTAGGCTGTAAATTTTCAG+AGG | + | chr5_4:61347730-61347749 | Msa0861860:CDS | 35.0% |
GATGGAAATGGATAATATGC+AGG | - | chr5_4:61347763-61347782 | None:intergenic | 35.0% | |
GTGAAAAACACAACTCTTGT+TGG | - | chr5_4:61348067-61348086 | None:intergenic | 35.0% | |
!!! | TTTTCTGGTTCAAGACAATC+TGG | + | chr5_4:61348463-61348482 | Msa0861860:CDS | 35.0% |
ATATCACCATCGTTTCTTGA+TGG | + | chr5_4:61348777-61348796 | Msa0861860:three_prime_UTR | 35.0% | |
CTAAAACCATCAAGAAACGA+TGG | - | chr5_4:61348786-61348805 | None:intergenic | 35.0% | |
AATACACAGTGATAGGGATT+CGG | - | chr5_4:61348870-61348889 | None:intergenic | 35.0% | |
TTCTCCAATACACAGTGATA+GGG | - | chr5_4:61348876-61348895 | None:intergenic | 35.0% | |
GTAAGAAACACAAGTTCACT+CGG | + | chr5_4:61348905-61348924 | Msa0861860:three_prime_UTR | 35.0% | |
!! | AGAAAAAGAAAGGGTTTTGG+AGG | + | chr5_4:61348980-61348999 | Msa0861860:three_prime_UTR | 35.0% |
! | AGGCAAGCTTTATCAAGAAA+TGG | + | chr5_4:61349000-61349019 | Msa0861860:three_prime_UTR | 35.0% |
! | GGCAAGCTTTATCAAGAAAT+GGG | + | chr5_4:61349001-61349020 | Msa0861860:three_prime_UTR | 35.0% |
AAAACTCTTAGAAAGCTGTG+GGG | + | chr5_4:61349029-61349048 | Msa0861860:three_prime_UTR | 35.0% | |
GGTGAAAATCGAAATGGGAA+TGG | - | chr5_4:61344109-61344128 | None:intergenic | 40.0% | |
! | TCTGAGGATAGTGGTAATCA+TGG | - | chr5_4:61344138-61344157 | None:intergenic | 40.0% |
! | GGGTTGTGATTTAGAGTGAA+AGG | - | chr5_4:61344261-61344280 | None:intergenic | 40.0% |
TCATCGCTATTCGATTTCGA+AGG | - | chr5_4:61344350-61344369 | None:intergenic | 40.0% | |
TTCGAAATCGAATAGCGATG+AGG | + | chr5_4:61344349-61344368 | Msa0861860:CDS | 40.0% | |
TCGAAATCGAATAGCGATGA+GGG | + | chr5_4:61344350-61344369 | Msa0861860:CDS | 40.0% | |
AACCTGAATGGGAAAAAGCT+TGG | - | chr5_4:61344441-61344460 | None:intergenic | 40.0% | |
ATGCAAGGTCGTGATATGAT+TGG | + | chr5_4:61344643-61344662 | Msa0861860:CDS | 40.0% | |
AATTACACTATGGGCCTGTT+TGG | - | chr5_4:61345095-61345114 | None:intergenic | 40.0% | |
AAACAGGCCCATAGTGTAAT+TGG | + | chr5_4:61345094-61345113 | Msa0861860:intron | 40.0% | |
TGAGAAGGAATTCTACGAGT+CGG | + | chr5_4:61345224-61345243 | Msa0861860:CDS | 40.0% | |
!! | TATGGTGTTGATATAGCGGT+TGG | + | chr5_4:61345315-61345334 | Msa0861860:CDS | 40.0% |
ATATCTTCTCCACATCTTCC+TGG | - | chr5_4:61345446-61345465 | None:intergenic | 40.0% | |
GGAAGATGTGGAGAAGATAT+TGG | + | chr5_4:61345446-61345465 | Msa0861860:CDS | 40.0% | |
ATGAGAGTTTGTCTCTCAGT+GGG | - | chr5_4:61345480-61345499 | None:intergenic | 40.0% | |
CTGTGAACTTATTGGTACCT+AGG | + | chr5_4:61345992-61346011 | Msa0861860:intron | 40.0% | |
GAACTTATTGGTACCTAGGT+TGG | + | chr5_4:61345996-61346015 | Msa0861860:intron | 40.0% | |
CGAGTACAGTGAAATTCCAT+CGG | - | chr5_4:61346042-61346061 | None:intergenic | 40.0% | |
