AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0140630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0140630 MtrunA17_Chr3g0135361 94.971 696 23 2 1 692 1 688 0.0 1337
Msa0140630 MtrunA17_Chr1g0151881 48.451 710 292 14 1 692 60 713 0.0 542
Msa0140630 MtrunA17_Chr8g0341451 37.057 367 183 11 350 687 1 348 1.45e-46 169
Msa0140630 MtrunA17_Chr8g0341441 73.469 49 13 0 1 49 1 49 1.92e-16 82.0
Msa0140630 MtrunA17_Chr8g0341431 55.769 52 23 0 1 52 1 52 1.03e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0140630 AT2G25930.1 37.856 737 367 25 1 691 1 692 7.90e-103 329
Msa0140630 AT3G21320.1 31.726 394 182 12 307 692 224 538 3.58e-40 155

Find 204 sgRNAs with CRISPR-Local

Find 411 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAATATGGCTGCCGAAAA+TGG 0.133232 1_3:-74871381 Msa0140630:CDS
GTAAATGGCTGCTCCTTATT+TGG 0.173096 1_3:+74874066 None:intergenic
GCCTGACGAGTAAGTGTTTC+AGG 0.204027 1_3:+74874381 None:intergenic
TCTGCAGGCTCTAGGAATTT+TGG 0.206744 1_3:-74874183 Msa0140630:CDS
TATCCTGGGCCTGGATTTAC+AGG 0.257860 1_3:-74871270 Msa0140630:CDS
GAAGCTGCTGCTTTCATAAA+TGG 0.265876 1_3:+74871111 None:intergenic
AAAACATCGATGGAGGAAAT+TGG 0.268648 1_3:+74875322 None:intergenic
GGATTTACAGGAACAAATTA+TGG 0.283083 1_3:-74871258 Msa0140630:CDS
ATTTGACATAAGGAAGATTA+AGG 0.300750 1_3:-74875046 Msa0140630:five_prime_UTR
TTCTCTCTTCTTGAATTGAT+TGG 0.305188 1_3:+74870701 None:intergenic
TTTAAATTTCCACTATGTAT+AGG 0.320463 1_3:+74873745 None:intergenic
GGTTGACGAGGATGACTTTA+GGG 0.321745 1_3:-74874283 Msa0140630:CDS
GGCACTGAATATCATGATAC+TGG 0.325732 1_3:-74873778 Msa0140630:CDS
GGACTAGTTTGGTTTGCTAT+AGG 0.335922 1_3:+74873817 None:intergenic
TCAAATTGTAAGAGAAAGAT+AGG 0.336816 1_3:+74875401 None:intergenic
GTAAATCCAGGCCCAGGATA+TGG 0.337644 1_3:+74871273 None:intergenic
AAATCCACACCATGGAAATA+TGG 0.342107 1_3:-74871394 Msa0140630:CDS
AGGTTGACGAGGATGACTTT+AGG 0.344077 1_3:-74874284 Msa0140630:CDS
GACTAGTTTGGTTTGCTATA+GGG 0.345020 1_3:+74873818 None:intergenic
TCAAAGCAGGGAGAATTAAT+CGG 0.347948 1_3:-74874155 Msa0140630:CDS
AGCACCTCCTAGGAATAAAA+TGG 0.368651 1_3:-74874937 Msa0140630:CDS
GTTGCTCCATTTCTCTGAAC+AGG 0.373232 1_3:+74870979 None:intergenic
ACTGTATTTGGGTGGTGGGG+TGG 0.375585 1_3:+74874870 None:intergenic
TGAGTTGCATAGACTGATAA+AGG 0.377354 1_3:-74871791 Msa0140630:intron
TTCTCCATTTGATGTATCTC+TGG 0.383278 1_3:+74874038 None:intergenic
TCCGCAAGTAAGTCCAAATA+AGG 0.391188 1_3:-74874079 Msa0140630:CDS
GTATCTCTGGCAGAAGTAAA+TGG 0.395202 1_3:+74874051 None:intergenic
ACATGTAACCTAGGGAATAA+TGG 0.397904 1_3:+74874987 None:intergenic
GATGATGTTGTTGCAATAAT+AGG 0.400438 1_3:-74873658 Msa0140630:CDS
CAGATTCAGTTGCCGATCTT+CGG 0.401098 1_3:+74870737 None:intergenic
AATTTACCTGTTCAGAGAAA+TGG 0.403181 1_3:-74870985 Msa0140630:CDS
GCCCTTCGGAGCTCCTCCCT+CGG 0.409787 1_3:-74871226 Msa0140630:CDS
TATGTCTGGCATATCAAAAT+TGG 0.410243 1_3:-74870513 Msa0140630:three_prime_UTR
CCGAAAATGGGATGGGTCCC+TGG 0.411329 1_3:-74871368 Msa0140630:CDS
AAATTAGGGATTAGAGAGAA+AGG 0.424842 1_3:+74875428 None:intergenic
CAAAGCAGGGAGAATTAATC+GGG 0.426260 1_3:-74874154 Msa0140630:CDS
CAGGTCCAACAACTGATTGC+TGG 0.427752 1_3:-74871660 Msa0140630:CDS
TGTGATTACAATTTGACATA+AGG 0.429142 1_3:-74875056 Msa0140630:five_prime_UTR
GAGTCTCAATCCAATGGAAC+TGG 0.429520 1_3:-74873892 Msa0140630:CDS
TTATTCCTAGGAGGTGCTCT+TGG 0.430128 1_3:+74874942 None:intergenic
TAGCCTCGGATGGACTAGTT+TGG 0.434950 1_3:+74873806 None:intergenic
GGGAAGTAAGCATGGCTACC+TGG 0.435218 1_3:+74871150 None:intergenic
TGGTGTTTCAATCAGTCACC+TGG 0.437898 1_3:-74871348 Msa0140630:CDS
GGGGAACTGTATTTGGGTGG+TGG 0.438129 1_3:+74874865 None:intergenic
TTTGCACGCGTGCAGAGAAC+TGG 0.438820 1_3:+74871064 None:intergenic
CCTCCACCGGAGACTCCTCC+AGG 0.440221 1_3:-74871168 Msa0140630:CDS
CATAAATGGCATGCTGCCAT+AGG 0.444416 1_3:+74871125 None:intergenic
GCTACTCCCTCTGGTTCAAC+TGG 0.448375 1_3:+74870814 None:intergenic
GTATATATTCGCTCAAAGAT+TGG 0.450203 1_3:-74874255 Msa0140630:CDS
CTAGACACCGTACACTTGAA+TGG 0.450975 1_3:+74870635 None:intergenic
GTAGCTCAGTCTATTGAAAC+AGG 0.454146 1_3:-74870796 Msa0140630:CDS
GGAGGAGTCTCCGGTGGAGG+TGG 0.456593 1_3:+74871171 None:intergenic
ACAACATTTCAAAGATCTCC+AGG 0.463568 1_3:-74873714 Msa0140630:CDS
TGGCTACCTGGAGGAGTCTC+CGG 0.463732 1_3:+74871162 None:intergenic
TGTCTCCCTTGTAGATTCAA+TGG 0.465145 1_3:+74873855 None:intergenic
AATTAGGGATTAGAGAGAAA+GGG 0.466876 1_3:+74875429 None:intergenic
TATGGAGGATGTGGGCCCTT+CGG 0.469411 1_3:-74871240 Msa0140630:CDS
ATTATTGCAACAACATCATC+AGG 0.473171 1_3:+74873661 None:intergenic
GTTGCCGATCTTCGGTTATG+AGG 0.473495 1_3:+74870745 None:intergenic
ACTTTCATGAATCCTTCCTA+TGG 0.474615 1_3:-74871198 Msa0140630:CDS
CCCTTCGGAGCTCCTCCCTC+GGG 0.475712 1_3:-74871225 Msa0140630:CDS
GAAACATACAAGTACTTAAG+AGG 0.475855 1_3:+74870464 None:intergenic
TCCTGAAACACTTACTCGTC+AGG 0.478130 1_3:-74874382 Msa0140630:CDS
CTATGGAATGCCACCTCCAC+CGG 0.479421 1_3:-74871181 Msa0140630:CDS
CCAGATCTATTGTTTGAAGA+TGG 0.482307 1_3:-74871633 Msa0140630:CDS
CTGGGAAAGTCTCTTCCGGA+TGG 0.484929 1_3:-74871603 Msa0140630:CDS
ATTCCTTGTGTCATTTCACT+AGG 0.486062 1_3:+74870892 None:intergenic
AGCAGCTCACGTCAAGGTGA+TGG 0.486184 1_3:-74873940 Msa0140630:CDS
CCTGGAGGAGTCTCCGGTGG+AGG 0.489796 1_3:+74871168 None:intergenic
CTACCTGGCTCGAAGACGAC+GGG 0.491120 1_3:+74874844 None:intergenic
TATAAGCCATATCCTGGGCC+TGG 0.493111 1_3:-74871279 Msa0140630:CDS
TAATTTGTTCCTGTAAATCC+AGG 0.493238 1_3:+74871261 None:intergenic
GGGAACTGTATTTGGGTGGT+GGG 0.493443 1_3:+74874866 None:intergenic
GGAACTGTATTTGGGTGGTG+GGG 0.494923 1_3:+74874867 None:intergenic
CAGTGGTATGTAGATATGTC+TGG 0.495911 1_3:-74870527 Msa0140630:three_prime_UTR
GAAATATGGCTGCCGAAAAT+GGG 0.495984 1_3:-74871380 Msa0140630:CDS
ATCTTTGAGCGAATATATAC+AGG 0.497640 1_3:+74874258 None:intergenic
TGGTGTGGATTTCCAGCAAA+AGG 0.498051 1_3:+74871405 None:intergenic
CTAGTCTATAAGCCATATCC+TGG 0.499279 1_3:-74871285 Msa0140630:CDS
GGAACAAATTATGGAGGATG+TGG 0.499822 1_3:-74871249 Msa0140630:CDS
ATCACGTTGTCCAGTTCCAT+TGG 0.500565 1_3:+74873882 None:intergenic
CATGCTTACTTCCCTCCCTA+TGG 0.501584 1_3:-74871141 Msa0140630:CDS
TCTGGTTCAACTGGAACCAT+AGG 0.507234 1_3:+74870823 None:intergenic
GACGTGAGAAATGAGATTGA+TGG 0.508609 1_3:-74874105 Msa0140630:CDS
