AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0413870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0413870 MtrunA17_Chr3g0106491 92.982 513 29 2 1 511 1 508 0.0 918
Msa0413870 MtrunA17_Chr5g0432161 56.966 567 167 18 1 510 35 581 1.13e-163 476
Msa0413870 MtrunA17_Chr7g0243891 47.818 527 200 21 39 511 37 542 1.04e-125 378
Msa0413870 MtrunA17_Chr4g0004911 46.089 473 202 14 61 510 47 489 3.25e-106 326
Msa0413870 MtrunA17_Chr5g0445311 44.313 422 180 11 40 427 28 428 3.38e-94 296
Msa0413870 MtrunA17_Chr5g0445311 49.351 77 36 2 363 439 200 273 8.90e-14 73.9
Msa0413870 MtrunA17_Chr3g0101131 43.439 442 183 13 40 425 47 477 5.55e-92 292
Msa0413870 MtrunA17_Chr3g0101131 40.650 123 63 4 183 300 406 523 5.66e-17 84.0
Msa0413870 MtrunA17_Chr5g0418191 50.719 278 128 5 185 457 140 413 2.64e-82 262
Msa0413870 MtrunA17_Chr7g0218081 40.144 416 192 10 41 431 95 478 1.36e-80 260
Msa0413870 MtrunA17_Chr7g0218081 47.727 88 41 2 183 269 401 484 1.20e-15 79.7
Msa0413870 MtrunA17_Chr7g0218081 44.340 106 43 3 363 466 228 319 1.67e-15 79.0
Msa0413870 MtrunA17_Chr4g0042831 52.542 236 76 6 191 425 140 340 6.37e-73 236
Msa0413870 MtrunA17_Chr7g0263531 51.064 235 110 2 193 422 186 420 1.52e-72 237
Msa0413870 MtrunA17_Chr7g0263531 50.000 76 37 1 197 271 362 437 1.40e-15 79.0
Msa0413870 MtrunA17_Chr5g0447701 41.111 270 131 5 183 442 80 331 1.69e-58 198
Msa0413870 MtrunA17_Chr3g0079691 62.319 138 49 1 290 427 425 559 1.56e-47 175
Msa0413870 MtrunA17_Chr3g0079691 42.437 238 95 8 60 259 110 343 2.79e-38 149
Msa0413870 MtrunA17_Chr3g0079691 54.430 79 34 2 363 440 280 357 6.65e-16 80.9
Msa0413870 MtrunA17_Chr3g0079691 44.340 106 48 4 183 285 486 583 1.10e-15 80.1
Msa0413870 MtrunA17_Chr4g0074001 40.329 243 127 5 195 425 185 421 9.81e-46 167
Msa0413870 MtrunA17_Chr4g0074001 53.731 67 30 1 195 260 358 424 2.23e-16 82.0
Msa0413870 MtrunA17_Chr7g0249311 48.128 187 80 3 321 491 350 535 3.23e-43 162
Msa0413870 MtrunA17_Chr7g0249311 70.000 70 21 0 192 261 175 244 1.08e-26 114
Msa0413870 MtrunA17_Chr7g0249311 36.601 153 73 6 279 427 112 244 3.89e-15 78.2
Msa0413870 MtrunA17_Chr7g0249301 79.268 82 17 0 344 425 273 354 1.16e-41 153
Msa0413870 MtrunA17_Chr7g0249301 67.692 65 21 0 197 261 63 127 2.81e-23 101
Msa0413870 MtrunA17_Chr7g0249301 39.683 126 51 4 330 454 45 146 3.04e-15 77.4
Msa0413870 MtrunA17_Chr7g0249301 50.667 75 32 2 183 256 283 353 3.39e-15 77.4
Msa0413870 MtrunA17_Chr5g0447711 32.174 230 136 4 197 426 84 293 2.36e-35 134
Msa0413870 MtrunA17_Chr1g0188941 62.791 86 32 0 339 424 27 112 1.90e-34 125
Msa0413870 MtrunA17_Chr1g0188941 56.667 60 25 1 196 254 51 110 4.33e-17 77.4
Msa0413870 MtrunA17_Chr8g0335811 67.105 76 25 0 344 419 135 210 3.20e-31 120
Msa0413870 MtrunA17_Chr8g0335811 52.113 71 29 2 182 251 144 210 1.41e-16 79.0
Msa0413870 MtrunA17_Chr5g0432071 47.857 140 57 4 170 299 78 211 2.82e-30 117
Msa0413870 MtrunA17_Chr5g0432071 48.148 81 38 2 363 440 104 183 9.22e-16 76.3
Msa0413870 MtrunA17_Chr3g0129361 64.865 74 26 0 346 419 127 200 3.71e-29 114
Msa0413870 MtrunA17_Chr3g0129361 47.887 71 32 2 182 251 134 200 1.09e-14 73.6
Msa0413870 MtrunA17_Chr8g0383351 64.000 75 26 1 346 419 142 216 1.10e-27 110
Msa0413870 MtrunA17_Chr8g0383351 56.140 57 24 1 196 251 160 216 8.73e-15 73.9
Msa0413870 MtrunA17_Chr2g0294231 62.338 77 29 0 347 423 187 263 1.11e-26 111
Msa0413870 MtrunA17_Chr2g0294231 46.512 86 45 1 196 280 203 288 1.57e-16 81.3
Msa0413870 MtrunA17_Chr1g0150801 61.842 76 28 1 344 419 84 158 1.67e-26 105
Msa0413870 MtrunA17_Chr1g0150801 47.222 72 33 2 182 252 92 159 8.00e-16 75.1
Msa0413870 MtrunA17_Chr7g0270191 49.091 110 50 2 347 452 129 236 2.52e-26 108
Msa0413870 MtrunA17_Chr7g0270191 49.383 81 36 2 196 275 145 221 4.49e-16 79.0
Msa0413870 MtrunA17_Chr5g0418781 57.647 85 35 1 342 425 103 187 2.58e-26 108
Msa0413870 MtrunA17_Chr5g0418781 40.196 102 56 2 151 251 83 180 1.34e-13 71.2
Msa0413870 MtrunA17_Chr5g0443131 62.667 75 28 0 349 423 143 217 4.92e-26 108
Msa0413870 MtrunA17_Chr5g0443131 52.239 67 31 1 196 261 157 223 2.40e-14 73.9
Msa0413870 MtrunA17_Chr4g0051881 61.333 75 29 0 349 423 164 238 8.52e-26 108
Msa0413870 MtrunA17_Chr4g0051881 45.263 95 50 2 196 289 178 271 2.78e-18 86.3
Msa0413870 MtrunA17_Chr1g0194481 52.747 91 43 0 347 437 142 232 1.16e-25 107
Msa0413870 MtrunA17_Chr1g0194481 44.444 81 40 2 183 258 141 221 2.98e-15 77.0
Msa0413870 MtrunA17_Chr8g0386241 56.250 80 35 0 342 421 82 161 1.19e-25 103
Msa0413870 MtrunA17_Chr8g0386241 43.820 89 44 3 165 252 77 160 2.31e-17 80.1
Msa0413870 MtrunA17_Chr7g0224801 54.321 81 37 0 354 434 84 164 7.93e-25 100
Msa0413870 MtrunA17_Chr7g0224801 50.000 72 31 2 182 252 83 150 1.16e-15 75.1
Msa0413870 MtrunA17_Chr3g0099641 47.727 88 45 1 336 422 224 311 2.04e-24 106
Msa0413870 MtrunA17_Chr3g0099641 41.975 81 45 2 197 275 252 332 1.57e-13 72.8
Msa0413870 MtrunA17_Chr4g0060271 53.846 78 35 1 346 422 238 315 3.37e-24 106
Msa0413870 MtrunA17_Chr4g0060271 50.000 62 29 2 196 255 255 316 4.49e-13 71.6
Msa0413870 MtrunA17_Chr2g0288871 54.430 79 35 1 345 422 287 365 4.10e-24 105
Msa0413870 MtrunA17_Chr2g0288871 37.615 109 53 3 161 254 257 365 2.38e-13 72.4
Msa0413870 MtrunA17_Chr8g0383251 54.795 73 33 0 350 422 95 167 4.53e-24 99.4
Msa0413870 MtrunA17_Chr8g0383251 45.946 74 35 2 182 254 98 167 6.79e-14 70.1
Msa0413870 MtrunA17_Chr4g0051181 55.128 78 34 1 347 423 227 304 5.98e-24 104
Msa0413870 MtrunA17_Chr4g0051181 53.226 62 27 2 197 256 244 305 7.69e-15 77.0
Msa0413870 MtrunA17_Chr4g0075201 54.430 79 35 1 345 422 249 327 8.17e-24 104
Msa0413870 MtrunA17_Chr4g0075201 38.889 90 49 3 173 256 240 329 6.26e-13 70.9
Msa0413870 MtrunA17_Chr2g0322391 54.430 79 35 1 345 422 331 409 1.12e-23 104
Msa0413870 MtrunA17_Chr2g0322391 41.463 82 46 2 196 275 349 430 2.61e-12 69.3
Msa0413870 MtrunA17_Chr7g0270831 38.889 144 65 4 310 452 171 292 1.52e-23 103
Msa0413870 MtrunA17_Chr7g0270831 44.000 75 40 2 197 269 217 291 1.42e-13 72.8
Msa0413870 MtrunA17_Chr4g0068541 53.488 86 40 0 347 432 192 277 1.68e-23 102
Msa0413870 MtrunA17_Chr4g0068541 57.377 61 25 1 196 255 208 268 5.85e-15 77.0
Msa0413870 MtrunA17_Chr7g0248721 54.023 87 39 1 333 419 111 196 1.85e-23 98.6
Msa0413870 MtrunA17_Chr7g0248721 56.897 58 23 2 196 252 141 197 3.93e-13 68.9
Msa0413870 MtrunA17_Chr3g0129321 54.667 75 34 0 349 423 104 178 3.96e-23 97.4
Msa0413870 MtrunA17_Chr3g0129321 45.333 75 36 2 182 255 108 178 1.40e-13 69.7
Msa0413870 MtrunA17_Chr7g0216891 54.667 75 33 1 346 419 202 276 1.50e-22 101
Msa0413870 MtrunA17_Chr7g0216891 51.613 62 28 2 196 255 219 280 4.66e-13 71.6
Msa0413870 MtrunA17_Chr1g0147881 41.379 145 73 4 281 423 189 323 2.65e-22 98.2
Msa0413870 MtrunA17_Chr1g0147881 48.571 70 34 2 197 264 263 332 1.37e-12 68.9
