Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0413870 | AKM20827.1 | 97.852 | 512 | 9 | 2 | 1 | 511 | 1 | 511 | 0.0 | 1026 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0413870 | sp|Q6B6R4|WRK24_ORYSI | 56.171 | 397 | 131 | 11 | 62 | 427 | 65 | 449 | 1.20e-131 | 396 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0413870 | A0A0G3Y2B1 | 97.852 | 512 | 9 | 2 | 1 | 511 | 1 | 511 | 0.0 | 1026 |
Gene ID | Type | Classification |
---|---|---|
Msa0413870 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001830 | Msa0413870 | 0.804479 | 2.118057e-49 | -8.615850e-47 |
Msa0004480 | Msa0413870 | 0.825105 | 5.618958e-54 | -8.615850e-47 |
Msa0006060 | Msa0413870 | 0.839731 | 1.329568e-57 | -8.615850e-47 |
Msa0090380 | Msa0413870 | 0.828751 | 7.551753e-55 | -8.615850e-47 |
Msa0137860 | Msa0413870 | 0.830252 | 3.260145e-55 | -8.615850e-47 |
Msa0138900 | Msa0413870 | 0.812972 | 3.238787e-51 | -8.615850e-47 |
Msa0187310 | Msa0413870 | 0.811285 | 7.559085e-51 | -8.615850e-47 |
Msa0196880 | Msa0413870 | 0.885249 | 9.571182e-72 | -8.615850e-47 |
Msa0223140 | Msa0413870 | 0.833870 | 4.158939e-56 | -8.615850e-47 |
Msa0224130 | Msa0413870 | 0.819842 | 9.389347e-53 | -8.615850e-47 |
Msa0227360 | Msa0413870 | 0.808846 | 2.533711e-50 | -8.615850e-47 |
Msa0233970 | Msa0413870 | 0.808418 | 3.127174e-50 | -8.615850e-47 |
Msa0238710 | Msa0413870 | 0.825990 | 3.467642e-54 | -8.615850e-47 |
Msa0364790 | Msa0413870 | 0.827619 | 1.415191e-54 | -8.615850e-47 |
Msa0365950 | Msa0413870 | 0.914476 | 1.833914e-84 | -8.615850e-47 |
Msa0376970 | Msa0413870 | 0.806907 | 6.549480e-50 | -8.615850e-47 |
Msa0388730 | Msa0413870 | 0.802067 | 6.688114e-49 | -8.615850e-47 |
Msa0412260 | Msa0413870 | 0.823197 | 1.576547e-53 | -8.615850e-47 |
Msa0413870 | Msa0456770 | 0.834516 | 2.865299e-56 | -8.615850e-47 |
Msa0413870 | Msa0458940 | 0.947307 | 8.674743e-106 | -8.615850e-47 |
Msa0413870 | Msa0534870 | 0.810871 | 9.291798e-51 | -8.615850e-47 |
Msa0413870 | Msa0584580 | 0.819128 | 1.366479e-52 | -8.615850e-47 |
Msa0413870 | Msa0584600 | 0.808611 | 2.844510e-50 | -8.615850e-47 |
Msa0413870 | Msa0588670 | 0.810178 | 1.311774e-50 | -8.615850e-47 |
Msa0413870 | Msa0600590 | 0.800886 | 1.167593e-48 | -8.615850e-47 |
Msa0413870 | Msa0631320 | 0.815604 | 8.489678e-52 | -8.615850e-47 |
Msa0413870 | Msa0669700 | 0.824330 | 8.556520e-54 | -8.615850e-47 |
Msa0413870 | Msa0679670 | 0.839814 | 1.265011e-57 | -8.615850e-47 |
Msa0413870 | Msa0713060 | 0.829144 | 6.065185e-55 | -8.615850e-47 |
Msa0413870 | Msa0734940 | 0.825440 | 4.683581e-54 | -8.615850e-47 |
Msa0413870 | Msa0764030 | 0.840909 | 6.546668e-58 | -8.615850e-47 |
Msa0413870 | Msa0769720 | 0.829219 | 5.819565e-55 | -8.615850e-47 |
Msa0413870 | Msa0795730 | 0.841839 | 3.724089e-58 | -8.615850e-47 |
Msa0413870 | Msa0807670 | 0.823026 | 1.728251e-53 | -8.615850e-47 |
Msa0413870 | Msa0807680 | 0.829205 | 5.862757e-55 | -8.615850e-47 |
Msa0413870 | Msa0812530 | 0.823368 | 1.438016e-53 | -8.615850e-47 |
Msa0413870 | Msa0833470 | 0.810453 | 1.144293e-50 | -8.615850e-47 |
Msa0413870 | Msa0852790 | 0.806289 | 8.842932e-50 | -8.615850e-47 |
Msa0413870 | Msa0853440 | 0.802498 | 5.453692e-49 | -8.615850e-47 |
Msa0413870 | Msa0930740 | 0.803815 | 2.911954e-49 | -8.615850e-47 |
Msa0413870 | Msa0945130 | 0.833633 | 4.766816e-56 | -8.615850e-47 |
Msa0413870 | Msa0996380 | 0.800129 | 1.665635e-48 | -8.615850e-47 |
Msa0413870 | Msa1015880 | 0.803090 | 4.115554e-49 | -8.615850e-47 |
Msa0413870 | Msa1016960 | 0.832622 | 8.510368e-56 | -8.615850e-47 |
Msa0413870 | Msa1023310 | 0.836765 | 7.723481e-57 | -8.615850e-47 |
Msa0413870 | Msa1058200 | 0.825237 | 5.230623e-54 | -8.615850e-47 |
Msa0413870 | Msa1059670 | 0.836176 | 1.091011e-56 | -8.615850e-47 |
Msa0413870 | Msa1062040 | 0.841338 | 5.050070e-58 | -8.615850e-47 |
Msa0413870 | Msa1089190 | 0.806800 | 6.897987e-50 | -8.615850e-47 |
Msa0413870 | Msa1098940 | 0.802313 | 5.953339e-49 | -8.615850e-47 |
Msa0413870 | Msa1107200 | 0.837572 | 4.802300e-57 | -8.615850e-47 |
Msa0413870 | Msa1109810 | 0.814801 | 1.280157e-51 | -8.615850e-47 |
Msa0413870 | Msa1150780 | 0.834060 | 3.728715e-56 | -8.615850e-47 |
Msa0413870 | Msa1180720 | 0.884795 | 1.413430e-71 | -8.615850e-47 |
Msa0413870 | Msa1181060 | 0.804598 | 2.000894e-49 | -8.615850e-47 |
Msa0413870 | Msa1183140 | 0.819189 | 1.323326e-52 | -8.615850e-47 |
Msa0413870 | Msa1218160 | 0.840144 | 1.037684e-57 | -8.615850e-47 |
Msa0413870 | Msa1225580 | 0.857321 | 1.767963e-62 | -8.615850e-47 |
Msa0413870 | Msa1231710 | 0.849652 | 2.818403e-60 | -8.615850e-47 |
Msa0413870 | Msa1246790 | 0.810760 | 9.819659e-51 | -8.615850e-47 |
Msa0413870 | Msa1252810 | 0.836172 | 1.093685e-56 | -8.615850e-47 |
Msa0413870 | Msa1274380 | 0.871893 | 4.830101e-67 | -8.615850e-47 |
Msa0413870 | Msa1286220 | 0.817677 | 2.912510e-52 | -8.615850e-47 |
Msa0413870 | Msa1309760 | 0.832098 | 1.147241e-55 | -8.615850e-47 |
Msa0413870 | Msa1312440 | 0.865940 | 4.100633e-65 | -8.615850e-47 |
Msa0413870 | Msa1334840 | 0.801708 | 7.925452e-49 | -8.615850e-47 |
Msa0413870 | Msa1352660 | 0.826521 | 2.591361e-54 | -8.615850e-47 |
Msa0413870 | Msa1355510 | 0.851117 | 1.093854e-60 | -8.615850e-47 |
Msa0413870 | Msa1364080 | 0.810533 | 1.099691e-50 | -8.615850e-47 |
Msa0413870 | Msa1370810 | 0.806010 | 1.012265e-49 | -8.615850e-47 |
Msa0413870 | Msa1386000 | 0.803853 | 2.858799e-49 | -8.615850e-47 |
Msa0413870 | Msa1403690 | 0.805750 | 1.148206e-49 | -8.615850e-47 |
Msa0413870 | Msa1433410 | 0.827046 | 1.941967e-54 | -8.615850e-47 |
Msa0413870 | Msa1435320 | 0.800337 | 1.511116e-48 | -8.615850e-47 |
Msa0413870 | Msa1443620 | 0.814622 | 1.402758e-51 | -8.615850e-47 |
Msa0413870 | Msa1443640 | 0.810202 | 1.296236e-50 | -8.615850e-47 |
Msa0264680 | Msa0413870 | 0.850808 | 1.336008e-60 | -8.615850e-47 |
Msa0265270 | Msa0413870 | 0.818084 | 2.356950e-52 | -8.615850e-47 |
Msa0272400 | Msa0413870 | 0.808679 | 2.751273e-50 | -8.615850e-47 |
Msa0276430 | Msa0413870 | 0.899035 | 2.950056e-77 | -8.615850e-47 |
Msa0302510 | Msa0413870 | 0.810602 | 1.062438e-50 | -8.615850e-47 |
Msa0302730 | Msa0413870 | 0.856616 | 2.851991e-62 | -8.615850e-47 |
Msa0302840 | Msa0413870 | 0.802844 | 4.625590e-49 | -8.615850e-47 |
Msa0306310 | Msa0413870 | 0.800626 | 1.319310e-48 | -8.615850e-47 |
Msa0312590 | Msa0413870 | 0.806176 | 9.342546e-50 | -8.615850e-47 |
Msa0316470 | Msa0413870 | 0.898110 | 7.315234e-77 | -8.615850e-47 |
Msa0339720 | Msa0413870 | 0.828480 | 8.783305e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0413870 | MtrunA17_Chr3g0106491 | 92.982 | 513 | 29 | 2 | 1 | 511 | 1 | 508 | 0.0 | 918 |
Msa0413870 | MtrunA17_Chr5g0432161 | 56.966 | 567 | 167 | 18 | 1 | 510 | 35 | 581 | 1.13e-163 | 476 |
Msa0413870 | MtrunA17_Chr7g0243891 | 47.818 | 527 | 200 | 21 | 39 | 511 | 37 | 542 | 1.04e-125 | 378 |
Msa0413870 | MtrunA17_Chr4g0004911 | 46.089 | 473 | 202 | 14 | 61 | 510 | 47 | 489 | 3.25e-106 | 326 |
Msa0413870 | MtrunA17_Chr5g0445311 | 44.313 | 422 | 180 | 11 | 40 | 427 | 28 | 428 | 3.38e-94 | 296 |
Msa0413870 | MtrunA17_Chr5g0445311 | 49.351 | 77 | 36 | 2 | 363 | 439 | 200 | 273 | 8.90e-14 | 73.9 |
Msa0413870 | MtrunA17_Chr3g0101131 | 43.439 | 442 | 183 | 13 | 40 | 425 | 47 | 477 | 5.55e-92 | 292 |
Msa0413870 | MtrunA17_Chr3g0101131 | 40.650 | 123 | 63 | 4 | 183 | 300 | 406 | 523 | 5.66e-17 | 84.0 |
Msa0413870 | MtrunA17_Chr5g0418191 | 50.719 | 278 | 128 | 5 | 185 | 457 | 140 | 413 | 2.64e-82 | 262 |
Msa0413870 | MtrunA17_Chr7g0218081 | 40.144 | 416 | 192 | 10 | 41 | 431 | 95 | 478 | 1.36e-80 | 260 |
Msa0413870 | MtrunA17_Chr7g0218081 | 47.727 | 88 | 41 | 2 | 183 | 269 | 401 | 484 | 1.20e-15 | 79.7 |
Msa0413870 | MtrunA17_Chr7g0218081 | 44.340 | 106 | 43 | 3 | 363 | 466 | 228 | 319 | 1.67e-15 | 79.0 |
Msa0413870 | MtrunA17_Chr4g0042831 | 52.542 | 236 | 76 | 6 | 191 | 425 | 140 | 340 | 6.37e-73 | 236 |
Msa0413870 | MtrunA17_Chr7g0263531 | 51.064 | 235 | 110 | 2 | 193 | 422 | 186 | 420 | 1.52e-72 | 237 |
Msa0413870 | MtrunA17_Chr7g0263531 | 50.000 | 76 | 37 | 1 | 197 | 271 | 362 | 437 | 1.40e-15 | 79.0 |
Msa0413870 | MtrunA17_Chr5g0447701 | 41.111 | 270 | 131 | 5 | 183 | 442 | 80 | 331 | 1.69e-58 | 198 |
Msa0413870 | MtrunA17_Chr3g0079691 | 62.319 | 138 | 49 | 1 | 290 | 427 | 425 | 559 | 1.56e-47 | 175 |
Msa0413870 | MtrunA17_Chr3g0079691 | 42.437 | 238 | 95 | 8 | 60 | 259 | 110 | 343 | 2.79e-38 | 149 |
Msa0413870 | MtrunA17_Chr3g0079691 | 54.430 | 79 | 34 | 2 | 363 | 440 | 280 | 357 | 6.65e-16 | 80.9 |
Msa0413870 | MtrunA17_Chr3g0079691 | 44.340 | 106 | 48 | 4 | 183 | 285 | 486 | 583 | 1.10e-15 | 80.1 |
Msa0413870 | MtrunA17_Chr4g0074001 | 40.329 | 243 | 127 | 5 | 195 | 425 | 185 | 421 | 9.81e-46 | 167 |
Msa0413870 | MtrunA17_Chr4g0074001 | 53.731 | 67 | 30 | 1 | 195 | 260 | 358 | 424 | 2.23e-16 | 82.0 |