GGAAGACATAATTTCTCTCA+TGG 0.508641 1_3:+74874418 None:intergenic
GCACGTGTGGCATCGTGTAA+CGG 0.508686 1_3:-74870598 Msa0140630:three_prime_UTR
GAAGATTAAGGATGAAGAGA+GGG 0.510459 1_3:-74875034 Msa0140630:exon
GCGATCCAGCAATCAGTTGT+TGG 0.510917 1_3:+74871655 None:intergenic
TCTAGTGCTGTTTATTCGCA+TGG 0.511952 1_3:-74870663 Msa0140630:exon
TGATGGGGCCATTATTCCCT+AGG 0.516727 1_3:-74874995 Msa0140630:CDS
GGAAGATTAAGGATGAAGAG+AGG 0.520349 1_3:-74875035 Msa0140630:exon
CAAAGTCGTCATTTATCTGA+AGG 0.521419 1_3:-74871045 Msa0140630:CDS
ACCCGAGGGAGGAGCTCCGA+AGG 0.522593 1_3:+74871224 None:intergenic
CCATCTTCAAACAATAGATC+TGG 0.523258 1_3:+74871633 None:intergenic
ATTGAATCTACAAGGGAGAC+AGG 0.525653 1_3:-74873853 Msa0140630:CDS
TCTGCCAGAGATACATCAAA+TGG 0.525772 1_3:-74874042 Msa0140630:CDS
AGCTCACTTCTGCAGGCTCT+AGG 0.526785 1_3:-74874191 Msa0140630:CDS
TCCTTATTTGGACTTACTTG+CGG 0.527563 1_3:+74874078 None:intergenic
GCAGCCATATTTCCATGGTG+TGG 0.528591 1_3:+74871390 None:intergenic
GTCTATGCAACTCAAACACT+TGG 0.531022 1_3:+74871800 None:intergenic
CATATTTCTCGTCAATCAGA+AGG 0.532999 1_3:-74874351 Msa0140630:CDS
TCCTGTACTTTCTGCACGTG+TGG 0.538315 1_3:-74870611 Msa0140630:three_prime_UTR
CGGTGGAGGTGGCATTCCAT+AGG 0.539063 1_3:+74871182 None:intergenic
TTTCGGCAGCCATATTTCCA+TGG 0.540312 1_3:+74871385 None:intergenic
GTTTCAGGAGTTAAATGACC+AGG 0.541771 1_3:+74874396 None:intergenic
ATAGACTGAGCTACTCCCTC+TGG 0.543680 1_3:+74870805 None:intergenic
GAGGGCCAAGAGCACCTCCT+AGG 0.545147 1_3:-74874947 Msa0140630:CDS
GTATCACCAACATGTAACCT+AGG 0.546527 1_3:+74874978 None:intergenic
GAATGATGATGAGAAGGTGA+TGG 0.547160 1_3:-74875012 Msa0140630:CDS
GAGAGAAATTATGTCTTCCC+TGG 0.548632 1_3:-74874414 Msa0140630:CDS
CGAGCTGAGTCTCAATCCAA+TGG 0.549125 1_3:-74873898 Msa0140630:CDS
CCTTCAGAAGGTGACATCAC+AGG 0.549374 1_3:+74871309 None:intergenic
ACTGGAACCATAGGGAAAAG+AGG 0.549460 1_3:+74870832 None:intergenic
GTTCCTGTAAATCCAGGCCC+AGG 0.551731 1_3:+74871267 None:intergenic
CAGGGAGAATTAATCGGGAA+AGG 0.552192 1_3:-74874149 Msa0140630:CDS
AATGATGATGAGAAGGTGAT+GGG 0.553190 1_3:-74875011 Msa0140630:CDS
CATCTGCAACTCAAACTCCT+TGG 0.555622 1_3:+74870930 None:intergenic
AAATTGTAATCACACAACTA+AGG 0.556735 1_3:+74875065 None:intergenic
ATGCTTCCATTGAATCTACA+AGG 0.556972 1_3:-74873861 Msa0140630:CDS
AGTACTTGTATGTTTCTCAC+AGG 0.558038 1_3:-74870457 Msa0140630:three_prime_UTR
GGCAAGTTGAACCTTTGAGA+TGG 0.559072 1_3:+74874891 None:intergenic
GCAGCTCACGTCAAGGTGAT+GGG 0.559402 1_3:-74873939 Msa0140630:CDS
ACATGTTGGTGATACAGAGA+AGG 0.562605 1_3:-74874970 Msa0140630:CDS
GGAATTAACCACTGATGCCC+AGG 0.563486 1_3:+74871330 None:intergenic
ATAAATGGCATGCTGCCATA+GGG 0.566491 1_3:+74871126 None:intergenic
CATGTTGGTGATACAGAGAA+GGG 0.566831 1_3:-74874969 Msa0140630:CDS
TTCAGTGCCACCGATAGCCT+CGG 0.569722 1_3:+74873792 None:intergenic
AGGGAGAATTAATCGGGAAA+GGG 0.569775 1_3:-74874148 Msa0140630:CDS
CACCTTGGCTTGTCTTACTG+AGG 0.570500 1_3:+74874005 None:intergenic
AATTTAGTATTCCATCTCAA+AGG 0.570635 1_3:-74874902 Msa0140630:CDS
CTGGTTCAACTGGAACCATA+GGG 0.571255 1_3:+74870824 None:intergenic
CCTGTGATGTCACCTTCTGA+AGG 0.573554 1_3:-74871309 Msa0140630:CDS
GGTTGACAGATCTTCTACCC+TGG 0.574513 1_3:+74873696 None:intergenic
ATCAGTCACCTGGGCATCAG+TGG 0.578191 1_3:-74871338 Msa0140630:CDS
GGAGGATCCATTCAAGTGTA+CGG 0.579509 1_3:-74870642 Msa0140630:three_prime_UTR
ACTAGTCCATCCGAGGCTAT+CGG 0.583914 1_3:-74873802 Msa0140630:CDS
TTCGGAGCTCCTCCCTCGGG+TGG 0.585524 1_3:-74871222 Msa0140630:CDS
GAGAGGGAATGATGATGAGA+AGG 0.587504 1_3:-74875018 Msa0140630:CDS
TGGAATATGTTGTAAAACCT+CGG 0.589751 1_3:-74871557 Msa0140630:CDS
TATGGCTGCCGAAAATGGGA+TGG 0.595839 1_3:-74871376 Msa0140630:CDS
CACCTCAGTAAGACAAGCCA+AGG 0.598445 1_3:-74874007 Msa0140630:CDS
GAATATCATGATACTGGGAC+TGG 0.598737 1_3:-74873772 Msa0140630:CDS
ACAACTTGAACAGAGAAAGA+AGG 0.599965 1_3:-74874304 Msa0140630:CDS
CCCGAGGGAGGAGCTCCGAA+GGG 0.601600 1_3:+74871225 None:intergenic
CATAGGGAGGGAAGTAAGCA+TGG 0.605221 1_3:+74871142 None:intergenic
AAGTCGTCATTTATCTGAAG+GGG 0.607760 1_3:-74871043 Msa0140630:CDS
AAGGTGTGGAACTAGAAAAG+TGG 0.613409 1_3:+74871424 None:intergenic
ATGGCTGCCGAAAATGGGAT+GGG 0.616658 1_3:-74871375 Msa0140630:CDS
AAAGTCGTCATTTATCTGAA+GGG 0.617363 1_3:-74871044 Msa0140630:CDS
AGGTGACTGATTGAAACACC+AGG 0.618570 1_3:+74871350 None:intergenic
GGTGCCTCATAACCGAAGAT+CGG 0.618882 1_3:-74870749 Msa0140630:CDS
GGTGTTTCAATCAGTCACCT+GGG 0.619513 1_3:-74871347 Msa0140630:CDS
GGAGGTGGCATTCCATAGGA+AGG 0.620533 1_3:+74871186 None:intergenic
ATATTTCTCGTCAATCAGAA+GGG 0.621054 1_3:-74874350 Msa0140630:CDS
TATCACCAACATGTAACCTA+GGG 0.623081 1_3:+74874979 None:intergenic
ACTGGCAGTCCTATACATAG+TGG 0.623087 1_3:-74873754 Msa0140630:CDS
CTGTGATGTCACCTTCTGAA+GGG 0.623705 1_3:-74871308 Msa0140630:CDS
TTTACAGGAACAAATTATGG+AGG 0.624863 1_3:-74871255 Msa0140630:CDS
TTATTCCCTAGGTTACATGT+TGG 0.625229 1_3:-74874984 Msa0140630:CDS
CTACCTGGAGGAGTCTCCGG+TGG 0.626384 1_3:+74871165 None:intergenic
GCACTGAATATCATGATACT+GGG 0.627685 1_3:-74873777 Msa0140630:CDS
ACTACCTGGCTCGAAGACGA+CGG 0.629583 1_3:+74874843 None:intergenic
GCCACACGTGCAGAAAGTAC+AGG 0.629916 1_3:+74870610 None:intergenic
ATGACACAAGGAATGAGCAC+AGG 0.630925 1_3:-74870883 Msa0140630:CDS
AGCACAGGACAAGTTGCTGA+AGG 0.630951 1_3:-74870868 Msa0140630:CDS
TTGGTGATACAGAGAAGGGA+GGG 0.631275 1_3:-74874965 Msa0140630:CDS
GTGCCACCGATAGCCTCGGA+TGG 0.632897 1_3:+74873796 None:intergenic
TAGTCTATAAGCCATATCCT+GGG 0.633429 1_3:-74871284 Msa0140630:CDS
ATGGCATGCTGCCATAGGGA+GGG 0.634287 1_3:+74871130 None:intergenic
AATGGCATGCTGCCATAGGG+AGG 0.634987 1_3:+74871129 None:intergenic
CGTCATTTATCTGAAGGGGA+AGG 0.635430 1_3:-74871039 Msa0140630:CDS
TACCTGGCTCGAAGACGACG+GGG 0.638883 1_3:+74874845 None:intergenic
AAACTTAGCAGCTCACGTCA+AGG 0.639202 1_3:-74873946 Msa0140630:CDS
TGAAAACGTAAATCAAAACA+TGG 0.643766 1_3:-74871505 Msa0140630:CDS
TTATTTGGACTTACTTGCGG+AGG 0.646878 1_3:+74874081 None:intergenic
TGGATTTCCAGCAAAAGGTG+TGG 0.646988 1_3:+74871410 None:intergenic
GAACAAATTATGGAGGATGT+GGG 0.647908 1_3:-74871248 Msa0140630:CDS
TTCATGAAAGTACCACCCGA+GGG 0.650195 1_3:+74871210 None:intergenic
CCACTGTGCTGAAAGTAACA+AGG 0.650729 1_3:+74870544 None:intergenic
TTTCAGGAGTTAAATGACCA+GGG 0.652082 1_3:+74874397 None:intergenic