Msa0413870 MtrunA17_Chr2g0302391 48.936 94 46 2 331 422 178 271 6.45e-22 98.2
Msa0413870 MtrunA17_Chr2g0302391 45.205 73 38 2 197 267 212 284 7.64e-12 67.4
Msa0413870 MtrunA17_Chr4g0053281 43.636 110 46 3 319 427 237 331 7.17e-22 96.7
Msa0413870 MtrunA17_Chr4g0053281 50.000 66 31 2 197 260 267 332 3.34e-14 73.9
Msa0413870 MtrunA17_Chr4g0025051 43.564 101 56 1 324 423 296 396 1.12e-21 98.6
Msa0413870 MtrunA17_Chr4g0025051 30.216 139 91 3 149 281 284 422 7.72e-13 70.9
Msa0413870 MtrunA17_Chr4g0025061 45.263 95 51 1 330 423 327 421 1.89e-21 97.8
Msa0413870 MtrunA17_Chr4g0025061 33.333 135 84 3 153 281 313 447 2.02e-15 79.0
Msa0413870 MtrunA17_Chr3g0136961 54.795 73 30 3 350 419 123 195 1.17e-20 92.4
Msa0413870 MtrunA17_Chr3g0136961 45.000 80 38 3 197 274 139 214 3.46e-14 73.2
Msa0413870 MtrunA17_Chr1g0189391 56.338 71 30 1 350 419 84 154 1.17e-20 93.2
Msa0413870 MtrunA17_Chr1g0189391 45.455 77 39 3 196 270 97 172 2.86e-12 68.2
Msa0413870 MtrunA17_Chr5g0401821 53.165 79 36 1 344 421 180 258 1.78e-20 91.3
Msa0413870 MtrunA17_Chr5g0401821 54.386 57 24 2 197 251 200 256 2.30e-13 70.5
Msa0413870 MtrunA17_Chr7g0238921 64.912 57 20 0 363 419 124 180 2.26e-20 92.0
Msa0413870 MtrunA17_Chr7g0238921 59.649 57 22 1 196 251 124 180 1.47e-14 74.7
Msa0413870 MtrunA17_Chr6g0485431 54.667 75 33 1 349 422 140 214 2.97e-20 92.4
Msa0413870 MtrunA17_Chr6g0485431 39.796 98 51 3 187 276 145 242 4.26e-13 70.9
Msa0413870 MtrunA17_Chr4g0071521 47.368 95 44 3 343 436 228 317 1.25e-19 89.7
Msa0413870 MtrunA17_Chr4g0071521 46.032 63 32 2 197 257 246 308 2.57e-11 65.1
Msa0413870 MtrunA17_Chr4g0001361 45.714 105 41 5 361 449 160 264 2.04e-19 89.4
Msa0413870 MtrunA17_Chr4g0001361 53.333 60 26 2 197 254 163 222 1.78e-15 77.4
Msa0413870 MtrunA17_Chr6g0468181 67.241 58 19 0 212 269 18 75 4.49e-19 83.2
Msa0413870 MtrunA17_Chr2g0333851 54.688 64 28 1 361 423 167 230 2.81e-18 85.9
Msa0413870 MtrunA17_Chr2g0333851 50.000 60 28 2 197 254 170 229 5.42e-14 73.2
Msa0413870 MtrunA17_Chr1g0150271 39.048 105 49 4 361 455 99 198 4.02e-18 84.3
Msa0413870 MtrunA17_Chr1g0150271 48.333 60 29 2 197 254 102 161 1.47e-12 67.8
Msa0413870 MtrunA17_Chr1g0150281 47.945 73 35 2 350 419 125 197 8.89e-18 84.0
Msa0413870 MtrunA17_Chr1g0150281 50.877 57 26 2 197 251 141 197 3.91e-13 70.1
Msa0413870 MtrunA17_Chr1g0184691 50.000 78 38 1 343 419 273 350 1.02e-17 84.7
Msa0413870 MtrunA17_Chr1g0184691 54.237 59 25 2 197 253 294 352 3.44e-13 70.9
Msa0413870 MtrunA17_Chr4g0024391 31.343 134 89 2 325 457 191 322 1.25e-16 82.4
Msa0413870 MtrunA17_Chr3g0139021 48.101 79 40 1 343 420 294 372 1.39e-16 81.6
Msa0413870 MtrunA17_Chr8g0379461 46.667 75 39 1 364 437 77 151 3.63e-16 78.2
Msa0413870 MtrunA17_Chr8g0379461 38.710 93 53 3 197 287 77 167 4.34e-13 69.3
Msa0413870 MtrunA17_Chr7g0228941 46.154 78 41 1 343 419 32 109 4.34e-16 74.7
Msa0413870 MtrunA17_Chr7g0228941 39.744 78 41 3 180 251 32 109 7.44e-12 62.8
Msa0413870 MtrunA17_Chr2g0284321 50.704 71 34 1 364 433 36 106 5.78e-16 77.0
Msa0413870 MtrunA17_Chr2g0284321 39.640 111 63 4 197 303 36 146 7.10e-14 70.9
Msa0413870 MtrunA17_Chr2g0289181 56.250 64 26 2 197 258 15 78 1.23e-15 76.3
Msa0413870 MtrunA17_Chr2g0289181 54.098 61 27 1 364 423 15 75 6.16e-15 74.3
Msa0413870 MtrunA17_Chr2g0319961 50.794 63 30 1 364 425 81 143 2.21e-15 76.3
Msa0413870 MtrunA17_Chr7g0270051 46.575 73 38 1 364 435 54 126 3.97e-15 75.5
Msa0413870 MtrunA17_Chr7g0270051 50.000 68 32 2 197 262 54 121 8.95e-14 71.6
Msa0413870 MtrunA17_Chr1g0202461 42.353 85 47 2 344 427 243 326 6.51e-15 76.6
Msa0413870 MtrunA17_Chr1g0202461 42.105 76 38 3 195 268 260 331 9.25e-11 63.5
Msa0413870 MtrunA17_Chr8g0348311 45.349 86 45 2 364 447 156 241 1.54e-14 75.1
Msa0413870 MtrunA17_Chr8g0387501 45.946 74 39 1 362 434 128 201 2.96e-14 73.2
Msa0413870 MtrunA17_Chr8g0387501 45.946 74 34 3 197 268 130 199 1.86e-12 67.8
Msa0413870 MtrunA17_Chr2g0293481 47.692 65 33 1 364 427 268 332 1.96e-13 72.4
Msa0413870 MtrunA17_Chr7g0248691 46.667 75 38 2 364 436 155 229 3.21e-13 70.9
Msa0413870 MtrunA17_Chr7g0248691 28.692 237 145 8 109 338 65 284 3.69e-12 67.4
Msa0413870 MtrunA17_Chr1g0188961 59.615 52 20 1 383 434 3 53 6.39e-13 63.9
Msa0413870 MtrunA17_Chr1g0188971 60.000 45 18 0 339 383 38 82 8.71e-13 63.9
Msa0413870 MtrunA17_Chr3g0126391 37.719 114 56 5 196 294 133 246 3.45e-12 67.8
Msa0413870 MtrunA17_Chr3g0126391 37.719 114 58 3 362 472 132 235 1.01e-11 66.2
Msa0413870 MtrunA17_Chr8g0387981 51.724 58 24 2 196 249 132 189 4.65e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0413870 AT2G38470.1 43.548 558 227 19 1 510 1 518 5.95e-111 339
Msa0413870 AT5G07100.1 48.087 366 91 10 62 425 28 296 1.73e-93 287
Msa0413870 AT2G03340.1 45.226 398 187 9 39 429 108 481 5.18e-93 293
Msa0413870 AT2G03340.1 60.000 70 27 1 363 432 250 318 1.41e-19 92.0
Msa0413870 AT4G26640.2 43.409 440 176 12 40 432 37 450 6.72e-91 288
Msa0413870 AT4G26640.7 43.953 430 173 12 51 432 1 410 1.66e-90 286
Msa0413870 AT2G30250.1 45.000 440 173 15 1 423 1 388 3.14e-89 279
Msa0413870 AT2G30250.1 55.385 65 28 1 197 260 329 393 8.06e-16 79.7
Msa0413870 AT4G26640.5 56.911 246 93 4 195 432 34 274 5.85e-87 273
Msa0413870 AT4G26640.6 56.911 246 93 4 195 432 34 274 5.85e-87 273
Msa0413870 AT4G26640.4 56.911 246 93 4 195 432 34 274 5.85e-87 273
Msa0413870 AT4G26640.3 56.911 246 93 4 195 432 34 274 5.85e-87 273
Msa0413870 AT4G26640.1 56.911 246 93 4 195 432 138 378 3.55e-86 274
Msa0413870 AT5G07100.2 59.583 240 43 7 189 425 15 203 2.56e-83 257
Msa0413870 AT5G07100.4 59.583 240 43 7 189 425 15 203 2.56e-83 257
Msa0413870 AT5G07100.5 59.583 240 43 7 189 425 15 203 2.56e-83 257
Msa0413870 AT5G07100.3 59.583 240 43 7 189 425 15 203 2.56e-83 257
Msa0413870 AT1G13960.1 43.032 409 165 12 39 422 103 468 7.35e-83 266
Msa0413870 AT1G13960.1 52.273 88 27 2 356 429 208 294 8.67e-19 89.7
Msa0413870 AT1G13960.2 54.435 248 86 4 195 422 75 315 1.13e-79 253
Msa0413870 AT1G13960.2 52.273 88 27 2 356 429 55 141 6.53e-19 89.0
Msa0413870 AT3G01080.1 55.702 228 73 4 195 422 166 365 7.13e-73 238
Msa0413870 AT3G01080.2 55.702 228 73 4 195 422 204 403 1.05e-72 238
Msa0413870 AT4G26440.1 37.037 459 188 14 67 476 88 494 4.23e-72 239
Msa0413870 AT2G04880.2 45.238 252 111 5 190 425 105 345 1.11e-61 209
Msa0413870 AT2G37260.3 45.736 258 99 6 193 421 82 327 3.45e-59 199
Msa0413870 AT2G37260.2 45.736 258 99 6 193 421 80 325 3.75e-59 199
Msa0413870 AT2G04880.1 42.804 271 114 5 190 425 105 369 1.41e-58 202
Msa0413870 AT2G04880.1 53.731 67 30 1 189 254 300 366 5.65e-15 77.8
Msa0413870 AT2G37260.1 45.736 258 99 6 193 421 162 407 1.91e-58 200
Msa0413870 AT4G30935.1 43.162 234 119 8 197 425 169 393 7.48e-49 175
Msa0413870 AT4G30935.1 40.179 112 61 3 197 307 332 438 4.69e-16 80.9
Msa0413870 AT4G12020.6 46.798 203 94 3 191 383 463 661 9.89e-47 175