Msa0413870 | MtrunA17_Chr7g0249311 | 48.128 | 187 | 80 | 3 | 321 | 491 | 350 | 535 | 3.23e-43 | 162 |
Msa0413870 | MtrunA17_Chr7g0249311 | 70.000 | 70 | 21 | 0 | 192 | 261 | 175 | 244 | 1.08e-26 | 114 |
Msa0413870 | MtrunA17_Chr7g0249311 | 36.601 | 153 | 73 | 6 | 279 | 427 | 112 | 244 | 3.89e-15 | 78.2 |
Msa0413870 | MtrunA17_Chr7g0249301 | 79.268 | 82 | 17 | 0 | 344 | 425 | 273 | 354 | 1.16e-41 | 153 |
Msa0413870 | MtrunA17_Chr7g0249301 | 67.692 | 65 | 21 | 0 | 197 | 261 | 63 | 127 | 2.81e-23 | 101 |
Msa0413870 | MtrunA17_Chr7g0249301 | 39.683 | 126 | 51 | 4 | 330 | 454 | 45 | 146 | 3.04e-15 | 77.4 |
Msa0413870 | MtrunA17_Chr7g0249301 | 50.667 | 75 | 32 | 2 | 183 | 256 | 283 | 353 | 3.39e-15 | 77.4 |
Msa0413870 | MtrunA17_Chr5g0447711 | 32.174 | 230 | 136 | 4 | 197 | 426 | 84 | 293 | 2.36e-35 | 134 |
Msa0413870 | MtrunA17_Chr1g0188941 | 62.791 | 86 | 32 | 0 | 339 | 424 | 27 | 112 | 1.90e-34 | 125 |
Msa0413870 | MtrunA17_Chr1g0188941 | 56.667 | 60 | 25 | 1 | 196 | 254 | 51 | 110 | 4.33e-17 | 77.4 |
Msa0413870 | MtrunA17_Chr8g0335811 | 67.105 | 76 | 25 | 0 | 344 | 419 | 135 | 210 | 3.20e-31 | 120 |
Msa0413870 | MtrunA17_Chr8g0335811 | 52.113 | 71 | 29 | 2 | 182 | 251 | 144 | 210 | 1.41e-16 | 79.0 |
Msa0413870 | MtrunA17_Chr5g0432071 | 47.857 | 140 | 57 | 4 | 170 | 299 | 78 | 211 | 2.82e-30 | 117 |
Msa0413870 | MtrunA17_Chr5g0432071 | 48.148 | 81 | 38 | 2 | 363 | 440 | 104 | 183 | 9.22e-16 | 76.3 |
Msa0413870 | MtrunA17_Chr3g0129361 | 64.865 | 74 | 26 | 0 | 346 | 419 | 127 | 200 | 3.71e-29 | 114 |
Msa0413870 | MtrunA17_Chr3g0129361 | 47.887 | 71 | 32 | 2 | 182 | 251 | 134 | 200 | 1.09e-14 | 73.6 |
Msa0413870 | MtrunA17_Chr8g0383351 | 64.000 | 75 | 26 | 1 | 346 | 419 | 142 | 216 | 1.10e-27 | 110 |
Msa0413870 | MtrunA17_Chr8g0383351 | 56.140 | 57 | 24 | 1 | 196 | 251 | 160 | 216 | 8.73e-15 | 73.9 |
Msa0413870 | MtrunA17_Chr2g0294231 | 62.338 | 77 | 29 | 0 | 347 | 423 | 187 | 263 | 1.11e-26 | 111 |
Msa0413870 | MtrunA17_Chr2g0294231 | 46.512 | 86 | 45 | 1 | 196 | 280 | 203 | 288 | 1.57e-16 | 81.3 |
Msa0413870 | MtrunA17_Chr1g0150801 | 61.842 | 76 | 28 | 1 | 344 | 419 | 84 | 158 | 1.67e-26 | 105 |
Msa0413870 | MtrunA17_Chr1g0150801 | 47.222 | 72 | 33 | 2 | 182 | 252 | 92 | 159 | 8.00e-16 | 75.1 |
Msa0413870 | MtrunA17_Chr7g0270191 | 49.091 | 110 | 50 | 2 | 347 | 452 | 129 | 236 | 2.52e-26 | 108 |
Msa0413870 | MtrunA17_Chr7g0270191 | 49.383 | 81 | 36 | 2 | 196 | 275 | 145 | 221 | 4.49e-16 | 79.0 |
Msa0413870 | MtrunA17_Chr5g0418781 | 57.647 | 85 | 35 | 1 | 342 | 425 | 103 | 187 | 2.58e-26 | 108 |
Msa0413870 | MtrunA17_Chr5g0418781 | 40.196 | 102 | 56 | 2 | 151 | 251 | 83 | 180 | 1.34e-13 | 71.2 |
Msa0413870 | MtrunA17_Chr5g0443131 | 62.667 | 75 | 28 | 0 | 349 | 423 | 143 | 217 | 4.92e-26 | 108 |
Msa0413870 | MtrunA17_Chr5g0443131 | 52.239 | 67 | 31 | 1 | 196 | 261 | 157 | 223 | 2.40e-14 | 73.9 |
Msa0413870 | MtrunA17_Chr4g0051881 | 61.333 | 75 | 29 | 0 | 349 | 423 | 164 | 238 | 8.52e-26 | 108 |
Msa0413870 | MtrunA17_Chr4g0051881 | 45.263 | 95 | 50 | 2 | 196 | 289 | 178 | 271 | 2.78e-18 | 86.3 |
Msa0413870 | MtrunA17_Chr1g0194481 | 52.747 | 91 | 43 | 0 | 347 | 437 | 142 | 232 | 1.16e-25 | 107 |
Msa0413870 | MtrunA17_Chr1g0194481 | 44.444 | 81 | 40 | 2 | 183 | 258 | 141 | 221 | 2.98e-15 | 77.0 |
Msa0413870 | MtrunA17_Chr8g0386241 | 56.250 | 80 | 35 | 0 | 342 | 421 | 82 | 161 | 1.19e-25 | 103 |
Msa0413870 | MtrunA17_Chr8g0386241 | 43.820 | 89 | 44 | 3 | 165 | 252 | 77 | 160 | 2.31e-17 | 80.1 |
Msa0413870 | MtrunA17_Chr7g0224801 | 54.321 | 81 | 37 | 0 | 354 | 434 | 84 | 164 | 7.93e-25 | 100 |
Msa0413870 | MtrunA17_Chr7g0224801 | 50.000 | 72 | 31 | 2 | 182 | 252 | 83 | 150 | 1.16e-15 | 75.1 |
Msa0413870 | MtrunA17_Chr3g0099641 | 47.727 | 88 | 45 | 1 | 336 | 422 | 224 | 311 | 2.04e-24 | 106 |
Msa0413870 | MtrunA17_Chr3g0099641 | 41.975 | 81 | 45 | 2 | 197 | 275 | 252 | 332 | 1.57e-13 | 72.8 |
Msa0413870 | MtrunA17_Chr4g0060271 | 53.846 | 78 | 35 | 1 | 346 | 422 | 238 | 315 | 3.37e-24 | 106 |
Msa0413870 | MtrunA17_Chr4g0060271 | 50.000 | 62 | 29 | 2 | 196 | 255 | 255 | 316 | 4.49e-13 | 71.6 |
Msa0413870 | MtrunA17_Chr2g0288871 | 54.430 | 79 | 35 | 1 | 345 | 422 | 287 | 365 | 4.10e-24 | 105 |
Msa0413870 | MtrunA17_Chr2g0288871 | 37.615 | 109 | 53 | 3 | 161 | 254 | 257 | 365 | 2.38e-13 | 72.4 |
Msa0413870 | MtrunA17_Chr8g0383251 | 54.795 | 73 | 33 | 0 | 350 | 422 | 95 | 167 | 4.53e-24 | 99.4 |
Msa0413870 | MtrunA17_Chr8g0383251 | 45.946 | 74 | 35 | 2 | 182 | 254 | 98 | 167 | 6.79e-14 | 70.1 |
Msa0413870 | MtrunA17_Chr4g0051181 | 55.128 | 78 | 34 | 1 | 347 | 423 | 227 | 304 | 5.98e-24 | 104 |
Msa0413870 | MtrunA17_Chr4g0051181 | 53.226 | 62 | 27 | 2 | 197 | 256 | 244 | 305 | 7.69e-15 | 77.0 |
Msa0413870 | MtrunA17_Chr4g0075201 | 54.430 | 79 | 35 | 1 | 345 | 422 | 249 | 327 | 8.17e-24 | 104 |
Msa0413870 | MtrunA17_Chr4g0075201 | 38.889 | 90 | 49 | 3 | 173 | 256 | 240 | 329 | 6.26e-13 | 70.9 |
Msa0413870 | MtrunA17_Chr2g0322391 | 54.430 | 79 | 35 | 1 | 345 | 422 | 331 | 409 | 1.12e-23 | 104 |
Msa0413870 | MtrunA17_Chr2g0322391 | 41.463 | 82 | 46 | 2 | 196 | 275 | 349 | 430 | 2.61e-12 | 69.3 |
Msa0413870 | MtrunA17_Chr7g0270831 | 38.889 | 144 | 65 | 4 | 310 | 452 | 171 | 292 | 1.52e-23 | 103 |
Msa0413870 | MtrunA17_Chr7g0270831 | 44.000 | 75 | 40 | 2 | 197 | 269 | 217 | 291 | 1.42e-13 | 72.8 |
Msa0413870 | MtrunA17_Chr4g0068541 | 53.488 | 86 | 40 | 0 | 347 | 432 | 192 | 277 | 1.68e-23 | 102 |
Msa0413870 | MtrunA17_Chr4g0068541 | 57.377 | 61 | 25 | 1 | 196 | 255 | 208 | 268 | 5.85e-15 | 77.0 |
Msa0413870 | MtrunA17_Chr7g0248721 | 54.023 | 87 | 39 | 1 | 333 | 419 | 111 | 196 | 1.85e-23 | 98.6 |
Msa0413870 | MtrunA17_Chr7g0248721 | 56.897 | 58 | 23 | 2 | 196 | 252 | 141 | 197 | 3.93e-13 | 68.9 |
Msa0413870 | MtrunA17_Chr3g0129321 | 54.667 | 75 | 34 | 0 | 349 | 423 | 104 | 178 | 3.96e-23 | 97.4 |
Msa0413870 | MtrunA17_Chr3g0129321 | 45.333 | 75 | 36 | 2 | 182 | 255 | 108 | 178 | 1.40e-13 | 69.7 |
Msa0413870 | MtrunA17_Chr7g0216891 | 54.667 | 75 | 33 | 1 | 346 | 419 | 202 | 276 | 1.50e-22 | 101 |
Msa0413870 | MtrunA17_Chr7g0216891 | 51.613 | 62 | 28 | 2 | 196 | 255 | 219 | 280 | 4.66e-13 | 71.6 |
Msa0413870 | MtrunA17_Chr1g0147881 | 41.379 | 145 | 73 | 4 | 281 | 423 | 189 | 323 | 2.65e-22 | 98.2 |
Msa0413870 | MtrunA17_Chr1g0147881 | 48.571 | 70 | 34 | 2 | 197 | 264 | 263 | 332 | 1.37e-12 | 68.9 |
Msa0413870 | MtrunA17_Chr2g0302391 | 48.936 | 94 | 46 | 2 | 331 | 422 | 178 | 271 | 6.45e-22 | 98.2 |
Msa0413870 | MtrunA17_Chr2g0302391 | 45.205 | 73 | 38 | 2 | 197 | 267 | 212 | 284 | 7.64e-12 | 67.4 |
Msa0413870 | MtrunA17_Chr4g0053281 | 43.636 | 110 | 46 | 3 | 319 | 427 | 237 | 331 | 7.17e-22 | 96.7 |
Msa0413870 | MtrunA17_Chr4g0053281 | 50.000 | 66 | 31 | 2 | 197 | 260 | 267 | 332 | 3.34e-14 | 73.9 |
Msa0413870 | MtrunA17_Chr4g0025051 | 43.564 | 101 | 56 | 1 | 324 | 423 | 296 | 396 | 1.12e-21 | 98.6 |
Msa0413870 | MtrunA17_Chr4g0025051 | 30.216 | 139 | 91 | 3 | 149 | 281 | 284 | 422 | 7.72e-13 | 70.9 |
Msa0413870 | MtrunA17_Chr4g0025061 | 45.263 | 95 | 51 | 1 | 330 | 423 | 327 | 421 | 1.89e-21 | 97.8 |
Msa0413870 | MtrunA17_Chr4g0025061 | 33.333 | 135 | 84 | 3 | 153 | 281 | 313 | 447 | 2.02e-15 | 79.0 |
Msa0413870 | MtrunA17_Chr3g0136961 | 54.795 | 73 | 30 | 3 | 350 | 419 | 123 | 195 | 1.17e-20 | 92.4 |
Msa0413870 | MtrunA17_Chr3g0136961 | 45.000 | 80 | 38 | 3 | 197 | 274 | 139 | 214 | 3.46e-14 | 73.2 |
Msa0413870 | MtrunA17_Chr1g0189391 | 56.338 | 71 | 30 | 1 | 350 | 419 | 84 | 154 | 1.17e-20 | 93.2 |
Msa0413870 | MtrunA17_Chr1g0189391 | 45.455 | 77 | 39 | 3 | 196 | 270 | 97 | 172 | 2.86e-12 | 68.2 |
Msa0413870 | MtrunA17_Chr5g0401821 | 53.165 | 79 | 36 | 1 | 344 | 421 | 180 | 258 | 1.78e-20 | 91.3 |
Msa0413870 | MtrunA17_Chr5g0401821 | 54.386 | 57 | 24 | 2 | 197 | 251 | 200 | 256 | 2.30e-13 | 70.5 |
Msa0413870 | MtrunA17_Chr7g0238921 | 64.912 | 57 | 20 | 0 | 363 | 419 | 124 | 180 | 2.26e-20 | 92.0 |
Msa0413870 | MtrunA17_Chr7g0238921 | 59.649 | 57 | 22 | 1 | 196 | 251 | 124 | 180 | 1.47e-14 | 74.7 |
Msa0413870 | MtrunA17_Chr6g0485431 | 54.667 | 75 | 33 | 1 | 349 | 422 | 140 | 214 | 2.97e-20 | 92.4 |
Msa0413870 | MtrunA17_Chr6g0485431 | 39.796 | 98 | 51 | 3 | 187 | 276 | 145 | 242 | 4.26e-13 | 70.9 |
Msa0413870 | MtrunA17_Chr4g0071521 | 47.368 | 95 | 44 | 3 | 343 | 436 | 228 | 317 | 1.25e-19 | 89.7 |
Msa0413870 | MtrunA17_Chr4g0071521 | 46.032 | 63 | 32 | 2 | 197 | 257 | 246 | 308 | 2.57e-11 | 65.1 |
Msa0413870 | MtrunA17_Chr4g0001361 | 45.714 | 105 | 41 | 5 | 361 | 449 | 160 | 264 | 2.04e-19 | 89.4 |
Msa0413870 | MtrunA17_Chr4g0001361 | 53.333 | 60 | 26 | 2 | 197 | 254 | 163 | 222 | 1.78e-15 | 77.4 |
Msa0413870 | MtrunA17_Chr6g0468181 | 67.241 | 58 | 19 | 0 | 212 | 269 | 18 | 75 | 4.49e-19 | 83.2 |