GTTGAAACTAGCACAAGTCA+AGG | - | chr5_4:61346139-61346158 | None:intergenic | 40.0% | |
! | CTTTTGCATGTTCCTACAAG+AGG | - | chr5_4:61346214-61346233 | None:intergenic | 40.0% |
CTCTTGTAGGAACATGCAAA+AGG | + | chr5_4:61346212-61346231 | Msa0861860:intron | 40.0% | |
TTGTAGGAACATGCAAAAGG+AGG | + | chr5_4:61346215-61346234 | Msa0861860:intron | 40.0% | |
!!! | ATCAGCGTCACGTTTTGTTT+GGG | - | chr5_4:61346258-61346277 | None:intergenic | 40.0% |
TATCACAAGTCCAGAGAGAA+AGG | + | chr5_4:61346333-61346352 | Msa0861860:CDS | 40.0% | |
! | AATGGCGGGAAAAAGGTAAA+AGG | - | chr5_4:61346456-61346475 | None:intergenic | 40.0% |
AACTTTACGATGTCAATGGC+GGG | - | chr5_4:61346470-61346489 | None:intergenic | 40.0% | |
ATATTTAGTCCCGTCTTAGG+TGG | + | chr5_4:61346557-61346576 | Msa0861860:intron | 40.0% | |
TATTTAGTCCCGTCTTAGGT+GGG | + | chr5_4:61346558-61346577 | Msa0861860:intron | 40.0% | |
TATGTATCACCCACCTAAGA+CGG | - | chr5_4:61346570-61346589 | None:intergenic | 40.0% | |
! | AATGTTATGCGAAAGCGCAT+TGG | + | chr5_4:61346784-61346803 | Msa0861860:intron | 40.0% |
TTGGAAGTTCAGGTCAAGTA+TGG | + | chr5_4:61346943-61346962 | Msa0861860:intron | 40.0% | |
TATGCTGTCTGAGCTTCAAA+TGG | + | chr5_4:61347163-61347182 | Msa0861860:intron | 40.0% | |
ATGCTGTCTGAGCTTCAAAT+GGG | + | chr5_4:61347164-61347183 | Msa0861860:intron | 40.0% | |
CTCAACTCTTACATCTGCAA+GGG | + | chr5_4:61347205-61347224 | Msa0861860:intron | 40.0% | |
TGGATGTAAGGGGTAATGAT+AGG | + | chr5_4:61347292-61347311 | Msa0861860:intron | 40.0% | |
GACATGCATCATGAATGATC+TGG | + | chr5_4:61347325-61347344 | Msa0861860:intron | 40.0% | |
! | TCTGGAAGTCTTGTGTGTTT+AGG | + | chr5_4:61347343-61347362 | Msa0861860:intron | 40.0% |
GAGATATTTGTTCACCGATC+TGG | + | chr5_4:61347620-61347639 | Msa0861860:CDS | 40.0% | |
AAGATCAATCCAGGACTCTT+AGG | + | chr5_4:61347693-61347712 | Msa0861860:CDS | 40.0% | |
!! | ACTTGAGTTTTGTCGGTACT+TGG | - | chr5_4:61347908-61347927 | None:intergenic | 40.0% |
! | GCAGTATCAACGGCAATTTT+TGG | - | chr5_4:61348316-61348335 | None:intergenic | 40.0% |
CACCAACAAAAGAACCAGAT+CGG | - | chr5_4:61348411-61348430 | None:intergenic | 40.0% | |
AATTACTGTAGCCTCCAGAA+CGG | - | chr5_4:61348435-61348454 | None:intergenic | 40.0% | |
! | TTCAGCAAACAAGGTGGTTT+TGG | + | chr5_4:61348610-61348629 | Msa0861860:CDS | 40.0% |
!!! | GTGGTGGTTTTGGAGATTTT+CGG | + | chr5_4:61348671-61348690 | Msa0861860:CDS | 40.0% |
!!! | TGGTTTTGGAGATTTTCGGT+CGG | + | chr5_4:61348675-61348694 | Msa0861860:CDS | 40.0% |
TACATGCCGGTAAACTTTAG+AGG | - | chr5_4:61348838-61348857 | None:intergenic | 40.0% | |
! | TCTAAAGTTTACCGGCATGT+AGG | + | chr5_4:61348837-61348856 | Msa0861860:three_prime_UTR | 40.0% |
GAATCCCTATCACTGTGTAT+TGG | + | chr5_4:61348869-61348888 | Msa0861860:three_prime_UTR | 40.0% | |
CTTCTCCAATACACAGTGAT+AGG | - | chr5_4:61348877-61348896 | None:intergenic | 40.0% | |