Msa0413870 AT4G12020.6 52.459 61 28 1 362 422 467 526 3.31e-12 70.1
Msa0413870 AT4G12020.8 46.798 203 94 3 191 383 463 661 9.89e-47 175
Msa0413870 AT4G12020.8 52.459 61 28 1 362 422 467 526 3.31e-12 70.1
Msa0413870 AT4G12020.1 46.798 203 94 3 191 383 463 661 1.10e-46 175
Msa0413870 AT4G12020.1 52.459 61 28 1 362 422 467 526 3.43e-12 70.1
Msa0413870 AT4G12020.9 46.798 203 94 3 191 383 463 661 1.10e-46 175
Msa0413870 AT4G12020.9 52.459 61 28 1 362 422 467 526 3.43e-12 70.1
Msa0413870 AT4G12020.10 46.798 203 94 3 191 383 463 661 1.16e-46 175
Msa0413870 AT4G12020.10 52.459 61 28 1 362 422 467 526 3.52e-12 70.1
Msa0413870 AT4G12020.3 46.798 203 94 3 191 383 463 661 1.17e-46 175
Msa0413870 AT4G12020.3 52.459 61 28 1 362 422 467 526 3.55e-12 69.7
Msa0413870 AT4G12020.7 46.798 203 94 3 191 383 463 661 1.17e-46 175
Msa0413870 AT4G12020.7 52.459 61 28 1 362 422 467 526 3.49e-12 70.1
Msa0413870 AT4G12020.2 46.798 203 94 3 191 383 463 661 1.18e-46 175
Msa0413870 AT4G12020.2 52.459 61 28 1 362 422 467 526 3.46e-12 70.1
Msa0413870 AT4G12020.4 46.798 203 94 3 191 383 463 661 1.19e-46 175
Msa0413870 AT4G12020.4 52.459 61 28 1 362 422 467 526 3.43e-12 70.1
Msa0413870 AT4G12020.11 46.798 203 94 3 191 383 463 661 1.32e-46 175
Msa0413870 AT4G12020.11 52.459 61 28 1 362 422 467 526 4.38e-12 69.3
Msa0413870 AT4G12020.5 46.798 203 94 3 191 383 396 594 1.52e-46 175
Msa0413870 AT4G12020.5 52.459 61 28 1 362 422 400 459 3.78e-12 69.7
Msa0413870 AT5G56270.1 74.510 102 24 1 324 425 450 549 1.12e-45 170
Msa0413870 AT5G56270.1 39.013 223 103 7 67 259 117 336 5.97e-30 124
Msa0413870 AT5G56270.1 55.844 77 25 3 183 256 478 548 3.00e-16 82.4
Msa0413870 AT5G56270.1 59.677 62 24 1 363 424 273 333 6.12e-16 81.3
Msa0413870 AT2G44745.1 67.105 76 25 0 344 419 126 201 1.88e-31 121
Msa0413870 AT2G44745.1 52.113 71 29 2 182 251 135 201 1.45e-16 79.3
Msa0413870 AT4G18170.1 52.727 110 45 2 320 422 122 231 1.61e-28 115
Msa0413870 AT4G18170.1 47.436 78 36 2 183 255 155 232 1.88e-15 77.8
Msa0413870 AT4G39410.1 64.474 76 27 0 344 419 204 279 2.10e-28 115
Msa0413870 AT4G39410.1 43.000 100 47 4 182 280 213 303 1.29e-15 78.2
Msa0413870 AT1G29860.1 64.935 77 27 0 347 423 120 196 1.75e-27 112
Msa0413870 AT1G29860.1 58.333 60 24 1 196 254 136 195 3.64e-15 76.3
Msa0413870 AT1G55600.1 60.714 84 32 1 339 422 284 366 2.61e-27 115
Msa0413870 AT1G55600.1 54.430 79 30 2 184 256 290 368 6.30e-17 84.0
Msa0413870 AT5G49520.1 64.198 81 28 1 347 426 205 285 5.02e-27 113
Msa0413870 AT5G49520.1 51.389 72 34 1 196 266 221 292 1.57e-15 79.0
Msa0413870 AT1G69310.4 58.140 86 35 1 342 426 126 211 7.79e-27 110
Msa0413870 AT1G69310.4 47.222 72 33 2 185 251 132 203 5.68e-13 70.1
Msa0413870 AT1G69310.2 58.140 86 35 1 342 426 126 211 7.79e-27 110
Msa0413870 AT1G69310.2 47.222 72 33 2 185 251 132 203 5.68e-13 70.1
Msa0413870 AT1G69310.1 58.140 86 35 1 342 426 126 211 7.79e-27 110
Msa0413870 AT1G69310.1 47.222 72 33 2 185 251 132 203 5.68e-13 70.1
Msa0413870 AT1G64000.1 58.750 80 33 0 340 419 91 170 7.80e-27 107
Msa0413870 AT1G64000.1 56.897 58 24 1 196 252 114 171 6.42e-16 76.6
Msa0413870 AT4G04450.2 41.538 130 63 2 337 465 172 289 1.83e-26 112
Msa0413870 AT4G04450.2 44.156 77 41 2 197 271 199 275 9.55e-14 73.6
Msa0413870 AT3G01970.1 56.471 85 37 0 350 434 52 136 1.97e-26 105
Msa0413870 AT3G01970.1 50.704 71 30 2 182 251 55 121 2.15e-14 70.9
Msa0413870 AT4G04450.1 41.538 130 63 2 337 465 266 383 7.93e-26 111
Msa0413870 AT4G04450.1 44.156 77 41 2 197 271 293 369 1.40e-13 73.6
Msa0413870 AT5G26170.1 60.000 70 28 0 350 419 100 169 1.31e-25 103
Msa0413870 AT5G26170.1 47.887 71 32 2 182 251 103 169 1.88e-16 77.8
Msa0413870 AT3G01080.3 69.697 66 19 1 195 260 204 268 1.53e-25 107
Msa0413870 AT3G01080.3 55.224 67 29 1 363 429 205 270 9.86e-16 79.0
Msa0413870 AT5G13080.1 61.111 72 28 0 350 421 54 125 1.72e-25 102
Msa0413870 AT5G13080.1 51.389 72 30 2 182 252 57 124 1.74e-17 79.7
Msa0413870 AT5G41570.1 59.211 76 31 0 344 419 79 154 2.45e-25 103
Msa0413870 AT5G41570.1 40.404 99 50 3 159 252 61 155 1.37e-16 78.2
Msa0413870 AT5G46350.1 57.500 80 34 0 349 428 169 248 3.51e-25 106
Msa0413870 AT5G46350.1 42.308 104 53 3 186 284 169 270 1.43e-15 78.2
Msa0413870 AT5G15130.2 48.077 104 39 2 346 448 168 257 4.46e-25 108
Msa0413870 AT5G15130.2 32.456 114 71 3 161 272 150 259 1.44e-12 70.5
Msa0413870 AT5G15130.1 48.077 104 39 2 346 448 210 299 4.90e-25 108
Msa0413870 AT5G15130.1 32.456 114 71 3 161 272 192 301 1.40e-12 70.5
Msa0413870 AT2G46130.1 53.571 84 39 0 336 419 3 86 9.79e-25 99.0
Msa0413870 AT2G46130.1 58.621 58 23 1 196 252 30 87 9.43e-16 73.6
Msa0413870 AT2G47260.1 59.211 76 31 0 347 422 158 233 1.07e-24 105
Msa0413870 AT2G47260.1 33.594 128 80 2 167 293 149 272 6.01e-14 73.6
Msa0413870 AT5G64810.1 59.155 71 29 0 350 420 97 167 1.21e-24 101
Msa0413870 AT5G64810.1 33.835 133 66 5 120 251 55 166 5.98e-14 70.9
Msa0413870 AT4G22070.4 52.874 87 40 1 337 422 271 357 2.86e-24 106
Msa0413870 AT4G22070.4 51.667 60 27 2 197 254 298 357 8.69e-13 71.2
Msa0413870 AT4G22070.3 52.874 87 40 1 337 422 271 357 2.86e-24 106
Msa0413870 AT4G22070.3 51.667 60 27 2 197 254 298 357 8.69e-13 71.2
Msa0413870 AT4G22070.2 52.874 87 40 1 337 422 271 357 2.86e-24 106
Msa0413870 AT4G22070.2 51.667 60 27 2 197 254 298 357 8.69e-13 71.2
Msa0413870 AT4G22070.1 52.874 87 40 1 337 422 271 357 2.86e-24 106
Msa0413870 AT4G22070.1 51.667 60 27 2 197 254 298 357 8.69e-13 71.2
Msa0413870 AT1G68150.1 53.409 88 37 2 337 423 212 296 3.02e-24 104
Msa0413870 AT1G68150.1 41.667 108 55 3 197 296 236 343 1.18e-15 79.0
Msa0413870 AT1G62300.1 55.696 79 34 1 345 422 294 372 8.45e-24 105
Msa0413870 AT1G62300.1 31.724 145 89 4 116 254 232 372 1.67e-13 73.6
Msa0413870 AT1G18860.1 52.564 78 36 1 346 422 222 299 2.29e-22 100
Msa0413870 AT1G18860.1 50.820 61 28 2 196 254 239 299 7.09e-12 68.2
Msa0413870 AT4G01720.1 55.844 77 33 1 347 422 223 299 2.34e-22 100
Msa0413870 AT4G01720.1 50.820 61 28 2 196 254 239 299 1.19e-12 70.5
Msa0413870 AT1G69310.3 54.651 86 34 2 342 426 126 207 4.60e-22 96.7
Msa0413870 AT2G23320.1 51.899 79 34 2 344 421 224 299 8.24e-21 93.6
Msa0413870 AT2G23320.1 56.140 57 23 2 197 251 241 297 5.00e-13 70.5
Msa0413870 AT4G24240.1 49.438 89 44 1 343 430 261 349 1.40e-20 93.6
Msa0413870 AT4G24240.1 56.140 57 23 2 197 251 282 338 1.21e-13 72.8
Msa0413870 AT4G31550.1 56.410 78 30 2 344 420 230 304 1.81e-20 92.8
Msa0413870 AT4G31550.1 57.895 57 22 2 197 251 247 303 7.51e-14 73.2
Msa0413870 AT4G31550.2 56.410 78 30 2 344 420 229 303 1.85e-20 92.8
Msa0413870 AT4G31550.2 57.895 57 22 2 197 251 246 302 7.58e-14 73.2
Msa0413870 AT3G62340.1 55.263 76 34 0 347 422 102 177 2.21e-20 91.7
Msa0413870 AT3G62340.1 48.000 75 34 2 186 255 104 178 3.57e-14 73.6