Msa0413870 | MtrunA17_Chr2g0333851 | 54.688 | 64 | 28 | 1 | 361 | 423 | 167 | 230 | 2.81e-18 | 85.9 |
Msa0413870 | MtrunA17_Chr2g0333851 | 50.000 | 60 | 28 | 2 | 197 | 254 | 170 | 229 | 5.42e-14 | 73.2 |
Msa0413870 | MtrunA17_Chr1g0150271 | 39.048 | 105 | 49 | 4 | 361 | 455 | 99 | 198 | 4.02e-18 | 84.3 |
Msa0413870 | MtrunA17_Chr1g0150271 | 48.333 | 60 | 29 | 2 | 197 | 254 | 102 | 161 | 1.47e-12 | 67.8 |
Msa0413870 | MtrunA17_Chr1g0150281 | 47.945 | 73 | 35 | 2 | 350 | 419 | 125 | 197 | 8.89e-18 | 84.0 |
Msa0413870 | MtrunA17_Chr1g0150281 | 50.877 | 57 | 26 | 2 | 197 | 251 | 141 | 197 | 3.91e-13 | 70.1 |
Msa0413870 | MtrunA17_Chr1g0184691 | 50.000 | 78 | 38 | 1 | 343 | 419 | 273 | 350 | 1.02e-17 | 84.7 |
Msa0413870 | MtrunA17_Chr1g0184691 | 54.237 | 59 | 25 | 2 | 197 | 253 | 294 | 352 | 3.44e-13 | 70.9 |
Msa0413870 | MtrunA17_Chr4g0024391 | 31.343 | 134 | 89 | 2 | 325 | 457 | 191 | 322 | 1.25e-16 | 82.4 |
Msa0413870 | MtrunA17_Chr3g0139021 | 48.101 | 79 | 40 | 1 | 343 | 420 | 294 | 372 | 1.39e-16 | 81.6 |
Msa0413870 | MtrunA17_Chr8g0379461 | 46.667 | 75 | 39 | 1 | 364 | 437 | 77 | 151 | 3.63e-16 | 78.2 |
Msa0413870 | MtrunA17_Chr8g0379461 | 38.710 | 93 | 53 | 3 | 197 | 287 | 77 | 167 | 4.34e-13 | 69.3 |
Msa0413870 | MtrunA17_Chr7g0228941 | 46.154 | 78 | 41 | 1 | 343 | 419 | 32 | 109 | 4.34e-16 | 74.7 |
Msa0413870 | MtrunA17_Chr7g0228941 | 39.744 | 78 | 41 | 3 | 180 | 251 | 32 | 109 | 7.44e-12 | 62.8 |
Msa0413870 | MtrunA17_Chr2g0284321 | 50.704 | 71 | 34 | 1 | 364 | 433 | 36 | 106 | 5.78e-16 | 77.0 |
Msa0413870 | MtrunA17_Chr2g0284321 | 39.640 | 111 | 63 | 4 | 197 | 303 | 36 | 146 | 7.10e-14 | 70.9 |
Msa0413870 | MtrunA17_Chr2g0289181 | 56.250 | 64 | 26 | 2 | 197 | 258 | 15 | 78 | 1.23e-15 | 76.3 |
Msa0413870 | MtrunA17_Chr2g0289181 | 54.098 | 61 | 27 | 1 | 364 | 423 | 15 | 75 | 6.16e-15 | 74.3 |
Msa0413870 | MtrunA17_Chr2g0319961 | 50.794 | 63 | 30 | 1 | 364 | 425 | 81 | 143 | 2.21e-15 | 76.3 |
Msa0413870 | MtrunA17_Chr7g0270051 | 46.575 | 73 | 38 | 1 | 364 | 435 | 54 | 126 | 3.97e-15 | 75.5 |
Msa0413870 | MtrunA17_Chr7g0270051 | 50.000 | 68 | 32 | 2 | 197 | 262 | 54 | 121 | 8.95e-14 | 71.6 |
Msa0413870 | MtrunA17_Chr1g0202461 | 42.353 | 85 | 47 | 2 | 344 | 427 | 243 | 326 | 6.51e-15 | 76.6 |
Msa0413870 | MtrunA17_Chr1g0202461 | 42.105 | 76 | 38 | 3 | 195 | 268 | 260 | 331 | 9.25e-11 | 63.5 |
Msa0413870 | MtrunA17_Chr8g0348311 | 45.349 | 86 | 45 | 2 | 364 | 447 | 156 | 241 | 1.54e-14 | 75.1 |
Msa0413870 | MtrunA17_Chr8g0387501 | 45.946 | 74 | 39 | 1 | 362 | 434 | 128 | 201 | 2.96e-14 | 73.2 |
Msa0413870 | MtrunA17_Chr8g0387501 | 45.946 | 74 | 34 | 3 | 197 | 268 | 130 | 199 | 1.86e-12 | 67.8 |
Msa0413870 | MtrunA17_Chr2g0293481 | 47.692 | 65 | 33 | 1 | 364 | 427 | 268 | 332 | 1.96e-13 | 72.4 |
Msa0413870 | MtrunA17_Chr7g0248691 | 46.667 | 75 | 38 | 2 | 364 | 436 | 155 | 229 | 3.21e-13 | 70.9 |
Msa0413870 | MtrunA17_Chr7g0248691 | 28.692 | 237 | 145 | 8 | 109 | 338 | 65 | 284 | 3.69e-12 | 67.4 |
Msa0413870 | MtrunA17_Chr1g0188961 | 59.615 | 52 | 20 | 1 | 383 | 434 | 3 | 53 | 6.39e-13 | 63.9 |
Msa0413870 | MtrunA17_Chr1g0188971 | 60.000 | 45 | 18 | 0 | 339 | 383 | 38 | 82 | 8.71e-13 | 63.9 |
Msa0413870 | MtrunA17_Chr3g0126391 | 37.719 | 114 | 56 | 5 | 196 | 294 | 133 | 246 | 3.45e-12 | 67.8 |
Msa0413870 | MtrunA17_Chr3g0126391 | 37.719 | 114 | 58 | 3 | 362 | 472 | 132 | 235 | 1.01e-11 | 66.2 |
Msa0413870 | MtrunA17_Chr8g0387981 | 51.724 | 58 | 24 | 2 | 196 | 249 | 132 | 189 | 4.65e-12 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0413870 | AT2G38470.1 | 43.548 | 558 | 227 | 19 | 1 | 510 | 1 | 518 | 5.95e-111 | 339 |
Msa0413870 | AT5G07100.1 | 48.087 | 366 | 91 | 10 | 62 | 425 | 28 | 296 | 1.73e-93 | 287 |
Msa0413870 | AT2G03340.1 | 45.226 | 398 | 187 | 9 | 39 | 429 | 108 | 481 | 5.18e-93 | 293 |
Msa0413870 | AT2G03340.1 | 60.000 | 70 | 27 | 1 | 363 | 432 | 250 | 318 | 1.41e-19 | 92.0 |
Msa0413870 | AT4G26640.2 | 43.409 | 440 | 176 | 12 | 40 | 432 | 37 | 450 | 6.72e-91 | 288 |
Msa0413870 | AT4G26640.7 | 43.953 | 430 | 173 | 12 | 51 | 432 | 1 | 410 | 1.66e-90 | 286 |
Msa0413870 | AT2G30250.1 | 45.000 | 440 | 173 | 15 | 1 | 423 | 1 | 388 | 3.14e-89 | 279 |
Msa0413870 | AT2G30250.1 | 55.385 | 65 | 28 | 1 | 197 | 260 | 329 | 393 | 8.06e-16 | 79.7 |
Msa0413870 | AT4G26640.5 | 56.911 | 246 | 93 | 4 | 195 | 432 | 34 | 274 | 5.85e-87 | 273 |
Msa0413870 | AT4G26640.6 | 56.911 | 246 | 93 | 4 | 195 | 432 | 34 | 274 | 5.85e-87 | 273 |
Msa0413870 | AT4G26640.4 | 56.911 | 246 | 93 | 4 | 195 | 432 | 34 | 274 | 5.85e-87 | 273 |
Msa0413870 | AT4G26640.3 | 56.911 | 246 | 93 | 4 | 195 | 432 | 34 | 274 | 5.85e-87 | 273 |
Msa0413870 | AT4G26640.1 | 56.911 | 246 | 93 | 4 | 195 | 432 | 138 | 378 | 3.55e-86 | 274 |
Msa0413870 | AT5G07100.2 | 59.583 | 240 | 43 | 7 | 189 | 425 | 15 | 203 | 2.56e-83 | 257 |
Msa0413870 | AT5G07100.4 | 59.583 | 240 | 43 | 7 | 189 | 425 | 15 | 203 | 2.56e-83 | 257 |
Msa0413870 | AT5G07100.5 | 59.583 | 240 | 43 | 7 | 189 | 425 | 15 | 203 | 2.56e-83 | 257 |
Msa0413870 | AT5G07100.3 | 59.583 | 240 | 43 | 7 | 189 | 425 | 15 | 203 | 2.56e-83 | 257 |
Msa0413870 | AT1G13960.1 | 43.032 | 409 | 165 | 12 | 39 | 422 | 103 | 468 | 7.35e-83 | 266 |
Msa0413870 | AT1G13960.1 | 52.273 | 88 | 27 | 2 | 356 | 429 | 208 | 294 | 8.67e-19 | 89.7 |
Msa0413870 | AT1G13960.2 | 54.435 | 248 | 86 | 4 | 195 | 422 | 75 | 315 | 1.13e-79 | 253 |
Msa0413870 | AT1G13960.2 | 52.273 | 88 | 27 | 2 | 356 | 429 | 55 | 141 | 6.53e-19 | 89.0 |
Msa0413870 | AT3G01080.1 | 55.702 | 228 | 73 | 4 | 195 | 422 | 166 | 365 | 7.13e-73 | 238 |
Msa0413870 | AT3G01080.2 | 55.702 | 228 | 73 | 4 | 195 | 422 | 204 | 403 | 1.05e-72 | 238 |
Msa0413870 | AT4G26440.1 | 37.037 | 459 | 188 | 14 | 67 | 476 | 88 | 494 | 4.23e-72 | 239 |
Msa0413870 | AT2G04880.2 | 45.238 | 252 | 111 | 5 | 190 | 425 | 105 | 345 | 1.11e-61 | 209 |
Msa0413870 | AT2G37260.3 | 45.736 | 258 | 99 | 6 | 193 | 421 | 82 | 327 | 3.45e-59 | 199 |
Msa0413870 | AT2G37260.2 | 45.736 | 258 | 99 | 6 | 193 | 421 | 80 | 325 | 3.75e-59 | 199 |
Msa0413870 | AT2G04880.1 | 42.804 | 271 | 114 | 5 | 190 | 425 | 105 | 369 | 1.41e-58 | 202 |
Msa0413870 | AT2G04880.1 | 53.731 | 67 | 30 | 1 | 189 | 254 | 300 | 366 | 5.65e-15 | 77.8 |
Msa0413870 | AT2G37260.1 | 45.736 | 258 | 99 | 6 | 193 | 421 | 162 | 407 | 1.91e-58 | 200 |
Msa0413870 | AT4G30935.1 | 43.162 | 234 | 119 | 8 | 197 | 425 | 169 | 393 | 7.48e-49 | 175 |
Msa0413870 | AT4G30935.1 | 40.179 | 112 | 61 | 3 | 197 | 307 | 332 | 438 | 4.69e-16 | 80.9 |
Msa0413870 | AT4G12020.6 | 46.798 | 203 | 94 | 3 | 191 | 383 | 463 | 661 | 9.89e-47 | 175 |
Msa0413870 | AT4G12020.6 | 52.459 | 61 | 28 | 1 | 362 | 422 | 467 | 526 | 3.31e-12 | 70.1 |
Msa0413870 | AT4G12020.8 | 46.798 | 203 | 94 | 3 | 191 | 383 | 463 | 661 | 9.89e-47 | 175 |
Msa0413870 | AT4G12020.8 | 52.459 | 61 | 28 | 1 | 362 | 422 | 467 | 526 | 3.31e-12 | 70.1 |
Msa0413870 | AT4G12020.1 | 46.798 | 203 | 94 | 3 | 191 | 383 | 463 | 661 | 1.10e-46 | 175 |
Msa0413870 | AT4G12020.1 | 52.459 | 61 | 28 | 1 | 362 | 422 | 467 | 526 | 3.43e-12 | 70.1 |
Msa0413870 | AT4G12020.9 | 46.798 | 203 | 94 | 3 | 191 | 383 | 463 | 661 | 1.10e-46 | 175 |
Msa0413870 | AT4G12020.9 | 52.459 | 61 | 28 | 1 | 362 | 422 | 467 | 526 | 3.43e-12 | 70.1 |
Msa0413870 | AT4G12020.10 | 46.798 | 203 | 94 | 3 | 191 | 383 | 463 | 661 | 1.16e-46 | 175 |
Msa0413870 | AT4G12020.10 | 52.459 | 61 | 28 | 1 | 362 | 422 | 467 | 526 | 3.52e-12 | 70.1 |
Msa0413870 | AT4G12020.3 | 46.798 | 203 | 94 | 3 | 191 | 383 | 463 | 661 | 1.17e-46 | 175 |
Msa0413870 | AT4G12020.3 | 52.459 | 61 | 28 | 1 | 362 | 422 | 467 | 526 | 3.55e-12 | 69.7 |
Msa0413870 | AT4G12020.7 | 46.798 | 203 | 94 | 3 | 191 | 383 | 463 | 661 | 1.17e-46 | 175 |
Msa0413870 | AT4G12020.7 | 52.459 | 61 | 28 | 1 | 362 | 422 | 467 | 526 | 3.49e-12 | 70.1 |
Msa0413870 | AT4G12020.2 | 46.798 | 203 | 94 | 3 | 191 | 383 | 463 | 661 | 1.18e-46 | 175 |
Msa0413870 | AT4G12020.2 | 52.459 | 61 | 28 | 1 | 362 | 422 | 467 | 526 | 3.46e-12 | 70.1 |
Msa0413870 | AT4G12020.4 | 46.798 | 203 | 94 | 3 | 191 | 383 | 463 | 661 | 1.19e-46 | 175 |
Msa0413870 | AT4G12020.4 | 52.459 | 61 | 28 | 1 | 362 | 422 | 467 | 526 | 3.43e-12 | 70.1 |
Msa0413870 | AT4G12020.11 | 46.798 | 203 | 94 | 3 | 191 | 383 | 463 | 661 | 1.32e-46 | 175 |
Msa0413870 | AT4G12020.11 | 52.459 | 61 | 28 | 1 | 362 | 422 | 467 | 526 | 4.38e-12 | 69.3 |
Msa0413870 | AT4G12020.5 | 46.798 | 203 | 94 | 3 | 191 | 383 | 396 | 594 | 1.52e-46 | 175 |
Msa0413870 | AT4G12020.5 | 52.459 | 61 | 28 | 1 | 362 | 422 | 400 | 459 | 3.78e-12 | 69.7 |
Msa0413870 | AT5G56270.1 | 74.510 | 102 | 24 | 1 | 324 | 425 | 450 | 549 | 1.12e-45 | 170 |
Msa0413870 | AT5G56270.1 | 39.013 | 223 | 103 | 7 | 67 | 259 | 117 | 336 | 5.97e-30 | 124 |
