AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0835820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0835820 MtrunA17_Chr5g0401681 95.792 499 20 1 1 498 1 499 0.0 993
Msa0835820 MtrunA17_Chr4g0053621 67.004 494 158 2 1 489 1 494 0.0 694
Msa0835820 MtrunA17_Chr4g0052861 60.976 492 185 3 2 493 10 494 0.0 655
Msa0835820 MtrunA17_Chr2g0296661 67.886 492 153 2 2 488 3 494 0.0 639
Msa0835820 MtrunA17_Chr4g0052881 62.705 488 178 2 6 489 4 491 0.0 637
Msa0835820 MtrunA17_Chr5g0401691 59.026 493 193 4 4 493 25 511 0.0 607
Msa0835820 MtrunA17_Chr4g0052851 57.261 482 192 4 14 493 17 486 0.0 583
Msa0835820 MtrunA17_Chr2g0296651 57.606 493 206 2 4 493 2 494 0.0 573
Msa0835820 MtrunA17_Chr4g0017411 57.113 478 191 4 14 489 14 479 0.0 570
Msa0835820 MtrunA17_Chr4g0039391 46.623 459 233 5 41 490 45 500 1.35e-147 432
Msa0835820 MtrunA17_Chr8g0339311 37.475 491 284 7 25 494 38 526 9.63e-109 333
Msa0835820 MtrunA17_Chr8g0344181 38.285 478 273 7 30 491 37 508 5.66e-108 330
Msa0835820 MtrunA17_Chr3g0084921 37.160 514 284 12 5 489 7 510 1.73e-104 322
Msa0835820 MtrunA17_Chr6g0451751 36.187 514 297 8 6 493 18 526 2.00e-104 322
Msa0835820 MtrunA17_Chr6g0466941 36.609 519 298 9 2 493 6 520 9.70e-104 320
Msa0835820 MtrunA17_Chr8g0344151 37.107 477 276 8 30 489 35 504 2.13e-103 319
Msa0835820 MtrunA17_Chr6g0451691 36.782 522 296 9 9 497 14 534 4.63e-103 318
Msa0835820 MtrunA17_Chr2g0310391 36.546 498 293 7 8 489 3 493 1.61e-102 316
Msa0835820 MtrunA17_Chr8g0344191 35.953 509 299 8 3 494 45 543 1.79e-102 317
Msa0835820 MtrunA17_Chr6g0451781 38.430 484 271 7 39 497 82 563 3.01e-102 317
Msa0835820 MtrunA17_Chr3g0082701 36.031 519 304 7 2 493 10 527 3.06e-102 316
Msa0835820 MtrunA17_Chr6g0466901 36.133 512 301 8 2 489 6 515 3.09e-102 316
Msa0835820 MtrunA17_Chr1g0174481 36.706 504 283 11 6 486 4 494 4.22e-102 315
Msa0835820 MtrunA17_Chr2g0310381 36.032 494 295 6 6 485 3 489 8.72e-102 314
Msa0835820 MtrunA17_Chr8g0339331 38.105 475 277 8 32 489 39 513 2.89e-101 313
Msa0835820 MtrunA17_Chr4g0061381 36.093 471 273 8 40 489 40 503 2.00e-99 308
Msa0835820 MtrunA17_Chr3g0086691 36.966 468 275 5 40 489 41 506 2.27e-99 308
Msa0835820 MtrunA17_Chr3g0116681 35.471 499 290 11 8 487 16 501 2.92e-99 308
Msa0835820 MtrunA17_Chr6g0458561 36.779 503 295 11 14 494 30 531 5.38e-99 308
Msa0835820 MtrunA17_Chr3g0116741 37.782 487 278 10 12 482 32 509 3.94e-98 305
Msa0835820 MtrunA17_Chr4g0057001 35.041 488 298 5 14 489 33 513 1.11e-97 304
Msa0835820 MtrunA17_Chr6g0451741 35.547 512 298 8 9 489 34 544 2.17e-97 305
Msa0835820 MtrunA17_Chr8g0382901 36.327 490 290 8 13 489 474 954 1.50e-96 312
Msa0835820 MtrunA17_Chr8g0382901 36.364 495 276 10 6 485 1 471 4.57e-91 298
Msa0835820 MtrunA17_Chr4g0058191 35.628 494 294 7 6 486 3 485 1.93e-96 300
Msa0835820 MtrunA17_Chr2g0304871 35.388 503 300 8 14 494 19 518 1.03e-95 299
Msa0835820 MtrunA17_Chr1g0174461 35.913 504 292 11 4 486 6 499 1.82e-95 298
Msa0835820 MtrunA17_Chr3g0101601 34.638 511 293 11 4 491 7 499 2.27e-95 298
Msa0835820 MtrunA17_Chr4g0047691 35.882 510 295 8 2 493 23 518 2.46e-95 298
Msa0835820 MtrunA17_Chr7g0258221 35.743 498 288 9 5 478 4 493 6.19e-95 297
Msa0835820 MtrunA17_Chr3g0101721 35.583 489 277 12 30 495 36 509 1.09e-94 296
Msa0835820 MtrunA17_Chr4g0008101 34.816 517 305 8 10 496 15 529 2.19e-94 296
Msa0835820 MtrunA17_Chr3g0101631 34.861 502 288 10 11 491 15 498 2.29e-94 295
Msa0835820 MtrunA17_Chr1g0174451 34.677 496 294 8 5 478 7 494 3.75e-94 295
Msa0835820 MtrunA17_Chr4g0011961 36.327 490 290 9 14 488 12 494 3.77e-94 294
Msa0835820 MtrunA17_Chr4g0047631 34.861 502 293 8 3 486 24 509 7.91e-94 294
Msa0835820 MtrunA17_Chr1g0174471 34.990 503 297 10 5 486 22 515 1.35e-93 294
Msa0835820 MtrunA17_Chr4g0047661 34.600 500 293 9 8 486 28 514 1.76e-93 293
Msa0835820 MtrunA17_Chr6g0472311 35.673 513 290 11 5 486 11 514 5.55e-93 292
Msa0835820 MtrunA17_Chr4g0058231 34.843 508 298 9 6 490 2 499 5.94e-93 291
Msa0835820 MtrunA17_Chr4g0058281 36.382 503 288 9 2 483 17 508 6.37e-93 292
Msa0835820 MtrunA17_Chr3g0101621 33.988 509 300 10 1 491 3 493 8.35e-93 291
Msa0835820 MtrunA17_Chr7g0255531 32.803 503 314 9 3 491 6 498 1.11e-92 291
Msa0835820 MtrunA17_Chr4g0046631 35.833 480 283 5 29 489 44 517 1.75e-92 291
Msa0835820 MtrunA17_Chr5g0403331 35.586 503 284 12 3 479 6 494 2.28e-92 290
Msa0835820 MtrunA17_Chr3g0086651 34.774 509 309 7 1 489 1 506 3.03e-92 290
Msa0835820 MtrunA17_Chr4g0011901 36.495 485 285 9 20 488 18 495 3.20e-92 289
Msa0835820 MtrunA17_Chr3g0086661 34.971 509 308 7 1 489 1 506 6.84e-92 289
Msa0835820 MtrunA17_Chr3g0094231 34.029 479 294 7 23 489 31 499 8.96e-92 288
Msa0835820 MtrunA17_Chr4g0030701 35.908 479 267 9 32 478 36 506 8.98e-92 289
Msa0835820 MtrunA17_Chr5g0445451 37.298 496 274 13 4 479 12 490 1.00e-91 288
Msa0835820 MtrunA17_Chr1g0200961 36.978 503 289 9 1 485 1 493 1.01e-91 288
Msa0835820 MtrunA17_Chr3g0101731 34.100 522 302 12 1 495 1 507 1.61e-91 288
Msa0835820 MtrunA17_Chr5g0403351 33.730 504 297 10 3 482 6 496 1.99e-91 288
Msa0835820 MtrunA17_Chr5g0445441 37.275 499 276 12 4 482 53 534 4.94e-91 288
Msa0835820 MtrunA17_Chr3g0101651 35.010 477 275 8 28 482 35 498 5.16e-91 286
Msa0835820 MtrunA17_Chr4g0047641 34.325 504 301 8 2 486 21 513 6.13e-91 287