Msa0413870 AT2G24570.1 57.692 78 29 2 343 419 226 300 2.87e-20 92.0
Msa0413870 AT2G24570.1 50.704 71 33 2 197 265 244 314 4.13e-14 73.9
Msa0413870 AT2G46130.2 50.000 84 38 1 336 419 3 82 4.11e-20 85.9
Msa0413870 AT2G46130.2 53.448 58 22 2 196 252 30 83 3.13e-11 60.8
Msa0413870 AT2G21900.1 50.667 75 34 1 352 423 95 169 2.26e-19 87.0
Msa0413870 AT2G21900.1 34.188 117 67 3 147 254 53 168 5.76e-14 71.2
Msa0413870 AT5G28650.1 51.948 77 36 1 344 419 243 319 4.96e-19 88.6
Msa0413870 AT5G28650.1 48.438 64 31 2 197 258 263 326 1.08e-11 66.6
Msa0413870 AT1G80840.1 50.000 70 34 1 361 429 144 213 6.31e-19 87.8
Msa0413870 AT1G80840.1 50.000 60 28 2 197 254 147 206 2.29e-13 71.2
Msa0413870 AT2G30590.1 52.564 78 36 1 343 419 293 370 1.52e-18 87.8
Msa0413870 AT2G30590.1 54.237 59 25 2 197 253 314 372 6.48e-13 70.9
Msa0413870 AT4G31800.2 50.725 69 32 2 356 422 103 171 1.71e-18 85.5
Msa0413870 AT4G31800.2 42.667 75 41 2 197 269 112 186 2.33e-13 70.5
Msa0413870 AT3G04670.1 51.948 77 36 1 344 419 243 319 1.89e-18 87.0
Msa0413870 AT3G04670.1 50.000 64 30 2 197 258 263 326 1.82e-12 68.9
Msa0413870 AT4G31800.1 50.725 69 32 2 356 422 168 236 3.14e-18 85.9
Msa0413870 AT4G31800.1 42.667 75 41 2 197 269 177 251 4.08e-13 70.9
Msa0413870 AT5G43290.1 61.017 59 23 0 361 419 112 170 3.40e-18 85.1
Msa0413870 AT5G43290.1 62.069 58 21 1 195 251 113 170 1.46e-15 77.4
Msa0413870 AT2G25000.2 50.000 62 30 1 362 422 102 163 1.63e-17 82.0
Msa0413870 AT2G25000.2 44.286 70 37 2 197 264 104 173 3.83e-12 66.6
Msa0413870 AT2G25000.4 50.000 62 30 1 362 422 102 163 1.63e-17 82.0
Msa0413870 AT2G25000.4 44.286 70 37 2 197 264 104 173 3.83e-12 66.6
Msa0413870 AT2G25000.3 50.000 62 30 1 362 422 124 185 3.27e-17 81.6
Msa0413870 AT2G25000.3 44.286 70 37 2 197 264 126 195 5.87e-12 66.2
Msa0413870 AT2G25000.1 50.000 62 30 1 362 422 145 206 4.61e-17 81.6
Msa0413870 AT2G25000.1 44.286 70 37 2 197 264 147 216 8.51e-12 66.2
Msa0413870 AT4G23550.1 42.553 94 49 2 352 440 129 222 6.35e-17 82.0
Msa0413870 AT1G69810.2 45.570 79 41 2 346 422 128 206 8.73e-17 82.0
Msa0413870 AT1G69810.1 45.570 79 41 2 346 422 186 264 1.11e-16 82.4
Msa0413870 AT4G01250.1 46.512 86 44 2 364 447 129 214 1.36e-15 77.8
Msa0413870 AT4G01250.1 34.959 123 69 5 197 316 129 243 6.78e-11 63.9
Msa0413870 AT1G29280.1 51.667 60 28 1 364 422 75 134 6.34e-15 75.1
Msa0413870 AT1G29280.1 47.619 63 31 2 197 257 75 137 5.42e-12 66.6
Msa0413870 AT3G58710.1 36.170 141 77 4 294 429 4 136 3.44e-14 73.2
Msa0413870 AT3G58710.1 46.753 77 38 3 197 271 72 147 3.38e-11 64.3
Msa0413870 AT5G45260.1 33.824 136 77 4 141 272 1162 1288 4.63e-14 75.9
Msa0413870 AT3G58710.2 50.746 67 30 2 364 429 71 135 6.97e-14 72.4
Msa0413870 AT3G58710.2 46.753 77 38 3 197 271 71 146 3.35e-11 64.3
Msa0413870 AT5G52830.1 42.353 85 47 2 344 427 147 230 9.47e-14 73.2
Msa0413870 AT5G52830.1 33.846 130 68 6 195 316 164 283 3.67e-12 68.2
Msa0413870 AT2G34830.1 49.206 63 31 1 364 425 216 278 2.66e-13 72.4
Msa0413870 AT2G34830.2 47.692 65 33 1 364 427 225 289 2.66e-13 72.4
Msa0413870 AT1G30650.1 49.206 63 31 1 364 425 218 280 5.63e-13 71.2
Msa0413870 AT2G40740.1 43.750 80 38 3 196 268 173 252 5.09e-12 67.0
Msa0413870 AT5G45050.1 47.692 65 33 1 364 427 1181 1245 6.32e-12 68.9
Msa0413870 AT5G45050.4 47.692 65 33 1 364 427 1042 1106 6.43e-12 68.9
Msa0413870 AT5G45050.4 42.857 91 46 4 175 261 1018 1106 9.80e-11 65.1
Msa0413870 AT2G40740.3 43.750 80 38 3 196 268 182 261 6.50e-12 67.0
Msa0413870 AT5G45050.2 47.692 65 33 1 364 427 1153 1217 6.52e-12 68.9
Msa0413870 AT5G24110.1 46.032 63 30 2 191 249 108 170 3.28e-11 64.7
Msa0413870 AT4G11070.2 41.860 86 39 4 187 261 95 180 4.64e-11 64.3
Msa0413870 AT2G46400.1 35.632 87 52 2 350 432 91 177 5.06e-11 64.3
Msa0413870 AT2G46400.1 42.254 71 37 2 196 262 104 174 6.42e-11 63.9
Msa0413870 AT4G11070.1 42.529 87 37 5 187 261 127 212 6.05e-11 64.3

Find 120 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCTCCTTCAAATCATTT+TGG 0.095807 3_2:-58788291 Msa0413870:CDS
AAGAGAGGTGTAGGAGAAAT+AGG 0.219713 3_2:+58789678 None:intergenic
GAGATCTTTCGGTGTCTTTA+AGG 0.223046 3_2:+58789775 None:intergenic
TTTCGGTGTCTTTAAGGTTT+TGG 0.266179 3_2:+58789781 None:intergenic
GTGCATTTGTAATAGCTTCT+TGG 0.267267 3_2:+58788468 None:intergenic
TGAAACATTGTTGTTGTTGA+TGG 0.270698 3_2:+58786446 None:intergenic
AGGAGGTGTAGACTTGAATT+TGG 0.275405 3_2:+58789710 None:intergenic
GGATACAGATGGAGGAAATA+TGG 0.277797 3_2:-58787798 Msa0413870:CDS
TTTGGTCGGTTGGAGAATTA+AGG 0.278875 3_2:+58789799 None:intergenic
GGATACAATTGGAGAAAATA+TGG 0.306925 3_2:-58788519 Msa0413870:CDS
TCCTTCCAAGCTCAACCAGC+TGG 0.315203 3_2:-58788999 Msa0413870:CDS
AACAATGTTTCACTTCATAA+TGG 0.317177 3_2:-58786435 Msa0413870:CDS
GGAGGTGTAGACTTGAATTT+GGG 0.318965 3_2:+58789711 None:intergenic
TTGGTTTGTTAAGGTGAAAA+AGG 0.342355 3_2:+58789940 None:intergenic
AAATGAAATTCAAATGGATT+TGG 0.360393 3_2:-58788268 Msa0413870:CDS
ATTGAAGGGTTGGTTTGTTA+AGG 0.368889 3_2:+58789931 None:intergenic
GAGCAGACTTCTCATAAATC+TGG 0.371375 3_2:-58788198 Msa0413870:CDS
TTGAATCTTTCCTATCTTGA+AGG 0.379314 3_2:-58786281 None:intergenic
CTCTTGTTAGCCACAGGCTT+AGG 0.389420 3_2:+58788357 None:intergenic
CTAATAATGAAGGCTTCAAT+TGG 0.393130 3_2:-58789088 Msa0413870:CDS
AAAGTTGAGAGGGGTTTAGA+TGG 0.393749 3_2:-58788420 Msa0413870:CDS
CGTGTTAATAATATTATTAG+AGG 0.394719 3_2:-58786342 Msa0413870:CDS
ACGTTGTTATCACTGCTCTT+AGG 0.396252 3_2:+58786583 None:intergenic
GTTGTTGTTGATGGAATTGT+TGG 0.400906 3_2:+58786455 None:intergenic
GTCTTCCTCGTCGTCGTCAC+TGG 0.404260 3_2:-58788319 Msa0413870:CDS
TGAGAAGAGTTAAGGAGAAC+AGG 0.405323 3_2:+58789594 None:intergenic
TAATATTGCAGGAGAATAGA+AGG 0.406189 3_2:-58787918 Msa0413870:intron
CACTTGATGATGAGATCTTT+CGG 0.406857 3_2:+58789764 None:intergenic
GAAAATGAGGGAATATCATT+AGG 0.411282 3_2:-58787894 Msa0413870:CDS
AAAGAACATTCCTTCAAGAT+AGG 0.411668 3_2:+58786271 None:intergenic
GTGTTCCTCTTGTTAGCCAC+AGG 0.416619 3_2:+58788351 None:intergenic
CATCATCTGATCTTCTACTA+AGG 0.429029 3_2:+58788541 None:intergenic
GGAGGAGGGTGATGAAATGA+AGG 0.434263 3_2:+58789983 None:intergenic
GAATGAGAGAAGGGTGAAGA+AGG 0.438325 3_2:+58789962 None:intergenic
AAATCAATAAATTGAAGGGT+TGG 0.439082 3_2:+58789921 None:intergenic
GTAGGAGAAATAGGAAGAGA+TGG 0.441968 3_2:+58789687 None:intergenic
TTAGCAAATGATCCGGTAGT+TGG 0.442580 3_2:+58789107 None:intergenic
GATACAGATGGAGGAAATAT+GGG 0.445361 3_2:-58787797 Msa0413870:CDS
CCAAAATGATTTGAAGGAGG+AGG 0.450538 3_2:+58788291 None:intergenic
GTTGTTTGAACAACAACTCT+TGG 0.451286 3_2:+58787846 None:intergenic
GATCAGATGATGGATACAAT+TGG 0.451349 3_2:-58788530 Msa0413870:CDS
ATCTTCTACAGGCTCCTCCT+TGG 0.451413 3_2:+58786314 None:intergenic
GGATCATTTGCTAATAATGA+AGG 0.453023 3_2:-58789098 Msa0413870:CDS
AAGTGTTGTCGGATCAAAAC+AGG 0.453220 3_2:-58789746 Msa0413870:CDS