Msa0413870 | AT5G56270.1 | 55.844 | 77 | 25 | 3 | 183 | 256 | 478 | 548 | 3.00e-16 | 82.4 |
Msa0413870 | AT5G56270.1 | 59.677 | 62 | 24 | 1 | 363 | 424 | 273 | 333 | 6.12e-16 | 81.3 |
Msa0413870 | AT2G44745.1 | 67.105 | 76 | 25 | 0 | 344 | 419 | 126 | 201 | 1.88e-31 | 121 |
Msa0413870 | AT2G44745.1 | 52.113 | 71 | 29 | 2 | 182 | 251 | 135 | 201 | 1.45e-16 | 79.3 |
Msa0413870 | AT4G18170.1 | 52.727 | 110 | 45 | 2 | 320 | 422 | 122 | 231 | 1.61e-28 | 115 |
Msa0413870 | AT4G18170.1 | 47.436 | 78 | 36 | 2 | 183 | 255 | 155 | 232 | 1.88e-15 | 77.8 |
Msa0413870 | AT4G39410.1 | 64.474 | 76 | 27 | 0 | 344 | 419 | 204 | 279 | 2.10e-28 | 115 |
Msa0413870 | AT4G39410.1 | 43.000 | 100 | 47 | 4 | 182 | 280 | 213 | 303 | 1.29e-15 | 78.2 |
Msa0413870 | AT1G29860.1 | 64.935 | 77 | 27 | 0 | 347 | 423 | 120 | 196 | 1.75e-27 | 112 |
Msa0413870 | AT1G29860.1 | 58.333 | 60 | 24 | 1 | 196 | 254 | 136 | 195 | 3.64e-15 | 76.3 |
Msa0413870 | AT1G55600.1 | 60.714 | 84 | 32 | 1 | 339 | 422 | 284 | 366 | 2.61e-27 | 115 |
Msa0413870 | AT1G55600.1 | 54.430 | 79 | 30 | 2 | 184 | 256 | 290 | 368 | 6.30e-17 | 84.0 |
Msa0413870 | AT5G49520.1 | 64.198 | 81 | 28 | 1 | 347 | 426 | 205 | 285 | 5.02e-27 | 113 |
Msa0413870 | AT5G49520.1 | 51.389 | 72 | 34 | 1 | 196 | 266 | 221 | 292 | 1.57e-15 | 79.0 |
Msa0413870 | AT1G69310.4 | 58.140 | 86 | 35 | 1 | 342 | 426 | 126 | 211 | 7.79e-27 | 110 |
Msa0413870 | AT1G69310.4 | 47.222 | 72 | 33 | 2 | 185 | 251 | 132 | 203 | 5.68e-13 | 70.1 |
Msa0413870 | AT1G69310.2 | 58.140 | 86 | 35 | 1 | 342 | 426 | 126 | 211 | 7.79e-27 | 110 |
Msa0413870 | AT1G69310.2 | 47.222 | 72 | 33 | 2 | 185 | 251 | 132 | 203 | 5.68e-13 | 70.1 |
Msa0413870 | AT1G69310.1 | 58.140 | 86 | 35 | 1 | 342 | 426 | 126 | 211 | 7.79e-27 | 110 |
Msa0413870 | AT1G69310.1 | 47.222 | 72 | 33 | 2 | 185 | 251 | 132 | 203 | 5.68e-13 | 70.1 |
Msa0413870 | AT1G64000.1 | 58.750 | 80 | 33 | 0 | 340 | 419 | 91 | 170 | 7.80e-27 | 107 |
Msa0413870 | AT1G64000.1 | 56.897 | 58 | 24 | 1 | 196 | 252 | 114 | 171 | 6.42e-16 | 76.6 |
Msa0413870 | AT4G04450.2 | 41.538 | 130 | 63 | 2 | 337 | 465 | 172 | 289 | 1.83e-26 | 112 |
Msa0413870 | AT4G04450.2 | 44.156 | 77 | 41 | 2 | 197 | 271 | 199 | 275 | 9.55e-14 | 73.6 |
Msa0413870 | AT3G01970.1 | 56.471 | 85 | 37 | 0 | 350 | 434 | 52 | 136 | 1.97e-26 | 105 |
Msa0413870 | AT3G01970.1 | 50.704 | 71 | 30 | 2 | 182 | 251 | 55 | 121 | 2.15e-14 | 70.9 |
Msa0413870 | AT4G04450.1 | 41.538 | 130 | 63 | 2 | 337 | 465 | 266 | 383 | 7.93e-26 | 111 |
Msa0413870 | AT4G04450.1 | 44.156 | 77 | 41 | 2 | 197 | 271 | 293 | 369 | 1.40e-13 | 73.6 |
Msa0413870 | AT5G26170.1 | 60.000 | 70 | 28 | 0 | 350 | 419 | 100 | 169 | 1.31e-25 | 103 |
Msa0413870 | AT5G26170.1 | 47.887 | 71 | 32 | 2 | 182 | 251 | 103 | 169 | 1.88e-16 | 77.8 |
Msa0413870 | AT3G01080.3 | 69.697 | 66 | 19 | 1 | 195 | 260 | 204 | 268 | 1.53e-25 | 107 |
Msa0413870 | AT3G01080.3 | 55.224 | 67 | 29 | 1 | 363 | 429 | 205 | 270 | 9.86e-16 | 79.0 |
Msa0413870 | AT5G13080.1 | 61.111 | 72 | 28 | 0 | 350 | 421 | 54 | 125 | 1.72e-25 | 102 |
Msa0413870 | AT5G13080.1 | 51.389 | 72 | 30 | 2 | 182 | 252 | 57 | 124 | 1.74e-17 | 79.7 |
Msa0413870 | AT5G41570.1 | 59.211 | 76 | 31 | 0 | 344 | 419 | 79 | 154 | 2.45e-25 | 103 |
Msa0413870 | AT5G41570.1 | 40.404 | 99 | 50 | 3 | 159 | 252 | 61 | 155 | 1.37e-16 | 78.2 |
Msa0413870 | AT5G46350.1 | 57.500 | 80 | 34 | 0 | 349 | 428 | 169 | 248 | 3.51e-25 | 106 |
Msa0413870 | AT5G46350.1 | 42.308 | 104 | 53 | 3 | 186 | 284 | 169 | 270 | 1.43e-15 | 78.2 |
Msa0413870 | AT5G15130.2 | 48.077 | 104 | 39 | 2 | 346 | 448 | 168 | 257 | 4.46e-25 | 108 |
Msa0413870 | AT5G15130.2 | 32.456 | 114 | 71 | 3 | 161 | 272 | 150 | 259 | 1.44e-12 | 70.5 |
Msa0413870 | AT5G15130.1 | 48.077 | 104 | 39 | 2 | 346 | 448 | 210 | 299 | 4.90e-25 | 108 |
Msa0413870 | AT5G15130.1 | 32.456 | 114 | 71 | 3 | 161 | 272 | 192 | 301 | 1.40e-12 | 70.5 |
Msa0413870 | AT2G46130.1 | 53.571 | 84 | 39 | 0 | 336 | 419 | 3 | 86 | 9.79e-25 | 99.0 |
Msa0413870 | AT2G46130.1 | 58.621 | 58 | 23 | 1 | 196 | 252 | 30 | 87 | 9.43e-16 | 73.6 |
Msa0413870 | AT2G47260.1 | 59.211 | 76 | 31 | 0 | 347 | 422 | 158 | 233 | 1.07e-24 | 105 |
Msa0413870 | AT2G47260.1 | 33.594 | 128 | 80 | 2 | 167 | 293 | 149 | 272 | 6.01e-14 | 73.6 |
Msa0413870 | AT5G64810.1 | 59.155 | 71 | 29 | 0 | 350 | 420 | 97 | 167 | 1.21e-24 | 101 |
Msa0413870 | AT5G64810.1 | 33.835 | 133 | 66 | 5 | 120 | 251 | 55 | 166 | 5.98e-14 | 70.9 |
Msa0413870 | AT4G22070.4 | 52.874 | 87 | 40 | 1 | 337 | 422 | 271 | 357 | 2.86e-24 | 106 |
Msa0413870 | AT4G22070.4 | 51.667 | 60 | 27 | 2 | 197 | 254 | 298 | 357 | 8.69e-13 | 71.2 |
Msa0413870 | AT4G22070.3 | 52.874 | 87 | 40 | 1 | 337 | 422 | 271 | 357 | 2.86e-24 | 106 |
Msa0413870 | AT4G22070.3 | 51.667 | 60 | 27 | 2 | 197 | 254 | 298 | 357 | 8.69e-13 | 71.2 |
Msa0413870 | AT4G22070.2 | 52.874 | 87 | 40 | 1 | 337 | 422 | 271 | 357 | 2.86e-24 | 106 |
Msa0413870 | AT4G22070.2 | 51.667 | 60 | 27 | 2 | 197 | 254 | 298 | 357 | 8.69e-13 | 71.2 |
Msa0413870 | AT4G22070.1 | 52.874 | 87 | 40 | 1 | 337 | 422 | 271 | 357 | 2.86e-24 | 106 |
Msa0413870 | AT4G22070.1 | 51.667 | 60 | 27 | 2 | 197 | 254 | 298 | 357 | 8.69e-13 | 71.2 |
Msa0413870 | AT1G68150.1 | 53.409 | 88 | 37 | 2 | 337 | 423 | 212 | 296 | 3.02e-24 | 104 |
Msa0413870 | AT1G68150.1 | 41.667 | 108 | 55 | 3 | 197 | 296 | 236 | 343 | 1.18e-15 | 79.0 |
Msa0413870 | AT1G62300.1 | 55.696 | 79 | 34 | 1 | 345 | 422 | 294 | 372 | 8.45e-24 | 105 |
Msa0413870 | AT1G62300.1 | 31.724 | 145 | 89 | 4 | 116 | 254 | 232 | 372 | 1.67e-13 | 73.6 |
Msa0413870 | AT1G18860.1 | 52.564 | 78 | 36 | 1 | 346 | 422 | 222 | 299 | 2.29e-22 | 100 |
Msa0413870 | AT1G18860.1 | 50.820 | 61 | 28 | 2 | 196 | 254 | 239 | 299 | 7.09e-12 | 68.2 |
Msa0413870 | AT4G01720.1 | 55.844 | 77 | 33 | 1 | 347 | 422 | 223 | 299 | 2.34e-22 | 100 |
Msa0413870 | AT4G01720.1 | 50.820 | 61 | 28 | 2 | 196 | 254 | 239 | 299 | 1.19e-12 | 70.5 |
Msa0413870 | AT1G69310.3 | 54.651 | 86 | 34 | 2 | 342 | 426 | 126 | 207 | 4.60e-22 | 96.7 |
Msa0413870 | AT2G23320.1 | 51.899 | 79 | 34 | 2 | 344 | 421 | 224 | 299 | 8.24e-21 | 93.6 |
Msa0413870 | AT2G23320.1 | 56.140 | 57 | 23 | 2 | 197 | 251 | 241 | 297 | 5.00e-13 | 70.5 |
Msa0413870 | AT4G24240.1 | 49.438 | 89 | 44 | 1 | 343 | 430 | 261 | 349 | 1.40e-20 | 93.6 |
Msa0413870 | AT4G24240.1 | 56.140 | 57 | 23 | 2 | 197 | 251 | 282 | 338 | 1.21e-13 | 72.8 |
Msa0413870 | AT4G31550.1 | 56.410 | 78 | 30 | 2 | 344 | 420 | 230 | 304 | 1.81e-20 | 92.8 |
Msa0413870 | AT4G31550.1 | 57.895 | 57 | 22 | 2 | 197 | 251 | 247 | 303 | 7.51e-14 | 73.2 |
Msa0413870 | AT4G31550.2 | 56.410 | 78 | 30 | 2 | 344 | 420 | 229 | 303 | 1.85e-20 | 92.8 |
Msa0413870 | AT4G31550.2 | 57.895 | 57 | 22 | 2 | 197 | 251 | 246 | 302 | 7.58e-14 | 73.2 |
Msa0413870 | AT3G62340.1 | 55.263 | 76 | 34 | 0 | 347 | 422 | 102 | 177 | 2.21e-20 | 91.7 |
Msa0413870 | AT3G62340.1 | 48.000 | 75 | 34 | 2 | 186 | 255 | 104 | 178 | 3.57e-14 | 73.6 |
Msa0413870 | AT2G24570.1 | 57.692 | 78 | 29 | 2 | 343 | 419 | 226 | 300 | 2.87e-20 | 92.0 |
Msa0413870 | AT2G24570.1 | 50.704 | 71 | 33 | 2 | 197 | 265 | 244 | 314 | 4.13e-14 | 73.9 |
Msa0413870 | AT2G46130.2 | 50.000 | 84 | 38 | 1 | 336 | 419 | 3 | 82 | 4.11e-20 | 85.9 |
Msa0413870 | AT2G46130.2 | 53.448 | 58 | 22 | 2 | 196 | 252 | 30 | 83 | 3.13e-11 | 60.8 |
Msa0413870 | AT2G21900.1 | 50.667 | 75 | 34 | 1 | 352 | 423 | 95 | 169 | 2.26e-19 | 87.0 |
Msa0413870 | AT2G21900.1 | 34.188 | 117 | 67 | 3 | 147 | 254 | 53 | 168 | 5.76e-14 | 71.2 |
Msa0413870 | AT5G28650.1 | 51.948 | 77 | 36 | 1 | 344 | 419 | 243 | 319 | 4.96e-19 | 88.6 |
Msa0413870 | AT5G28650.1 | 48.438 | 64 | 31 | 2 | 197 | 258 | 263 | 326 | 1.08e-11 | 66.6 |
Msa0413870 | AT1G80840.1 | 50.000 | 70 | 34 | 1 | 361 | 429 | 144 | 213 | 6.31e-19 | 87.8 |
Msa0413870 | AT1G80840.1 | 50.000 | 60 | 28 | 2 | 197 | 254 | 147 | 206 | 2.29e-13 | 71.2 |
Msa0413870 | AT2G30590.1 | 52.564 | 78 | 36 | 1 | 343 | 419 | 293 | 370 | 1.52e-18 | 87.8 |
Msa0413870 | AT2G30590.1 | 54.237 | 59 | 25 | 2 | 197 | 253 | 314 | 372 | 6.48e-13 | 70.9 |
Msa0413870 | AT4G31800.2 | 50.725 | 69 | 32 | 2 | 356 | 422 | 103 | 171 | 1.71e-18 | 85.5 |
Msa0413870 | AT4G31800.2 | 42.667 | 75 | 41 | 2 | 197 | 269 | 112 | 186 | 2.33e-13 | 70.5 |
Msa0413870 | AT3G04670.1 | 51.948 | 77 | 36 | 1 | 344 | 419 | 243 | 319 | 1.89e-18 | 87.0 |
Msa0413870 | AT3G04670.1 | 50.000 | 64 | 30 | 2 | 197 | 258 | 263 | 326 | 1.82e-12 | 68.9 |
Msa0413870 | AT4G31800.1 | 50.725 | 69 | 32 | 2 | 356 | 422 | 168 | 236 | 3.14e-18 | 85.9 |
Msa0413870 | AT4G31800.1 | 42.667 | 75 | 41 | 2 | 197 | 269 | 177 | 251 | 4.08e-13 | 70.9 |
Msa0413870 | AT5G43290.1 | 61.017 | 59 | 23 | 0 | 361 | 419 | 112 | 170 | 3.40e-18 | 85.1 |
Msa0413870 | AT5G43290.1 | 62.069 | 58 | 21 | 1 | 195 | 251 | 113 | 170 | 1.46e-15 | 77.4 |