Msa0835820 MtrunA17_Chr6g0451641 33.988 509 300 11 5 487 15 513 1.69e-90 286
Msa0835820 MtrunA17_Chr6g0484811 34.585 506 295 12 8 489 12 505 4.08e-90 284
Msa0835820 MtrunA17_Chr5g0430031 33.721 516 303 11 1 489 1 504 9.11e-90 283
Msa0835820 MtrunA17_Chr4g0058201 34.855 482 289 8 21 486 18 490 9.97e-90 283
Msa0835820 MtrunA17_Chr3g0094171 34.669 499 301 9 9 489 16 507 1.11e-89 283
Msa0835820 MtrunA17_Chr8g0362701 33.700 454 278 6 42 478 46 493 1.66e-89 283
Msa0835820 MtrunA17_Chr7g0235551 33.602 497 296 9 5 476 7 494 2.10e-89 283
Msa0835820 MtrunA17_Chr5g0430131 34.118 510 304 9 1 489 5 503 5.36e-89 281
Msa0835820 MtrunA17_Chr7g0254641 34.021 485 295 8 27 489 33 514 7.29e-89 281
Msa0835820 MtrunA17_Chr3g0101701 33.531 507 298 11 2 482 5 498 2.07e-88 280
Msa0835820 MtrunA17_Chr1g0174441 33.400 497 296 10 9 478 27 515 2.66e-88 280
Msa0835820 MtrunA17_Chr5g0419691 35.518 473 282 8 32 488 30 495 3.43e-88 279
Msa0835820 MtrunA17_Chr3g0101691 34.122 507 295 11 2 482 5 498 1.01e-87 278
Msa0835820 MtrunA17_Chr4g0011881 37.423 489 280 11 18 488 15 495 1.56e-87 277
Msa0835820 MtrunA17_Chr5g0445381 36.600 500 276 13 4 479 39 521 2.05e-87 278
Msa0835820 MtrunA17_Chr5g0430101 33.268 511 304 10 2 489 5 501 2.15e-87 277
Msa0835820 MtrunA17_Chr5g0445421 35.542 498 265 12 4 482 86 546 2.78e-87 278
Msa0835820 MtrunA17_Chr5g0445461 34.843 508 294 11 4 491 12 502 5.55e-87 276
Msa0835820 MtrunA17_Chr4g0011921 36.056 502 294 12 6 488 2 495 5.63e-87 276
Msa0835820 MtrunA17_Chr1g0156101 34.350 492 297 9 24 491 25 514 8.17e-87 276
Msa0835820 MtrunA17_Chr3g0101661 33.663 505 293 11 2 479 5 494 8.71e-87 276
Msa0835820 MtrunA17_Chr6g0484841 33.469 493 293 10 20 489 24 504 8.99e-87 276
Msa0835820 MtrunA17_Chr3g0101811 33.647 532 298 13 3 494 5 521 1.15e-86 276
Msa0835820 MtrunA17_Chr5g0431641 34.911 507 299 11 2 491 10 502 1.21e-86 275
Msa0835820 MtrunA17_Chr8g0361471 34.310 478 275 12 6 459 6 468 2.83e-86 274
Msa0835820 MtrunA17_Chr1g0164211 37.020 443 259 7 31 462 31 464 3.36e-86 274
Msa0835820 MtrunA17_Chr3g0101671 32.567 522 308 12 1 492 1 508 3.39e-86 274
Msa0835820 MtrunA17_Chr5g0406651 36.585 492 287 9 15 488 12 496 3.44e-86 274
Msa0835820 MtrunA17_Chr4g0024771 33.135 504 303 11 8 491 13 502 6.67e-86 273
Msa0835820 MtrunA17_Chr3g0101711 32.233 515 310 11 1 492 9 507 7.19e-86 273
Msa0835820 MtrunA17_Chr1g0160851 34.476 496 299 11 3 483 7 491 8.11e-86 273
Msa0835820 MtrunA17_Chr6g0465511 33.962 477 278 11 6 459 6 468 1.22e-85 273
Msa0835820 MtrunA17_Chr3g0101751 33.527 516 305 11 3 494 12 513 1.55e-85 273
Msa0835820 MtrunA17_Chr4g0030711 32.553 470 276 6 42 478 48 509 3.72e-85 272
Msa0835820 MtrunA17_Chr6g0466331 34.172 477 277 12 6 459 6 468 4.19e-85 271
Msa0835820 MtrunA17_Chr5g0430081 32.353 510 312 9 2 489 4 502 4.84e-85 271
Msa0835820 MtrunA17_Chr8g0357421 35.156 512 291 15 9 493 8 505 4.87e-85 271
Msa0835820 MtrunA17_Chr4g0056951 35.438 491 292 8 15 489 27 508 5.50e-85 271
Msa0835820 MtrunA17_Chr5g0431671 34.440 482 281 10 30 491 37 503 1.26e-84 270
Msa0835820 MtrunA17_Chr1g0213671 35.135 481 277 11 30 485 33 503 5.64e-84 269
Msa0835820 MtrunA17_Chr3g0101581 31.703 511 314 10 2 490 6 503 5.98e-84 268
Msa0835820 MtrunA17_Chr4g0011981 35.052 485 290 10 21 488 19 495 1.15e-83 267
Msa0835820 MtrunA17_Chr8g0357431 35.478 513 289 15 9 493 8 506 1.70e-83 267
Msa0835820 MtrunA17_Chr5g0403321 33.891 478 278 9 31 482 34 499 1.86e-83 267
Msa0835820 MtrunA17_Chr4g0011871 34.672 473 287 8 32 488 30 496 2.22e-83 266
Msa0835820 MtrunA17_Chr3g0101821 34.104 519 300 12 1 492 1 504 2.40e-83 266
Msa0835820 MtrunA17_Chr5g0431511 33.473 478 291 9 31 489 33 502 2.86e-83 266
Msa0835820 MtrunA17_Chr8g0362481 33.411 428 262 6 68 478 3 424 2.99e-83 265
Msa0835820 MtrunA17_Chr8g0390881 32.816 515 307 13 1 489 3 504 3.61e-83 266
Msa0835820 MtrunA17_Chr3g0101801 33.398 515 305 12 4 494 13 513 3.84e-83 266
Msa0835820 MtrunA17_Chr5g0446151 34.681 470 275 13 30 482 40 494 5.57e-83 265
Msa0835820 MtrunA17_Chr5g0446161 33.071 508 299 14 1 482 1 493 2.79e-82 264
Msa0835820 MtrunA17_Chr5g0431501 33.264 478 292 9 31 489 33 502 2.94e-82 264
Msa0835820 MtrunA17_Chr5g0431461 33.264 478 292 9 31 489 33 502 2.94e-82 264
Msa0835820 MtrunA17_Chr3g0101611 33.263 475 278 9 31 482 38 496 3.43e-82 264
Msa0835820 MtrunA17_Chr3g0101761 33.852 514 300 13 4 492 6 504 6.27e-82 263
Msa0835820 MtrunA17_Chr4g0076161 33.728 507 290 14 5 482 7 496 7.55e-82 263
Msa0835820 MtrunA17_Chr6g0463791 35.248 505 286 15 2 482 5 492 8.10e-82 262
Msa0835820 MtrunA17_Chr8g0356001 32.797 497 309 8 5 483 11 500 1.43e-81 262
Msa0835820 MtrunA17_Chr1g0207841 33.051 472 277 8 38 478 45 508 1.49e-81 263
Msa0835820 MtrunA17_Chr1g0205371 34.269 499 304 10 2 485 5 494 3.30e-81 261
Msa0835820 MtrunA17_Chr1g0205361 34.043 470 285 10 31 485 34 493 5.77e-81 260
Msa0835820 MtrunA17_Chr5g0445531 32.383 491 293 9 22 491 29 501 6.61e-81 260
Msa0835820 MtrunA17_Chr6g0463801 32.500 480 296 8 18 482 24 490 9.48e-81 259
Msa0835820 MtrunA17_Chr5g0430091 31.507 511 317 8 1 489 5 504 9.64e-81 260
Msa0835820 MtrunA17_Chr5g0395331 33.737 495 295 13 11 485 20 501 2.71e-80 259
Msa0835820 MtrunA17_Chr7g0258211 34.423 459 275 7 38 477 46 497 2.93e-80 259