GAAGGAGAAAAGAGAGGTGT+AGG 0.456766 3_2:+58789669 None:intergenic
GAGAATAGAAGGTGAAAATG+AGG 0.457475 3_2:-58787907 Msa0413870:CDS
ATAGTTGTTTGCATTGGTAG+TGG 0.460987 3_2:+58786495 None:intergenic
TCATTTCCAAAATGATTTGA+AGG 0.461658 3_2:+58788285 None:intergenic
GACTTACATGAGAAGAGTTA+AGG 0.463339 3_2:+58789586 None:intergenic
GACATTGATATTCTAGATGA+TGG 0.466100 3_2:-58787819 Msa0413870:CDS
GGTATAGAAAAGTAAGAAGA+AGG 0.468052 3_2:+58789651 None:intergenic
CCTTCCAAGCTCAACCAGCT+GGG 0.469628 3_2:-58788998 Msa0413870:CDS
TTCATTATTAGCAAATGATC+CGG 0.475551 3_2:+58789100 None:intergenic
CCCAGCTGGTTGAGCTTGGA+AGG 0.483118 3_2:+58788998 None:intergenic
GAAACCCAGCTGGTTGAGCT+TGG 0.484107 3_2:+58788994 None:intergenic
GAAGGAGAAACTTGATGAGA+TGG 0.486771 3_2:+58789016 None:intergenic
ATCTCATCATCAAGTGTTGT+CGG 0.493343 3_2:-58789757 Msa0413870:CDS
TATGGGCAGAAAGTAGTAAA+GGG 0.499601 3_2:-58787780 Msa0413870:CDS
CAATTGGAAGAATAATTATG+AGG 0.501111 3_2:-58789072 Msa0413870:CDS
GAGAAGGGTGAAGAAGGAGG+AGG 0.502324 3_2:+58789968 None:intergenic
TTGTCGGATCAAAACAGGTC+GGG 0.503694 3_2:-58789741 Msa0413870:CDS
AGAAGGGTGAAGAAGGAGGA+GGG 0.505648 3_2:+58789969 None:intergenic
AATGGATTTGGTTGCTACAC+CGG 0.505910 3_2:-58788256 Msa0413870:CDS
AGAAAGAGGAGGTCATTGAA+TGG 0.506814 3_2:+58789832 None:intergenic
AAGGAGGTCAGAGAAGAAAG+AGG 0.508130 3_2:+58789818 None:intergenic
GTTCCTGCACCACGTGGAAG+TGG 0.514980 3_2:-58786537 Msa0413870:CDS
TGAGAGAAGGGTGAAGAAGG+AGG 0.515433 3_2:+58789965 None:intergenic
ATATGGGCAGAAAGTAGTAA+AGG 0.520616 3_2:-58787781 Msa0413870:CDS
GATGGAATTGTTGGCACTTG+TGG 0.521173 3_2:+58786464 None:intergenic
GGAGAAATAGGAAGAGATGG+AGG 0.527547 3_2:+58789690 None:intergenic
TTTCCACTTCCACGTGGTGC+AGG 0.529414 3_2:+58786534 None:intergenic
TTGTTCATAGTTGTTTGCAT+TGG 0.537129 3_2:+58786489 None:intergenic
CTACTAAGGATTTGAACTTG+TGG 0.539306 3_2:+58788555 None:intergenic
GTAGTGGTTTGTTGATAGAG+TGG 0.539439 3_2:+58786511 None:intergenic
AGCTCAGAAAGAGAAAAGCC+AGG 0.544999 3_2:+58789627 None:intergenic
CACTGCTCTTAGGTCTTGTG+AGG 0.545249 3_2:+58786593 None:intergenic
AGAATAGAAGGTGAAAATGA+GGG 0.546664 3_2:-58787906 Msa0413870:CDS
TCACTAGTAGAATTACTCTC+TGG 0.547481 3_2:+58788630 None:intergenic
GCAGTGATAACAACGTATGA+AGG 0.549349 3_2:-58786576 Msa0413870:CDS
GAAATAGGAAGAGATGGAGG+AGG 0.551676 3_2:+58789693 None:intergenic
GAGAATTCATCGATATCGAT+TGG 0.558388 3_2:-58788234 Msa0413870:CDS
GAGGGAATATCATTAGGAGC+TGG 0.558610 3_2:-58787888 Msa0413870:CDS
TACTACAAGTGCACAAACCC+AGG 0.561370 3_2:-58786645 Msa0413870:CDS
AATGATCCGGTAGTTGGAGA+TGG 0.563554 3_2:+58789113 None:intergenic
ATCGATATCGATGAATTCTC+CGG 0.566337 3_2:+58788237 None:intergenic
CTTAGTAGAAGATCAGATGA+TGG 0.566844 3_2:-58788540 Msa0413870:CDS
GATGCAGAACAATGGATTCA+CGG 0.571686 3_2:-58786394 Msa0413870:CDS
GTCGAAGATTGAAACCCAGC+TGG 0.571777 3_2:+58788984 None:intergenic
AGCTGGAAATAGAACAGTGA+GGG 0.575113 3_2:-58787871 Msa0413870:CDS
ATTCTTCCATCTCCAACTAC+CGG 0.576159 3_2:-58789119 Msa0413870:CDS
TTTCCAAAATGATTTGAAGG+AGG 0.580319 3_2:+58788288 None:intergenic
CTAGTAGAATTACTCTCTGG+TGG 0.580327 3_2:+58788633 None:intergenic
AGAGAATGTCAAGGCAGAAG+AGG 0.589262 3_2:-58789042 Msa0413870:CDS
TTCTAGATGATGGATACAGA+TGG 0.589347 3_2:-58787809 Msa0413870:CDS
TAAGAAGAAGGAGAAAAGAG+AGG 0.593576 3_2:+58789663 None:intergenic
CAGACTTCTCATAAATCTGG+TGG 0.596367 3_2:-58788195 Msa0413870:CDS
AATGAGATGATGCAGAACAA+TGG 0.599597 3_2:-58786402 Msa0413870:CDS
TAAAGGGAAATCCAAATCCA+AGG 0.599938 3_2:-58787764 Msa0413870:intron
TAGTAGAATTACTCTCTGGT+GGG 0.614330 3_2:+58788634 None:intergenic
GGTCGGTTGGAGAATTAAGG+AGG 0.622030 3_2:+58789802 None:intergenic
CTAAGCCTGTGGCTAACAAG+AGG 0.622068 3_2:-58788356 Msa0413870:CDS
TATTATTAGAGGTAGAGCCA+AGG 0.625277 3_2:-58786331 Msa0413870:CDS
GGTGTAGACTTGAATTTGGG+GGG 0.629490 3_2:+58789714 None:intergenic
GTTTCAATCTTCGACCACCA+CGG 0.629999 3_2:-58788976 Msa0413870:CDS
ATACCAACAGGGATGGAACA+TGG 0.636942 3_2:-58788691 Msa0413870:intron
AGGTGTAGACTTGAATTTGG+GGG 0.639825 3_2:+58789713 None:intergenic
ATTACTGAGATTGTTTACAA+AGG 0.646662 3_2:-58788393 Msa0413870:CDS
TATTAGAGGTAGAGCCAAGG+AGG 0.647426 3_2:-58786328 Msa0413870:CDS
TCATAATCATCCTAAGCCTG+TGG 0.651078 3_2:-58788367 Msa0413870:CDS
ATTTGCCAGTGACGACGACG+AGG 0.651421 3_2:+58788314 None:intergenic
GTTGTCGGATCAAAACAGGT+CGG 0.656679 3_2:-58789742 Msa0413870:CDS
GGAAAAGCAAGAGAATGTCA+AGG 0.656877 3_2:-58789051 Msa0413870:CDS
AGTGAACAAAACAACAAGAG+TGG 0.657175 3_2:-58788612 Msa0413870:CDS
CATGATGTTCCTGCACCACG+TGG 0.664697 3_2:-58786543 Msa0413870:CDS
TAGATGATGGATACAGATGG+AGG 0.677154 3_2:-58787806 Msa0413870:CDS
GAGGTCAGAGAAGAAAGAGG+AGG 0.687171 3_2:+58789821 None:intergenic
GAGGTGTAGACTTGAATTTG+GGG 0.712764 3_2:+58789712 None:intergenic
GAGTGGTTTCCACTTCCACG+TGG 0.715134 3_2:+58786528 None:intergenic
TCAGAAAGAGAAAAGCCAGG+AGG 0.750551 3_2:+58789630 None:intergenic
GAGCTGGAAATAGAACAGTG+AGG 0.774963 3_2:-58787872 Msa0413870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTTATTAATATTGC+AGG - chr3_2:58788342-58788361 Msa0413870:CDS 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr3_2:58788780-58788799 Msa0413870:intron 10.0%
!! GAAAAAATCAATAAATTGAA+GGG + chr3_2:58786357-58786376 None:intergenic 15.0%
!! TGAAAAAATCAATAAATTGA+AGG + chr3_2:58786358-58786377 None:intergenic 15.0%
!! TCAACTATAAAGTATAATTA+AGG + chr3_2:58786769-58786788 None:intergenic 15.0%
!!! AACAATTATGATTCATTTTT+AGG + chr3_2:58786927-58786946 None:intergenic 15.0%
!!! TGAACATTTAATTTTAATCA+TGG - chr3_2:58786958-58786977 Msa0413870:intron 15.0%
!!! TATGTATTTTTCTTTTCATT+TGG - chr3_2:58787508-58787527 Msa0413870:intron 15.0%
!!! TTTTATCATATCACATAAAA+TGG - chr3_2:58788197-58788216 Msa0413870:CDS 15.0%
!! TAATTAGAGTTATATTGTAT+TGG - chr3_2:58788974-58788993 Msa0413870:CDS 15.0%
!! AATTAGAGTTATATTGTATT+GGG - chr3_2:58788975-58788994 Msa0413870:CDS 15.0%
!! CTTGAAAAAAAATTGTATAT+GGG + chr3_2:58789236-58789255 None:intergenic 15.0%
!! TCTTGAAAAAAAATTGTATA+TGG + chr3_2:58789237-58789256 None:intergenic 15.0%
!! TTGTTTACTAAACATAATAT+AGG - chr3_2:58789600-58789619 Msa0413870:CDS 15.0%
!! TATAATTAAGGTGATCAATT+TGG + chr3_2:58786757-58786776 None:intergenic 20.0%
!!! ATCGATTTAATTCTTGTATA+TGG - chr3_2:58786879-58786898 Msa0413870:intron 20.0%
!! ATTTAATTCTTGTATATGGT+TGG - chr3_2:58786883-58786902 Msa0413870:intron 20.0%
!!! ATGAGTTTGATTTTCATATA+TGG + chr3_2:58787050-58787069 None:intergenic 20.0%
!!! TTTTGGAAATGAAATTCAAA+TGG - chr3_2:58787997-58788016 Msa0413870:intron 20.0%
!!! AAATGAAATTCAAATGGATT+TGG - chr3_2:58788003-58788022 Msa0413870:intron 20.0%
!!! AACAACAACTTTTAAAAAGT+TGG + chr3_2:58788582-58788601 None:intergenic 20.0%
!!! TGTTAATTTTGTGTATCTTT+AGG + chr3_2:58789176-58789195 None:intergenic 20.0%
!! ACACAAAATTAACAAAACTA+AGG - chr3_2:58789182-58789201 Msa0413870:intron 20.0%