AAAGGGATCTAAACAATCTG+CGG 0.652139 1_3:-74874131 Msa0140630:CDS
TTTGCTGGAAATCCACACCA+TGG 0.653009 1_3:-74871402 Msa0140630:CDS
TATTTCTCGTCAATCAGAAG+GGG 0.655113 1_3:-74874349 Msa0140630:CDS
TGTTCTGCAGAGAATGCTGT+TGG 0.655449 1_3:-74871480 Msa0140630:CDS
ATGAAAGTACCACCCGAGGG+AGG 0.660732 1_3:+74871213 None:intergenic
ATGGTTCCAGTTGAACCAGA+GGG 0.662127 1_3:-74870820 Msa0140630:CDS
CAACATTTCAAAGATCTCCA+GGG 0.663807 1_3:-74873713 Msa0140630:CDS
ATTCATGAAAGTACCACCCG+AGG 0.666808 1_3:+74871209 None:intergenic
TATGGTTCCAGTTGAACCAG+AGG 0.667512 1_3:-74870821 Msa0140630:CDS
TTATAGACTAGCCCTTCAGA+AGG 0.669816 1_3:+74871297 None:intergenic
AGTGCTGTTTATTCGCATGG+AGG 0.671256 1_3:-74870660 Msa0140630:three_prime_UTR
CCTTGTTACTTTCAGCACAG+TGG 0.672231 1_3:-74870544 Msa0140630:three_prime_UTR
ATGATGATGAGAAGGTGATG+GGG 0.672612 1_3:-74875010 Msa0140630:CDS
GTTGGTGATACAGAGAAGGG+AGG 0.680561 1_3:-74874966 Msa0140630:CDS
AGTCCATCCGAGGCTATCGG+TGG 0.683945 1_3:-74873799 Msa0140630:CDS
AAACCAAACTAGTCCATCCG+AGG 0.689681 1_3:-74873809 Msa0140630:CDS
TGCTTCCATTGAATCTACAA+GGG 0.692849 1_3:-74873860 Msa0140630:CDS
ACCTGGCTCGAAGACGACGG+GGG 0.694887 1_3:+74874846 None:intergenic
ACAAACTCGAGTTATCAAAG+TGG 0.700487 1_3:-74870770 Msa0140630:CDS
AGTCCTAGTGAAATGACACA+AGG 0.702523 1_3:-74870895 Msa0140630:CDS
ACAGAGAAAGAAGGTTGACG+AGG 0.723789 1_3:-74874295 Msa0140630:CDS
TATGCATTGTCAGAGAACCA+AGG 0.727433 1_3:-74870947 Msa0140630:CDS
GGTGACTGATTGAAACACCA+GGG 0.728640 1_3:+74871351 None:intergenic
AAGTAAGCATGGCTACCTGG+AGG 0.730950 1_3:+74871153 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAGTAATGATAATAATT+AGG + chr1_3:74871099-74871118 None:intergenic 10.0%
!!! TAATTATATTTTATTTAAGC+AGG - chr1_3:74874212-74874231 Msa0140630:CDS 10.0%
!!! TATAATCACTTTTTATGTTT+TGG - chr1_3:74870743-74870762 Msa0140630:CDS 15.0%
!!! TTATATGAATGTTAGAATTT+TGG - chr1_3:74872432-74872451 Msa0140630:intron 15.0%
!! ATAAAAAAACCAAATTAGAA+GGG + chr1_3:74872871-74872890 None:intergenic 15.0%
!! AATAAAAAAACCAAATTAGA+AGG + chr1_3:74872872-74872891 None:intergenic 15.0%
!! ACATTAAATACTCATTAAAT+GGG + chr1_3:74873434-74873453 None:intergenic 15.0%
!! AACATTAAATACTCATTAAA+TGG + chr1_3:74873435-74873454 None:intergenic 15.0%
!!! TTTGAATTTTATATGTTTTC+TGG - chr1_3:74873634-74873653 Msa0140630:CDS 15.0%
!! AAGATAACATGATTAATATT+TGG + chr1_3:74873736-74873755 None:intergenic 15.0%
!! CAATCTAAATAAATATCATA+GGG + chr1_3:74873868-74873887 None:intergenic 15.0%
!! AAACAAAAAAAAAACATCGA+TGG + chr1_3:74870582-74870601 None:intergenic 20.0%
!!! AAAGTTTAGATTTTGTGAAT+TGG - chr1_3:74870680-74870699 Msa0140630:exon 20.0%
!!! AAGTTTAGATTTTGTGAATT+GGG - chr1_3:74870681-74870700 Msa0140630:CDS 20.0%
!! AAATTTCAAATCGTTTGATT+TGG - chr1_3:74871142-74871161 Msa0140630:CDS 20.0%
!! AGAAATAGCTTATTCATAAA+CGG - chr1_3:74871316-74871335 Msa0140630:CDS 20.0%
!!! AATTTAAAATCCAAACAATC+AGG + chr1_3:74871441-74871460 None:intergenic 20.0%
!! TTTAAATTTCCACTATGTAT+AGG + chr1_3:74872149-74872168 None:intergenic 20.0%
!! TTTAAATAGGAATCTTTGAA+AGG - chr1_3:74872337-74872356 Msa0140630:intron 20.0%
!! TATCATAAAACATCTATTGA+GGG + chr1_3:74873203-74873222 None:intergenic 20.0%
!! CCAATCTAAATAAATATCAT+AGG + chr1_3:74873869-74873888 None:intergenic 20.0%
!! CCTATGATATTTATTTAGAT+TGG - chr1_3:74873866-74873885 Msa0140630:CDS 20.0%
!! GTAGTTTGATGTTTATAAAT+TGG - chr1_3:74873942-74873961 Msa0140630:CDS 20.0%
!!! AAAATGGAAAATAAAGCATT+TGG + chr1_3:74873994-74874013 None:intergenic 20.0%
! GAAAGATAGGAGAAAAATTA+GGG + chr1_3:74870480-74870499 None:intergenic 25.0%
! AGAAAGATAGGAGAAAAATT+AGG + chr1_3:74870481-74870500 None:intergenic 25.0%
! TCAAATTGTAAGAGAAAGAT+AGG + chr1_3:74870493-74870512 None:intergenic 25.0%
! AAACAAAAATCCGAGAAATT+CGG + chr1_3:74870546-74870565 None:intergenic 25.0%
! AAATTGTAATCACACAACTA+AGG + chr1_3:74870829-74870848 None:intergenic 25.0%
! TGTGATTACAATTTGACATA+AGG - chr1_3:74870835-74870854 Msa0140630:CDS 25.0%
! ATTTGACATAAGGAAGATTA+AGG - chr1_3:74870845-74870864 Msa0140630:CDS 25.0%
! AATTTAGTATTCCATCTCAA+AGG - chr1_3:74870989-74871008 Msa0140630:CDS 25.0%
!! AACATATTCTAAAAACTACC+TGG + chr1_3:74871065-74871084 None:intergenic 25.0%
! TATAAGCTGTTTATCTTAAC+AGG - chr1_3:74871353-74871372 Msa0140630:CDS 25.0%
! ATAAGCTGTTTATCTTAACA+GGG - chr1_3:74871354-74871373 Msa0140630:CDS 25.0%
!!! TTCTAGTTTTATGGTTGTTT+GGG - chr1_3:74871395-74871414 Msa0140630:CDS 25.0%
!! TTTTTCTTTTCCTGATTGTT+TGG - chr1_3:74871428-74871447 Msa0140630:CDS 25.0%
!! TTGTTTGGATTTTAAATTGC+AGG - chr1_3:74871443-74871462 Msa0140630:CDS 25.0%
!! TGTTTGGATTTTAAATTGCA+GGG - chr1_3:74871444-74871463 Msa0140630:CDS 25.0%
!!! AATTTTGGTTTTTTCAAAGC+AGG - chr1_3:74871723-74871742 Msa0140630:intron 25.0%
!!! ATTTTGGTTTTTTCAAAGCA+GGG - chr1_3:74871724-74871743 Msa0140630:intron 25.0%
! TAATAGGTCAAAAACAATTC+TGG - chr1_3:74872249-74872268 Msa0140630:intron 25.0%
!!! AGCAAAATTACTACTTTTGA+TGG - chr1_3:74872515-74872534 Msa0140630:intron 25.0%
!! TTTGATTATCCTTGTTATGA+TGG - chr1_3:74872557-74872576 Msa0140630:intron 25.0%
!! TGCATAAAAGATGCTTTAAA+AGG + chr1_3:74872749-74872768 None:intergenic 25.0%
! GGATAATTACATTTCAATCA+AGG - chr1_3:74872798-74872817 Msa0140630:intron 25.0%
!!! AGTCCTTACTAATGTTTTAA+TGG - chr1_3:74872909-74872928 Msa0140630:intron 25.0%
! TCACCATTAAAACATTAGTA+AGG + chr1_3:74872915-74872934 None:intergenic 25.0%
!!! AATGTTTTAATGGTGAGTAA+TGG - chr1_3:74872919-74872938 Msa0140630:intron 25.0%
! GCTTTAATATTATACCATGT+TGG - chr1_3:74872959-74872978 Msa0140630:intron 25.0%
!! TTTTTAATGTATTCCTGTCT+TGG - chr1_3:74873038-74873057 Msa0140630:intron 25.0%
! CTATCATAAAACATCTATTG+AGG + chr1_3:74873204-74873223 None:intergenic 25.0%
!!! TTCTGTGTTTTGAAACATTT+TGG - chr1_3:74873260-74873279 Msa0140630:intron 25.0%
!!! TCTGTGTTTTGAAACATTTT+GGG - chr1_3:74873261-74873280 Msa0140630:intron 25.0%
!! TTGTTTTCATTTAAAAGCAG+TGG - chr1_3:74873477-74873496 Msa0140630:intron 25.0%
! GAAAAGATTATAATGAGACT+CGG - chr1_3:74873499-74873518 Msa0140630:intron 25.0%
!!! TGGTATAAGCCATATTTTAA+TGG - chr1_3:74873654-74873673 Msa0140630:CDS 25.0%
! CATGGAATACCATTAAAATA+TGG + chr1_3:74873666-74873685 None:intergenic 25.0%
! GGAACTAAAAAAGATAATGT+TGG + chr1_3:74873973-74873992 None:intergenic 25.0%