Msa0835820 MtrunA17_Chr4g0035921 31.801 522 304 11 5 489 7 513 4.21e-80 258
Msa0835820 MtrunA17_Chr7g0224551 32.812 512 287 12 3 478 7 497 4.82e-80 258
Msa0835820 MtrunA17_Chr3g0101571 31.610 503 305 10 11 491 16 501 1.00e-79 257
Msa0835820 MtrunA17_Chr4g0058261 33.610 482 287 9 25 483 56 527 1.09e-79 258
Msa0835820 MtrunA17_Chr1g0156081 34.756 492 295 9 24 491 49 538 1.34e-79 258
Msa0835820 MtrunA17_Chr7g0224561 32.617 512 288 12 3 478 7 497 6.22e-79 255
Msa0835820 MtrunA17_Chr4g0020041 31.548 504 306 11 4 482 6 495 1.08e-78 254
Msa0835820 MtrunA17_Chr5g0395321 33.006 509 299 13 5 489 9 499 3.41e-78 254
Msa0835820 MtrunA17_Chr3g0101831 34.100 522 299 13 1 494 3 507 5.79e-78 253
Msa0835820 MtrunA17_Chr7g0246221 31.643 493 306 10 11 484 18 498 9.07e-78 252
Msa0835820 MtrunA17_Chr5g0430111 34.186 430 258 6 1 416 5 423 1.89e-77 249
Msa0835820 MtrunA17_Chr5g0405001 31.631 509 307 10 8 489 19 513 5.36e-77 250
Msa0835820 MtrunA17_Chr7g0218611 33.747 483 293 11 23 487 25 498 1.55e-76 249
Msa0835820 MtrunA17_Chr6g0451681 32.329 498 257 9 6 487 40 473 1.57e-76 248
Msa0835820 MtrunA17_Chr8g0372251 32.245 490 292 10 26 489 30 505 4.94e-76 248
Msa0835820 MtrunA17_Chr3g0101741 31.663 439 275 7 68 494 3 428 1.06e-75 244
Msa0835820 MtrunA17_Chr1g0162811 31.456 515 314 10 4 494 6 505 1.90e-75 246
Msa0835820 MtrunA17_Chr8g0355961 32.979 470 293 7 5 459 11 473 1.87e-74 243
Msa0835820 MtrunA17_Chr4g0039901 32.712 483 300 7 19 487 26 497 3.70e-74 243
Msa0835820 MtrunA17_Chr2g0280261 34.177 474 283 10 25 482 27 487 5.74e-74 242
Msa0835820 MtrunA17_Chr7g0265611 32.600 500 306 10 9 488 28 516 5.76e-74 243
Msa0835820 MtrunA17_Chr8g0351801 31.568 472 279 10 41 477 44 506 6.78e-74 242
Msa0835820 MtrunA17_Chr7g0246151 31.897 464 284 10 42 484 45 497 6.87e-74 242
Msa0835820 MtrunA17_Chr1g0167321 33.531 507 298 13 1 482 1 493 7.67e-74 242
Msa0835820 MtrunA17_Chr5g0395381 31.809 503 277 11 6 485 10 469 1.27e-73 240
Msa0835820 MtrunA17_Chr1g0162801 32.742 507 297 10 4 482 6 496 1.82e-73 241
Msa0835820 MtrunA17_Chr7g0218601 32.591 494 305 13 11 487 15 497 1.92e-73 241
Msa0835820 MtrunA17_Chr7g0246121 32.272 471 284 11 42 490 45 502 6.06e-72 237
Msa0835820 MtrunA17_Chr2g0314731 31.976 491 310 10 5 478 2 485 1.20e-71 235
Msa0835820 MtrunA17_Chr1g0176831 31.646 474 294 9 4 459 33 494 1.87e-71 236
Msa0835820 MtrunA17_Chr7g0246131 32.874 508 308 12 3 487 5 502 3.08e-70 232
Msa0835820 MtrunA17_Chr2g0314721 32.906 468 286 9 8 459 20 475 8.71e-70 231
Msa0835820 MtrunA17_Chr4g0046351 30.478 502 289 16 25 486 26 507 1.09e-69 231
Msa0835820 MtrunA17_Chr4g0046321 30.677 502 288 16 25 486 26 507 5.34e-69 229
Msa0835820 MtrunA17_Chr4g0046331 29.735 528 302 17 8 486 2 509 1.89e-68 228
Msa0835820 MtrunA17_Chr1g0197881 30.638 470 300 8 5 459 3 461 9.03e-66 220
Msa0835820 MtrunA17_Chr1g0197891 30.998 471 298 8 5 459 3 462 1.98e-65 219
Msa0835820 MtrunA17_Chr1g0200951 31.884 483 284 17 34 494 64 523 2.92e-65 220
Msa0835820 MtrunA17_Chr1g0197851 30.573 471 300 8 5 459 3 462 4.05e-65 218
Msa0835820 MtrunA17_Chr1g0198191 30.174 517 316 13 3 489 14 515 8.75e-65 218
Msa0835820 MtrunA17_Chr5g0432751 30.490 469 286 12 31 473 33 487 1.90e-63 214
Msa0835820 MtrunA17_Chr1g0197871 29.892 465 299 9 11 459 9 462 1.73e-62 211
Msa0835820 MtrunA17_Chr5g0419451 28.631 482 315 11 20 488 49 514 2.96e-60 206
Msa0835820 MtrunA17_Chr8g0346261 28.452 478 305 14 33 495 86 541 1.28e-59 205
Msa0835820 MtrunA17_Chr1g0210091 29.451 455 291 10 40 473 74 519 6.94e-58 200
Msa0835820 MtrunA17_Chr3g0107611 26.639 488 319 13 3 458 19 499 7.53e-57 197
Msa0835820 MtrunA17_Chr7g0246181 31.004 458 284 13 42 478 45 491 9.57e-57 196
Msa0835820 MtrunA17_Chr8g0370641 28.373 504 332 14 1 479 10 509 7.94e-56 194
Msa0835820 MtrunA17_Chr1g0160861 36.897 290 167 5 208 483 45 332 2.46e-55 188
Msa0835820 MtrunA17_Chr8g0377341 28.992 476 308 13 34 494 70 530 3.18e-55 193
Msa0835820 MtrunA17_Chr5g0430071 34.437 302 178 6 208 489 56 357 5.76e-55 188
Msa0835820 MtrunA17_Chr8g0370651 27.626 514 337 14 7 489 13 522 4.66e-54 190
Msa0835820 MtrunA17_Chr4g0074581 29.412 510 311 14 8 485 46 538 6.72e-53 187
Msa0835820 MtrunA17_Chr1g0174431 44.724 199 95 3 298 482 1 198 2.58e-51 173
Msa0835820 MtrunA17_Chr4g0046681 42.723 213 115 1 284 489 17 229 7.87e-51 173
Msa0835820 MtrunA17_Chr8g0364651 27.767 515 317 15 8 489 6 498 8.89e-51 180
Msa0835820 MtrunA17_Chr3g0107541 27.218 496 333 10 4 476 23 513 3.27e-50 179
Msa0835820 MtrunA17_Chr5g0409051 26.012 519 336 12 5 489 4 508 7.24e-50 178
Msa0835820 MtrunA17_Chr6g0451811 45.755 212 107 2 295 498 1 212 1.33e-49 169
Msa0835820 MtrunA17_Chr2g0310351 42.289 201 108 2 298 490 1 201 3.51e-49 167
Msa0835820 MtrunA17_Chr2g0280071 29.580 524 313 17 1 489 34 536 4.44e-49 179
Msa0835820 MtrunA17_Chr5g0431591 34.130 293 177 6 206 482 19 311 4.65e-48 168
Msa0835820 MtrunA17_Chr2g0280121 29.399 466 290 12 49 489 58 509 5.74e-48 173
Msa0835820 MtrunA17_Chr2g0280081 30.192 520 319 14 1 489 498 1004 1.78e-47 176
Msa0835820 MtrunA17_Chr2g0280081 28.743 501 321 11 1 476 1 490 3.19e-43 164
Msa0835820 MtrunA17_Chr5g0413911 29.209 493 301 11 30 484 41 523 6.21e-47 171
Msa0835820 MtrunA17_Chr8g0387101 30.022 453 284 13 55 484 59 501 8.79e-46 167