Msa0413870 | AT2G25000.2 | 50.000 | 62 | 30 | 1 | 362 | 422 | 102 | 163 | 1.63e-17 | 82.0 |
Msa0413870 | AT2G25000.2 | 44.286 | 70 | 37 | 2 | 197 | 264 | 104 | 173 | 3.83e-12 | 66.6 |
Msa0413870 | AT2G25000.4 | 50.000 | 62 | 30 | 1 | 362 | 422 | 102 | 163 | 1.63e-17 | 82.0 |
Msa0413870 | AT2G25000.4 | 44.286 | 70 | 37 | 2 | 197 | 264 | 104 | 173 | 3.83e-12 | 66.6 |
Msa0413870 | AT2G25000.3 | 50.000 | 62 | 30 | 1 | 362 | 422 | 124 | 185 | 3.27e-17 | 81.6 |
Msa0413870 | AT2G25000.3 | 44.286 | 70 | 37 | 2 | 197 | 264 | 126 | 195 | 5.87e-12 | 66.2 |
Msa0413870 | AT2G25000.1 | 50.000 | 62 | 30 | 1 | 362 | 422 | 145 | 206 | 4.61e-17 | 81.6 |
Msa0413870 | AT2G25000.1 | 44.286 | 70 | 37 | 2 | 197 | 264 | 147 | 216 | 8.51e-12 | 66.2 |
Msa0413870 | AT4G23550.1 | 42.553 | 94 | 49 | 2 | 352 | 440 | 129 | 222 | 6.35e-17 | 82.0 |
Msa0413870 | AT1G69810.2 | 45.570 | 79 | 41 | 2 | 346 | 422 | 128 | 206 | 8.73e-17 | 82.0 |
Msa0413870 | AT1G69810.1 | 45.570 | 79 | 41 | 2 | 346 | 422 | 186 | 264 | 1.11e-16 | 82.4 |
Msa0413870 | AT4G01250.1 | 46.512 | 86 | 44 | 2 | 364 | 447 | 129 | 214 | 1.36e-15 | 77.8 |
Msa0413870 | AT4G01250.1 | 34.959 | 123 | 69 | 5 | 197 | 316 | 129 | 243 | 6.78e-11 | 63.9 |
Msa0413870 | AT1G29280.1 | 51.667 | 60 | 28 | 1 | 364 | 422 | 75 | 134 | 6.34e-15 | 75.1 |
Msa0413870 | AT1G29280.1 | 47.619 | 63 | 31 | 2 | 197 | 257 | 75 | 137 | 5.42e-12 | 66.6 |
Msa0413870 | AT3G58710.1 | 36.170 | 141 | 77 | 4 | 294 | 429 | 4 | 136 | 3.44e-14 | 73.2 |
Msa0413870 | AT3G58710.1 | 46.753 | 77 | 38 | 3 | 197 | 271 | 72 | 147 | 3.38e-11 | 64.3 |
Msa0413870 | AT5G45260.1 | 33.824 | 136 | 77 | 4 | 141 | 272 | 1162 | 1288 | 4.63e-14 | 75.9 |
Msa0413870 | AT3G58710.2 | 50.746 | 67 | 30 | 2 | 364 | 429 | 71 | 135 | 6.97e-14 | 72.4 |
Msa0413870 | AT3G58710.2 | 46.753 | 77 | 38 | 3 | 197 | 271 | 71 | 146 | 3.35e-11 | 64.3 |
Msa0413870 | AT5G52830.1 | 42.353 | 85 | 47 | 2 | 344 | 427 | 147 | 230 | 9.47e-14 | 73.2 |
Msa0413870 | AT5G52830.1 | 33.846 | 130 | 68 | 6 | 195 | 316 | 164 | 283 | 3.67e-12 | 68.2 |
Msa0413870 | AT2G34830.1 | 49.206 | 63 | 31 | 1 | 364 | 425 | 216 | 278 | 2.66e-13 | 72.4 |
Msa0413870 | AT2G34830.2 | 47.692 | 65 | 33 | 1 | 364 | 427 | 225 | 289 | 2.66e-13 | 72.4 |
Msa0413870 | AT1G30650.1 | 49.206 | 63 | 31 | 1 | 364 | 425 | 218 | 280 | 5.63e-13 | 71.2 |
Msa0413870 | AT2G40740.1 | 43.750 | 80 | 38 | 3 | 196 | 268 | 173 | 252 | 5.09e-12 | 67.0 |
Msa0413870 | AT5G45050.1 | 47.692 | 65 | 33 | 1 | 364 | 427 | 1181 | 1245 | 6.32e-12 | 68.9 |
Msa0413870 | AT5G45050.4 | 47.692 | 65 | 33 | 1 | 364 | 427 | 1042 | 1106 | 6.43e-12 | 68.9 |
Msa0413870 | AT5G45050.4 | 42.857 | 91 | 46 | 4 | 175 | 261 | 1018 | 1106 | 9.80e-11 | 65.1 |
Msa0413870 | AT2G40740.3 | 43.750 | 80 | 38 | 3 | 196 | 268 | 182 | 261 | 6.50e-12 | 67.0 |
Msa0413870 | AT5G45050.2 | 47.692 | 65 | 33 | 1 | 364 | 427 | 1153 | 1217 | 6.52e-12 | 68.9 |
Msa0413870 | AT5G24110.1 | 46.032 | 63 | 30 | 2 | 191 | 249 | 108 | 170 | 3.28e-11 | 64.7 |
Msa0413870 | AT4G11070.2 | 41.860 | 86 | 39 | 4 | 187 | 261 | 95 | 180 | 4.64e-11 | 64.3 |
Msa0413870 | AT2G46400.1 | 35.632 | 87 | 52 | 2 | 350 | 432 | 91 | 177 | 5.06e-11 | 64.3 |
Msa0413870 | AT2G46400.1 | 42.254 | 71 | 37 | 2 | 196 | 262 | 104 | 174 | 6.42e-11 | 63.9 |
Msa0413870 | AT4G11070.1 | 42.529 | 87 | 37 | 5 | 187 | 261 | 127 | 212 | 6.05e-11 | 64.3 |
Find 120 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCCTCCTTCAAATCATTT+TGG | 0.095807 | 3_2:-58788291 | Msa0413870:CDS |
AAGAGAGGTGTAGGAGAAAT+AGG | 0.219713 | 3_2:+58789678 | None:intergenic |
GAGATCTTTCGGTGTCTTTA+AGG | 0.223046 | 3_2:+58789775 | None:intergenic |
TTTCGGTGTCTTTAAGGTTT+TGG | 0.266179 | 3_2:+58789781 | None:intergenic |
GTGCATTTGTAATAGCTTCT+TGG | 0.267267 | 3_2:+58788468 | None:intergenic |
TGAAACATTGTTGTTGTTGA+TGG | 0.270698 | 3_2:+58786446 | None:intergenic |
AGGAGGTGTAGACTTGAATT+TGG | 0.275405 | 3_2:+58789710 | None:intergenic |
GGATACAGATGGAGGAAATA+TGG | 0.277797 | 3_2:-58787798 | Msa0413870:CDS |
TTTGGTCGGTTGGAGAATTA+AGG | 0.278875 | 3_2:+58789799 | None:intergenic |
GGATACAATTGGAGAAAATA+TGG | 0.306925 | 3_2:-58788519 | Msa0413870:CDS |
TCCTTCCAAGCTCAACCAGC+TGG | 0.315203 | 3_2:-58788999 | Msa0413870:CDS |
AACAATGTTTCACTTCATAA+TGG | 0.317177 | 3_2:-58786435 | Msa0413870:CDS |
GGAGGTGTAGACTTGAATTT+GGG | 0.318965 | 3_2:+58789711 | None:intergenic |
TTGGTTTGTTAAGGTGAAAA+AGG | 0.342355 | 3_2:+58789940 | None:intergenic |
AAATGAAATTCAAATGGATT+TGG | 0.360393 | 3_2:-58788268 | Msa0413870:CDS |
ATTGAAGGGTTGGTTTGTTA+AGG | 0.368889 | 3_2:+58789931 | None:intergenic |
GAGCAGACTTCTCATAAATC+TGG | 0.371375 | 3_2:-58788198 | Msa0413870:CDS |
TTGAATCTTTCCTATCTTGA+AGG | 0.379314 | 3_2:-58786281 | None:intergenic |
CTCTTGTTAGCCACAGGCTT+AGG | 0.389420 | 3_2:+58788357 | None:intergenic |
CTAATAATGAAGGCTTCAAT+TGG | 0.393130 | 3_2:-58789088 | Msa0413870:CDS |
AAAGTTGAGAGGGGTTTAGA+TGG | 0.393749 | 3_2:-58788420 | Msa0413870:CDS |
CGTGTTAATAATATTATTAG+AGG | 0.394719 | 3_2:-58786342 | Msa0413870:CDS |
ACGTTGTTATCACTGCTCTT+AGG | 0.396252 | 3_2:+58786583 | None:intergenic |
GTTGTTGTTGATGGAATTGT+TGG | 0.400906 | 3_2:+58786455 | None:intergenic |
GTCTTCCTCGTCGTCGTCAC+TGG | 0.404260 | 3_2:-58788319 | Msa0413870:CDS |
TGAGAAGAGTTAAGGAGAAC+AGG | 0.405323 | 3_2:+58789594 | None:intergenic |
TAATATTGCAGGAGAATAGA+AGG | 0.406189 | 3_2:-58787918 | Msa0413870:intron |
CACTTGATGATGAGATCTTT+CGG | 0.406857 | 3_2:+58789764 | None:intergenic |
GAAAATGAGGGAATATCATT+AGG | 0.411282 | 3_2:-58787894 | Msa0413870:CDS |
AAAGAACATTCCTTCAAGAT+AGG | 0.411668 | 3_2:+58786271 | None:intergenic |
GTGTTCCTCTTGTTAGCCAC+AGG | 0.416619 | 3_2:+58788351 | None:intergenic |
CATCATCTGATCTTCTACTA+AGG | 0.429029 | 3_2:+58788541 | None:intergenic |
GGAGGAGGGTGATGAAATGA+AGG | 0.434263 | 3_2:+58789983 | None:intergenic |
GAATGAGAGAAGGGTGAAGA+AGG | 0.438325 | 3_2:+58789962 | None:intergenic |
AAATCAATAAATTGAAGGGT+TGG | 0.439082 | 3_2:+58789921 | None:intergenic |
GTAGGAGAAATAGGAAGAGA+TGG | 0.441968 | 3_2:+58789687 | None:intergenic |
TTAGCAAATGATCCGGTAGT+TGG | 0.442580 | 3_2:+58789107 | None:intergenic |
GATACAGATGGAGGAAATAT+GGG | 0.445361 | 3_2:-58787797 | Msa0413870:CDS |
CCAAAATGATTTGAAGGAGG+AGG | 0.450538 | 3_2:+58788291 | None:intergenic |
GTTGTTTGAACAACAACTCT+TGG | 0.451286 | 3_2:+58787846 | None:intergenic |
GATCAGATGATGGATACAAT+TGG | 0.451349 | 3_2:-58788530 | Msa0413870:CDS |
ATCTTCTACAGGCTCCTCCT+TGG | 0.451413 | 3_2:+58786314 | None:intergenic |
GGATCATTTGCTAATAATGA+AGG | 0.453023 | 3_2:-58789098 | Msa0413870:CDS |
AAGTGTTGTCGGATCAAAAC+AGG | 0.453220 | 3_2:-58789746 | Msa0413870:CDS |
GAAGGAGAAAAGAGAGGTGT+AGG | 0.456766 | 3_2:+58789669 | None:intergenic |
GAGAATAGAAGGTGAAAATG+AGG | 0.457475 | 3_2:-58787907 | Msa0413870:CDS |
ATAGTTGTTTGCATTGGTAG+TGG | 0.460987 | 3_2:+58786495 | None:intergenic |
TCATTTCCAAAATGATTTGA+AGG | 0.461658 | 3_2:+58788285 | None:intergenic |
GACTTACATGAGAAGAGTTA+AGG | 0.463339 | 3_2:+58789586 | None:intergenic |
GACATTGATATTCTAGATGA+TGG | 0.466100 | 3_2:-58787819 | Msa0413870:CDS |
GGTATAGAAAAGTAAGAAGA+AGG | 0.468052 | 3_2:+58789651 | None:intergenic |
CCTTCCAAGCTCAACCAGCT+GGG | 0.469628 | 3_2:-58788998 | Msa0413870:CDS |
TTCATTATTAGCAAATGATC+CGG | 0.475551 | 3_2:+58789100 | None:intergenic |
CCCAGCTGGTTGAGCTTGGA+AGG | 0.483118 | 3_2:+58788998 | None:intergenic |
GAAACCCAGCTGGTTGAGCT+TGG | 0.484107 | 3_2:+58788994 | None:intergenic |
GAAGGAGAAACTTGATGAGA+TGG | 0.486771 | 3_2:+58789016 | None:intergenic |
ATCTCATCATCAAGTGTTGT+CGG | 0.493343 | 3_2:-58789757 | Msa0413870:CDS |
TATGGGCAGAAAGTAGTAAA+GGG | 0.499601 | 3_2:-58787780 | Msa0413870:CDS |
CAATTGGAAGAATAATTATG+AGG | 0.501111 | 3_2:-58789072 | Msa0413870:CDS |
GAGAAGGGTGAAGAAGGAGG+AGG | 0.502324 | 3_2:+58789968 | None:intergenic |
TTGTCGGATCAAAACAGGTC+GGG | 0.503694 | 3_2:-58789741 | Msa0413870:CDS |
AGAAGGGTGAAGAAGGAGGA+GGG | 0.505648 | 3_2:+58789969 | None:intergenic |
AATGGATTTGGTTGCTACAC+CGG | 0.505910 | 3_2:-58788256 | Msa0413870:CDS |
AGAAAGAGGAGGTCATTGAA+TGG | 0.506814 | 3_2:+58789832 | None:intergenic |
AAGGAGGTCAGAGAAGAAAG+AGG | 0.508130 | 3_2:+58789818 | None:intergenic |
GTTCCTGCACCACGTGGAAG+TGG | 0.514980 | 3_2:-58786537 | Msa0413870:CDS |
TGAGAGAAGGGTGAAGAAGG+AGG | 0.515433 | 3_2:+58789965 | None:intergenic |
ATATGGGCAGAAAGTAGTAA+AGG | 0.520616 | 3_2:-58787781 | Msa0413870:CDS |
GATGGAATTGTTGGCACTTG+TGG | 0.521173 | 3_2:+58786464 | None:intergenic |
GGAGAAATAGGAAGAGATGG+AGG | 0.527547 | 3_2:+58789690 | None:intergenic |
TTTCCACTTCCACGTGGTGC+AGG | 0.529414 | 3_2:+58786534 | None:intergenic |
TTGTTCATAGTTGTTTGCAT+TGG | 0.537129 | 3_2:+58786489 | None:intergenic |
CTACTAAGGATTTGAACTTG+TGG | 0.539306 | 3_2:+58788555 | None:intergenic |
GTAGTGGTTTGTTGATAGAG+TGG | 0.539439 | 3_2:+58786511 | None:intergenic |