! GACAGACAATCAAAATAAAA+TGG + chr1_3:74874010-74874029 None:intergenic 25.0%
! ATCATTACAGACAGAATTAA+CGG + chr1_3:74874192-74874211 None:intergenic 25.0%
! TGAAAACGTAAATCAAAACA+TGG - chr1_3:74874386-74874405 Msa0140630:CDS 25.0%
! TTAGAGAGAAAGGGTTTTTA+GGG + chr1_3:74870456-74870475 None:intergenic 30.0%
! ATTAGAGAGAAAGGGTTTTT+AGG + chr1_3:74870457-74870476 None:intergenic 30.0%
AATTAGGGATTAGAGAGAAA+GGG + chr1_3:74870465-74870484 None:intergenic 30.0%
AAATTAGGGATTAGAGAGAA+AGG + chr1_3:74870466-74870485 None:intergenic 30.0%
CAAAAAAAAAACATCGATGG+AGG + chr1_3:74870579-74870598 None:intergenic 30.0%
! AATCTAAACTTTTCCCAACT+GGG + chr1_3:74870672-74870691 None:intergenic 30.0%
! AAATCTAAACTTTTCCCAAC+TGG + chr1_3:74870673-74870692 None:intergenic 30.0%
!! AATCGTTTGATTTGGCAATT+AGG - chr1_3:74871150-74871169 Msa0140630:CDS 30.0%
!! ATCGTTTGATTTGGCAATTA+GGG - chr1_3:74871151-74871170 Msa0140630:CDS 30.0%
!!! GTTCTAGTTTTATGGTTGTT+TGG - chr1_3:74871394-74871413 Msa0140630:CDS 30.0%
! GTTTGGATTTTAAATTGCAG+GGG - chr1_3:74871445-74871464 Msa0140630:CDS 30.0%
! TTTGGATTTTAAATTGCAGG+GGG - chr1_3:74871446-74871465 Msa0140630:CDS 30.0%
ATATTTCTCGTCAATCAGAA+GGG - chr1_3:74871541-74871560 Msa0140630:CDS 30.0%
ATCTTTGAGCGAATATATAC+AGG + chr1_3:74871636-74871655 None:intergenic 30.0%
GTATATATTCGCTCAAAGAT+TGG - chr1_3:74871636-74871655 Msa0140630:CDS 30.0%
!! AAAAGTCATGAGAGTTTTGA+TGG - chr1_3:74871672-74871691 Msa0140630:intron 30.0%
!! AAAGTCATGAGAGTTTTGAT+GGG - chr1_3:74871673-74871692 Msa0140630:intron 30.0%
! ATCATCAGGAGAAATTTTCA+GGG + chr1_3:74872219-74872238 None:intergenic 30.0%
ATTATTGCAACAACATCATC+AGG + chr1_3:74872233-74872252 None:intergenic 30.0%
GATGATGTTGTTGCAATAAT+AGG - chr1_3:74872233-74872252 Msa0140630:intron 30.0%
TGTGAACTCTATTAATTGCA+TGG - chr1_3:74872384-74872403 Msa0140630:intron 30.0%
TATTAATTGCATGGAACTGA+AGG - chr1_3:74872393-74872412 Msa0140630:intron 30.0%
! CAAATTAAGGCTTCTGTTTT+TGG + chr1_3:74872458-74872477 None:intergenic 30.0%
!! AAGCCTTAATTTGTTTCACA+GGG - chr1_3:74872465-74872484 Msa0140630:intron 30.0%
TTACCCTGTGAAACAAATTA+AGG + chr1_3:74872471-74872490 None:intergenic 30.0%
AACAAGGATAATCAAATCAG+CGG + chr1_3:74872553-74872572 None:intergenic 30.0%
GAAAAATTGCACTATCAGAA+GGG + chr1_3:74872720-74872739 None:intergenic 30.0%
AGAAAAATTGCACTATCAGA+AGG + chr1_3:74872721-74872740 None:intergenic 30.0%
AAAGGAGATTTAATAGTCCT+GGG - chr1_3:74872843-74872862 Msa0140630:intron 30.0%
AATATTATACCATGTTGGAG+TGG - chr1_3:74872964-74872983 Msa0140630:intron 30.0%
! TTGATGATATGAAATCTGCA+GGG + chr1_3:74873339-74873358 None:intergenic 30.0%
! ATTGATGATATGAAATCTGC+AGG + chr1_3:74873340-74873359 None:intergenic 30.0%
CATTAAATGGGAAGATTACT+AGG + chr1_3:74873422-74873441 None:intergenic 30.0%
! ACTTTAAGGAAGAAAACTCA+TGG + chr1_3:74873684-74873703 None:intergenic 30.0%
ATATCATAGGGATCAAAAGA+GGG + chr1_3:74873856-74873875 None:intergenic 30.0%
AATATCATAGGGATCAAAAG+AGG + chr1_3:74873857-74873876 None:intergenic 30.0%
CATCAAACTACAAAAATCGA+AGG + chr1_3:74873933-74873952 None:intergenic 30.0%
TTGTACTAGTAGTCCAAAAT+GGG - chr1_3:74874151-74874170 Msa0140630:CDS 30.0%
TGGAATATGTTGTAAAACCT+CGG - chr1_3:74874334-74874353 Msa0140630:CDS 30.0%
TCTATTTCGTCAGTGAAAAA+TGG - chr1_3:74874441-74874460 Msa0140630:intron 30.0%
CTATTTCGTCAGTGAAAAAT+GGG - chr1_3:74874442-74874461 Msa0140630:intron 30.0%
!! TAATTTGTTCCTGTAAATCC+AGG + chr1_3:74874633-74874652 None:intergenic 30.0%
GGATTTACAGGAACAAATTA+TGG - chr1_3:74874633-74874652 Msa0140630:intron 30.0%
TTTACAGGAACAAATTATGG+AGG - chr1_3:74874636-74874655 Msa0140630:intron 30.0%
AAAGTCGTCATTTATCTGAA+GGG - chr1_3:74874847-74874866 Msa0140630:intron 30.0%
TTCTCTCTTCTTGAATTGAT+TGG + chr1_3:74875193-74875212 None:intergenic 30.0%
TATGTCTGGCATATCAAAAT+TGG - chr1_3:74875378-74875397 Msa0140630:five_prime_UTR 30.0%
GAAACATACAAGTACTTAAG+AGG + chr1_3:74875430-74875449 None:intergenic 30.0%
AGCAAAAAAGGGGTTATGAT+GGG + chr1_3:74870523-74870542 None:intergenic 35.0%
AGAAATTCGGAGCAAAAAAG+GGG + chr1_3:74870533-74870552 None:intergenic 35.0%
GAGAAATTCGGAGCAAAAAA+GGG + chr1_3:74870534-74870553 None:intergenic 35.0%
!!! CTTTTTTGCTCCGAATTTCT+CGG - chr1_3:74870533-74870552 Msa0140630:three_prime_UTR 35.0%
AAAACATCGATGGAGGAAAT+TGG + chr1_3:74870572-74870591 None:intergenic 35.0%
! ATGTTTTTCTGATACCCAGT+TGG - chr1_3:74870655-74870674 Msa0140630:three_prime_UTR 35.0%
! TGTTTTTCTGATACCCAGTT+GGG - chr1_3:74870656-74870675 Msa0140630:three_prime_UTR 35.0%
GAAGATTAAGGATGAAGAGA+GGG - chr1_3:74870857-74870876 Msa0140630:CDS 35.0%
! AATGATGATGAGAAGGTGAT+GGG - chr1_3:74870880-74870899 Msa0140630:CDS 35.0%
ACATGTAACCTAGGGAATAA+TGG + chr1_3:74870907-74870926 None:intergenic 35.0%
TTATTCCCTAGGTTACATGT+TGG - chr1_3:74870907-74870926 Msa0140630:CDS 35.0%
TATCACCAACATGTAACCTA+GGG + chr1_3:74870915-74870934 None:intergenic 35.0%
!! TAGAGAGCCATTTTATTCCT+AGG + chr1_3:74870964-74870983 None:intergenic 35.0%
TTTATCTTAACAGGGCCTTA+GGG - chr1_3:74871362-74871381 Msa0140630:CDS 35.0%
!!! GTGTGTGTGTTCTAGTTTTA+TGG - chr1_3:74871386-74871405 Msa0140630:CDS 35.0%
GGAAGACATAATTTCTCTCA+TGG + chr1_3:74871476-74871495 None:intergenic 35.0%
TTTCAGGAGTTAAATGACCA+GGG + chr1_3:74871497-74871516 None:intergenic 35.0%
CATATTTCTCGTCAATCAGA+AGG - chr1_3:74871540-74871559 Msa0140630:CDS 35.0%
TATTTCTCGTCAATCAGAAG+GGG - chr1_3:74871542-74871561 Msa0140630:CDS 35.0%
ACAACTTGAACAGAGAAAGA+AGG - chr1_3:74871587-74871606 Msa0140630:CDS 35.0%
TCAAAGCAGGGAGAATTAAT+CGG - chr1_3:74871736-74871755 Msa0140630:intron 35.0%
AAAGGGATCTAAACAATCTG+CGG - chr1_3:74871760-74871779 Msa0140630:intron 35.0%
! TCCTTATTTGGACTTACTTG+CGG + chr1_3:74871816-74871835 None:intergenic 35.0%
TTCTCCATTTGATGTATCTC+TGG + chr1_3:74871856-74871875 None:intergenic 35.0%
!!! CTGTTGATTTTGAATCACCT+TGG + chr1_3:74871904-74871923 None:intergenic 35.0%
ATGCTTCCATTGAATCTACA+AGG - chr1_3:74872030-74872049 Msa0140630:intron 35.0%
TGCTTCCATTGAATCTACAA+GGG - chr1_3:74872031-74872050 Msa0140630:intron 35.0%
!! GACTAGTTTGGTTTGCTATA+GGG + chr1_3:74872076-74872095 None:intergenic 35.0%
GCACTGAATATCATGATACT+GGG - chr1_3:74872114-74872133 Msa0140630:intron 35.0%
ACAACATTTCAAAGATCTCC+AGG - chr1_3:74872177-74872196 Msa0140630:intron 35.0%