Msa0835820 MtrunA17_Chr4g0058211 43.077 195 105 2 298 486 19 213 1.44e-45 159
Msa0835820 MtrunA17_Chr4g0011941 44.503 191 96 3 298 479 1 190 1.49e-45 158
Msa0835820 MtrunA17_Chr5g0402971 34.155 284 167 6 29 297 38 316 2.13e-44 159
Msa0835820 MtrunA17_Chr5g0402981 44.211 190 98 3 308 489 2 191 2.18e-44 155
Msa0835820 MtrunA17_Chr4g0011851 37.441 211 124 2 286 488 4 214 2.20e-44 155
Msa0835820 MtrunA17_Chr2g0334021 26.160 474 314 13 25 478 30 487 4.07e-44 162
Msa0835820 MtrunA17_Chr6g0451771 41.624 197 108 1 298 487 22 218 9.64e-44 154
Msa0835820 MtrunA17_Chr2g0280041 27.961 515 333 12 1 489 33 535 1.62e-43 161
Msa0835820 MtrunA17_Chr4g0046691 36.475 244 138 5 25 262 31 263 1.68e-43 156
Msa0835820 MtrunA17_Chr1g0174421 32.028 281 175 5 30 301 46 319 3.10e-42 153
Msa0835820 MtrunA17_Chr4g0046671 32.946 258 148 6 32 275 45 291 1.47e-41 151
Msa0835820 MtrunA17_Chr1g0156061 30.658 486 238 15 24 482 48 461 2.19e-41 154
Msa0835820 MtrunA17_Chr6g0477081 36.318 201 121 1 208 408 48 241 5.36e-41 147
Msa0835820 MtrunA17_Chr4g0046661 41.429 210 116 1 287 489 14 223 7.11e-41 146
Msa0835820 MtrunA17_Chr8g0390871 37.981 208 119 4 291 489 20 226 5.67e-40 144
Msa0835820 MtrunA17_Chr8g0364631 28.337 487 313 9 30 490 31 507 1.16e-39 150
Msa0835820 MtrunA17_Chr5g0446101 31.861 317 193 9 178 482 1 306 1.33e-39 145
Msa0835820 MtrunA17_Chr2g0314781 44.375 160 83 2 314 467 1 160 1.72e-39 140
Msa0835820 MtrunA17_Chr6g0451801 29.032 310 199 5 9 297 14 323 3.46e-39 145
Msa0835820 MtrunA17_Chr4g0011931 33.113 302 185 8 6 297 2 296 4.62e-38 141
Msa0835820 MtrunA17_Chr4g0011861 31.769 277 175 6 32 300 30 300 5.59e-36 135
Msa0835820 MtrunA17_Chr3g0101591 37.500 192 112 2 299 482 40 231 1.51e-35 132
Msa0835820 MtrunA17_Chr6g0463611 32.753 287 173 8 2 281 19 292 1.51e-35 135
Msa0835820 MtrunA17_Chr6g0463621 38.071 197 109 4 298 482 1 196 1.52e-35 131
Msa0835820 MtrunA17_Chr5g0445371 32.700 263 127 8 243 486 1 232 1.36e-33 127
Msa0835820 MtrunA17_Chr5g0430151 40.000 175 96 4 324 489 1 175 5.89e-33 123
Msa0835820 MtrunA17_Chr3g0105761 36.000 200 110 3 299 482 1 198 9.99e-33 124
Msa0835820 MtrunA17_Chr5g0423621 37.158 183 99 5 314 485 1 178 4.39e-32 121
Msa0835820 MtrunA17_Chr5g0430041 37.356 174 94 3 324 482 1 174 1.87e-31 119
Msa0835820 MtrunA17_Chr5g0445751 30.739 257 162 7 24 277 36 279 2.51e-31 123
Msa0835820 MtrunA17_Chr5g0445351 40.244 164 90 2 327 482 53 216 5.50e-31 119
Msa0835820 MtrunA17_Chr0c19g0493771 24.893 466 305 13 50 492 210 653 1.09e-30 126
Msa0835820 MtrunA17_Chr3g0086681 38.854 157 84 2 345 489 12 168 2.94e-30 116
Msa0835820 MtrunA17_Chr4g0046701 38.854 157 89 1 340 489 1 157 2.47e-29 113
Msa0835820 MtrunA17_Chr3g0116731 41.353 133 69 2 351 482 3 127 1.11e-28 110
Msa0835820 MtrunA17_Chr3g0107551 35.294 170 100 2 298 458 5 173 1.12e-28 112
Msa0835820 MtrunA17_Chr5g0445761 39.521 167 96 1 298 459 1 167 1.46e-28 112
Msa0835820 MtrunA17_Chr2g0280011 33.005 203 124 2 299 489 9 211 2.41e-28 112
Msa0835820 MtrunA17_Chr4g0030741 28.328 293 183 7 40 321 73 349 2.96e-28 115
Msa0835820 MtrunA17_Chr1g0207851 31.839 223 144 4 38 260 45 259 1.12e-27 114
Msa0835820 MtrunA17_Chr3g0117301 41.379 116 63 1 349 459 1 116 2.57e-27 106
Msa0835820 MtrunA17_Chr2g0280061 33.684 190 114 2 299 476 9 198 5.13e-27 108
Msa0835820 MtrunA17_Chr5g0445411 40.123 162 92 3 3 161 18 177 5.22e-27 107
Msa0835820 MtrunA17_Chr3g0135841 22.555 501 324 13 33 483 44 530 9.37e-27 113
Msa0835820 MtrunA17_Chr5g0444981 43.871 155 81 2 310 459 23 176 3.83e-26 105
Msa0835820 MtrunA17_Chr2g0293411 25.055 451 291 16 30 461 40 462 4.15e-26 111
Msa0835820 MtrunA17_Chr6g0451761 31.159 276 159 7 3 274 12 260 2.28e-25 105
Msa0835820 MtrunA17_Chr5g0400421 24.784 464 287 20 27 464 41 468 3.16e-25 108
Msa0835820 MtrunA17_Chr3g0101541 40.000 125 70 1 346 465 1 125 3.32e-24 98.2
Msa0835820 MtrunA17_Chr2g0310371 37.143 140 88 0 9 148 6 145 4.45e-24 98.2
Msa0835820 MtrunA17_Chr2g0293421 24.283 453 281 17 30 457 44 459 1.13e-23 103
Msa0835820 MtrunA17_Chr4g0028321 36.090 133 76 2 366 489 25 157 3.22e-23 96.3
Msa0835820 MtrunA17_Chr5g0430171 27.119 236 159 3 1 234 5 229 3.29e-23 98.2
Msa0835820 MtrunA17_Chr3g0141801 23.810 462 299 13 23 464 33 461 4.72e-23 102
Msa0835820 MtrunA17_Chr8g0381541 23.632 457 294 16 31 464 43 467 1.00e-22 101
Msa0835820 MtrunA17_Chr5g0431631 41.593 113 64 2 30 140 49 161 3.07e-22 93.2
Msa0835820 MtrunA17_Chr8g0339861 24.033 491 302 19 7 464 12 464 3.40e-22 99.4
Msa0835820 MtrunA17_Chr5g0445361 37.879 132 74 2 368 491 8 139 4.36e-22 92.0
Msa0835820 MtrunA17_Chr8g0381571 23.982 442 281 16 31 449 43 452 5.68e-22 98.6
Msa0835820 MtrunA17_Chr5g0396521 24.112 535 318 20 20 489 57 568 1.23e-21 98.2
Msa0835820 MtrunA17_Chr8g0372591 33.898 118 78 0 298 415 3 120 2.78e-21 90.1
Msa0835820 MtrunA17_Chr2g0280051 28.736 261 169 8 1 254 44 294 8.39e-21 93.2
Msa0835820 MtrunA17_Chr3g0107561 25.362 276 189 6 4 267 18 288 8.92e-21 93.6
Msa0835820 MtrunA17_Chr7g0248991 25.402 311 212 7 120 420 55 355 1.11e-20 93.6
Msa0835820 MtrunA17_Chr8g0369791 23.299 485 307 16 1 464 3 443 1.43e-20 94.4
Msa0835820 MtrunA17_Chr8g0354531 25.231 432 273 15 50 459 214 617 2.69e-20 94.4
Msa0835820 MtrunA17_Chr4g0063221 23.474 426 274 12 55 454 87 486 3.47e-20 93.6