!!! TTAACAAAACTAAGGTATTT+TGG - chr3_2:58789190-58789209 Msa0413870:intron 20.0%
!! AATGAGTAAAATAAAACTAG+TGG + chr3_2:58789562-58789581 None:intergenic 20.0%
!! CGTGTTAATAATATTATTAG+AGG - chr3_2:58789929-58789948 Msa0413870:five_prime_UTR 20.0%
! AAATCAATAAATTGAAGGGT+TGG + chr3_2:58786353-58786372 None:intergenic 25.0%
!! TTTAAAGTCACATATATGTG+TGG - chr3_2:58786986-58787005 Msa0413870:intron 25.0%
! TTCATTATTAGCAAATGATC+CGG + chr3_2:58787174-58787193 None:intergenic 25.0%
! CAATTGGAAGAATAATTATG+AGG - chr3_2:58787199-58787218 Msa0413870:intron 25.0%
!! TGAGTCTTGTGAATTTAAAT+TGG + chr3_2:58787337-58787356 None:intergenic 25.0%
! TTACCGACAAAAATTAAAGA+CGG - chr3_2:58787394-58787413 Msa0413870:intron 25.0%
!!! TTTCCGTCTTTAATTTTTGT+CGG + chr3_2:58787454-58787473 None:intergenic 25.0%
!!! TTTCCGTCTTTAATTTTTGT+CGG - chr3_2:58787454-58787473 Msa0413870:intron 25.0%
! TTACCGACAAAAATTAAAGA+CGG + chr3_2:58787394-58787413 None:intergenic 25.0%
!! TTTTCTTTGTTGGACAATTA+GGG + chr3_2:58787832-58787851 None:intergenic 25.0%
!! TTTTTCTTTGTTGGACAATT+AGG + chr3_2:58787833-58787852 None:intergenic 25.0%
! AACAAAGAAAAAAGTTGAGA+GGG - chr3_2:58787841-58787860 Msa0413870:CDS 25.0%
! ATTACTGAGATTGTTTACAA+AGG - chr3_2:58787878-58787897 Msa0413870:CDS 25.0%
! TCATTTCCAAAATGATTTGA+AGG + chr3_2:58787989-58788008 None:intergenic 25.0%
!!! AGTAAAAACTCACCATTTTT+TGG + chr3_2:58788137-58788156 None:intergenic 25.0%
!! CCACAATATAACAAATTTTG+AGG + chr3_2:58788254-58788273 None:intergenic 25.0%
!!! CCTCAAAATTTGTTATATTG+TGG - chr3_2:58788251-58788270 Msa0413870:CDS 25.0%
! ATATAAAGTGATCACATTCA+TGG + chr3_2:58788291-58788310 None:intergenic 25.0%
!!! CTTTTTAATTACCTTGGATT+TGG + chr3_2:58788521-58788540 None:intergenic 25.0%
! AAACTACCAAAGCATAAAAA+AGG + chr3_2:58788658-58788677 None:intergenic 25.0%
! TGTATAAATAAAGGAGAAAG+TGG - chr3_2:58788789-58788808 Msa0413870:intron 25.0%
!!! TCAACTAAAGTTGATGTATT+TGG - chr3_2:58788852-58788871 Msa0413870:intron 25.0%
!! TTGATGTATTTGGTTCAAAA+TGG + chr3_2:58788881-58788900 None:intergenic 25.0%
!!! TCAACTAAAGTTGATGTATT+TGG + chr3_2:58788852-58788871 None:intergenic 25.0%
!! TTGAAATGACTCAGTTATTT+TGG - chr3_2:58789021-58789040 Msa0413870:CDS 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG - chr3_2:58789022-58789041 Msa0413870:CDS 25.0%
! ACATTTAAGCAGTTAATTGA+GGG + chr3_2:58789114-58789133 None:intergenic 25.0%
!! TACCATTATAGATCATGTTT+TGG - chr3_2:58789352-58789371 Msa0413870:intron 25.0%
! CAATGTCTAAATATTCTTAC+TGG - chr3_2:58789440-58789459 Msa0413870:intron 25.0%
! ATATTCTTACTGGTCAAATT+TGG - chr3_2:58789450-58789469 Msa0413870:intron 25.0%
!! ATGTGATGTTTAAGACTAAA+GGG - chr3_2:58789532-58789551 Msa0413870:intron 25.0%
! AACAATGTTTCACTTCATAA+TGG - chr3_2:58789836-58789855 Msa0413870:exon 25.0%
!! TTGGTTTGTTAAGGTGAAAA+AGG + chr3_2:58786334-58786353 None:intergenic 30.0%
GGTATAGAAAAGTAAGAAGA+AGG + chr3_2:58786623-58786642 None:intergenic 30.0%
!! TGGTTGTGATTTGTTTAAAG+TGG - chr3_2:58787006-58787025 Msa0413870:intron 30.0%
TATGTCTATGTGATTCTAGT+TGG - chr3_2:58787092-58787111 Msa0413870:intron 30.0%
! GGATCATTTGCTAATAATGA+AGG - chr3_2:58787173-58787192 Msa0413870:intron 30.0%
CTAATAATGAAGGCTTCAAT+TGG - chr3_2:58787183-58787202 Msa0413870:intron 30.0%
! TCGGTAATTCGAGTATTTTT+CGG - chr3_2:58787473-58787492 Msa0413870:intron 30.0%
AAACTTTCATGTATACCAAC+AGG - chr3_2:58787568-58787587 Msa0413870:intron 30.0%
AACTTTCATGTATACCAACA+GGG - chr3_2:58787569-58787588 Msa0413870:intron 30.0%
GGATACAATTGGAGAAAATA+TGG - chr3_2:58787752-58787771 Msa0413870:intron 30.0%
TATGGACAAAAACAAGTGAA+AGG - chr3_2:58787770-58787789 Msa0413870:CDS 30.0%
!!! CTCTCAACTTTTTTCTTTGT+TGG + chr3_2:58787842-58787861 None:intergenic 30.0%
CAACAAAGAAAAAAGTTGAG+AGG - chr3_2:58787840-58787859 Msa0413870:CDS 30.0%
ACAAAGAAAAAAGTTGAGAG+GGG - chr3_2:58787842-58787861 Msa0413870:CDS 30.0%
TTTCCAAAATGATTTGAAGG+AGG + chr3_2:58787986-58788005 None:intergenic 30.0%
ATGAACCTGATTCCAAAAAA+TGG - chr3_2:58788122-58788141 Msa0413870:intron 30.0%
! ACATTCATGGATTTGAAATG+TGG + chr3_2:58788278-58788297 None:intergenic 30.0%
TAATATTGCAGGAGAATAGA+AGG - chr3_2:58788353-58788372 Msa0413870:CDS 30.0%
AGAATAGAAGGTGAAAATGA+GGG - chr3_2:58788365-58788384 Msa0413870:CDS 30.0%
GAAAATGAGGGAATATCATT+AGG - chr3_2:58788377-58788396 Msa0413870:CDS 30.0%
GACATTGATATTCTAGATGA+TGG - chr3_2:58788452-58788471 Msa0413870:CDS 30.0%
!! AGAGTGCTTTTTAATTACCT+TGG + chr3_2:58788527-58788546 None:intergenic 30.0%
GGACATGATTTAATAGTCAA+AGG + chr3_2:58788561-58788580 None:intergenic 30.0%
!!! TTGACTCCTTTTTTATGCTT+TGG - chr3_2:58788649-58788668 Msa0413870:CDS 30.0%
! TCCTTTTTACAAGAGACAAA+TGG - chr3_2:58788828-58788847 Msa0413870:intron 30.0%
! CCTTTTTACAAGAGACAAAT+GGG - chr3_2:58788829-58788848 Msa0413870:intron 30.0%
AGAAAATGAGTCAGATATTC+CGG - chr3_2:58789057-58789076 Msa0413870:CDS 30.0%
CACATTTAAGCAGTTAATTG+AGG + chr3_2:58789115-58789134 None:intergenic 30.0%
CTCAATTAACTGCTTAAATG+TGG - chr3_2:58789113-58789132 Msa0413870:CDS 30.0%
!!! CAAAACTAAGGTATTTTGGT+AGG - chr3_2:58789194-58789213 Msa0413870:intron 30.0%
GTCCAAAACATGATCTATAA+TGG + chr3_2:58789357-58789376 None:intergenic 30.0%
! CAAAAAGTCTTGAGAGTTTT+TGG + chr3_2:58789418-58789437 None:intergenic 30.0%
!! CTTTAGTCTTAAACATCACA+TGG + chr3_2:58789533-58789552 None:intergenic 30.0%
! CATGTGATGTTTAAGACTAA+AGG - chr3_2:58789531-58789550 Msa0413870:intron 30.0%
TTGTTCATAGTTGTTTGCAT+TGG + chr3_2:58789785-58789804 None:intergenic 30.0%
! TGAAACATTGTTGTTGTTGA+TGG + chr3_2:58789828-58789847 None:intergenic 30.0%
AAAAATGAGTCATCTTCTAC+AGG + chr3_2:58789971-58789990 None:intergenic 30.0%
GTGAAAAAGGAATGAGAGAA+GGG + chr3_2:58786321-58786340 None:intergenic 35.0%
!! ATTGAAGGGTTGGTTTGTTA+AGG + chr3_2:58786343-58786362 None:intergenic 35.0%
!!! TTTCGGTGTCTTTAAGGTTT+TGG + chr3_2:58786493-58786512 None:intergenic 35.0%
!! CACTTGATGATGAGATCTTT+CGG + chr3_2:58786510-58786529 None:intergenic 35.0%
! ATCTCATCATCAAGTGTTGT+CGG - chr3_2:58786514-58786533 Msa0413870:CDS 35.0%
TAAGAAGAAGGAGAAAAGAG+AGG + chr3_2:58786611-58786630 None:intergenic 35.0%
!! TCTTACTTTTCTATACCTCC+TGG - chr3_2:58786626-58786645 Msa0413870:CDS 35.0%
GACTTACATGAGAAGAGTTA+AGG + chr3_2:58786688-58786707 None:intergenic 35.0%
! GTTACATACATTTTGAACCG+TGG + chr3_2:58787315-58787334 None:intergenic 35.0%
TAGTAGAATTACTCTCTGGT+GGG + chr3_2:58787640-58787659 None:intergenic 35.0%
TCACTAGTAGAATTACTCTC+TGG + chr3_2:58787644-58787663 None:intergenic 35.0%
AGTGAACAAAACAACAAGAG+TGG - chr3_2:58787659-58787678 Msa0413870:intron 35.0%
CTACTAAGGATTTGAACTTG+TGG + chr3_2:58787719-58787738 None:intergenic 35.0%
CATCATCTGATCTTCTACTA+AGG + chr3_2:58787733-58787752 None:intergenic 35.0%
CTTAGTAGAAGATCAGATGA+TGG - chr3_2:58787731-58787750 Msa0413870:intron 35.0%