CTATCACTGTGTATTGGAGA+AGG | + | chr5_4:61348875-61348894 | Msa0861860:three_prime_UTR | 40.0% | |
GGCAGAAGCTGAACAAAAAA+TGG | - | chr5_4:61348931-61348950 | None:intergenic | 40.0% | |
! | GATGGAAGCACGATACAATA+CGG | - | chr5_4:61348952-61348971 | None:intergenic | 40.0% |
! | AGTGAAAGGATCTTGCTGTG+AGG | - | chr5_4:61344247-61344266 | None:intergenic | 45.0% |
! | GAAGAAGCGCGGAATAGTAA+GGG | - | chr5_4:61344281-61344300 | None:intergenic | 45.0% |
! | AGAAGAAGCGCGGAATAGTA+AGG | - | chr5_4:61344282-61344301 | None:intergenic | 45.0% |
TCAGGATATTGTCGCTGCTT+TGG | + | chr5_4:61344400-61344419 | Msa0861860:CDS | 45.0% | |
!! | CACCAAGCTTTTTCCCATTC+AGG | + | chr5_4:61344436-61344455 | Msa0861860:CDS | 45.0% |
! | AATTTTGTAGAGGGCTGTGC+TGG | + | chr5_4:61344612-61344631 | Msa0861860:intron | 45.0% |
ATATCACGACCTTGCATAGC+AGG | - | chr5_4:61344640-61344659 | None:intergenic | 45.0% | |
! | ATGATTGGTCGAGCAAGAAC+AGG | + | chr5_4:61344658-61344677 | Msa0861860:CDS | 45.0% |
!!! | TGCTTTTGGGATACCCATCA+TGG | + | chr5_4:61344696-61344715 | Msa0861860:CDS | 45.0% |
TGCTTCGCAAGTTCTCTAGT+CGG | - | chr5_4:61345201-61345220 | None:intergenic | 45.0% | |
TGCCTCATCTGTTGAGAGAT+CGG | - | chr5_4:61345288-61345307 | None:intergenic | 45.0% | |
CAGATGAGGCAGCTTGATTA+TGG | + | chr5_4:61345297-61345316 | Msa0861860:CDS | 45.0% | |
! | CCCAACTTGAAGCATCTGAT+CGG | - | chr5_4:61345421-61345440 | None:intergenic | 45.0% |
! | CCGATCAGATGCTTCAAGTT+GGG | + | chr5_4:61345418-61345437 | Msa0861860:CDS | 45.0% |
CATGAGAGTTTGTCTCTCAG+TGG | - | chr5_4:61345481-61345500 | None:intergenic | 45.0% | |
TCTCTGCAACAATGCCAACT+TGG | + | chr5_4:61345502-61345521 | Msa0861860:CDS | 45.0% | |
GTAAGGCACATGAACCACAA+TGG | + | chr5_4:61345718-61345737 | Msa0861860:intron | 45.0% | |
GACAGACACAGTCATTGCAT+TGG | - | chr5_4:61345787-61345806 | None:intergenic | 45.0% | |
TTAGGAAGCCGTTATGGCTA+TGG | + | chr5_4:61345895-61345914 | Msa0861860:intron | 45.0% | |
CTGATCAGAATCTCCAACCT+AGG | - | chr5_4:61346012-61346031 | None:intergenic | 45.0% | |
TGGAGATTCTGATCAGAAGC+TGG | + | chr5_4:61346016-61346035 | Msa0861860:CDS | 45.0% | |
TCTGATGCGTATGTCAAAGC+AGG | + | chr5_4:61346068-61346087 | Msa0861860:CDS | 45.0% | |
CAAGGAACGATGGTATCAGA+AGG | - | chr5_4:61346121-61346140 | None:intergenic | 45.0% | |
TAGCACAAGTCAAGGAACGA+TGG | - | chr5_4:61346131-61346150 | None:intergenic | 45.0% | |
!! | GATCAGCGTCACGTTTTGTT+TGG | - | chr5_4:61346259-61346278 | None:intergenic | 45.0% |
GACGCTGATCGAATATCACA+TGG | + | chr5_4:61346269-61346288 | Msa0861860:CDS | 45.0% | |
!! | ATTCCATGTGAGGCATTGCA+TGG | + | chr5_4:61346305-61346324 | Msa0861860:CDS | 45.0% |
!! | ACACTTGCTGGCTTCAGAAA+TGG | + | chr5_4:61346356-61346375 | Msa0861860:CDS | 45.0% |
! | CAACTGATGTTGCTTCACGT+GGG | + | chr5_4:61346399-61346418 | Msa0861860:CDS | 45.0% |