Msa0835820 MtrunA17_Chr4g0030761 37.241 145 56 4 349 475 1 128 3.70e-20 87.0
Msa0835820 MtrunA17_Chr8g0387001 24.053 449 282 15 34 441 29 459 3.75e-20 93.6
Msa0835820 MtrunA17_Chr1g0176851 27.917 240 161 6 118 352 2 234 8.21e-20 88.6
Msa0835820 MtrunA17_Chr3g0117321 41.026 117 69 0 33 149 9 125 1.83e-19 84.3
Msa0835820 MtrunA17_Chr3g0105751 25.483 259 177 6 12 260 27 279 2.33e-19 90.1
Msa0835820 MtrunA17_Chr8g0351311 23.433 367 253 10 120 465 130 489 3.63e-19 90.5
Msa0835820 MtrunA17_Chr8g0351401 24.116 481 305 20 15 459 25 481 4.50e-19 90.1
Msa0835820 MtrunA17_Chr3g0078411 22.453 481 319 15 3 466 2 445 5.46e-19 89.7
Msa0835820 MtrunA17_Chr4g0044851 21.798 445 300 12 31 462 37 446 7.35e-19 89.4
Msa0835820 MtrunA17_Chr7g0262111 23.060 451 305 12 34 459 44 477 9.37e-19 89.0
Msa0835820 MtrunA17_Chr6g0455461 22.292 480 321 15 3 466 2 445 1.11e-18 88.6
Msa0835820 MtrunA17_Chr8g0380471 25.356 351 237 12 120 465 125 455 1.25e-18 88.6
Msa0835820 MtrunA17_Chr5g0408181 23.319 476 309 15 1 462 6 439 1.34e-18 88.2
Msa0835820 MtrunA17_Chr1g0151221 25.822 213 150 4 244 449 277 488 1.70e-18 88.6
Msa0835820 MtrunA17_Chr1g0204271 24.528 371 246 14 120 466 124 484 5.36e-18 86.7
Msa0835820 MtrunA17_Chr2g0313771 23.820 445 293 16 39 459 73 495 6.21e-18 86.7
Msa0835820 MtrunA17_Chr7g0215181 21.002 419 293 11 55 458 85 480 9.34e-18 85.9
Msa0835820 MtrunA17_Chr2g0313821 22.430 428 286 14 55 459 84 488 9.99e-18 85.9
Msa0835820 MtrunA17_Chr1g0193811 23.641 423 284 14 55 458 85 487 1.04e-17 85.9
Msa0835820 MtrunA17_Chr8g0354511 23.690 439 294 15 41 459 79 496 1.10e-17 85.9
Msa0835820 MtrunA17_Chr5g0400411 22.637 455 307 14 27 464 41 467 1.43e-17 85.5
Msa0835820 MtrunA17_Chr5g0443731 24.891 458 294 19 25 463 23 449 1.73e-17 85.1
Msa0835820 MtrunA17_Chr1g0179811 23.297 455 291 14 61 483 107 535 1.76e-17 85.1
Msa0835820 MtrunA17_Chr4g0056981 47.222 72 38 0 324 395 1 72 2.63e-17 76.3
Msa0835820 MtrunA17_Chr6g0478161 21.722 511 328 18 3 482 18 487 5.77e-17 83.6
Msa0835820 MtrunA17_Chr2g0280001 31.868 182 114 5 1 175 34 212 5.84e-17 79.7
Msa0835820 MtrunA17_Chr8g0372711 24.416 471 309 17 5 458 16 456 6.10e-17 83.6
Msa0835820 MtrunA17_Chr6g0449361 25.595 336 220 11 140 448 132 464 6.31e-17 83.6
Msa0835820 MtrunA17_Chr2g0313791 23.059 425 270 16 61 459 90 483 7.60e-17 83.2
Msa0835820 MtrunA17_Chr2g0313831 24.648 426 271 15 56 456 85 485 7.92e-17 83.2
Msa0835820 MtrunA17_Chr6g0449351 26.384 307 186 10 169 448 131 424 8.29e-17 82.8
Msa0835820 MtrunA17_Chr3g0128461 22.535 426 281 16 55 456 93 493 2.00e-16 82.0
Msa0835820 MtrunA17_Chr4g0076171 29.508 183 94 4 314 482 1 162 3.34e-16 76.3
Msa0835820 MtrunA17_Chr4g0004481 26.298 289 192 10 168 441 164 446 3.41e-16 81.3
Msa0835820 MtrunA17_Chr6g0449381 27.551 294 187 9 169 441 171 459 3.69e-16 80.9
Msa0835820 MtrunA17_Chr3g0104351 22.741 343 239 6 120 441 133 470 3.75e-16 81.3
Msa0835820 MtrunA17_Chr2g0313781 22.989 435 275 16 61 459 90 500 4.09e-16 80.9
Msa0835820 MtrunA17_Chr2g0286091 26.667 195 132 5 283 469 290 481 7.13e-16 80.1
Msa0835820 MtrunA17_Chr8g0348751 24.688 320 197 10 153 441 158 464 9.15e-16 80.1
Msa0835820 MtrunA17_Chr5g0397971 22.395 451 295 15 31 461 31 446 9.92e-16 79.7
Msa0835820 MtrunA17_Chr7g0219961 25.229 218 156 4 254 466 229 444 1.96e-15 78.6
Msa0835820 MtrunA17_Chr8g0334941 25.000 232 155 5 241 457 71 298 2.40e-15 77.4
Msa0835820 MtrunA17_Chr4g0038271 23.316 386 247 13 97 441 137 514 2.94e-15 78.6
Msa0835820 MtrunA17_Chr1g0164371 22.574 474 307 15 8 462 20 452 3.14e-15 78.2
Msa0835820 MtrunA17_Chr8g0334891 24.569 232 156 5 241 457 226 453 6.98e-15 77.0
Msa0835820 MtrunA17_Chr5g0443401 21.556 450 297 14 29 458 36 449 7.20e-15 77.0
Msa0835820 MtrunA17_Chr6g0449341 23.596 356 230 12 120 441 170 517 8.26e-15 77.0
Msa0835820 MtrunA17_Chr3g0089351 26.147 218 154 5 248 461 156 370 1.44e-14 75.5
Msa0835820 MtrunA17_Chr3g0089361 25.346 217 157 3 248 461 238 452 1.92e-14 75.5
Msa0835820 MtrunA17_Chr4g0044841 24.638 207 148 3 260 462 245 447 2.32e-14 75.5
Msa0835820 MtrunA17_Chr5g0429651 25.112 223 146 4 238 441 242 462 2.62e-14 75.1
Msa0835820 MtrunA17_Chr1g0203141 21.911 429 283 18 55 459 87 487 3.23e-14 75.1
Msa0835820 MtrunA17_Chr1g0153371 22.581 496 303 17 1 464 1 447 3.26e-14 74.7
Msa0835820 MtrunA17_Chr5g0431601 40.000 80 47 1 68 147 3 81 5.15e-14 67.4
Msa0835820 MtrunA17_Chr6g0457421 21.986 423 284 15 55 458 83 478 6.01e-14 74.3
Msa0835820 MtrunA17_Chr8g0371761 28.767 146 85 2 317 443 1 146 8.23e-14 68.9
Msa0835820 MtrunA17_Chr4g0067191 18.136 397 260 9 120 466 113 494 2.92e-13 72.0
Msa0835820 MtrunA17_Chr1g0154731 21.256 414 298 11 54 458 80 474 3.26e-13 71.6
Msa0835820 MtrunA17_Chr1g0163501 23.048 538 315 25 10 495 5 495 3.45e-13 71.6
Msa0835820 MtrunA17_Chr7g0227291 25.000 288 197 9 168 441 166 448 3.76e-13 71.6
Msa0835820 MtrunA17_Chr5g0445541 37.255 102 61 2 3 102 11 111 8.02e-13 65.9
Msa0835820 MtrunA17_Chr5g0445341 40.741 81 47 1 68 147 3 83 1.11e-12 63.5
Msa0835820 MtrunA17_Chr5g0430051 38.679 106 58 2 11 109 11 116 1.38e-12 64.3
Msa0835820 MtrunA17_Chr4g0014051 23.666 431 277 15 51 456 94 497 1.58e-12 69.7
Msa0835820 MtrunA17_Chr3g0107501 21.341 492 327 17 22 488 24 480 2.40e-12 68.9