CAACATTTCAAAGATCTCCA+GGG - chr1_3:74872178-74872197 Msa0140630:intron 35.0%
! CATCATCAGGAGAAATTTTC+AGG + chr1_3:74872220-74872239 None:intergenic 35.0%
!! TTACTTGGCAATTGCTTTTC+TGG + chr1_3:74872279-74872298 None:intergenic 35.0%
! TTGTTGCTTGTCAATAGCAT+CGG - chr1_3:74872302-74872321 Msa0140630:intron 35.0%
!! GAAGCCTTAATTTGTTTCAC+AGG - chr1_3:74872464-74872483 Msa0140630:intron 35.0%
! TCCTTGTTATGATGGTTTGT+TGG - chr1_3:74872565-74872584 Msa0140630:intron 35.0%
GGAAATATACGAAAGAAGGT+AGG + chr1_3:74872596-74872615 None:intergenic 35.0%
TGCAGGAAATATACGAAAGA+AGG + chr1_3:74872600-74872619 None:intergenic 35.0%
ATCTTTCTTTAGCCTATGGT+TGG - chr1_3:74872619-74872638 Msa0140630:intron 35.0%
TCTTTCTTTAGCCTATGGTT+GGG - chr1_3:74872620-74872639 Msa0140630:intron 35.0%
AAATTTGCAAACCCAACCAT+AGG + chr1_3:74872634-74872653 None:intergenic 35.0%
GTTGGGTTTGCAAATTTGTA+AGG - chr1_3:74872637-74872656 Msa0140630:intron 35.0%
TGTAAGGAAAATTCCCTTAG+AGG - chr1_3:74872653-74872672 Msa0140630:intron 35.0%
GTAAGGAAAATTCCCTTAGA+GGG - chr1_3:74872654-74872673 Msa0140630:intron 35.0%
TGCATCCTTAACTAAATACC+AGG - chr1_3:74872765-74872784 Msa0140630:intron 35.0%
GCATCCTTAACTAAATACCA+GGG - chr1_3:74872766-74872785 Msa0140630:intron 35.0%
ACATCCCTGGTATTTAGTTA+AGG + chr1_3:74872773-74872792 None:intergenic 35.0%
CAATCAAGGAGTTGTATGTA+TGG - chr1_3:74872812-74872831 Msa0140630:intron 35.0%
!! GTATGTATGGCTTTGAAGAA+AGG - chr1_3:74872825-74872844 Msa0140630:intron 35.0%
GAAAGGAGATTTAATAGTCC+TGG - chr1_3:74872842-74872861 Msa0140630:intron 35.0%
ACCAAGTCACTACATAAGTT+GGG + chr1_3:74873239-74873258 None:intergenic 35.0%
AACCAAGTCACTACATAAGT+TGG + chr1_3:74873240-74873259 None:intergenic 35.0%
TGGGAAGATTACTAGGAATT+AGG + chr1_3:74873415-74873434 None:intergenic 35.0%
AAGATTATAATGAGACTCGG+TGG - chr1_3:74873502-74873521 Msa0140630:intron 35.0%
!! AGTTTTAGTGTTCCCCTTAT+TGG - chr1_3:74873548-74873567 Msa0140630:intron 35.0%
TTGCGAGATACAACCAATAA+GGG + chr1_3:74873564-74873583 None:intergenic 35.0%
ATTGCGAGATACAACCAATA+AGG + chr1_3:74873565-74873584 None:intergenic 35.0%
AGTTTCTTTGTCAGAGGATT+GGG + chr1_3:74873604-74873623 None:intergenic 35.0%
CTCAGAGAGTTGAAACTTTA+AGG + chr1_3:74873698-74873717 None:intergenic 35.0%
CTTAAAGTTTCAACTCTCTG+AGG - chr1_3:74873696-74873715 Msa0140630:CDS 35.0%
TGAGTTGCATAGACTGATAA+AGG - chr1_3:74874100-74874119 Msa0140630:CDS 35.0%
CTTGTACTAGTAGTCCAAAA+TGG - chr1_3:74874150-74874169 Msa0140630:CDS 35.0%
TGTACTAGTAGTCCAAAATG+GGG - chr1_3:74874152-74874171 Msa0140630:CDS 35.0%
CCATCTTCAAACAATAGATC+TGG + chr1_3:74874261-74874280 None:intergenic 35.0%
CCAGATCTATTGTTTGAAGA+TGG - chr1_3:74874258-74874277 Msa0140630:CDS 35.0%
! TTTGAAGATGGTGCTTTTCT+GGG - chr1_3:74874270-74874289 Msa0140630:CDS 35.0%
!! TTTTTAGGAGTAGATCCATC+CGG + chr1_3:74874306-74874325 None:intergenic 35.0%
!!! TATTCCAGTGCGAGTTTTTT+AGG + chr1_3:74874321-74874340 None:intergenic 35.0%
AAATCCACACCATGGAAATA+TGG - chr1_3:74874497-74874516 Msa0140630:intron 35.0%
TAGTCTATAAGCCATATCCT+GGG - chr1_3:74874607-74874626 Msa0140630:intron 35.0%
GAACAAATTATGGAGGATGT+GGG - chr1_3:74874643-74874662 Msa0140630:intron 35.0%
ACTTTCATGAATCCTTCCTA+TGG - chr1_3:74874693-74874712 Msa0140630:intron 35.0%
CAAAGTCGTCATTTATCTGA+AGG - chr1_3:74874846-74874865 Msa0140630:intron 35.0%
AAGTCGTCATTTATCTGAAG+GGG - chr1_3:74874848-74874867 Msa0140630:CDS 35.0%
!! ATTCCTTGTGTCATTTCACT+AGG + chr1_3:74875002-74875021 None:intergenic 35.0%
ACAAACTCGAGTTATCAAAG+TGG - chr1_3:74875121-74875140 Msa0140630:five_prime_UTR 35.0%
AGTACTTGTATGTTTCTCAC+AGG - chr1_3:74875434-74875453 Msa0140630:five_prime_UTR 35.0%
! AAAAAGGGGTTATGATGGGA+AGG + chr1_3:74870519-74870538 None:intergenic 40.0%
GAGCAAAAAAGGGGTTATGA+TGG + chr1_3:74870524-74870543 None:intergenic 40.0%
CGAGAAATTCGGAGCAAAAA+AGG + chr1_3:74870535-74870554 None:intergenic 40.0%
GGAAGATTAAGGATGAAGAG+AGG - chr1_3:74870856-74870875 Msa0140630:CDS 40.0%
! GAATGATGATGAGAAGGTGA+TGG - chr1_3:74870879-74870898 Msa0140630:CDS 40.0%
! ATGATGATGAGAAGGTGATG+GGG - chr1_3:74870881-74870900 Msa0140630:CDS 40.0%
GTATCACCAACATGTAACCT+AGG + chr1_3:74870916-74870935 None:intergenic 40.0%
!! ACATGTTGGTGATACAGAGA+AGG - chr1_3:74870921-74870940 Msa0140630:CDS 40.0%
!! CATGTTGGTGATACAGAGAA+GGG - chr1_3:74870922-74870941 Msa0140630:CDS 40.0%
AGCACCTCCTAGGAATAAAA+TGG - chr1_3:74870954-74870973 Msa0140630:CDS 40.0%
!! AGAGCCATTTTATTCCTAGG+AGG + chr1_3:74870961-74870980 None:intergenic 40.0%
CCAAACAGTGTGAATCCAAA+CGG + chr1_3:74871178-74871197 None:intergenic 40.0%
CGTTTGGATTCACACTGTTT+GGG - chr1_3:74871176-74871195 Msa0140630:CDS 40.0%
AAGCTATCGTGAAGAGCTTA+CGG + chr1_3:74871238-74871257 None:intergenic 40.0%
GTTTATCTTAACAGGGCCTT+AGG - chr1_3:74871361-74871380 Msa0140630:CDS 40.0%
GAGAGAAATTATGTCTTCCC+TGG - chr1_3:74871477-74871496 Msa0140630:CDS 40.0%
GTTTCAGGAGTTAAATGACC+AGG + chr1_3:74871498-74871517 None:intergenic 40.0%
CAAAGCAGGGAGAATTAATC+GGG - chr1_3:74871737-74871756 Msa0140630:intron 40.0%
AGGGAGAATTAATCGGGAAA+GGG - chr1_3:74871743-74871762 Msa0140630:intron 40.0%
GACGTGAGAAATGAGATTGA+TGG - chr1_3:74871786-74871805 Msa0140630:intron 40.0%
TTATTTGGACTTACTTGCGG+AGG + chr1_3:74871813-74871832 None:intergenic 40.0%
TCCGCAAGTAAGTCCAAATA+AGG - chr1_3:74871812-74871831 Msa0140630:CDS 40.0%
GTAAATGGCTGCTCCTTATT+TGG + chr1_3:74871828-74871847 None:intergenic 40.0%
GTATCTCTGGCAGAAGTAAA+TGG + chr1_3:74871843-74871862 None:intergenic 40.0%
TCTGCCAGAGATACATCAAA+TGG - chr1_3:74871849-74871868 Msa0140630:intron 40.0%
TGTCTCCCTTGTAGATTCAA+TGG + chr1_3:74872039-74872058 None:intergenic 40.0%
ATTGAATCTACAAGGGAGAC+AGG - chr1_3:74872038-74872057 Msa0140630:intron 40.0%
!! GGACTAGTTTGGTTTGCTAT+AGG + chr1_3:74872077-74872096 None:intergenic 40.0%
! GGCACTGAATATCATGATAC+TGG - chr1_3:74872113-74872132 Msa0140630:intron 40.0%
GAATATCATGATACTGGGAC+TGG - chr1_3:74872119-74872138 Msa0140630:intron 40.0%
GACAAGCAACAAGACTTACT+TGG + chr1_3:74872294-74872313 None:intergenic 40.0%
! GGAATCTTTGAAAGGCAATC+TGG - chr1_3:74872345-74872364 Msa0140630:intron 40.0%
GCCAACAAACCATCATAACA+AGG + chr1_3:74872569-74872588 None:intergenic 40.0%
CATAGGCTAAAGAAAGATGC+AGG + chr1_3:74872617-74872636 None:intergenic 40.0%