ATGTATCACCCACCTAAGAC+GGG | - | chr5_4:61346569-61346588 | None:intergenic | 45.0% | |
AGTCTTACCGTTATAGGTGG+AGG | + | chr5_4:61346680-61346699 | Msa0861860:intron | 45.0% | |
GTCTTACCGTTATAGGTGGA+GGG | + | chr5_4:61346681-61346700 | Msa0861860:intron | 45.0% | |
TGGTTTCCCTCCACCTATAA+CGG | - | chr5_4:61346690-61346709 | None:intergenic | 45.0% | |
TTATAGGTGGAGGGAAACCA+AGG | + | chr5_4:61346690-61346709 | Msa0861860:intron | 45.0% | |
GCTCAACTCTTACATCTGCA+AGG | + | chr5_4:61347204-61347223 | Msa0861860:intron | 45.0% | |
CTCAATAGTCCTAAGAGTCC+TGG | - | chr5_4:61347705-61347724 | None:intergenic | 45.0% | |
AAGCTGGGAATTAAAGCAGG+AGG | - | chr5_4:61347873-61347892 | None:intergenic | 45.0% | |
GTCAAGCTGGGAATTAAAGC+AGG | - | chr5_4:61347876-61347895 | None:intergenic | 45.0% | |
TGGTGTTTCACAGTCAAGCT+GGG | - | chr5_4:61347888-61347907 | None:intergenic | 45.0% | |
! | TTGGTGTTTCACAGTCAAGC+TGG | - | chr5_4:61347889-61347908 | None:intergenic | 45.0% |
! | GGGCACTTTTGTAAGACTTG+AGG | - | chr5_4:61347960-61347979 | None:intergenic | 45.0% |
!!! | CGATCTGGTTCTTTTGTTGG+TGG | + | chr5_4:61348409-61348428 | Msa0861860:CDS | 45.0% |
TCTGGAGGCTACAGTAATTC+AGG | + | chr5_4:61348436-61348455 | Msa0861860:CDS | 45.0% | |
!! | AGTAATTCAGGCGGGTTTTC+TGG | + | chr5_4:61348448-61348467 | Msa0861860:CDS | 45.0% |
! | TCTGGTTCAAGACAATCTGG+AGG | + | chr5_4:61348466-61348485 | Msa0861860:CDS | 45.0% |
CTGGTTCAAGACAATCTGGA+GGG | + | chr5_4:61348467-61348486 | Msa0861860:CDS | 45.0% | |
TGGTTCAAGACAATCTGGAG+GGG | + | chr5_4:61348468-61348487 | Msa0861860:CDS | 45.0% | |
! | TCTGGTGGATCAAGCTCATA+TGG | + | chr5_4:61348496-61348515 | Msa0861860:CDS | 45.0% |
AGATCTACTGCCTGAATCAC+CGG | - | chr5_4:61348572-61348591 | None:intergenic | 45.0% | |
! | TTGTTTGCTGAATCCACCAG+AGG | - | chr5_4:61348602-61348621 | None:intergenic | 45.0% |
!! | TCTGGTGGATTCAGCAAACA+AGG | + | chr5_4:61348601-61348620 | Msa0861860:CDS | 45.0% |
!!! | AGCAAACAAGGTGGTTTTGG+TGG | + | chr5_4:61348613-61348632 | Msa0861860:CDS | 45.0% |
!!! | CAAGGTGGTTTTGGTGGATT+CGG | + | chr5_4:61348619-61348638 | Msa0861860:CDS | 45.0% |
!!! | GGTTTTGGAGATTTTCGGTC+GGG | + | chr5_4:61348676-61348695 | Msa0861860:CDS | 45.0% |
!! | GGTGGTGGAGAAGAGAATCT+CGG | - | chr5_4:61344204-61344223 | None:intergenic | 50.0% |
! | AGGATCTTGCTGTGAGGTGA+CGG | - | chr5_4:61344241-61344260 | None:intergenic | 50.0% |
GTCTTGAGATCGCGAAGCTT+GGG | + | chr5_4:61344372-61344391 | Msa0861860:CDS | 50.0% | |
!! | GTCGCTGCTTTGGAGAAGAA+AGG | + | chr5_4:61344410-61344429 | Msa0861860:CDS | 50.0% |
AGCTAGATATGGGCCCTGTT+TGG | + | chr5_4:61344808-61344827 | Msa0861860:intron | 50.0% | |
! | TTTGGTTGATATGGCAGGCG+AGG | + | chr5_4:61345147-61345166 | Msa0861860:intron | 50.0% |