Msa0835820 MtrunA17_Chr3g0113321 25.000 220 143 5 260 466 239 449 5.28e-12 68.2
Msa0835820 MtrunA17_Chr5g0446131 21.330 361 247 11 120 459 142 486 5.53e-12 68.2
Msa0835820 MtrunA17_Chr6g0479681 25.101 247 148 10 244 459 261 501 5.62e-12 68.2
Msa0835820 MtrunA17_Chr3g0116721 27.551 196 124 7 139 324 3 190 1.21e-11 63.9
Msa0835820 MtrunA17_Chr4g0004601 20.335 418 298 14 55 456 102 500 1.39e-11 66.6
Msa0835820 MtrunA17_Chr4g0026941 23.224 366 250 12 120 462 156 513 1.87e-11 66.2
Msa0835820 MtrunA17_Chr6g0458571 39.583 96 48 4 14 99 30 125 2.08e-11 61.6
Msa0835820 MtrunA17_Chr2g0310361 29.932 147 85 5 160 297 2 139 2.21e-11 62.0
Msa0835820 MtrunA17_Chr5g0404861 28.671 143 95 3 345 484 18 156 3.12e-11 62.0
Msa0835820 MtrunA17_Chr6g0463541 31.000 100 67 1 379 478 3 100 3.62e-11 60.1
Msa0835820 MtrunA17_Chr6g0484771 25.000 124 92 1 67 190 2 124 3.66e-11 61.2
Msa0835820 MtrunA17_Chr1g0184421 20.133 452 281 13 35 441 40 456 6.28e-11 64.7
Msa0835820 MtrunA17_Chr1g0163421 21.978 364 222 13 167 495 200 536 6.81e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0835820 AT4G37330.1 55.943 488 200 6 6 489 9 485 0.0 566
Msa0835820 AT4G37370.1 55.464 485 208 5 8 489 7 486 0.0 566
Msa0835820 AT4G37340.1 57.645 484 194 7 13 489 10 489 0.0 563
Msa0835820 AT5G36220.1 55.102 490 206 6 7 489 12 494 0.0 555
Msa0835820 AT4G37320.1 53.402 485 219 4 8 489 8 488 0.0 551
Msa0835820 AT4G37360.1 55.193 491 205 7 3 489 9 488 0.0 543
Msa0835820 AT3G28740.1 58.621 464 184 5 30 489 38 497 0.0 540
Msa0835820 AT5G57220.1 52.977 487 222 6 4 489 3 483 0.0 536
Msa0835820 AT2G23190.1 52.333 493 226 5 1 489 45 532 0.0 533
Msa0835820 AT4G37430.1 50.605 496 230 7 4 489 2 492 0.0 521
Msa0835820 AT4G37400.1 51.822 494 223 7 4 489 3 489 0.0 520
Msa0835820 AT2G23220.1 52.941 493 224 5 1 489 16 504 3.10e-180 516
Msa0835820 AT4G37410.1 49.495 495 239 8 5 493 4 493 4.94e-175 502
Msa0835820 AT4G37310.1 49.398 498 238 8 6 490 5 501 2.16e-168 486
Msa0835820 AT5G67310.1 47.658 491 238 7 4 487 19 497 1.10e-161 468
Msa0835820 AT1G66540.1 58.530 381 147 6 114 489 1 375 1.84e-159 458
Msa0835820 AT5G36220.2 57.585 323 133 2 167 489 30 348 3.87e-137 400
Msa0835820 AT1G66540.2 59.748 318 121 4 174 489 4 316 1.58e-135 395
Msa0835820 AT5G10600.1 42.062 485 269 6 11 487 24 504 3.54e-132 393
Msa0835820 AT5G10610.1 40.452 487 275 6 11 487 7 488 8.13e-125 374
Msa0835820 AT5G07990.1 35.603 514 304 6 1 494 1 507 4.28e-109 334
Msa0835820 AT4G31940.1 36.557 517 300 8 1 489 1 517 6.76e-104 321
Msa0835820 AT4G31970.1 35.271 516 307 8 1 489 1 516 8.56e-101 313
Msa0835820 AT5G06900.1 37.271 491 284 11 5 482 6 485 1.27e-100 311
Msa0835820 AT4G12300.1 37.100 469 277 6 30 485 41 504 3.36e-97 303
Msa0835820 AT3G25180.1 36.290 496 291 10 2 478 6 495 2.06e-95 298
Msa0835820 AT4G12320.1 36.200 500 293 9 3 485 16 506 3.59e-94 295
Msa0835820 AT3G26280.1 36.000 500 286 10 11 489 15 501 3.56e-91 287
Msa0835820 AT3G26280.2 36.000 500 286 10 11 489 32 518 3.90e-91 288
Msa0835820 AT4G12330.1 36.364 462 276 7 40 489 55 510 4.31e-91 287
Msa0835820 AT1G74550.1 33.733 501 296 12 6 491 3 482 7.36e-91 286
Msa0835820 AT5G44620.1 35.944 498 302 5 4 489 19 511 1.47e-90 286
Msa0835820 AT2G40890.1 30.891 505 330 7 3 494 2 500 2.22e-90 285
Msa0835820 AT4G31950.1 34.623 517 298 9 1 489 1 505 1.01e-88 281
Msa0835820 AT4G13310.1 35.294 476 287 9 24 485 25 493 1.43e-88 280
Msa0835820 AT3G26300.1 33.537 492 303 9 8 482 6 490 9.76e-88 278
Msa0835820 AT3G26310.1 32.735 501 314 8 5 489 3 496 1.16e-87 278
Msa0835820 AT1G01280.1 35.118 467 282 8 40 489 41 503 7.84e-87 276
Msa0835820 AT5G25120.1 33.803 497 305 8 1 483 1 487 1.25e-86 275
Msa0835820 AT3G48280.1 33.602 497 301 11 6 486 2 485 6.24e-86 273
Msa0835820 AT4G13290.1 34.615 468 281 9 30 485 32 486 8.59e-86 273
Msa0835820 AT2G45550.1 33.201 503 313 7 8 493 15 511 1.17e-85 273
Msa0835820 AT2G45560.1 33.598 503 303 8 7 485 8 503 1.18e-85 273
Msa0835820 AT3G26230.1 34.252 508 301 10 6 490 1 498 2.25e-85 272
Msa0835820 AT2G45570.1 36.095 507 292 10 4 485 5 504 2.48e-85 272
Msa0835820 AT3G26270.1 33.958 480 291 8 29 490 30 501 4.07e-85 271
Msa0835820 AT2G25160.1 33.858 508 302 11 4 484 7 507 1.07e-83 268
Msa0835820 AT4G12310.1 34.989 463 277 8 40 485 53 508 8.18e-83 266
Msa0835820 AT1G13080.1 34.731 501 302 14 8 490 9 502 2.41e-82 264
Msa0835820 AT1G74540.1 32.934 501 296 11 8 493 5 480 5.82e-82 263
Msa0835820 AT3G48310.1 33.263 472 288 10 27 485 28 485 1.14e-81 262
Msa0835820 AT5G25140.1 32.998 497 309 9 1 483 1 487 1.73e-81 262
Msa0835820 AT2G24180.1 32.990 485 293 8 26 497 31 496 1.97e-81 262
Msa0835820 AT3G26160.1 33.529 510 305 14 6 491 3 502 2.07e-81 262
Msa0835820 AT3G48270.1 31.992 472 296 10 27 486 27 485 2.09e-81 261
Msa0835820 AT3G20940.1 32.661 496 302 13 20 492 28 514 2.79e-81 262
Msa0835820 AT3G48290.1 33.403 479 293 10 20 485 21 486 4.15e-81 261
Msa0835820 AT5G25130.1 32.480 508 297 10 1 483 1 487 4.23e-81 261
Msa0835820 AT4G31500.1 33.742 489 291 12 14 479 10 488 4.48e-81 261
Msa0835820 AT2G42250.1 32.587 491 302 9 7 476 15 497 5.89e-81 261
Msa0835820 AT1G13110.1 32.353 510 309 14 5 490 7 504 3.53e-80 259
Msa0835820 AT3G26320.1 33.262 466 289 8 32 482 32 490 3.66e-80 258