AGCTCAGAAAGAGAAAAGCC+AGG | 0.544999 | 3_2:+58789627 | None:intergenic |
CACTGCTCTTAGGTCTTGTG+AGG | 0.545249 | 3_2:+58786593 | None:intergenic |
AGAATAGAAGGTGAAAATGA+GGG | 0.546664 | 3_2:-58787906 | Msa0413870:CDS |
TCACTAGTAGAATTACTCTC+TGG | 0.547481 | 3_2:+58788630 | None:intergenic |
GCAGTGATAACAACGTATGA+AGG | 0.549349 | 3_2:-58786576 | Msa0413870:CDS |
GAAATAGGAAGAGATGGAGG+AGG | 0.551676 | 3_2:+58789693 | None:intergenic |
GAGAATTCATCGATATCGAT+TGG | 0.558388 | 3_2:-58788234 | Msa0413870:CDS |
GAGGGAATATCATTAGGAGC+TGG | 0.558610 | 3_2:-58787888 | Msa0413870:CDS |
TACTACAAGTGCACAAACCC+AGG | 0.561370 | 3_2:-58786645 | Msa0413870:CDS |
AATGATCCGGTAGTTGGAGA+TGG | 0.563554 | 3_2:+58789113 | None:intergenic |
ATCGATATCGATGAATTCTC+CGG | 0.566337 | 3_2:+58788237 | None:intergenic |
CTTAGTAGAAGATCAGATGA+TGG | 0.566844 | 3_2:-58788540 | Msa0413870:CDS |
GATGCAGAACAATGGATTCA+CGG | 0.571686 | 3_2:-58786394 | Msa0413870:CDS |
GTCGAAGATTGAAACCCAGC+TGG | 0.571777 | 3_2:+58788984 | None:intergenic |
AGCTGGAAATAGAACAGTGA+GGG | 0.575113 | 3_2:-58787871 | Msa0413870:CDS |
ATTCTTCCATCTCCAACTAC+CGG | 0.576159 | 3_2:-58789119 | Msa0413870:CDS |
TTTCCAAAATGATTTGAAGG+AGG | 0.580319 | 3_2:+58788288 | None:intergenic |
CTAGTAGAATTACTCTCTGG+TGG | 0.580327 | 3_2:+58788633 | None:intergenic |
AGAGAATGTCAAGGCAGAAG+AGG | 0.589262 | 3_2:-58789042 | Msa0413870:CDS |
TTCTAGATGATGGATACAGA+TGG | 0.589347 | 3_2:-58787809 | Msa0413870:CDS |
TAAGAAGAAGGAGAAAAGAG+AGG | 0.593576 | 3_2:+58789663 | None:intergenic |
CAGACTTCTCATAAATCTGG+TGG | 0.596367 | 3_2:-58788195 | Msa0413870:CDS |
AATGAGATGATGCAGAACAA+TGG | 0.599597 | 3_2:-58786402 | Msa0413870:CDS |
TAAAGGGAAATCCAAATCCA+AGG | 0.599938 | 3_2:-58787764 | Msa0413870:intron |
TAGTAGAATTACTCTCTGGT+GGG | 0.614330 | 3_2:+58788634 | None:intergenic |
GGTCGGTTGGAGAATTAAGG+AGG | 0.622030 | 3_2:+58789802 | None:intergenic |
CTAAGCCTGTGGCTAACAAG+AGG | 0.622068 | 3_2:-58788356 | Msa0413870:CDS |
TATTATTAGAGGTAGAGCCA+AGG | 0.625277 | 3_2:-58786331 | Msa0413870:CDS |
GGTGTAGACTTGAATTTGGG+GGG | 0.629490 | 3_2:+58789714 | None:intergenic |
GTTTCAATCTTCGACCACCA+CGG | 0.629999 | 3_2:-58788976 | Msa0413870:CDS |
ATACCAACAGGGATGGAACA+TGG | 0.636942 | 3_2:-58788691 | Msa0413870:intron |
AGGTGTAGACTTGAATTTGG+GGG | 0.639825 | 3_2:+58789713 | None:intergenic |
ATTACTGAGATTGTTTACAA+AGG | 0.646662 | 3_2:-58788393 | Msa0413870:CDS |
TATTAGAGGTAGAGCCAAGG+AGG | 0.647426 | 3_2:-58786328 | Msa0413870:CDS |
TCATAATCATCCTAAGCCTG+TGG | 0.651078 | 3_2:-58788367 | Msa0413870:CDS |
ATTTGCCAGTGACGACGACG+AGG | 0.651421 | 3_2:+58788314 | None:intergenic |
GTTGTCGGATCAAAACAGGT+CGG | 0.656679 | 3_2:-58789742 | Msa0413870:CDS |
GGAAAAGCAAGAGAATGTCA+AGG | 0.656877 | 3_2:-58789051 | Msa0413870:CDS |
AGTGAACAAAACAACAAGAG+TGG | 0.657175 | 3_2:-58788612 | Msa0413870:CDS |
CATGATGTTCCTGCACCACG+TGG | 0.664697 | 3_2:-58786543 | Msa0413870:CDS |
TAGATGATGGATACAGATGG+AGG | 0.677154 | 3_2:-58787806 | Msa0413870:CDS |
GAGGTCAGAGAAGAAAGAGG+AGG | 0.687171 | 3_2:+58789821 | None:intergenic |
GAGGTGTAGACTTGAATTTG+GGG | 0.712764 | 3_2:+58789712 | None:intergenic |
GAGTGGTTTCCACTTCCACG+TGG | 0.715134 | 3_2:+58786528 | None:intergenic |
TCAGAAAGAGAAAAGCCAGG+AGG | 0.750551 | 3_2:+58789630 | None:intergenic |
GAGCTGGAAATAGAACAGTG+AGG | 0.774963 | 3_2:-58787872 | Msa0413870:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTAATTTTATTAATATTGC+AGG | - | chr3_2:58788342-58788361 | Msa0413870:CDS | 10.0% |
!! | TAAGAAAAATGTATAAATAA+AGG | - | chr3_2:58788780-58788799 | Msa0413870:intron | 10.0% |
!! | GAAAAAATCAATAAATTGAA+GGG | + | chr3_2:58786357-58786376 | None:intergenic | 15.0% |
!! | TGAAAAAATCAATAAATTGA+AGG | + | chr3_2:58786358-58786377 | None:intergenic | 15.0% |
!! | TCAACTATAAAGTATAATTA+AGG | + | chr3_2:58786769-58786788 | None:intergenic | 15.0% |
!!! | AACAATTATGATTCATTTTT+AGG | + | chr3_2:58786927-58786946 | None:intergenic | 15.0% |
!!! | TGAACATTTAATTTTAATCA+TGG | - | chr3_2:58786958-58786977 | Msa0413870:intron | 15.0% |
!!! | TATGTATTTTTCTTTTCATT+TGG | - | chr3_2:58787508-58787527 | Msa0413870:intron | 15.0% |
!!! | TTTTATCATATCACATAAAA+TGG | - | chr3_2:58788197-58788216 | Msa0413870:CDS | 15.0% |
!! | TAATTAGAGTTATATTGTAT+TGG | - | chr3_2:58788974-58788993 | Msa0413870:CDS | 15.0% |
!! | AATTAGAGTTATATTGTATT+GGG | - | chr3_2:58788975-58788994 | Msa0413870:CDS | 15.0% |
!! | CTTGAAAAAAAATTGTATAT+GGG | + | chr3_2:58789236-58789255 | None:intergenic | 15.0% |
!! | TCTTGAAAAAAAATTGTATA+TGG | + | chr3_2:58789237-58789256 | None:intergenic | 15.0% |
!! | TTGTTTACTAAACATAATAT+AGG | - | chr3_2:58789600-58789619 | Msa0413870:CDS | 15.0% |
!! | TATAATTAAGGTGATCAATT+TGG | + | chr3_2:58786757-58786776 | None:intergenic | 20.0% |
!!! | ATCGATTTAATTCTTGTATA+TGG | - | chr3_2:58786879-58786898 | Msa0413870:intron | 20.0% |
!! | ATTTAATTCTTGTATATGGT+TGG | - | chr3_2:58786883-58786902 | Msa0413870:intron | 20.0% |
!!! | ATGAGTTTGATTTTCATATA+TGG | + | chr3_2:58787050-58787069 | None:intergenic | 20.0% |
!!! | TTTTGGAAATGAAATTCAAA+TGG | - | chr3_2:58787997-58788016 | Msa0413870:intron | 20.0% |
!!! | AAATGAAATTCAAATGGATT+TGG | - | chr3_2:58788003-58788022 | Msa0413870:intron | 20.0% |
!!! | AACAACAACTTTTAAAAAGT+TGG | + | chr3_2:58788582-58788601 | None:intergenic | 20.0% |
!!! | TGTTAATTTTGTGTATCTTT+AGG | + | chr3_2:58789176-58789195 | None:intergenic | 20.0% |
!! | ACACAAAATTAACAAAACTA+AGG | - | chr3_2:58789182-58789201 | Msa0413870:intron | 20.0% |
!!! | TTAACAAAACTAAGGTATTT+TGG | - | chr3_2:58789190-58789209 | Msa0413870:intron | 20.0% |
!! | AATGAGTAAAATAAAACTAG+TGG | + | chr3_2:58789562-58789581 | None:intergenic | 20.0% |
!! | CGTGTTAATAATATTATTAG+AGG | - | chr3_2:58789929-58789948 | Msa0413870:five_prime_UTR | 20.0% |
! | AAATCAATAAATTGAAGGGT+TGG | + | chr3_2:58786353-58786372 | None:intergenic | 25.0% |
!! | TTTAAAGTCACATATATGTG+TGG | - | chr3_2:58786986-58787005 | Msa0413870:intron | 25.0% |
! | TTCATTATTAGCAAATGATC+CGG | + | chr3_2:58787174-58787193 | None:intergenic | 25.0% |
! | CAATTGGAAGAATAATTATG+AGG | - | chr3_2:58787199-58787218 | Msa0413870:intron | 25.0% |
!! | TGAGTCTTGTGAATTTAAAT+TGG | + | chr3_2:58787337-58787356 | None:intergenic | 25.0% |
! | TTACCGACAAAAATTAAAGA+CGG | - | chr3_2:58787394-58787413 | Msa0413870:intron | 25.0% |
!!! | TTTCCGTCTTTAATTTTTGT+CGG | + | chr3_2:58787454-58787473 | None:intergenic | 25.0% |
!!! | TTTCCGTCTTTAATTTTTGT+CGG | - | chr3_2:58787454-58787473 | Msa0413870:intron | 25.0% |
! | TTACCGACAAAAATTAAAGA+CGG | + | chr3_2:58787394-58787413 | None:intergenic | 25.0% |
!! | TTTTCTTTGTTGGACAATTA+GGG | + | chr3_2:58787832-58787851 | None:intergenic | 25.0% |
!! | TTTTTCTTTGTTGGACAATT+AGG | + | chr3_2:58787833-58787852 | None:intergenic | 25.0% |
! | AACAAAGAAAAAAGTTGAGA+GGG | - | chr3_2:58787841-58787860 | Msa0413870:CDS | 25.0% |
! | ATTACTGAGATTGTTTACAA+AGG | - | chr3_2:58787878-58787897 | Msa0413870:CDS | 25.0% |
! | TCATTTCCAAAATGATTTGA+AGG | + | chr3_2:58787989-58788008 | None:intergenic | 25.0% |
!!! | AGTAAAAACTCACCATTTTT+TGG | + | chr3_2:58788137-58788156 | None:intergenic | 25.0% |
!! | CCACAATATAACAAATTTTG+AGG | + | chr3_2:58788254-58788273 | None:intergenic | 25.0% |
!!! | CCTCAAAATTTGTTATATTG+TGG | - | chr3_2:58788251-58788270 | Msa0413870:CDS | 25.0% |
! | ATATAAAGTGATCACATTCA+TGG | + | chr3_2:58788291-58788310 | None:intergenic | 25.0% |
!!! | CTTTTTAATTACCTTGGATT+TGG | + | chr3_2:58788521-58788540 | None:intergenic | 25.0% |
! | AAACTACCAAAGCATAAAAA+AGG | + | chr3_2:58788658-58788677 | None:intergenic | 25.0% |
! | TGTATAAATAAAGGAGAAAG+TGG | - | chr3_2:58788789-58788808 | Msa0413870:intron | 25.0% |
!!! | TCAACTAAAGTTGATGTATT+TGG | - | chr3_2:58788852-58788871 | Msa0413870:intron | 25.0% |
!! | TTGATGTATTTGGTTCAAAA+TGG | + | chr3_2:58788881-58788900 | None:intergenic | 25.0% |
!!! | TCAACTAAAGTTGATGTATT+TGG | + | chr3_2:58788852-58788871 | None:intergenic | 25.0% |
!! | TTGAAATGACTCAGTTATTT+TGG | - | chr3_2:58789021-58789040 | Msa0413870:CDS | 25.0% |
!!! | TGAAATGACTCAGTTATTTT+GGG | - | chr3_2:58789022-58789041 | Msa0413870:CDS | 25.0% |
! | ACATTTAAGCAGTTAATTGA+GGG | + | chr3_2:58789114-58789133 | None:intergenic | 25.0% |
!! | TACCATTATAGATCATGTTT+TGG | - | chr3_2:58789352-58789371 | Msa0413870:intron | 25.0% |
! | CAATGTCTAAATATTCTTAC+TGG | - | chr3_2:58789440-58789459 | Msa0413870:intron | 25.0% |
! | ATATTCTTACTGGTCAAATT+TGG | - | chr3_2:58789450-58789469 | Msa0413870:intron | 25.0% |
!! | ATGTGATGTTTAAGACTAAA+GGG | - | chr3_2:58789532-58789551 | Msa0413870:intron | 25.0% |
! | AACAATGTTTCACTTCATAA+TGG | - | chr3_2:58789836-58789855 | Msa0413870:exon | 25.0% |
!! | TTGGTTTGTTAAGGTGAAAA+AGG | + | chr3_2:58786334-58786353 | None:intergenic | 30.0% |
GGTATAGAAAAGTAAGAAGA+AGG | + | chr3_2:58786623-58786642 | None:intergenic | 30.0% | |