!! GATCAGATGATGGATACAAT+TGG - chr3_2:58787741-58787760 Msa0413870:intron 35.0%
GTGCATTTGTAATAGCTTCT+TGG + chr3_2:58787806-58787825 None:intergenic 35.0%
ATCGATATCGATGAATTCTC+CGG + chr3_2:58788037-58788056 None:intergenic 35.0%
GAGAATTCATCGATATCGAT+TGG - chr3_2:58788037-58788056 Msa0413870:intron 35.0%
!!! ACTCACCATTTTTTGGAATC+AGG + chr3_2:58788130-58788149 None:intergenic 35.0%
GAGAATAGAAGGTGAAAATG+AGG - chr3_2:58788364-58788383 Msa0413870:CDS 35.0%
GTTGTTTGAACAACAACTCT+TGG + chr3_2:58788428-58788447 None:intergenic 35.0%
!! TTCTAGATGATGGATACAGA+TGG - chr3_2:58788462-58788481 Msa0413870:CDS 35.0%
GATACAGATGGAGGAAATAT+GGG - chr3_2:58788474-58788493 Msa0413870:CDS 35.0%
ATATGGGCAGAAAGTAGTAA+AGG - chr3_2:58788490-58788509 Msa0413870:CDS 35.0%
TATGGGCAGAAAGTAGTAAA+GGG - chr3_2:58788491-58788510 Msa0413870:CDS 35.0%
TAAAGGGAAATCCAAATCCA+AGG - chr3_2:58788507-58788526 Msa0413870:CDS 35.0%
ATCTGTGTGAAAAACCAAAC+TGG + chr3_2:58788760-58788779 None:intergenic 35.0%
TTGTCTCTTGTAAAAAGGAC+CGG + chr3_2:58788827-58788846 None:intergenic 35.0%
CCCATTTGTCTCTTGTAAAA+AGG + chr3_2:58788832-58788851 None:intergenic 35.0%
GAAAATGAGTCAGATATTCC+GGG - chr3_2:58789058-58789077 Msa0413870:CDS 35.0%
! TTTTGGTAGGTCAAACCTAA+AGG - chr3_2:58789207-58789226 Msa0413870:intron 35.0%
! ATTGTATATGGGTTGCCTTT+AGG + chr3_2:58789225-58789244 None:intergenic 35.0%
CACGTGATAGGTAAAGTATA+GGG + chr3_2:58789382-58789401 None:intergenic 35.0%
TGCATGCATTAGAGAAATGT+GGG + chr3_2:58789479-58789498 None:intergenic 35.0%
ATGCATGCATTAGAGAAATG+TGG + chr3_2:58789480-58789499 None:intergenic 35.0%
ACATTTCTCTAATGCATGCA+TGG - chr3_2:58789479-58789498 Msa0413870:intron 35.0%
CATTTCTCTAATGCATGCAT+GGG - chr3_2:58789480-58789499 Msa0413870:intron 35.0%
! ATAGTTGTTTGCATTGGTAG+TGG + chr3_2:58789779-58789798 None:intergenic 35.0%
! GTTGTTGTTGATGGAATTGT+TGG + chr3_2:58789819-58789838 None:intergenic 35.0%
AATGAGATGATGCAGAACAA+TGG - chr3_2:58789869-58789888 Msa0413870:five_prime_UTR 35.0%
TATTATTAGAGGTAGAGCCA+AGG - chr3_2:58789940-58789959 Msa0413870:five_prime_UTR 35.0%
GGTGAAAAAGGAATGAGAGA+AGG + chr3_2:58786322-58786341 None:intergenic 40.0%
AGAAAGAGGAGGTCATTGAA+TGG + chr3_2:58786442-58786461 None:intergenic 40.0%
TTTGGTCGGTTGGAGAATTA+AGG + chr3_2:58786475-58786494 None:intergenic 40.0%
!!! TCTTTAAGGTTTTGGTCGGT+TGG + chr3_2:58786485-58786504 None:intergenic 40.0%
!!! GGTGTCTTTAAGGTTTTGGT+CGG + chr3_2:58786489-58786508 None:intergenic 40.0%
!! GAGATCTTTCGGTGTCTTTA+AGG + chr3_2:58786499-58786518 None:intergenic 40.0%
! AAGTGTTGTCGGATCAAAAC+AGG - chr3_2:58786525-58786544 Msa0413870:CDS 40.0%
AGGTGTAGACTTGAATTTGG+GGG + chr3_2:58786561-58786580 None:intergenic 40.0%
GAGGTGTAGACTTGAATTTG+GGG + chr3_2:58786562-58786581 None:intergenic 40.0%
! GGAGGTGTAGACTTGAATTT+GGG + chr3_2:58786563-58786582 None:intergenic 40.0%
! AGGAGGTGTAGACTTGAATT+TGG + chr3_2:58786564-58786583 None:intergenic 40.0%
GTAGGAGAAATAGGAAGAGA+TGG + chr3_2:58786587-58786606 None:intergenic 40.0%
! AAGAGAGGTGTAGGAGAAAT+AGG + chr3_2:58786596-58786615 None:intergenic 40.0%
TGAGAAGAGTTAAGGAGAAC+AGG + chr3_2:58786680-58786699 None:intergenic 40.0%
ATTCTTCCATCTCCAACTAC+CGG - chr3_2:58787152-58787171 Msa0413870:intron 40.0%
TTAGCAAATGATCCGGTAGT+TGG + chr3_2:58787167-58787186 None:intergenic 40.0%
GGAAAAGCAAGAGAATGTCA+AGG - chr3_2:58787220-58787239 Msa0413870:intron 40.0%
GAAGGAGAAACTTGATGAGA+TGG + chr3_2:58787258-58787277 None:intergenic 40.0%
! ACATACATTTTGAACCGTGG+TGG + chr3_2:58787312-58787331 None:intergenic 40.0%
TTCATGTATACCAACAGGGA+TGG - chr3_2:58787573-58787592 Msa0413870:intron 40.0%
CTAGTAGAATTACTCTCTGG+TGG + chr3_2:58787641-58787660 None:intergenic 40.0%
AAAGTTGAGAGGGGTTTAGA+TGG - chr3_2:58787851-58787870 Msa0413870:CDS 40.0%
TCATAATCATCCTAAGCCTG+TGG - chr3_2:58787904-58787923 Msa0413870:CDS 40.0%
CCAAAATGATTTGAAGGAGG+AGG + chr3_2:58787983-58788002 None:intergenic 40.0%
! CCTCCTCCTTCAAATCATTT+TGG - chr3_2:58787980-58787999 Msa0413870:intron 40.0%
! AATGGATTTGGTTGCTACAC+CGG - chr3_2:58788015-58788034 Msa0413870:intron 40.0%
GAGCAGACTTCTCATAAATC+TGG - chr3_2:58788073-58788092 Msa0413870:intron 40.0%
CAGACTTCTCATAAATCTGG+TGG - chr3_2:58788076-58788095 Msa0413870:intron 40.0%
AGCTGGAAATAGAACAGTGA+GGG - chr3_2:58788400-58788419 Msa0413870:CDS 40.0%
!! TAGATGATGGATACAGATGG+AGG - chr3_2:58788465-58788484 Msa0413870:CDS 40.0%
GGATACAGATGGAGGAAATA+TGG - chr3_2:58788473-58788492 Msa0413870:CDS 40.0%
! CAAACTGGCTCAGATAAAAC+GGG + chr3_2:58788745-58788764 None:intergenic 40.0%
! CCAAACTGGCTCAGATAAAA+CGG + chr3_2:58788746-58788765 None:intergenic 40.0%
AAAGTGGAATATACTCCCTC+CGG - chr3_2:58788805-58788824 Msa0413870:intron 40.0%
TTAGTTGACCCATTTGTCTC+CGG - chr3_2:58788903-58788922 Msa0413870:intron 40.0%
! CCTTTTTACCGGAGACAAAT+GGG + chr3_2:58788914-58788933 None:intergenic 40.0%
! TCCTTTTTACCGGAGACAAA+TGG + chr3_2:58788915-58788934 None:intergenic 40.0%
GTGATAGGTAAAGTATAGGG+TGG + chr3_2:58789379-58789398 None:intergenic 40.0%
GCACGTGATAGGTAAAGTAT+AGG + chr3_2:58789383-58789402 None:intergenic 40.0%
CTATTTCAACTGCACGTGAT+AGG + chr3_2:58789394-58789413 None:intergenic 40.0%
ACGTTGTTATCACTGCTCTT+AGG + chr3_2:58789691-58789710 None:intergenic 40.0%
GCAGTGATAACAACGTATGA+AGG - chr3_2:58789695-58789714 Msa0413870:CDS 40.0%
!! GTAGTGGTTTGTTGATAGAG+TGG + chr3_2:58789763-58789782 None:intergenic 40.0%
! GATGCAGAACAATGGATTCA+CGG - chr3_2:58789877-58789896 Msa0413870:five_prime_UTR 40.0%
GAATGAGAGAAGGGTGAAGA+AGG + chr3_2:58786312-58786331 None:intergenic 45.0%
AAGGAGGTCAGAGAAGAAAG+AGG + chr3_2:58786456-58786475 None:intergenic 45.0%
GTTGTCGGATCAAAACAGGT+CGG - chr3_2:58786529-58786548 Msa0413870:CDS 45.0%
TTGTCGGATCAAAACAGGTC+GGG - chr3_2:58786530-58786549 Msa0413870:CDS 45.0%
GGTGTAGACTTGAATTTGGG+GGG + chr3_2:58786560-58786579 None:intergenic 45.0%
GAAATAGGAAGAGATGGAGG+AGG + chr3_2:58786581-58786600 None:intergenic 45.0%
GGAGAAATAGGAAGAGATGG+AGG + chr3_2:58786584-58786603 None:intergenic 45.0%
! GAAGGAGAAAAGAGAGGTGT+AGG + chr3_2:58786605-58786624 None:intergenic 45.0%
TCAGAAAGAGAAAAGCCAGG+AGG + chr3_2:58786644-58786663 None:intergenic 45.0%
AGCTCAGAAAGAGAAAAGCC+AGG + chr3_2:58786647-58786666 None:intergenic 45.0%
AATGATCCGGTAGTTGGAGA+TGG + chr3_2:58787161-58787180 None:intergenic 45.0%
AGAGAATGTCAAGGCAGAAG+AGG - chr3_2:58787229-58787248 Msa0413870:intron 45.0%
GTTTCAATCTTCGACCACCA+CGG - chr3_2:58787295-58787314 Msa0413870:intron 45.0%
ATACCAACAGGGATGGAACA+TGG - chr3_2:58787580-58787599 Msa0413870:intron 45.0%
GAGGGAATATCATTAGGAGC+TGG - chr3_2:58788383-58788402 Msa0413870:CDS 45.0%
GAGCTGGAAATAGAACAGTG+AGG - chr3_2:58788399-58788418 Msa0413870:CDS 45.0%
GCTCAGATAAAACGGGAAAG+AGG + chr3_2:58788738-58788757 None:intergenic 45.0%
! CCGTTTTATCTGAGCCAGTT+TGG - chr3_2:58788743-58788762 Msa0413870:intron 45.0%