TTGATATGGCAGGCGAGGAA+AGG | + | chr5_4:61345152-61345171 | Msa0861860:intron | 50.0% | |
! | AGGAAAGGATCCTCTGGCTT+TGG | + | chr5_4:61345167-61345186 | Msa0861860:CDS | 50.0% |
!!! | GGATCCTCTGGCTTTGGTTT+TGG | + | chr5_4:61345173-61345192 | Msa0861860:CDS | 50.0% |
GACTAGAGAACTTGCGAAGC+AGG | + | chr5_4:61345200-61345219 | Msa0861860:CDS | 50.0% | |
! | ACTTGCGAAGCAGGTTGAGA+AGG | + | chr5_4:61345209-61345228 | Msa0861860:CDS | 50.0% |
CCTCATCTGTTGAGAGATCG+GGG | - | chr5_4:61345286-61345305 | None:intergenic | 50.0% | |
GCCTCATCTGTTGAGAGATC+GGG | - | chr5_4:61345287-61345306 | None:intergenic | 50.0% | |
! | GATATAGCGGTTGGTACACC+TGG | + | chr5_4:61345324-61345343 | Msa0861860:CDS | 50.0% |
GCCGATCAGATGCTTCAAGT+TGG | + | chr5_4:61345417-61345436 | Msa0861860:CDS | 50.0% | |
!! | GATGCTTCAAGTTGGGTTCC+AGG | + | chr5_4:61345425-61345444 | Msa0861860:CDS | 50.0% |
AGTTGGGTTCCAGGAAGATG+TGG | + | chr5_4:61345434-61345453 | Msa0861860:CDS | 50.0% | |
TCTCCATGCAATGCCTCACA+TGG | - | chr5_4:61346311-61346330 | None:intergenic | 50.0% | |
CAGCAAGTGTCCTTTCTCTC+TGG | - | chr5_4:61346346-61346365 | None:intergenic | 50.0% | |
CAGAGAGAAAGGACACTTGC+TGG | + | chr5_4:61346344-61346363 | Msa0861860:CDS | 50.0% | |
! | GCAACTGATGTTGCTTCACG+TGG | + | chr5_4:61346398-61346417 | Msa0861860:CDS | 50.0% |
! | CGATGTCAATGGCGGGAAAA+AGG | - | chr5_4:61346463-61346482 | None:intergenic | 50.0% |
AAATGGCCTGTCACTAGACG+TGG | + | chr5_4:61346751-61346770 | Msa0861860:intron | 50.0% | |
CATCAACCACGTCTAGTGAC+AGG | - | chr5_4:61346760-61346779 | None:intergenic | 50.0% | |
! | ACTGGTCGTGCTGGTAAGAA+AGG | + | chr5_4:61347647-61347666 | Msa0861860:CDS | 50.0% |
AGGACTATTGAGCGCGATGT+AGG | + | chr5_4:61347713-61347732 | Msa0861860:CDS | 50.0% | |
TGCCGTTGATACTGCATCAC+TGG | + | chr5_4:61348321-61348340 | Msa0861860:CDS | 50.0% | |
GCCGTTGATACTGCATCACT+GGG | + | chr5_4:61348322-61348341 | Msa0861860:CDS | 50.0% | |
GCCCAGTGATGCAGTATCAA+CGG | - | chr5_4:61348326-61348345 | None:intergenic | 50.0% | |
GTTGATACTGCATCACTGGG+CGG | + | chr5_4:61348325-61348344 | Msa0861860:CDS | 50.0% | |
!! | TTTAGTGGTGGCGGCAGATT+TGG | + | chr5_4:61348349-61348368 | Msa0861860:CDS | 50.0% |
!!! | GGCCGATCTGGTTCTTTTGT+TGG | + | chr5_4:61348406-61348425 | Msa0861860:CDS | 50.0% |
!!! | TCTTTTGTTGGTGGCCGTTC+TGG | + | chr5_4:61348418-61348437 | Msa0861860:CDS | 50.0% |
GGAGGCTACAGTAATTCAGG+CGG | + | chr5_4:61348439-61348458 | Msa0861860:CDS | 50.0% | |
GAGGCTACAGTAATTCAGGC+GGG | + | chr5_4:61348440-61348459 | Msa0861860:CDS | 50.0% | |
GGTTCAAGACAATCTGGAGG+GGG | + | chr5_4:61348469-61348488 | Msa0861860:CDS | 50.0% | |
GTTCAAGACAATCTGGAGGG+GGG | + | chr5_4:61348470-61348489 | Msa0861860:CDS | 50.0% | |
!! | AGATATGGCGGATCAAGCTC+TGG | + | chr5_4:61348526-61348545 | Msa0861860:CDS | 50.0% |