Msa0835820 AT5G25180.1 32.193 497 313 9 1 483 1 487 4.34e-80 258
Msa0835820 AT3G20950.1 34.394 503 287 16 2 476 11 498 7.12e-80 258
Msa0835820 AT5G57260.1 33.403 479 293 8 23 482 22 493 1.20e-79 257
Msa0835820 AT3G48300.1 33.045 463 284 10 24 476 23 469 8.42e-79 254
Msa0835820 AT3G48300.2 33.045 463 284 10 24 476 25 471 8.88e-79 254
Msa0835820 AT4G22710.1 33.042 457 290 8 40 485 62 513 2.40e-78 254
Msa0835820 AT3G26330.1 32.415 472 297 7 26 482 26 490 4.40e-78 253
Msa0835820 AT3G61040.1 34.136 457 286 5 32 478 34 485 6.38e-78 253
Msa0835820 AT3G26180.1 32.277 505 305 13 6 483 1 495 1.03e-77 252
Msa0835820 AT3G26200.1 35.319 470 282 9 31 483 28 492 1.24e-77 252
Msa0835820 AT4G22690.1 32.823 457 291 8 40 485 93 544 3.09e-77 252
Msa0835820 AT3G26290.1 33.333 465 288 7 33 482 33 490 4.68e-77 250
Msa0835820 AT3G26170.1 31.287 505 308 13 6 483 3 495 4.98e-77 250
Msa0835820 AT3G26290.2 33.333 465 288 7 33 482 46 503 5.43e-77 251
Msa0835820 AT3G48290.2 31.881 505 292 11 20 485 21 512 1.90e-76 249
Msa0835820 AT1G33720.1 31.827 509 318 7 8 493 9 511 3.16e-76 248
Msa0835820 AT5G06905.1 31.365 491 296 11 5 464 3 483 1.44e-75 247
Msa0835820 AT1G50520.1 32.974 464 282 12 40 484 52 505 5.73e-75 246
Msa0835820 AT3G26220.1 34.722 504 302 10 8 490 4 501 1.64e-74 244
Msa0835820 AT1G13090.2 33.262 466 286 9 31 482 28 482 2.38e-74 243
Msa0835820 AT2G30770.1 31.197 468 301 9 30 484 32 491 8.62e-74 242
Msa0835820 AT3G26150.1 31.873 502 309 12 6 483 3 495 9.45e-74 242
Msa0835820 AT3G20110.1 32.292 480 298 11 12 476 17 484 1.58e-73 241
Msa0835820 AT5G04330.1 30.533 488 301 9 28 489 29 504 3.83e-73 240
Msa0835820 AT3G26190.1 32.914 477 284 10 31 483 28 492 4.71e-73 240
Msa0835820 AT3G32047.1 32.035 462 285 12 42 486 53 502 9.17e-73 239
Msa0835820 AT3G52970.1 32.283 508 306 12 8 485 10 509 9.71e-73 239
Msa0835820 AT4G15330.1 30.063 479 304 9 13 473 20 485 1.68e-72 239
Msa0835820 AT4G36220.1 30.435 483 291 9 38 489 47 515 2.24e-72 239
Msa0835820 AT3G48320.1 31.000 500 317 10 1 486 1 486 2.32e-72 238
Msa0835820 AT3G53280.1 33.970 471 285 10 31 483 28 490 3.80e-72 238
Msa0835820 AT3G26210.1 33.191 470 291 8 38 490 38 501 7.80e-72 237
Msa0835820 AT1G11610.2 30.271 479 312 9 24 489 27 496 1.42e-71 236
Msa0835820 AT3G20140.1 31.568 472 299 10 20 476 28 490 2.03e-71 236
Msa0835820 AT3G44250.1 33.902 469 287 9 31 482 28 490 1.62e-70 233
Msa0835820 AT1G11610.1 30.802 474 306 9 24 484 27 491 3.43e-70 232
Msa0835820 AT4G13770.1 30.924 498 309 14 6 483 11 493 4.00e-70 232
Msa0835820 AT4G15360.1 29.572 514 323 13 4 498 11 504 4.45e-70 233
Msa0835820 AT2G30750.1 31.733 479 306 8 19 484 21 491 7.11e-70 231
Msa0835820 AT5G47990.1 33.043 460 281 10 42 484 53 502 1.33e-69 231
Msa0835820 AT4G15350.1 32.747 455 275 13 42 476 45 488 2.15e-69 231
Msa0835820 AT3G52970.2 31.418 522 306 13 8 485 10 523 2.51e-69 231
Msa0835820 AT3G20130.1 30.573 471 293 11 42 491 53 510 3.82e-69 230
Msa0835820 AT2G02580.1 32.596 497 310 9 2 482 3 490 8.26e-69 229
Msa0835820 AT5G24950.1 31.343 469 296 12 30 482 31 489 8.69e-69 228
Msa0835820 AT2G45580.1 32.120 467 288 8 41 488 48 504 1.83e-68 228
Msa0835820 AT3G20100.1 32.222 450 281 9 40 473 50 491 2.69e-68 228
Msa0835820 AT3G20090.2 31.696 448 281 10 42 473 54 492 4.95e-68 227
Msa0835820 AT2G14100.1 33.129 489 295 15 8 476 18 494 5.00e-68 227
Msa0835820 AT3G20080.2 31.866 477 294 13 30 488 41 504 1.89e-67 226
Msa0835820 AT3G20080.1 31.866 477 294 13 30 488 41 504 1.89e-67 226
Msa0835820 AT4G13310.2 35.310 371 228 6 24 389 25 388 9.01e-67 220
Msa0835820 AT5G42580.1 31.788 453 274 11 52 489 61 493 1.03e-66 223
Msa0835820 AT3G20120.4 31.602 462 285 11 42 484 52 501 1.42e-66 223
Msa0835820 AT5G42590.1 32.252 493 308 10 8 482 6 490 3.68e-66 222
Msa0835820 AT5G05260.2 29.116 498 317 13 8 472 11 505 1.78e-65 221
Msa0835820 AT2G30490.1 31.633 490 300 10 7 473 9 486 1.50e-64 218
Msa0835820 AT1G13710.1 34.974 386 227 10 117 488 134 509 1.91e-64 218
Msa0835820 AT2G46660.1 30.515 485 299 13 25 495 64 524 4.11e-64 217
Msa0835820 AT3G26830.1 29.472 492 321 10 1 479 1 479 4.76e-64 216
Msa0835820 AT5G24960.1 31.393 481 303 11 19 482 20 490 2.63e-63 214
Msa0835820 AT1G50560.1 32.906 468 284 13 42 489 54 511 2.89e-63 214
Msa0835820 AT4G15330.2 28.392 479 284 10 13 473 20 457 5.46e-63 213
Msa0835820 AT4G39950.1 29.283 502 314 13 2 471 22 514 9.73e-63 214
Msa0835820 AT5G09970.1 30.545 514 311 15 5 492 35 528 1.49e-62 213
Msa0835820 AT4G39950.2 29.283 502 314 13 2 471 62 554 2.08e-62 214
Msa0835820 AT3G61880.1 31.288 489 303 12 21 495 56 525 2.87e-62 212
Msa0835820 AT3G61880.2 31.224 490 302 13 21 495 56 525 4.97e-62 212
Msa0835820 AT1G01190.2 30.973 452 281 11 22 458 69 504 8.38e-62 211
Msa0835820 AT1G01190.1 30.973 452 281 11 22 458 64 499 8.65e-62 211
Msa0835820 AT4G15380.1 31.140 456 269 14 58 494 70 499 1.03e-61 210
Msa0835820 AT2G27000.1 31.049 467 289 11 42 492 50 499 1.65e-61 210
Msa0835820 AT3G25180.2 34.908 381 228 8 2 368 6 380 1.95e-61 206
Msa0835820 AT3G20130.2 30.641 421 259 10 91 491 75 482 2.07e-61 209
Msa0835820 AT2G22330.1 29.039 489 318 12 7 471 33 516 2.32e-61 210
Msa0835820 AT2G22330.2 29.039 489 318 12 7 471 56 539 3.96e-61 210
Msa0835820 AT5G05260.1 28.659 492 295 12 8 472 11 473 6.55e-61 207