CTGCATCTTTCTTTAGCCTA+TGG - chr1_3:74872615-74872634 Msa0140630:intron 40.0%
CCTACATTTCTTCCCTCTAA+GGG + chr1_3:74872669-74872688 None:intergenic 40.0%
TCCTACATTTCTTCCCTCTA+AGG + chr1_3:74872670-74872689 None:intergenic 40.0%
! TTCCTTACAGTCACGTTTTC+TGG + chr1_3:74872693-74872712 None:intergenic 40.0%
TAAATACCAGGGATGTGAGT+TGG - chr1_3:74872777-74872796 Msa0140630:intron 40.0%
AATTATCCAACTCACATCCC+TGG + chr1_3:74872786-74872805 None:intergenic 40.0%
TGGTGAGTAATGGTTACAAC+AGG - chr1_3:74872929-74872948 Msa0140630:intron 40.0%
GGTGAGTAATGGTTACAACA+GGG - chr1_3:74872930-74872949 Msa0140630:intron 40.0%
ATTTACTGTCTTCTAGCGAC+TGG - chr1_3:74873014-74873033 Msa0140630:intron 40.0%
AAGTAAGAGGAAACCAAGAC+AGG + chr1_3:74873054-74873073 None:intergenic 40.0%
TGTCTTGGTTTCCTCTTACT+TGG - chr1_3:74873053-74873072 Msa0140630:intron 40.0%
AAGGATCATCCTGCATAACT+TGG + chr1_3:74873145-74873164 None:intergenic 40.0%
AAGTTATGCAGGATGATCCT+TGG - chr1_3:74873144-74873163 Msa0140630:intron 40.0%
ATGATCCTTGGATGTATGGT+AGG - chr1_3:74873156-74873175 Msa0140630:intron 40.0%
TGATCCTTGGATGTATGGTA+GGG - chr1_3:74873157-74873176 Msa0140630:intron 40.0%
CCAAGTCACTACATAAGTTG+GGG + chr1_3:74873238-74873257 None:intergenic 40.0%
TACTAGGAATTAGGAGCAAG+AGG + chr1_3:74873406-74873425 None:intergenic 40.0%
TGCGAGATACAACCAATAAG+GGG + chr1_3:74873563-74873582 None:intergenic 40.0%
CAGTTTCTTTGTCAGAGGAT+TGG + chr1_3:74873605-74873624 None:intergenic 40.0%
TTGCACAGTTTCTTTGTCAG+AGG + chr1_3:74873610-74873629 None:intergenic 40.0%
! ACTCTTTGTTGACTGTAGAG+AGG + chr1_3:74874062-74874081 None:intergenic 40.0%
GTCTATGCAACTCAAACACT+TGG + chr1_3:74874094-74874113 None:intergenic 40.0%
! CATGAGAACATTCCCCATTT+TGG + chr1_3:74874167-74874186 None:intergenic 40.0%
! GTTTGAAGATGGTGCTTTTC+TGG - chr1_3:74874269-74874288 Msa0140630:CDS 40.0%
!! TTTTCTGGGAAAGTCTCTTC+CGG - chr1_3:74874284-74874303 Msa0140630:CDS 40.0%
TACTCCTAAAAAACTCGCAC+TGG - chr1_3:74874314-74874333 Msa0140630:CDS 40.0%
AAGGTGTGGAACTAGAAAAG+TGG + chr1_3:74874470-74874489 None:intergenic 40.0%
GAAATATGGCTGCCGAAAAT+GGG - chr1_3:74874511-74874530 Msa0140630:intron 40.0%
! TTATAGACTAGCCCTTCAGA+AGG + chr1_3:74874597-74874616 None:intergenic 40.0%
CTAGTCTATAAGCCATATCC+TGG - chr1_3:74874606-74874625 Msa0140630:intron 40.0%
GGAACAAATTATGGAGGATG+TGG - chr1_3:74874642-74874661 Msa0140630:intron 40.0%
ATAAATGGCATGCTGCCATA+GGG + chr1_3:74874768-74874787 None:intergenic 40.0%
!! GAAGCTGCTGCTTTCATAAA+TGG + chr1_3:74874783-74874802 None:intergenic 40.0%
TATGCATTGTCAGAGAACCA+AGG - chr1_3:74874944-74874963 Msa0140630:CDS 40.0%
AGTCCTAGTGAAATGACACA+AGG - chr1_3:74874996-74875015 Msa0140630:CDS 40.0%
GTAGCTCAGTCTATTGAAAC+AGG - chr1_3:74875095-74875114 Msa0140630:five_prime_UTR 40.0%
!! TCTAGTGCTGTTTATTCGCA+TGG - chr1_3:74875228-74875247 Msa0140630:five_prime_UTR 40.0%
CAGTGGTATGTAGATATGTC+TGG - chr1_3:74875364-74875383 Msa0140630:five_prime_UTR 40.0%
! GAGAGGGAATGATGATGAGA+AGG - chr1_3:74870873-74870892 Msa0140630:CDS 45.0%
! TTGGTGATACAGAGAAGGGA+GGG - chr1_3:74870926-74870945 Msa0140630:CDS 45.0%
!! TTATTCCTAGGAGGTGCTCT+TGG + chr1_3:74870952-74870971 None:intergenic 45.0%
! GGCAAGTTGAACCTTTGAGA+TGG + chr1_3:74871003-74871022 None:intergenic 45.0%
TTTGGCAATTAGGGTCCGTT+TGG - chr1_3:74871160-74871179 Msa0140630:CDS 45.0%
CCGTTTGGATTCACACTGTT+TGG - chr1_3:74871175-74871194 Msa0140630:CDS 45.0%
TAGAACACACACACACCCTA+AGG + chr1_3:74871380-74871399 None:intergenic 45.0%
TCCTGAAACACTTACTCGTC+AGG - chr1_3:74871509-74871528 Msa0140630:CDS 45.0%
ACAGAGAAAGAAGGTTGACG+AGG - chr1_3:74871596-74871615 Msa0140630:CDS 45.0%
AGGTTGACGAGGATGACTTT+AGG - chr1_3:74871607-74871626 Msa0140630:CDS 45.0%
GGTTGACGAGGATGACTTTA+GGG - chr1_3:74871608-74871627 Msa0140630:CDS 45.0%
!!! TCTGCAGGCTCTAGGAATTT+TGG - chr1_3:74871708-74871727 Msa0140630:intron 45.0%
CAGGGAGAATTAATCGGGAA+AGG - chr1_3:74871742-74871761 Msa0140630:intron 45.0%
AAACTTAGCAGCTCACGTCA+AGG - chr1_3:74871945-74871964 Msa0140630:intron 45.0%
GAGTCTCAATCCAATGGAAC+TGG - chr1_3:74871999-74872018 Msa0140630:intron 45.0%
ATCACGTTGTCCAGTTCCAT+TGG + chr1_3:74872012-74872031 None:intergenic 45.0%
AAACCAAACTAGTCCATCCG+AGG - chr1_3:74872082-74872101 Msa0140630:intron 45.0%
ACTGGCAGTCCTATACATAG+TGG - chr1_3:74872137-74872156 Msa0140630:intron 45.0%
CCCTTAGAGGGAAGAAATGT+AGG - chr1_3:74872666-74872685 Msa0140630:intron 45.0%
GACCAGAAAACGTGACTGTA+AGG - chr1_3:74872688-74872707 Msa0140630:intron 45.0%
TCCTGGGATCCCTTCTAATT+TGG - chr1_3:74872859-74872878 Msa0140630:intron 45.0%
ACCAAATTAGAAGGGATCCC+AGG + chr1_3:74872863-74872882 None:intergenic 45.0%
TGAGATGATCTGCTGTCACA+AGG + chr1_3:74872992-74873011 None:intergenic 45.0%
GACATGGAGAACCAAGTAAG+AGG + chr1_3:74873067-74873086 None:intergenic 45.0%
CCTTCTTAGCTCAAGTCCTT+CGG + chr1_3:74873119-74873138 None:intergenic 45.0%
CGAAGGACTTGAGCTAAGAA+GGG - chr1_3:74873117-74873136 Msa0140630:intron 45.0%
GAAGGACTTGAGCTAAGAAG+GGG - chr1_3:74873118-74873137 Msa0140630:intron 45.0%
CAGGATGATCCTTGGATGTA+TGG - chr1_3:74873152-74873171 Msa0140630:intron 45.0%
CCCCAACTTATGTAGTGACT+TGG - chr1_3:74873235-74873254 Msa0140630:intron 45.0%
TGACACACTGTAGCTAGTTG+AGG - chr1_3:74873311-74873330 Msa0140630:intron 45.0%
CTTCAATCACAGCAGGTAAC+TGG + chr1_3:74873908-74873927 None:intergenic 45.0%
GAAGGATCTTCAATCACAGC+AGG + chr1_3:74873915-74873934 None:intergenic 45.0%
! CGCTTAAGATTTTGTAGCCG+AGG + chr1_3:74874354-74874373 None:intergenic 45.0%
TGTTCTGCAGAGAATGCTGT+TGG - chr1_3:74874411-74874430 Msa0140630:CDS 45.0%
!! TCTAGTTCCACACCTTTTGC+TGG - chr1_3:74874474-74874493 Msa0140630:intron 45.0%
TGGATTTCCAGCAAAAGGTG+TGG + chr1_3:74874484-74874503 None:intergenic 45.0%
TGGTGTGGATTTCCAGCAAA+AGG + chr1_3:74874489-74874508 None:intergenic 45.0%
TTTGCTGGAAATCCACACCA+TGG - chr1_3:74874489-74874508 Msa0140630:intron 45.0%
TTTCGGCAGCCATATTTCCA+TGG + chr1_3:74874509-74874528 None:intergenic 45.0%
GGAAATATGGCTGCCGAAAA+TGG - chr1_3:74874510-74874529 Msa0140630:intron 45.0%
GGTGACTGATTGAAACACCA+GGG + chr1_3:74874543-74874562 None:intergenic 45.0%
AGGTGACTGATTGAAACACC+AGG + chr1_3:74874544-74874563 None:intergenic 45.0%
TGGTGTTTCAATCAGTCACC+TGG - chr1_3:74874543-74874562 Msa0140630:intron 45.0%
GGTGTTTCAATCAGTCACCT+GGG - chr1_3:74874544-74874563 Msa0140630:intron 45.0%