! | GGATCAAGCTCTGGTCGTTT+CGG | + | chr5_4:61348535-61348554 | Msa0861860:CDS | 50.0% |
GGTGATTCAGGCAGTAGATC+TGG | + | chr5_4:61348571-61348590 | Msa0861860:CDS | 50.0% | |
GATTCAGGCAGTAGATCTGG+TGG | + | chr5_4:61348574-61348593 | Msa0861860:CDS | 50.0% | |
! | AGTAGATCTGGTGGATCCTC+TGG | + | chr5_4:61348583-61348602 | Msa0861860:CDS | 50.0% |
! | GGTGGATTCAGCAAACAAGG+TGG | + | chr5_4:61348604-61348623 | Msa0861860:CDS | 50.0% |
! | GATTTTCGGTCGGGTAAACC+TGG | + | chr5_4:61348685-61348704 | Msa0861860:CDS | 50.0% |
! | ATTTGGTGATCGTCGTGGCA+GGG | + | chr5_4:61348711-61348730 | Msa0861860:CDS | 50.0% |
TTTACCGGCATGTAGGTTCG+TGG | + | chr5_4:61348844-61348863 | Msa0861860:three_prime_UTR | 50.0% | |
! | AGAAGCGCGTCTGAGGATAG+TGG | - | chr5_4:61344147-61344166 | None:intergenic | 55.0% |
GCGCTTCTTCAACCCTCTCA+CGG | + | chr5_4:61344159-61344178 | Msa0861860:CDS | 55.0% | |
GGTGGAGAAGAGAATCTCGG+CGG | - | chr5_4:61344201-61344220 | None:intergenic | 55.0% | |
GGTCTTGAGATCGCGAAGCT+TGG | + | chr5_4:61344371-61344390 | Msa0861860:CDS | 55.0% | |
CGCGAAGCTTGGGATTTCTC+AGG | + | chr5_4:61344382-61344401 | Msa0861860:CDS | 55.0% | |
GTGCTGGAACCTGCTATGCA+AGG | + | chr5_4:61344628-61344647 | Msa0861860:CDS | 55.0% | |
GGTCGAGCAAGAACAGGAAC+TGG | + | chr5_4:61344664-61344683 | Msa0861860:CDS | 55.0% | |
CTACGAGTCGGCGCCTAATT+TGG | + | chr5_4:61345236-61345255 | Msa0861860:CDS | 55.0% | |
CCCCGATCTCTCAACAGATG+AGG | + | chr5_4:61345283-61345302 | Msa0861860:CDS | 55.0% | |
TCTGATCAGAAGCTGGCCGA+TGG | + | chr5_4:61346023-61346042 | Msa0861860:CDS | 55.0% | |
GTTCACCGATCTGGACGAAC+TGG | + | chr5_4:61347629-61347648 | Msa0861860:CDS | 55.0% | |
CACGACCAGTTCGTCCAGAT+CGG | - | chr5_4:61347637-61347656 | None:intergenic | 55.0% | |
! | GCATCACTGGGCGGATTTAG+TGG | + | chr5_4:61348334-61348353 | Msa0861860:CDS | 55.0% |
! | TCACTGGGCGGATTTAGTGG+TGG | + | chr5_4:61348337-61348356 | Msa0861860:CDS | 55.0% |
!! | TTTGTTGGTGGCCGTTCTGG+AGG | + | chr5_4:61348421-61348440 | Msa0861860:CDS | 55.0% |
! | CAATCTGGAGGGGGGTTTTC+TGG | + | chr5_4:61348478-61348497 | Msa0861860:CDS | 55.0% |
! | AGATCTGGTGGATCCTCTGG+TGG | + | chr5_4:61348586-61348605 | Msa0861860:CDS | 55.0% |
!!! | GGTGGTTTTGGTGGATTCGG+TGG | + | chr5_4:61348622-61348641 | Msa0861860:CDS | 55.0% |
!!! | GGTTTTGGTGGATTCGGTGG+TGG | + | chr5_4:61348625-61348644 | Msa0861860:CDS | 55.0% |
!! | TGGTGGATTCGGTGGTGGTT+CGG | + | chr5_4:61348630-61348649 | Msa0861860:CDS | 55.0% |
!! | TCGGATCGCTCTGGTGGATT+CGG | + | chr5_4:61348649-61348668 | Msa0861860:CDS | 55.0% |
!!! | GGTGGATTCGGTGGTGGTTT+TGG | + | chr5_4:61348661-61348680 | Msa0861860:CDS | 55.0% |
TCGGGTAAACCTGGCGCATT+TGG | + | chr5_4:61348694-61348713 | Msa0861860:CDS | 55.0% | |
! | CATTTGGTGATCGTCGTGGC+AGG | + | chr5_4:61348710-61348729 | Msa0861860:CDS | 55.0% |