!! | TGGTTGTGATTTGTTTAAAG+TGG | - | chr3_2:58787006-58787025 | Msa0413870:intron | 30.0% |
TATGTCTATGTGATTCTAGT+TGG | - | chr3_2:58787092-58787111 | Msa0413870:intron | 30.0% | |
! | GGATCATTTGCTAATAATGA+AGG | - | chr3_2:58787173-58787192 | Msa0413870:intron | 30.0% |
CTAATAATGAAGGCTTCAAT+TGG | - | chr3_2:58787183-58787202 | Msa0413870:intron | 30.0% | |
! | TCGGTAATTCGAGTATTTTT+CGG | - | chr3_2:58787473-58787492 | Msa0413870:intron | 30.0% |
AAACTTTCATGTATACCAAC+AGG | - | chr3_2:58787568-58787587 | Msa0413870:intron | 30.0% | |
AACTTTCATGTATACCAACA+GGG | - | chr3_2:58787569-58787588 | Msa0413870:intron | 30.0% | |
GGATACAATTGGAGAAAATA+TGG | - | chr3_2:58787752-58787771 | Msa0413870:intron | 30.0% | |
TATGGACAAAAACAAGTGAA+AGG | - | chr3_2:58787770-58787789 | Msa0413870:CDS | 30.0% | |
!!! | CTCTCAACTTTTTTCTTTGT+TGG | + | chr3_2:58787842-58787861 | None:intergenic | 30.0% |
CAACAAAGAAAAAAGTTGAG+AGG | - | chr3_2:58787840-58787859 | Msa0413870:CDS | 30.0% | |
ACAAAGAAAAAAGTTGAGAG+GGG | - | chr3_2:58787842-58787861 | Msa0413870:CDS | 30.0% | |
TTTCCAAAATGATTTGAAGG+AGG | + | chr3_2:58787986-58788005 | None:intergenic | 30.0% | |
ATGAACCTGATTCCAAAAAA+TGG | - | chr3_2:58788122-58788141 | Msa0413870:intron | 30.0% | |
! | ACATTCATGGATTTGAAATG+TGG | + | chr3_2:58788278-58788297 | None:intergenic | 30.0% |
TAATATTGCAGGAGAATAGA+AGG | - | chr3_2:58788353-58788372 | Msa0413870:CDS | 30.0% | |
AGAATAGAAGGTGAAAATGA+GGG | - | chr3_2:58788365-58788384 | Msa0413870:CDS | 30.0% | |
GAAAATGAGGGAATATCATT+AGG | - | chr3_2:58788377-58788396 | Msa0413870:CDS | 30.0% | |
GACATTGATATTCTAGATGA+TGG | - | chr3_2:58788452-58788471 | Msa0413870:CDS | 30.0% | |
!! | AGAGTGCTTTTTAATTACCT+TGG | + | chr3_2:58788527-58788546 | None:intergenic | 30.0% |
GGACATGATTTAATAGTCAA+AGG | + | chr3_2:58788561-58788580 | None:intergenic | 30.0% | |
!!! | TTGACTCCTTTTTTATGCTT+TGG | - | chr3_2:58788649-58788668 | Msa0413870:CDS | 30.0% |
! | TCCTTTTTACAAGAGACAAA+TGG | - | chr3_2:58788828-58788847 | Msa0413870:intron | 30.0% |
! | CCTTTTTACAAGAGACAAAT+GGG | - | chr3_2:58788829-58788848 | Msa0413870:intron | 30.0% |
AGAAAATGAGTCAGATATTC+CGG | - | chr3_2:58789057-58789076 | Msa0413870:CDS | 30.0% | |
CACATTTAAGCAGTTAATTG+AGG | + | chr3_2:58789115-58789134 | None:intergenic | 30.0% | |
CTCAATTAACTGCTTAAATG+TGG | - | chr3_2:58789113-58789132 | Msa0413870:CDS | 30.0% | |
!!! | CAAAACTAAGGTATTTTGGT+AGG | - | chr3_2:58789194-58789213 | Msa0413870:intron | 30.0% |
GTCCAAAACATGATCTATAA+TGG | + | chr3_2:58789357-58789376 | None:intergenic | 30.0% | |
! | CAAAAAGTCTTGAGAGTTTT+TGG | + | chr3_2:58789418-58789437 | None:intergenic | 30.0% |
!! | CTTTAGTCTTAAACATCACA+TGG | + | chr3_2:58789533-58789552 | None:intergenic | 30.0% |
! | CATGTGATGTTTAAGACTAA+AGG | - | chr3_2:58789531-58789550 | Msa0413870:intron | 30.0% |
TTGTTCATAGTTGTTTGCAT+TGG | + | chr3_2:58789785-58789804 | None:intergenic | 30.0% | |
! | TGAAACATTGTTGTTGTTGA+TGG | + | chr3_2:58789828-58789847 | None:intergenic | 30.0% |
AAAAATGAGTCATCTTCTAC+AGG | + | chr3_2:58789971-58789990 | None:intergenic | 30.0% | |
GTGAAAAAGGAATGAGAGAA+GGG | + | chr3_2:58786321-58786340 | None:intergenic | 35.0% | |
!! | ATTGAAGGGTTGGTTTGTTA+AGG | + | chr3_2:58786343-58786362 | None:intergenic | 35.0% |
!!! | TTTCGGTGTCTTTAAGGTTT+TGG | + | chr3_2:58786493-58786512 | None:intergenic | 35.0% |
!! | CACTTGATGATGAGATCTTT+CGG | + | chr3_2:58786510-58786529 | None:intergenic | 35.0% |
! | ATCTCATCATCAAGTGTTGT+CGG | - | chr3_2:58786514-58786533 | Msa0413870:CDS | 35.0% |
TAAGAAGAAGGAGAAAAGAG+AGG | + | chr3_2:58786611-58786630 | None:intergenic | 35.0% | |
!! | TCTTACTTTTCTATACCTCC+TGG | - | chr3_2:58786626-58786645 | Msa0413870:CDS | 35.0% |
GACTTACATGAGAAGAGTTA+AGG | + | chr3_2:58786688-58786707 | None:intergenic | 35.0% | |
! | GTTACATACATTTTGAACCG+TGG | + | chr3_2:58787315-58787334 | None:intergenic | 35.0% |
TAGTAGAATTACTCTCTGGT+GGG | + | chr3_2:58787640-58787659 | None:intergenic | 35.0% | |
TCACTAGTAGAATTACTCTC+TGG | + | chr3_2:58787644-58787663 | None:intergenic | 35.0% | |
AGTGAACAAAACAACAAGAG+TGG | - | chr3_2:58787659-58787678 | Msa0413870:intron | 35.0% | |
CTACTAAGGATTTGAACTTG+TGG | + | chr3_2:58787719-58787738 | None:intergenic | 35.0% | |
CATCATCTGATCTTCTACTA+AGG | + | chr3_2:58787733-58787752 | None:intergenic | 35.0% | |
CTTAGTAGAAGATCAGATGA+TGG | - | chr3_2:58787731-58787750 | Msa0413870:intron | 35.0% | |
!! | GATCAGATGATGGATACAAT+TGG | - | chr3_2:58787741-58787760 | Msa0413870:intron | 35.0% |
GTGCATTTGTAATAGCTTCT+TGG | + | chr3_2:58787806-58787825 | None:intergenic | 35.0% | |
ATCGATATCGATGAATTCTC+CGG | + | chr3_2:58788037-58788056 | None:intergenic | 35.0% | |
GAGAATTCATCGATATCGAT+TGG | - | chr3_2:58788037-58788056 | Msa0413870:intron | 35.0% | |
!!! | ACTCACCATTTTTTGGAATC+AGG | + | chr3_2:58788130-58788149 | None:intergenic | 35.0% |
GAGAATAGAAGGTGAAAATG+AGG | - | chr3_2:58788364-58788383 | Msa0413870:CDS | 35.0% | |
GTTGTTTGAACAACAACTCT+TGG | + | chr3_2:58788428-58788447 | None:intergenic | 35.0% | |
!! | TTCTAGATGATGGATACAGA+TGG | - | chr3_2:58788462-58788481 | Msa0413870:CDS | 35.0% |
GATACAGATGGAGGAAATAT+GGG | - | chr3_2:58788474-58788493 | Msa0413870:CDS | 35.0% | |
ATATGGGCAGAAAGTAGTAA+AGG | - | chr3_2:58788490-58788509 | Msa0413870:CDS | 35.0% | |
TATGGGCAGAAAGTAGTAAA+GGG | - | chr3_2:58788491-58788510 | Msa0413870:CDS | 35.0% | |
TAAAGGGAAATCCAAATCCA+AGG | - | chr3_2:58788507-58788526 | Msa0413870:CDS | 35.0% | |
ATCTGTGTGAAAAACCAAAC+TGG | + | chr3_2:58788760-58788779 | None:intergenic | 35.0% | |
TTGTCTCTTGTAAAAAGGAC+CGG | + | chr3_2:58788827-58788846 | None:intergenic | 35.0% | |
CCCATTTGTCTCTTGTAAAA+AGG | + | chr3_2:58788832-58788851 | None:intergenic | 35.0% | |
GAAAATGAGTCAGATATTCC+GGG | - | chr3_2:58789058-58789077 | Msa0413870:CDS | 35.0% | |
! | TTTTGGTAGGTCAAACCTAA+AGG | - | chr3_2:58789207-58789226 | Msa0413870:intron | 35.0% |
! | ATTGTATATGGGTTGCCTTT+AGG | + | chr3_2:58789225-58789244 | None:intergenic | 35.0% |
CACGTGATAGGTAAAGTATA+GGG | + | chr3_2:58789382-58789401 | None:intergenic | 35.0% | |
TGCATGCATTAGAGAAATGT+GGG | + | chr3_2:58789479-58789498 | None:intergenic | 35.0% | |
ATGCATGCATTAGAGAAATG+TGG | + | chr3_2:58789480-58789499 | None:intergenic | 35.0% | |
ACATTTCTCTAATGCATGCA+TGG | - | chr3_2:58789479-58789498 | Msa0413870:intron | 35.0% | |
CATTTCTCTAATGCATGCAT+GGG | - | chr3_2:58789480-58789499 | Msa0413870:intron | 35.0% | |
! | ATAGTTGTTTGCATTGGTAG+TGG | + | chr3_2:58789779-58789798 | None:intergenic | 35.0% |
! | GTTGTTGTTGATGGAATTGT+TGG | + | chr3_2:58789819-58789838 | None:intergenic | 35.0% |
AATGAGATGATGCAGAACAA+TGG | - | chr3_2:58789869-58789888 | Msa0413870:five_prime_UTR | 35.0% | |
TATTATTAGAGGTAGAGCCA+AGG | - | chr3_2:58789940-58789959 | Msa0413870:five_prime_UTR | 35.0% | |
GGTGAAAAAGGAATGAGAGA+AGG | + | chr3_2:58786322-58786341 | None:intergenic | 40.0% | |
AGAAAGAGGAGGTCATTGAA+TGG | + | chr3_2:58786442-58786461 | None:intergenic | 40.0% | |
TTTGGTCGGTTGGAGAATTA+AGG | + | chr3_2:58786475-58786494 | None:intergenic | 40.0% | |
!!! | TCTTTAAGGTTTTGGTCGGT+TGG | + | chr3_2:58786485-58786504 | None:intergenic | 40.0% |
!!! | GGTGTCTTTAAGGTTTTGGT+CGG | + | chr3_2:58786489-58786508 | None:intergenic | 40.0% |
!! | GAGATCTTTCGGTGTCTTTA+AGG | + | chr3_2:58786499-58786518 | None:intergenic | 40.0% |
! | AAGTGTTGTCGGATCAAAAC+AGG | - | chr3_2:58786525-58786544 | Msa0413870:CDS | 40.0% |
AGGTGTAGACTTGAATTTGG+GGG | + | chr3_2:58786561-58786580 | None:intergenic | 40.0% | |
GAGGTGTAGACTTGAATTTG+GGG | + | chr3_2:58786562-58786581 | None:intergenic | 40.0% | |
! | GGAGGTGTAGACTTGAATTT+GGG | + | chr3_2:58786563-58786582 | None:intergenic | 40.0% |
! | AGGAGGTGTAGACTTGAATT+TGG | + | chr3_2:58786564-58786583 | None:intergenic | 40.0% |
GTAGGAGAAATAGGAAGAGA+TGG | + | chr3_2:58786587-58786606 | None:intergenic | 40.0% | |
! | AAGAGAGGTGTAGGAGAAAT+AGG | + | chr3_2:58786596-58786615 | None:intergenic | 40.0% |
TGAGAAGAGTTAAGGAGAAC+AGG | + | chr3_2:58786680-58786699 | None:intergenic | 40.0% | |
ATTCTTCCATCTCCAACTAC+CGG | - | chr3_2:58787152-58787171 | Msa0413870:intron | 40.0% | |
TTAGCAAATGATCCGGTAGT+TGG | + | chr3_2:58787167-58787186 | None:intergenic | 40.0% | |
GGAAAAGCAAGAGAATGTCA+AGG | - | chr3_2:58787220-58787239 | Msa0413870:intron | 40.0% | |
GAAGGAGAAACTTGATGAGA+TGG | + | chr3_2:58787258-58787277 | None:intergenic | 40.0% | |
! | ACATACATTTTGAACCGTGG+TGG | + | chr3_2:58787312-58787331 | None:intergenic | 40.0% |
TTCATGTATACCAACAGGGA+TGG | - | chr3_2:58787573-58787592 | Msa0413870:intron | 40.0% | |
CTAGTAGAATTACTCTCTGG+TGG | + | chr3_2:58787641-58787660 | None:intergenic | 40.0% | |
AAAGTTGAGAGGGGTTTAGA+TGG | - | chr3_2:58787851-58787870 | Msa0413870:CDS | 40.0% | |