CTCTTGTAAAAAGGACCGGA+GGG + chr3_2:58788823-58788842 None:intergenic 45.0%
TCTCTTGTAAAAAGGACCGG+AGG + chr3_2:58788824-58788843 None:intergenic 45.0%
CCCATTTGTCTCCGGTAAAA+AGG - chr3_2:58788911-58788930 Msa0413870:intron 45.0%
TTGTCTCCGGTAAAAAGGAC+CGG - chr3_2:58788916-58788935 Msa0413870:intron 45.0%
!! ACCGGAGGGAGTATTGTATT+GGG - chr3_2:58788934-58788953 Msa0413870:intron 45.0%
TCCCAATACAATACTCCCTC+CGG + chr3_2:58788938-58788957 None:intergenic 45.0%
ATGAGTCAGATATTCCGGGA+CGG - chr3_2:58789062-58789081 Msa0413870:CDS 45.0%
TACTACAAGTGCACAAACCC+AGG - chr3_2:58789626-58789645 Msa0413870:CDS 45.0%
! GTTTTCTCACTGGACATCCT+GGG + chr3_2:58789646-58789665 None:intergenic 45.0%
! TGTTTTCTCACTGGACATCC+TGG + chr3_2:58789647-58789666 None:intergenic 45.0%
! CGTTCGACATGTTTTCTCAC+TGG + chr3_2:58789656-58789675 None:intergenic 45.0%
GATGGAATTGTTGGCACTTG+TGG + chr3_2:58789810-58789829 None:intergenic 45.0%
TATTAGAGGTAGAGCCAAGG+AGG - chr3_2:58789943-58789962 Msa0413870:five_prime_UTR 45.0%
GGAGGAGGGTGATGAAATGA+AGG + chr3_2:58786291-58786310 None:intergenic 50.0%
AGAAGGGTGAAGAAGGAGGA+GGG + chr3_2:58786305-58786324 None:intergenic 50.0%
TGAGAGAAGGGTGAAGAAGG+AGG + chr3_2:58786309-58786328 None:intergenic 50.0%
GAGGTCAGAGAAGAAAGAGG+AGG + chr3_2:58786453-58786472 None:intergenic 50.0%
GGTCGGTTGGAGAATTAAGG+AGG + chr3_2:58786472-58786491 None:intergenic 50.0%
GTCGAAGATTGAAACCCAGC+TGG + chr3_2:58787290-58787309 None:intergenic 50.0%
TCACCATGTTCCATCCCTGT+TGG + chr3_2:58787586-58787605 None:intergenic 50.0%
CTCTTGTTAGCCACAGGCTT+AGG + chr3_2:58787917-58787936 None:intergenic 50.0%
CTAAGCCTGTGGCTAACAAG+AGG - chr3_2:58787915-58787934 Msa0413870:intron 50.0%
GTGTTCCTCTTGTTAGCCAC+AGG + chr3_2:58787923-58787942 None:intergenic 50.0%
!! GACCGGAGGGAGTATTGTAT+TGG - chr3_2:58788933-58788952 Msa0413870:intron 50.0%
! CACTGCTCTTAGGTCTTGTG+AGG + chr3_2:58789681-58789700 None:intergenic 50.0%
ATCTTCTACAGGCTCCTCCT+TGG + chr3_2:58789960-58789979 None:intergenic 50.0%
GAGAAGGGTGAAGAAGGAGG+AGG + chr3_2:58786306-58786325 None:intergenic 55.0%
TCCTTCCAAGCTCAACCAGC+TGG - chr3_2:58787272-58787291 Msa0413870:intron 55.0%
CCTTCCAAGCTCAACCAGCT+GGG - chr3_2:58787273-58787292 Msa0413870:intron 55.0%
GAAACCCAGCTGGTTGAGCT+TGG + chr3_2:58787280-58787299 None:intergenic 55.0%
ATTTGCCAGTGACGACGACG+AGG + chr3_2:58787960-58787979 None:intergenic 55.0%
TCTCCGGTAAAAAGGACCGG+AGG - chr3_2:58788919-58788938 Msa0413870:intron 55.0%
CTCCGGTAAAAAGGACCGGA+GGG - chr3_2:58788920-58788939 Msa0413870:intron 55.0%
! CTCCCTCCGGTCCTTTTTAC+CGG + chr3_2:58788818-58788837 None:intergenic 55.0%
GTCAGATATTCCGGGACGGA+TGG - chr3_2:58789066-58789085 Msa0413870:CDS 55.0%
CATGATGTTCCTGCACCACG+TGG - chr3_2:58789728-58789747 Msa0413870:CDS 55.0%
TTTCCACTTCCACGTGGTGC+AGG + chr3_2:58789740-58789759 None:intergenic 55.0%
GAGTGGTTTCCACTTCCACG+TGG + chr3_2:58789746-58789765 None:intergenic 55.0%
CCCAGCTGGTTGAGCTTGGA+AGG + chr3_2:58787276-58787295 None:intergenic 60.0%
GTCTTCCTCGTCGTCGTCAC+TGG - chr3_2:58787952-58787971 Msa0413870:intron 60.0%
TCCGGGACGGATGGAGTAGT+AGG - chr3_2:58789075-58789094 Msa0413870:CDS 60.0%
GCCTACTACTCCATCCGTCC+CGG + chr3_2:58789079-58789098 None:intergenic 60.0%
GTTCCTGCACCACGTGGAAG+TGG - chr3_2:58789734-58789753 Msa0413870:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 58786284 58790009 58786284 ID=Msa0413870;Name=Msa0413870
chr3_2 mRNA 58786284 58790009 58786284 ID=Msa0413870-mRNA-1;Parent=Msa0413870;Name=Msa0413870-mRNA-1;_AED=0.02;_eAED=0.02;_QI=162|1|0.8|1|1|1|5|0|511
chr3_2 exon 58786284 58786671 58786284 ID=Msa0413870-mRNA-1:exon:12189;Parent=Msa0413870-mRNA-1
chr3_2 exon 58787765 58787929 58787765 ID=Msa0413870-mRNA-1:exon:12188;Parent=Msa0413870-mRNA-1
chr3_2 exon 58788150 58788703 58788150 ID=Msa0413870-mRNA-1:exon:12187;Parent=Msa0413870-mRNA-1
chr3_2 exon 58788968 58789141 58788968 ID=Msa0413870-mRNA-1:exon:12186;Parent=Msa0413870-mRNA-1
chr3_2 exon 58789593 58790009 58789593 ID=Msa0413870-mRNA-1:exon:12185;Parent=Msa0413870-mRNA-1
chr3_2 five_prime_UTR 58789848 58790009 58789848 ID=Msa0413870-mRNA-1:five_prime_utr;Parent=Msa0413870-mRNA-1
chr3_2 CDS 58789593 58789847 58789593 ID=Msa0413870-mRNA-1:cds;Parent=Msa0413870-mRNA-1
chr3_2 CDS 58788968 58789141 58788968 ID=Msa0413870-mRNA-1:cds;Parent=Msa0413870-mRNA-1
chr3_2 CDS 58788150 58788703 58788150 ID=Msa0413870-mRNA-1:cds;Parent=Msa0413870-mRNA-1
chr3_2 CDS 58787765 58787929 58787765 ID=Msa0413870-mRNA-1:cds;Parent=Msa0413870-mRNA-1
chr3_2 CDS 58786284 58786671 58786284 ID=Msa0413870-mRNA-1:cds;Parent=Msa0413870-mRNA-1
Gene Sequence

>Msa0413870

ATGACCTCCTCTTTCTTCTCTGACCTCCTTAATTCTCCAACCGACCAAAACCTTAAAGACACCGAAAGATCTCATCATCAAGTGTTGTCGGATCAAAACAGGTCGGGTTTACCCCCCAAATTCAAGTCTACACCTCCTCCATCTCTTCCTATTTCTCCTACACCTCTCTTTTCTCCTTCTTCTTACTTTTCTATACCTCCTGGCTTTTCTCTTTCTGAGCTTCTTGACTCTCCTGTTCTCCTTAACTCTTCTCATATTCTTCCATCTCCAACTACCGGATCATTTGCTAATAATGAAGGCTTCAATTGGAAGAATAATTATGAGGAAAAGCAAGAGAATGTCAAGGCAGAAGAGGAAACCATCTCATCAAGTTTCTCCTTCCAAGCTCAACCAGCTGGGTTTCAATCTTCGACCACCACGGTTCAAAATGGATGGAACATGGTGAAAACTGAAAACTCTTCTTCAATGCAAAGTTTCCCACCAGAGAGTAATTCTACTAGTGAACAAAACAACAAGAGTGGTTCACAATCAAATTACAACAATTATCAATCACAGCCACAAGTTCAAATCCTTAGTAGAAGATCAGATGATGGATACAATTGGAGAAAATATGGACAAAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGCTATTACAAATGCACATACCCTAATTGTCCAACAAAGAAAAAAGTTGAGAGGGGTTTAGATGGACAAATTACTGAGATTGTTTACAAAGGTAGTCATAATCATCCTAAGCCTGTGGCTAACAAGAGGAACACAAACTCGTTGTCTTCCTCGTCGTCGTCACTGGCAAATCCTCCTCCTTCAAATCATTTTGGAAATGAAATTCAAATGGATTTGGTTGCTACACCGGAGAATTCATCGATATCGATTGGTGATGATGAATTTGAGCAGACTTCTCATAAATCTGGTGGAGATCATGATCAGTTTTGTGAAGATGAACCTGATTCCAAAAAATGGAGAATAGAAGGTGAAAATGAGGGAATATCATTAGGAGCTGGAAATAGAACAGTGAGGGAACCAAGAGTTGTTGTTCAAACAACAAGTGACATTGATATTCTAGATGATGGATACAGATGGAGGAAATATGGGCAGAAAGTAGTAAAGGGAAATCCAAATCCAAGGAGTTACTACAAGTGCACAAACCCAGGATGTCCAGTGAGAAAACATGTCGAACGAGCCTCACAAGACCTAAGAGCAGTGATAACAACGTATGAAGGAAAACACAATCATGATGTTCCTGCACCACGTGGAAGTGGAAACCACTCTATCAACAAACCACTACCAATGCAAACAACTATGAACAATACCACAAGTGCCAACAATTCCATCAACAACAACAATGTTTCACTTCATAATGGATTCTTCAACAATGAGATGATGCAGAACAATGGATTCACGGTTGATTCTTACATGAATATGAATCAACAACGTGTTAATAATATTATTAGAGGTAGAGCCAAGGAGGAGCCTGTAGAAGATGACTCATTTTTTGAATCTTTCCTATCTTGA

Protein sequence

>Msa0413870

MTSSFFSDLLNSPTDQNLKDTERSHHQVLSDQNRSGLPPKFKSTPPPSLPISPTPLFSPSSYFSIPPGFSLSELLDSPVLLNSSHILPSPTTGSFANNEGFNWKNNYEEKQENVKAEEETISSSFSFQAQPAGFQSSTTTVQNGWNMVKTENSSSMQSFPPESNSTSEQNNKSGSQSNYNNYQSQPQVQILSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERGLDGQITEIVYKGSHNHPKPVANKRNTNSLSSSSSSLANPPPSNHFGNEIQMDLVATPENSSISIGDDEFEQTSHKSGGDHDQFCEDEPDSKKWRIEGENEGISLGAGNRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASQDLRAVITTYEGKHNHDVPAPRGSGNHSINKPLPMQTTMNNTTSANNSINNNNVSLHNGFFNNEMMQNNGFTVDSYMNMNQQRVNNIIRGRAKEEPVEDDSFFESFLS*