! | GGGTTGAAGAAGCGCGTCTG+AGG | - | chr5_4:61344154-61344173 | None:intergenic | 60.0% |
GGAGAAGAGAATCTCGGCGG+CGG | - | chr5_4:61344198-61344217 | None:intergenic | 60.0% | |
!! | TGTGAGGTGACGGAGCTCAG+TGG | - | chr5_4:61344231-61344250 | None:intergenic | 60.0% |
CGCGAGAAGCAGAAGAAGCG+CGG | - | chr5_4:61344292-61344311 | None:intergenic | 60.0% | |
GCTTCTTCTGCTTCTCGCGC+TGG | + | chr5_4:61344293-61344312 | Msa0861860:CDS | 60.0% | |
CAGGCGAGGAAAGGATCCTC+TGG | + | chr5_4:61345161-61345180 | Msa0861860:intron | 60.0% | |
GGCGCCAAAACCAAAGCCAG+AGG | - | chr5_4:61345180-61345199 | None:intergenic | 60.0% | |
TCTGGACGAACTGGTCGTGC+TGG | + | chr5_4:61347638-61347657 | Msa0861860:CDS | 60.0% | |
! | CTGGGCGGATTTAGTGGTGG+CGG | + | chr5_4:61348340-61348359 | Msa0861860:CDS | 60.0% |
!! | AGTGGTGGCGGCAGATTTGG+TGG | + | chr5_4:61348352-61348371 | Msa0861860:CDS | 60.0% |
!! | AGATTTGGTGGTGGCGGTGG+TGG | + | chr5_4:61348364-61348383 | Msa0861860:CDS | 60.0% |
!! | GCGGTGGTGGATTTGGTGGT+GGG | + | chr5_4:61348377-61348396 | Msa0861860:CDS | 60.0% |
!! | CGGTGGTGGATTTGGTGGTG+GGG | + | chr5_4:61348378-61348397 | Msa0861860:CDS | 60.0% |
!! | GGTGGTGGATTTGGTGGTGG+GGG | + | chr5_4:61348379-61348398 | Msa0861860:CDS | 60.0% |
! | TCTGGAGGGGGGTTTTCTGG+TGG | + | chr5_4:61348481-61348500 | Msa0861860:CDS | 60.0% |
!! | GATCGCTCTGGTGGATTCGG+TGG | + | chr5_4:61348652-61348671 | Msa0861860:CDS | 60.0% |
CGACGATCACCAAATGCGCC+AGG | - | chr5_4:61348706-61348725 | None:intergenic | 60.0% | |
! | GGCGCATTTGGTGATCGTCG+TGG | + | chr5_4:61348706-61348725 | Msa0861860:CDS | 60.0% |
TCGGCCACGAACCTACATGC+CGG | - | chr5_4:61348851-61348870 | None:intergenic | 60.0% | |
GGGGATGGTTCGCCGTGAGA+GGG | - | chr5_4:61344174-61344193 | None:intergenic | 65.0% | |
AAGAGAATCTCGGCGGCGGC+GGG | - | chr5_4:61344194-61344213 | None:intergenic | 65.0% | |
GAAGAGAATCTCGGCGGCGG+CGG | - | chr5_4:61344195-61344214 | None:intergenic | 65.0% | |
!! | GAGGTGACGGAGCTCAGTGG+CGG | - | chr5_4:61344228-61344247 | None:intergenic | 65.0% |
!! | GGTGGCGGCAGATTTGGTGG+TGG | + | chr5_4:61348355-61348374 | Msa0861860:CDS | 65.0% |
!! | GGCGGCAGATTTGGTGGTGG+CGG | + | chr5_4:61348358-61348377 | Msa0861860:CDS | 65.0% |
!! | GGCAGATTTGGTGGTGGCGG+TGG | + | chr5_4:61348361-61348380 | Msa0861860:CDS | 65.0% |
!! | GGTGGTGGCGGTGGTGGATT+TGG | + | chr5_4:61348370-61348389 | Msa0861860:CDS | 65.0% |
!! | GGTGGCGGTGGTGGATTTGG+TGG | + | chr5_4:61348373-61348392 | Msa0861860:CDS | 65.0% |
!! | GGCGGTGGTGGATTTGGTGG+TGG | + | chr5_4:61348376-61348395 | Msa0861860:CDS | 65.0% |
!! | GGTGGATTTGGTGGTGGGGG+TGG | + | chr5_4:61348382-61348401 | Msa0861860:CDS | 65.0% |
!! | GGATTTGGTGGTGGGGGTGG+TGG | + | chr5_4:61348385-61348404 | Msa0861860:CDS | 65.0% |
! | GGTGGTGGTTCGGATCGCTC+TGG | + | chr5_4:61348640-61348659 | Msa0861860:CDS | 65.0% |