TCATAATCATCCTAAGCCTG+TGG | - | chr3_2:58787904-58787923 | Msa0413870:CDS | 40.0% | |
CCAAAATGATTTGAAGGAGG+AGG | + | chr3_2:58787983-58788002 | None:intergenic | 40.0% | |
! | CCTCCTCCTTCAAATCATTT+TGG | - | chr3_2:58787980-58787999 | Msa0413870:intron | 40.0% |
! | AATGGATTTGGTTGCTACAC+CGG | - | chr3_2:58788015-58788034 | Msa0413870:intron | 40.0% |
GAGCAGACTTCTCATAAATC+TGG | - | chr3_2:58788073-58788092 | Msa0413870:intron | 40.0% | |
CAGACTTCTCATAAATCTGG+TGG | - | chr3_2:58788076-58788095 | Msa0413870:intron | 40.0% | |
AGCTGGAAATAGAACAGTGA+GGG | - | chr3_2:58788400-58788419 | Msa0413870:CDS | 40.0% | |
!! | TAGATGATGGATACAGATGG+AGG | - | chr3_2:58788465-58788484 | Msa0413870:CDS | 40.0% |
GGATACAGATGGAGGAAATA+TGG | - | chr3_2:58788473-58788492 | Msa0413870:CDS | 40.0% | |
! | CAAACTGGCTCAGATAAAAC+GGG | + | chr3_2:58788745-58788764 | None:intergenic | 40.0% |
! | CCAAACTGGCTCAGATAAAA+CGG | + | chr3_2:58788746-58788765 | None:intergenic | 40.0% |
AAAGTGGAATATACTCCCTC+CGG | - | chr3_2:58788805-58788824 | Msa0413870:intron | 40.0% | |
TTAGTTGACCCATTTGTCTC+CGG | - | chr3_2:58788903-58788922 | Msa0413870:intron | 40.0% | |
! | CCTTTTTACCGGAGACAAAT+GGG | + | chr3_2:58788914-58788933 | None:intergenic | 40.0% |
! | TCCTTTTTACCGGAGACAAA+TGG | + | chr3_2:58788915-58788934 | None:intergenic | 40.0% |
GTGATAGGTAAAGTATAGGG+TGG | + | chr3_2:58789379-58789398 | None:intergenic | 40.0% | |
GCACGTGATAGGTAAAGTAT+AGG | + | chr3_2:58789383-58789402 | None:intergenic | 40.0% | |
CTATTTCAACTGCACGTGAT+AGG | + | chr3_2:58789394-58789413 | None:intergenic | 40.0% | |
ACGTTGTTATCACTGCTCTT+AGG | + | chr3_2:58789691-58789710 | None:intergenic | 40.0% | |
GCAGTGATAACAACGTATGA+AGG | - | chr3_2:58789695-58789714 | Msa0413870:CDS | 40.0% | |
!! | GTAGTGGTTTGTTGATAGAG+TGG | + | chr3_2:58789763-58789782 | None:intergenic | 40.0% |
! | GATGCAGAACAATGGATTCA+CGG | - | chr3_2:58789877-58789896 | Msa0413870:five_prime_UTR | 40.0% |
GAATGAGAGAAGGGTGAAGA+AGG | + | chr3_2:58786312-58786331 | None:intergenic | 45.0% | |
AAGGAGGTCAGAGAAGAAAG+AGG | + | chr3_2:58786456-58786475 | None:intergenic | 45.0% | |
GTTGTCGGATCAAAACAGGT+CGG | - | chr3_2:58786529-58786548 | Msa0413870:CDS | 45.0% | |
TTGTCGGATCAAAACAGGTC+GGG | - | chr3_2:58786530-58786549 | Msa0413870:CDS | 45.0% | |
GGTGTAGACTTGAATTTGGG+GGG | + | chr3_2:58786560-58786579 | None:intergenic | 45.0% | |
GAAATAGGAAGAGATGGAGG+AGG | + | chr3_2:58786581-58786600 | None:intergenic | 45.0% | |
GGAGAAATAGGAAGAGATGG+AGG | + | chr3_2:58786584-58786603 | None:intergenic | 45.0% | |
! | GAAGGAGAAAAGAGAGGTGT+AGG | + | chr3_2:58786605-58786624 | None:intergenic | 45.0% |
TCAGAAAGAGAAAAGCCAGG+AGG | + | chr3_2:58786644-58786663 | None:intergenic | 45.0% | |
AGCTCAGAAAGAGAAAAGCC+AGG | + | chr3_2:58786647-58786666 | None:intergenic | 45.0% | |
AATGATCCGGTAGTTGGAGA+TGG | + | chr3_2:58787161-58787180 | None:intergenic | 45.0% | |
AGAGAATGTCAAGGCAGAAG+AGG | - | chr3_2:58787229-58787248 | Msa0413870:intron | 45.0% | |
GTTTCAATCTTCGACCACCA+CGG | - | chr3_2:58787295-58787314 | Msa0413870:intron | 45.0% | |
ATACCAACAGGGATGGAACA+TGG | - | chr3_2:58787580-58787599 | Msa0413870:intron | 45.0% | |
GAGGGAATATCATTAGGAGC+TGG | - | chr3_2:58788383-58788402 | Msa0413870:CDS | 45.0% | |
GAGCTGGAAATAGAACAGTG+AGG | - | chr3_2:58788399-58788418 | Msa0413870:CDS | 45.0% | |
GCTCAGATAAAACGGGAAAG+AGG | + | chr3_2:58788738-58788757 | None:intergenic | 45.0% | |
! | CCGTTTTATCTGAGCCAGTT+TGG | - | chr3_2:58788743-58788762 | Msa0413870:intron | 45.0% |
CTCTTGTAAAAAGGACCGGA+GGG | + | chr3_2:58788823-58788842 | None:intergenic | 45.0% | |
TCTCTTGTAAAAAGGACCGG+AGG | + | chr3_2:58788824-58788843 | None:intergenic | 45.0% | |
CCCATTTGTCTCCGGTAAAA+AGG | - | chr3_2:58788911-58788930 | Msa0413870:intron | 45.0% | |
TTGTCTCCGGTAAAAAGGAC+CGG | - | chr3_2:58788916-58788935 | Msa0413870:intron | 45.0% | |
!! | ACCGGAGGGAGTATTGTATT+GGG | - | chr3_2:58788934-58788953 | Msa0413870:intron | 45.0% |
TCCCAATACAATACTCCCTC+CGG | + | chr3_2:58788938-58788957 | None:intergenic | 45.0% | |
ATGAGTCAGATATTCCGGGA+CGG | - | chr3_2:58789062-58789081 | Msa0413870:CDS | 45.0% | |
TACTACAAGTGCACAAACCC+AGG | - | chr3_2:58789626-58789645 | Msa0413870:CDS | 45.0% | |
! | GTTTTCTCACTGGACATCCT+GGG | + | chr3_2:58789646-58789665 | None:intergenic | 45.0% |
! | TGTTTTCTCACTGGACATCC+TGG | + | chr3_2:58789647-58789666 | None:intergenic | 45.0% |
! | CGTTCGACATGTTTTCTCAC+TGG | + | chr3_2:58789656-58789675 | None:intergenic | 45.0% |
GATGGAATTGTTGGCACTTG+TGG | + | chr3_2:58789810-58789829 | None:intergenic | 45.0% | |
TATTAGAGGTAGAGCCAAGG+AGG | - | chr3_2:58789943-58789962 | Msa0413870:five_prime_UTR | 45.0% | |
GGAGGAGGGTGATGAAATGA+AGG | + | chr3_2:58786291-58786310 | None:intergenic | 50.0% | |
AGAAGGGTGAAGAAGGAGGA+GGG | + | chr3_2:58786305-58786324 | None:intergenic | 50.0% | |
TGAGAGAAGGGTGAAGAAGG+AGG | + | chr3_2:58786309-58786328 | None:intergenic | 50.0% | |
GAGGTCAGAGAAGAAAGAGG+AGG | + | chr3_2:58786453-58786472 | None:intergenic | 50.0% | |
GGTCGGTTGGAGAATTAAGG+AGG | + | chr3_2:58786472-58786491 | None:intergenic | 50.0% | |
GTCGAAGATTGAAACCCAGC+TGG | + | chr3_2:58787290-58787309 | None:intergenic | 50.0% | |
TCACCATGTTCCATCCCTGT+TGG | + | chr3_2:58787586-58787605 | None:intergenic | 50.0% | |
CTCTTGTTAGCCACAGGCTT+AGG | + | chr3_2:58787917-58787936 | None:intergenic | 50.0% | |
CTAAGCCTGTGGCTAACAAG+AGG | - | chr3_2:58787915-58787934 | Msa0413870:intron | 50.0% | |
GTGTTCCTCTTGTTAGCCAC+AGG | + | chr3_2:58787923-58787942 | None:intergenic | 50.0% | |
!! | GACCGGAGGGAGTATTGTAT+TGG | - | chr3_2:58788933-58788952 | Msa0413870:intron | 50.0% |
! | CACTGCTCTTAGGTCTTGTG+AGG | + | chr3_2:58789681-58789700 | None:intergenic | 50.0% |
ATCTTCTACAGGCTCCTCCT+TGG | + | chr3_2:58789960-58789979 | None:intergenic | 50.0% | |
GAGAAGGGTGAAGAAGGAGG+AGG | + | chr3_2:58786306-58786325 | None:intergenic | 55.0% | |
TCCTTCCAAGCTCAACCAGC+TGG | - | chr3_2:58787272-58787291 | Msa0413870:intron | 55.0% | |
CCTTCCAAGCTCAACCAGCT+GGG | - | chr3_2:58787273-58787292 | Msa0413870:intron | 55.0% | |
GAAACCCAGCTGGTTGAGCT+TGG | + | chr3_2:58787280-58787299 | None:intergenic | 55.0% | |
ATTTGCCAGTGACGACGACG+AGG | + | chr3_2:58787960-58787979 | None:intergenic | 55.0% | |
TCTCCGGTAAAAAGGACCGG+AGG | - | chr3_2:58788919-58788938 | Msa0413870:intron | 55.0% | |
CTCCGGTAAAAAGGACCGGA+GGG | - | chr3_2:58788920-58788939 | Msa0413870:intron | 55.0% | |
! | CTCCCTCCGGTCCTTTTTAC+CGG | + | chr3_2:58788818-58788837 | None:intergenic | 55.0% |
GTCAGATATTCCGGGACGGA+TGG | - | chr3_2:58789066-58789085 | Msa0413870:CDS | 55.0% | |
CATGATGTTCCTGCACCACG+TGG | - | chr3_2:58789728-58789747 | Msa0413870:CDS | 55.0% | |
TTTCCACTTCCACGTGGTGC+AGG | + | chr3_2:58789740-58789759 | None:intergenic | 55.0% | |
GAGTGGTTTCCACTTCCACG+TGG | + | chr3_2:58789746-58789765 | None:intergenic | 55.0% | |
CCCAGCTGGTTGAGCTTGGA+AGG | + | chr3_2:58787276-58787295 | None:intergenic | 60.0% | |
GTCTTCCTCGTCGTCGTCAC+TGG | - | chr3_2:58787952-58787971 | Msa0413870:intron | 60.0% | |
TCCGGGACGGATGGAGTAGT+AGG | - | chr3_2:58789075-58789094 | Msa0413870:CDS | 60.0% | |
GCCTACTACTCCATCCGTCC+CGG | + | chr3_2:58789079-58789098 | None:intergenic | 60.0% | |
GTTCCTGCACCACGTGGAAG+TGG | - | chr3_2:58789734-58789753 | Msa0413870:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 58786284 | 58790009 | 58786284 | ID=Msa0413870;Name=Msa0413870 |
chr3_2 | mRNA | 58786284 | 58790009 | 58786284 | ID=Msa0413870-mRNA-1;Parent=Msa0413870;Name=Msa0413870-mRNA-1;_AED=0.02;_eAED=0.02;_QI=162|1|0.8|1|1|1|5|0|511 |
chr3_2 | exon | 58786284 | 58786671 | 58786284 | ID=Msa0413870-mRNA-1:exon:12189;Parent=Msa0413870-mRNA-1 |
chr3_2 | exon | 58787765 | 58787929 | 58787765 | ID=Msa0413870-mRNA-1:exon:12188;Parent=Msa0413870-mRNA-1 |
chr3_2 | exon | 58788150 | 58788703 | 58788150 | ID=Msa0413870-mRNA-1:exon:12187;Parent=Msa0413870-mRNA-1 |
chr3_2 | exon | 58788968 | 58789141 | 58788968 | ID=Msa0413870-mRNA-1:exon:12186;Parent=Msa0413870-mRNA-1 |
chr3_2 | exon | 58789593 | 58790009 | 58789593 | ID=Msa0413870-mRNA-1:exon:12185;Parent=Msa0413870-mRNA-1 |
chr3_2 | five_prime_UTR | 58789848 | 58790009 | 58789848 | ID=Msa0413870-mRNA-1:five_prime_utr;Parent=Msa0413870-mRNA-1 |
chr3_2 | CDS | 58789593 | 58789847 | 58789593 | ID=Msa0413870-mRNA-1:cds;Parent=Msa0413870-mRNA-1 |
chr3_2 | CDS | 58788968 | 58789141 | 58788968 | ID=Msa0413870-mRNA-1:cds;Parent=Msa0413870-mRNA-1 |
chr3_2 | CDS | 58788150 | 58788703 | 58788150 | ID=Msa0413870-mRNA-1:cds;Parent=Msa0413870-mRNA-1 |
chr3_2 | CDS | 58787765 | 58787929 | 58787765 | ID=Msa0413870-mRNA-1:cds;Parent=Msa0413870-mRNA-1 |
chr3_2 | CDS | 58786284 | 58786671 | 58786284 | ID=Msa0413870-mRNA-1:cds;Parent=Msa0413870-mRNA-1 |
Gene Sequence |
Protein sequence |