CTGTGATGTCACCTTCTGAA+GGG - chr1_3:74874583-74874602 Msa0140630:intron 45.0%
!! TTCATGAAAGTACCACCCGA+GGG + chr1_3:74874684-74874703 None:intergenic 45.0%
!! ATTCATGAAAGTACCACCCG+AGG + chr1_3:74874685-74874704 None:intergenic 45.0%
CATAAATGGCATGCTGCCAT+AGG + chr1_3:74874769-74874788 None:intergenic 45.0%
CGTCATTTATCTGAAGGGGA+AGG - chr1_3:74874852-74874871 Msa0140630:CDS 45.0%
CATCTGCAACTCAAACTCCT+TGG + chr1_3:74874964-74874983 None:intergenic 45.0%
ATGACACAAGGAATGAGCAC+AGG - chr1_3:74875008-74875027 Msa0140630:CDS 45.0%
! TGCACTTCCTCTTTTCCCTA+TGG - chr1_3:74875052-74875071 Msa0140630:five_prime_UTR 45.0%
ACTGGAACCATAGGGAAAAG+AGG + chr1_3:74875062-74875081 None:intergenic 45.0%
CTGGTTCAACTGGAACCATA+GGG + chr1_3:74875070-74875089 None:intergenic 45.0%
! TCTGGTTCAACTGGAACCAT+AGG + chr1_3:74875071-74875090 None:intergenic 45.0%
TATGGTTCCAGTTGAACCAG+AGG - chr1_3:74875070-74875089 Msa0140630:five_prime_UTR 45.0%
ATGGTTCCAGTTGAACCAGA+GGG - chr1_3:74875071-74875090 Msa0140630:five_prime_UTR 45.0%
CAGATTCAGTTGCCGATCTT+CGG + chr1_3:74875157-74875176 None:intergenic 45.0%
!! AGTGCTGTTTATTCGCATGG+AGG - chr1_3:74875231-74875250 Msa0140630:five_prime_UTR 45.0%
GGAGGATCCATTCAAGTGTA+CGG - chr1_3:74875249-74875268 Msa0140630:five_prime_UTR 45.0%
CTAGACACCGTACACTTGAA+TGG + chr1_3:74875259-74875278 None:intergenic 45.0%
CCACTGTGCTGAAAGTAACA+AGG + chr1_3:74875350-74875369 None:intergenic 45.0%
!! CCTTGTTACTTTCAGCACAG+TGG - chr1_3:74875347-74875366 Msa0140630:five_prime_UTR 45.0%
!!! GTTATTTTATAATTTTAAAT+AGG - chr1_3:74872324-74872343 Msa0140630:intron 5.0%
TGATGGGGCCATTATTCCCT+AGG - chr1_3:74870896-74870915 Msa0140630:CDS 50.0%
!! GTTGGTGATACAGAGAAGGG+AGG - chr1_3:74870925-74870944 Msa0140630:CDS 50.0%
GGAACTGTATTTGGGTGGTG+GGG + chr1_3:74871027-74871046 None:intergenic 50.0%
GGGAACTGTATTTGGGTGGT+GGG + chr1_3:74871028-74871047 None:intergenic 50.0%
ACGACGGGGGAACTGTATTT+GGG + chr1_3:74871035-74871054 None:intergenic 50.0%
GCCTGACGAGTAAGTGTTTC+AGG + chr1_3:74871513-74871532 None:intergenic 50.0%
GGGAAAAAGCTCACTTCTGC+AGG - chr1_3:74871693-74871712 Msa0140630:intron 50.0%
CACCTCAGTAAGACAAGCCA+AGG - chr1_3:74871884-74871903 Msa0140630:intron 50.0%
!! CACCTTGGCTTGTCTTACTG+AGG + chr1_3:74871889-74871908 None:intergenic 50.0%
CGAGCTGAGTCTCAATCCAA+TGG - chr1_3:74871993-74872012 Msa0140630:intron 50.0%
!! TAGCCTCGGATGGACTAGTT+TGG + chr1_3:74872088-74872107 None:intergenic 50.0%
ACTAGTCCATCCGAGGCTAT+CGG - chr1_3:74872089-74872108 Msa0140630:intron 50.0%
GGTTGACAGATCTTCTACCC+TGG + chr1_3:74872198-74872217 None:intergenic 50.0%
CACAAGGATCCACTCCAACA+TGG + chr1_3:74872976-74872995 None:intergenic 50.0%
! TTGGTTCTCCATGTCACCAC+TGG - chr1_3:74873072-74873091 Msa0140630:intron 50.0%
TGGTTCTCCATGTCACCACT+GGG - chr1_3:74873073-74873092 Msa0140630:intron 50.0%
TGAAAGGAAACATGCCCCAG+TGG + chr1_3:74873091-74873110 None:intergenic 50.0%
GTTTCCTTTCACTGCACCGA+AGG - chr1_3:74873100-74873119 Msa0140630:intron 50.0%
! AAGTCCTTCGGTGCAGTGAA+AGG + chr1_3:74873107-74873126 None:intergenic 50.0%
CCGAAGGACTTGAGCTAAGA+AGG - chr1_3:74873116-74873135 Msa0140630:intron 50.0%
AGAAGGGGACCAAGTTATGC+AGG - chr1_3:74873133-74873152 Msa0140630:intron 50.0%
GTGTCCCTACCATACATCCA+AGG + chr1_3:74873164-74873183 None:intergenic 50.0%
GGATGTATGGTAGGGACACT+TGG - chr1_3:74873165-74873184 Msa0140630:intron 50.0%
! CAGCAGGTAACTGGTTCAAC+AGG + chr1_3:74873899-74873918 None:intergenic 50.0%
CAGGTCCAACAACTGATTGC+TGG - chr1_3:74874231-74874250 Msa0140630:CDS 50.0%
GCGATCCAGCAATCAGTTGT+TGG + chr1_3:74874239-74874258 None:intergenic 50.0%
GCAGCCATATTTCCATGGTG+TGG + chr1_3:74874504-74874523 None:intergenic 50.0%
TATGGCTGCCGAAAATGGGA+TGG - chr1_3:74874515-74874534 Msa0140630:intron 50.0%
ATGGCTGCCGAAAATGGGAT+GGG - chr1_3:74874516-74874535 Msa0140630:intron 50.0%
GGAATTAACCACTGATGCCC+AGG + chr1_3:74874564-74874583 None:intergenic 50.0%
CCTTCAGAAGGTGACATCAC+AGG + chr1_3:74874585-74874604 None:intergenic 50.0%
CCTGTGATGTCACCTTCTGA+AGG - chr1_3:74874582-74874601 Msa0140630:intron 50.0%
TATAAGCCATATCCTGGGCC+TGG - chr1_3:74874612-74874631 Msa0140630:intron 50.0%
GTAAATCCAGGCCCAGGATA+TGG + chr1_3:74874621-74874640 None:intergenic 50.0%
TATCCTGGGCCTGGATTTAC+AGG - chr1_3:74874621-74874640 Msa0140630:intron 50.0%
AAGTAAGCATGGCTACCTGG+AGG + chr1_3:74874741-74874760 None:intergenic 50.0%
CATAGGGAGGGAAGTAAGCA+TGG + chr1_3:74874752-74874771 None:intergenic 50.0%
CATGCTTACTTCCCTCCCTA+TGG - chr1_3:74874750-74874769 Msa0140630:intron 50.0%
AGCACAGGACAAGTTGCTGA+AGG - chr1_3:74875023-74875042 Msa0140630:CDS 50.0%
ATAGACTGAGCTACTCCCTC+TGG + chr1_3:74875089-74875108 None:intergenic 50.0%
GGTGCCTCATAACCGAAGAT+CGG - chr1_3:74875142-74875161 Msa0140630:five_prime_UTR 50.0%
GTTGCCGATCTTCGGTTATG+AGG + chr1_3:74875149-74875168 None:intergenic 50.0%
TCCTGTACTTTCTGCACGTG+TGG - chr1_3:74875280-74875299 Msa0140630:five_prime_UTR 50.0%
!! ACTGTATTTGGGTGGTGGGG+TGG + chr1_3:74871024-74871043 None:intergenic 55.0%
GGGGAACTGTATTTGGGTGG+TGG + chr1_3:74871029-74871048 None:intergenic 55.0%
ACGGGGGAACTGTATTTGGG+TGG + chr1_3:74871032-74871051 None:intergenic 55.0%
GACGACGGGGGAACTGTATT+TGG + chr1_3:74871036-74871055 None:intergenic 55.0%
! ACTACCTGGCTCGAAGACGA+CGG + chr1_3:74871051-74871070 None:intergenic 55.0%
AGCTCACTTCTGCAGGCTCT+AGG - chr1_3:74871700-74871719 Msa0140630:intron 55.0%
AGCAGCTCACGTCAAGGTGA+TGG - chr1_3:74871951-74871970 Msa0140630:intron 55.0%
GCAGCTCACGTCAAGGTGAT+GGG - chr1_3:74871952-74871971 Msa0140630:intron 55.0%
TTCAGTGCCACCGATAGCCT+CGG + chr1_3:74872102-74872121 None:intergenic 55.0%
GGTTCTCCATGTCACCACTG+GGG - chr1_3:74873074-74873093 Msa0140630:intron 55.0%
AACATGCCCCAGTGGTGACA+TGG + chr1_3:74873083-74873102 None:intergenic 55.0%
CTGGGAAAGTCTCTTCCGGA+TGG - chr1_3:74874288-74874307 Msa0140630:CDS 55.0%
! CCAGGGACCCATCCCATTTT+CGG + chr1_3:74874526-74874545 None:intergenic 55.0%
ATCAGTCACCTGGGCATCAG+TGG - chr1_3:74874553-74874572 Msa0140630:intron 55.0%
GTTCCTGTAAATCCAGGCCC+AGG + chr1_3:74874627-74874646 None:intergenic 55.0%
TATGGAGGATGTGGGCCCTT+CGG - chr1_3:74874651-74874670 Msa0140630:intron 55.0%
!! ATGAAAGTACCACCCGAGGG+AGG + chr1_3:74874681-74874700 None:intergenic 55.0%