! | GGTGGTTCGGATCGCTCTGG+TGG | + | chr5_4:61348643-61348662 | Msa0861860:CDS | 65.0% |
!! | CGCTCTGGTGGATTCGGTGG+TGG | + | chr5_4:61348655-61348674 | Msa0861860:CDS | 65.0% |
CGGGGATGGTTCGCCGTGAG+AGG | - | chr5_4:61344175-61344194 | None:intergenic | 70.0% | |
AGAGAATCTCGGCGGCGGCG+GGG | - | chr5_4:61344193-61344212 | None:intergenic | 70.0% | |
! | GTGACGGAGCTCAGTGGCGG+CGG | - | chr5_4:61344225-61344244 | None:intergenic | 70.0% |
AATCTCGGCGGCGGCGGGGA+TGG | - | chr5_4:61344189-61344208 | None:intergenic | 75.0% | |
GAGCTCAGTGGCGGCGGTGG+TGG | - | chr5_4:61344219-61344238 | None:intergenic | 75.0% | |
ACGGAGCTCAGTGGCGGCGG+TGG | - | chr5_4:61344222-61344241 | None:intergenic | 75.0% | |
! | GGTGGGGGTGGTGGCCGATC+TGG | + | chr5_4:61348394-61348413 | Msa0861860:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 61344062 | 61349139 | 61344062 | ID=Msa0861860;Name=Msa0861860 |
chr5_4 | mRNA | 61344062 | 61349139 | 61344062 | ID=Msa0861860-mRNA-1;Parent=Msa0861860;Name=Msa0861860-mRNA-1;_AED=0.04;_eAED=0.04;_QI=75|1|1|1|1|1|7|401|591 |
chr5_4 | exon | 61344062 | 61344457 | 61344062 | ID=Msa0861860-mRNA-1:exon:18984;Parent=Msa0861860-mRNA-1 |
chr5_4 | exon | 61344622 | 61344749 | 61344622 | ID=Msa0861860-mRNA-1:exon:18985;Parent=Msa0861860-mRNA-1 |
chr5_4 | exon | 61345164 | 61345575 | 61345164 | ID=Msa0861860-mRNA-1:exon:18986;Parent=Msa0861860-mRNA-1 |
chr5_4 | exon | 61346014 | 61346112 | 61346014 | ID=Msa0861860-mRNA-1:exon:18987;Parent=Msa0861860-mRNA-1 |
chr5_4 | exon | 61346221 | 61346445 | 61346221 | ID=Msa0861860-mRNA-1:exon:18988;Parent=Msa0861860-mRNA-1 |
chr5_4 | exon | 61347590 | 61347751 | 61347590 | ID=Msa0861860-mRNA-1:exon:18989;Parent=Msa0861860-mRNA-1 |
chr5_4 | exon | 61348310 | 61349139 | 61348310 | ID=Msa0861860-mRNA-1:exon:18990;Parent=Msa0861860-mRNA-1 |
chr5_4 | five_prime_UTR | 61344062 | 61344136 | 61344062 | ID=Msa0861860-mRNA-1:five_prime_utr;Parent=Msa0861860-mRNA-1 |
chr5_4 | CDS | 61344137 | 61344457 | 61344137 | ID=Msa0861860-mRNA-1:cds;Parent=Msa0861860-mRNA-1 |
chr5_4 | CDS | 61344622 | 61344749 | 61344622 | ID=Msa0861860-mRNA-1:cds;Parent=Msa0861860-mRNA-1 |
chr5_4 | CDS | 61345164 | 61345575 | 61345164 | ID=Msa0861860-mRNA-1:cds;Parent=Msa0861860-mRNA-1 |
chr5_4 | CDS | 61346014 | 61346112 | 61346014 | ID=Msa0861860-mRNA-1:cds;Parent=Msa0861860-mRNA-1 |
chr5_4 | CDS | 61346221 | 61346445 | 61346221 | ID=Msa0861860-mRNA-1:cds;Parent=Msa0861860-mRNA-1 |
chr5_4 | CDS | 61347590 | 61347751 | 61347590 | ID=Msa0861860-mRNA-1:cds;Parent=Msa0861860-mRNA-1 |
chr5_4 | CDS | 61348310 | 61348738 | 61348310 | ID=Msa0861860-mRNA-1:cds;Parent=Msa0861860-mRNA-1 |
chr5_4 | three_prime_UTR | 61348739 | 61349139 | 61348739 | ID=Msa0861860-mRNA-1:three_prime_utr;Parent=Msa0861860-mRNA-1 |
Gene Sequence |
Protein sequence |