GGAGGTGGCATTCCATAGGA+AGG + chr1_3:74874708-74874727 None:intergenic 55.0%
CTATGGAATGCCACCTCCAC+CGG - chr1_3:74874710-74874729 Msa0140630:intron 55.0%
GGGAAGTAAGCATGGCTACC+TGG + chr1_3:74874744-74874763 None:intergenic 55.0%
ATGGCATGCTGCCATAGGGA+GGG + chr1_3:74874764-74874783 None:intergenic 55.0%
AATGGCATGCTGCCATAGGG+AGG + chr1_3:74874765-74874784 None:intergenic 55.0%
TTTGCACGCGTGCAGAGAAC+TGG + chr1_3:74874830-74874849 None:intergenic 55.0%
! GCTACTCCCTCTGGTTCAAC+TGG + chr1_3:74875080-74875099 None:intergenic 55.0%
! GCCACACGTGCAGAAAGTAC+AGG + chr1_3:74875284-74875303 None:intergenic 55.0%
GCACGTGTGGCATCGTGTAA+CGG - chr1_3:74875293-74875312 Msa0140630:five_prime_UTR 55.0%
! TACCTGGCTCGAAGACGACG+GGG + chr1_3:74871049-74871068 None:intergenic 60.0%
! CTACCTGGCTCGAAGACGAC+GGG + chr1_3:74871050-74871069 None:intergenic 60.0%
AGTCCATCCGAGGCTATCGG+TGG - chr1_3:74872092-74872111 Msa0140630:intron 60.0%
CCGAAAATGGGATGGGTCCC+TGG - chr1_3:74874523-74874542 Msa0140630:intron 60.0%
CGGTGGAGGTGGCATTCCAT+AGG + chr1_3:74874712-74874731 None:intergenic 60.0%
TGGCTACCTGGAGGAGTCTC+CGG + chr1_3:74874732-74874751 None:intergenic 60.0%
!! GAGGGCCAAGAGCACCTCCT+AGG - chr1_3:74870944-74870963 Msa0140630:CDS 65.0%
! ACCTGGCTCGAAGACGACGG+GGG + chr1_3:74871048-74871067 None:intergenic 65.0%
GTGCCACCGATAGCCTCGGA+TGG + chr1_3:74872098-74872117 None:intergenic 65.0%
CTACCTGGAGGAGTCTCCGG+TGG + chr1_3:74874729-74874748 None:intergenic 65.0%
TCCCCCGTCGTCTTCGAGCC+AGG - chr1_3:74871044-74871063 Msa0140630:CDS 70.0%
GCCCTTCGGAGCTCCTCCCT+CGG - chr1_3:74874665-74874684 Msa0140630:intron 70.0%
CCCGAGGGAGGAGCTCCGAA+GGG + chr1_3:74874669-74874688 None:intergenic 70.0%
CCCTTCGGAGCTCCTCCCTC+GGG - chr1_3:74874666-74874685 Msa0140630:intron 70.0%
ACCCGAGGGAGGAGCTCCGA+AGG + chr1_3:74874670-74874689 None:intergenic 70.0%
TTCGGAGCTCCTCCCTCGGG+TGG - chr1_3:74874669-74874688 Msa0140630:intron 70.0%
GGAGGAGTCTCCGGTGGAGG+TGG + chr1_3:74874723-74874742 None:intergenic 70.0%
CCTGGAGGAGTCTCCGGTGG+AGG + chr1_3:74874726-74874745 None:intergenic 70.0%
CCTCCACCGGAGACTCCTCC+AGG - chr1_3:74874723-74874742 Msa0140630:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 74870418 74875495 74870418 ID=Msa0140630;Name=Msa0140630
chr1_3 mRNA 74870418 74875495 74870418 ID=Msa0140630-mRNA-1;Parent=Msa0140630;Name=Msa0140630-mRNA-1;_AED=0.15;_eAED=0.15;_QI=450|1|1|1|1|1|4|263|692
chr1_3 exon 74870418 74871679 74870418 ID=Msa0140630-mRNA-1:exon:26186;Parent=Msa0140630-mRNA-1
chr1_3 exon 74871792 74871843 74871792 ID=Msa0140630-mRNA-1:exon:26185;Parent=Msa0140630-mRNA-1
chr1_3 exon 74873619 74874448 74873619 ID=Msa0140630-mRNA-1:exon:26184;Parent=Msa0140630-mRNA-1
chr1_3 exon 74874848 74875495 74874848 ID=Msa0140630-mRNA-1:exon:26183;Parent=Msa0140630-mRNA-1
chr1_3 five_prime_UTR 74875046 74875495 74875046 ID=Msa0140630-mRNA-1:five_prime_utr;Parent=Msa0140630-mRNA-1
chr1_3 CDS 74874848 74875045 74874848 ID=Msa0140630-mRNA-1:cds;Parent=Msa0140630-mRNA-1
chr1_3 CDS 74873619 74874448 74873619 ID=Msa0140630-mRNA-1:cds;Parent=Msa0140630-mRNA-1
chr1_3 CDS 74871792 74871843 74871792 ID=Msa0140630-mRNA-1:cds;Parent=Msa0140630-mRNA-1
chr1_3 CDS 74870681 74871679 74870681 ID=Msa0140630-mRNA-1:cds;Parent=Msa0140630-mRNA-1
chr1_3 three_prime_UTR 74870418 74870680 74870418 ID=Msa0140630-mRNA-1:three_prime_utr;Parent=Msa0140630-mRNA-1
Gene Sequence

>Msa0140630

ATGAAGAGAGGGAATGATGATGAGAAGGTGATGGGGCCATTATTCCCTAGGTTACATGTTGGTGATACAGAGAAGGGAGGGCCAAGAGCACCTCCTAGGAATAAAATGGCTCTCTATGAGCAATTTAGTATTCCATCTCAAAGGTTCAACTTGCCACCCCACCACCCAAATACAGTTCCCCCGTCGTCTTCGAGCCAGGGGGCTGTCCATGAGAGAAATTATGTCTTCCCTGGTCATTTAACTCCTGAAACACTTACTCGTCAGGCTGAGAAACATATTTCTCGTCAATCAGAAGGGGAAAATTTGAATGCTTCTCTGTCACAACTTGAACAGAGAAAGAAGGTTGACGAGGATGACTTTAGGGTTCCTGTATATATTCGCTCAAAGATTGGTCAATCTAATGATAAAAGTCATGAGAGTTTTGATGGGAAAAAGCTCACTTCTGCAGGCTCTAGGAATTTTGGTTTTTTCAAAGCAGGGAGAATTAATCGGGAAAGGGATCTAAACAATCTGCGGACAGACGTGAGAAATGAGATTGATGGTCCTCCGCAAGTAAGTCCAAATAAGGAGCAGCCATTTACTTCTGCCAGAGATACATCAAATGGAGAAAGTATTGACACCTCAGTAAGACAAGCCAAGGTGATTCAAAATCAACAGTTTCAAGATCGTGCTGTGTTCAAACTTAGCAGCTCACGTCAAGGTGATGGGTGCTTACGTCAAGACTGTCGAGCTGAGTCTCAATCCAATGGAACTGGACAACGTGATGCTTCCATTGAATCTACAAGGGAGACAGGCAAGAGTAATGACCCTATAGCAAACCAAACTAGTCCATCCGAGGCTATCGGTGGCACTGAATATCATGATACTGGGACTGGCAGTCCTATACATAGTGGAAATTTAAACAAAAATGACAACATTTCAAAGATCTCCAGGGTAGAAGATCTGTCAACCCTGAAAATTTCTCCTGATGATGTTGTTGCAATAATAGGTCAAAAACAATTCTGGAAAGCCAGAAAAGCAATTGCCAATCAACAAAGAGTGTTTGCAGTCCAAGTGTTTGAGTTGCATAGACTGATAAAGGTCCAACAACTGATTGCTGGATCGCCAGATCTATTGTTTGAAGATGGTGCTTTTCTGGGAAAGTCTCTTCCGGATGGATCTACTCCTAAAAAACTCGCACTGGAATATGTTGTAAAACCTCGGCTACAAAATCTTAAGCGCAAAGTTGATTCTGAAAACGTAAATCAAAACATGGAATGTTCTGCAGAGAATGCTGTTGGTAAAACATCTATTTCGTCAGTGAAAAATGGGAGCCACTTTTCTAGTTCCACACCTTTTGCTGGAAATCCACACCATGGAAATATGGCTGCCGAAAATGGGATGGGTCCCTGGTGTTTCAATCAGTCACCTGGGCATCAGTGGTTAATTCCTGTGATGTCACCTTCTGAAGGGCTAGTCTATAAGCCATATCCTGGGCCTGGATTTACAGGAACAAATTATGGAGGATGTGGGCCCTTCGGAGCTCCTCCCTCGGGTGGTACTTTCATGAATCCTTCCTATGGAATGCCACCTCCACCGGAGACTCCTCCAGGTAGCCATGCTTACTTCCCTCCCTATGGCAGCATGCCATTTATGAAAGCAGCAGCTTCAGAGTCAGCAGTCGAACATGTGAACCAGTTCTCTGCACGCGTGCAAAGTCGTCATTTATCTGAAGGGGAAGGCGATTGTAACAAACATAATCAAAGCTCATGCAATTTACCTGTTCAGAGAAATGGAGCAACAATGCATGTTATGCATTGTCAGAGAACCAAGGAGTTTGAGTTGCAGATGAGTACAGCAAGTAGTCCTAGTGAAATGACACAAGGAATGAGCACAGGACAAGTTGCTGAAGGAAGAGATGCACTTCCTCTTTTCCCTATGGTTCCAGTTGAACCAGAGGGAGTAGCTCAGTCTATTGAAACAGGACAACAAACTCGAGTTATCAAAGTGGTGCCTCATAACCGAAGATCGGCAACTGAATCTGCAGCTAGAATTTTCCAATCAATTCAAGAAGAGAGAAAACAATATGACACACTCTAG
Protein sequence

>Msa0140630

MKRGNDDEKVMGPLFPRLHVGDTEKGGPRAPPRNKMALYEQFSIPSQRFNLPPHHPNTVPPSSSSQGAVHERNYVFPGHLTPETLTRQAEKHISRQSEGENLNASLSQLEQRKKVDEDDFRVPVYIRSKIGQSNDKSHESFDGKKLTSAGSRNFGFFKAGRINRERDLNNLRTDVRNEIDGPPQVSPNKEQPFTSARDTSNGESIDTSVRQAKVIQNQQFQDRAVFKLSSSRQGDGCLRQDCRAESQSNGTGQRDASIESTRETGKSNDPIANQTSPSEAIGGTEYHDTGTGSPIHSGNLNKNDNISKISRVEDLSTLKISPDDVVAIIGQKQFWKARKAIANQQRVFAVQVFELHRLIKVQQLIAGSPDLLFEDGAFLGKSLPDGSTPKKLALEYVVKPRLQNLKRKVDSENVNQNMECSAENAVGKTSISSVKNGSHFSSSTPFAGNPHHGNMAAENGMGPWCFNQSPGHQWLIPVMSPSEGLVYKPYPGPGFTGTNYGGCGPFGAPPSGGTFMNPSYGMPPPPETPPGSHAYFPPYGSMPFMKAAASESAVEHVNQFSARVQSRHLSEGEGDCNKHNQSSCNLPVQRNGATMHVMHCQRTKEFELQMSTASSPSEMTQGMSTGQVAEGRDALPLFPMVPVEPEGVAQSIETGQQTRVIKVVPHNRRSATESAARIFQSIQEERKQYDTL*