Msa0835820 AT1G28430.1 29.389 507 327 9 1 492 10 500 1.64e-60 207
Msa0835820 AT1G33730.1 34.501 371 215 8 133 484 5 366 2.53e-60 202
Msa0835820 AT1G33730.2 34.501 371 215 8 133 484 5 366 2.53e-60 202
Msa0835820 AT1G58260.1 27.655 499 332 11 2 473 8 504 3.92e-60 206
Msa0835820 AT3G20960.2 29.748 437 282 10 56 476 67 494 1.12e-59 205
Msa0835820 AT1G74110.1 30.695 518 308 16 8 488 30 533 1.56e-59 205
Msa0835820 AT1G13100.1 29.386 456 293 13 41 477 38 483 1.92e-58 201
Msa0835820 AT3G53300.1 30.233 473 306 11 29 483 26 492 5.93e-58 200
Msa0835820 AT1G79370.1 29.608 510 311 15 3 472 15 516 6.41e-58 201
Msa0835820 AT1G16410.1 28.542 487 310 11 4 459 18 497 4.90e-57 198
Msa0835820 AT5G04630.1 28.210 514 326 12 4 489 10 508 1.29e-56 197
Msa0835820 AT5G35715.1 29.372 446 291 12 68 495 3 442 1.62e-56 194
Msa0835820 AT2G45580.2 36.446 332 185 7 179 491 31 355 4.55e-56 191
Msa0835820 AT1G16400.1 28.205 468 296 11 24 459 37 496 4.70e-56 196
Msa0835820 AT1G33720.4 31.771 384 240 5 126 493 2 379 1.69e-55 190
Msa0835820 AT1G33720.3 31.771 384 240 5 126 493 2 379 1.69e-55 190
Msa0835820 AT1G33720.5 31.771 384 240 5 126 493 2 379 1.69e-55 190
Msa0835820 AT2G25160.2 32.576 396 242 9 4 381 7 395 1.81e-55 191
Msa0835820 AT4G20240.1 30.612 392 254 8 31 415 33 413 5.00e-55 191
Msa0835820 AT3G10560.1 28.423 482 309 12 30 489 45 512 5.36e-54 190
Msa0835820 AT3G20120.2 32.361 377 225 10 126 484 1 365 9.04e-54 186
Msa0835820 AT3G20120.3 32.361 377 225 10 126 484 1 365 9.04e-54 186
Msa0835820 AT3G20120.1 32.361 377 225 10 126 484 1 365 9.04e-54 186
Msa0835820 AT2G05180.1 30.500 400 257 9 42 429 52 442 1.10e-53 187
Msa0835820 AT3G20960.1 30.729 384 241 10 109 476 17 391 1.43e-53 186
Msa0835820 AT5G04660.1 29.961 514 316 14 3 489 15 511 1.91e-53 188
Msa0835820 AT1G64940.1 27.606 518 336 12 1 489 1 508 1.32e-52 186
Msa0835820 AT3G20090.1 32.231 363 222 9 126 473 1 354 3.10e-52 182
Msa0835820 AT1G13080.2 32.884 371 225 13 138 490 20 384 4.03e-52 181
Msa0835820 AT3G20935.1 34.568 324 158 10 194 473 4 317 5.93e-52 180
Msa0835820 AT1G33720.2 30.562 409 237 8 126 493 2 404 8.15e-52 181
Msa0835820 AT2G27010.1 30.894 492 285 12 20 493 24 478 3.01e-51 182
Msa0835820 AT3G61040.2 31.667 360 239 3 32 389 34 388 3.17e-50 177
Msa0835820 AT5G25900.1 27.941 476 325 10 27 489 37 507 3.78e-49 176
Msa0835820 AT3G20080.4 36.122 263 148 7 241 488 110 367 9.57e-49 172
Msa0835820 AT3G20080.5 36.122 263 148 7 241 488 110 367 9.57e-49 172
Msa0835820 AT3G20080.6 36.122 263 148 7 241 488 110 367 9.57e-49 172
Msa0835820 AT3G20080.3 36.122 263 148 7 241 488 110 367 9.57e-49 172
Msa0835820 AT1G64930.1 27.033 492 311 13 31 489 32 508 1.70e-48 175
Msa0835820 AT1G11600.1 28.817 524 307 19 8 489 10 509 3.41e-48 174
Msa0835820 AT2G12190.1 27.347 490 313 11 31 489 32 509 3.42e-48 174
Msa0835820 AT5G35917.1 27.623 467 275 13 30 473 41 467 7.51e-48 172
Msa0835820 AT1G64950.1 26.639 488 317 11 31 489 32 507 8.03e-47 170
Msa0835820 AT4G20240.2 30.137 365 238 7 31 389 33 386 1.16e-46 167
Msa0835820 AT3G10570.1 28.477 453 290 12 58 489 73 512 1.28e-45 167
Msa0835820 AT5G61320.1 28.820 517 310 14 1 489 1 487 1.50e-44 164
Msa0835820 AT5G24960.2 30.871 379 244 8 19 389 20 388 1.74e-44 161
Msa0835820 AT1G16410.2 28.713 404 260 10 4 386 18 414 2.28e-44 162
Msa0835820 AT3G26180.2 36.111 252 144 6 248 483 111 361 2.85e-42 154
Msa0835820 AT3G26180.2 35.577 104 63 1 11 110 6 109 4.34e-12 68.2
Msa0835820 AT3G03470.1 26.796 515 330 12 2 484 5 504 3.13e-42 157
Msa0835820 AT2G45580.3 30.278 360 233 5 41 389 48 400 3.66e-42 155
Msa0835820 AT1G64900.1 26.667 480 310 11 38 489 38 503 3.45e-39 149
Msa0835820 AT3G53290.1 28.777 417 264 11 85 490 12 406 5.14e-36 138
Msa0835820 AT1G13090.1 28.623 276 185 5 31 299 28 298 5.71e-27 110
Msa0835820 AT2G26170.1 23.016 504 341 14 12 483 27 515 2.62e-25 109
Msa0835820 AT1G31800.1 25.263 475 301 16 50 497 131 578 4.26e-25 109
Msa0835820 AT1G19630.1 28.251 223 151 4 249 464 232 452 3.61e-24 105
Msa0835820 AT2G26710.1 25.662 491 303 15 6 456 16 484 6.07e-24 105
Msa0835820 AT2G45560.2 25.817 306 193 7 7 290 8 301 1.05e-23 102
Msa0835820 AT1G19630.3 28.182 220 149 4 249 461 232 449 8.25e-23 101
Msa0835820 AT4G27710.1 23.490 447 296 18 55 476 87 512 4.65e-21 96.7
Msa0835820 AT2G26170.2 27.092 251 167 5 248 483 183 432 5.93e-21 95.9
Msa0835820 AT1G05160.2 25.330 454 289 17 31 464 45 468 8.05e-21 95.9
Msa0835820 AT1G05160.1 25.330 454 289 17 31 464 45 468 8.05e-21 95.9
Msa0835820 AT2G45560.3 26.749 243 154 5 7 236 8 239 1.01e-20 91.7
Msa0835820 AT3G14640.1 24.242 429 275 17 51 456 82 483 3.40e-20 94.0
Msa0835820 AT3G14640.2 24.242 429 275 17 51 456 104 505 5.95e-20 93.2
Msa0835820 AT2G45510.1 23.706 367 251 11 120 463 123 483 6.27e-20 93.2
Msa0835820 AT1G75130.1 24.342 456 310 16 17 459 42 475 7.88e-20 92.8
Msa0835820 AT5G38970.1 23.651 482 307 19 6 466 5 446 1.16e-19 92.0
Msa0835820 AT4G15110.1 28.814 236 129 7 288 489 346 576 2.11e-19 91.7
Msa0835820 AT2G44890.1 22.826 368 253 9 120 463 123 483 4.08e-19 90.5
Msa0835820 AT5G45340.1 23.629 474 300 17 6 462 10 438 4.81e-19 90.1
Msa0835820 AT3G14630.1 24.524 420 279 15 53 456 80 477 1.05e-18 89.4
Msa0835820 AT4G20235.1 27.660 282 160 8 8 277 3 252 1.25e-18 87.4
Msa0835820 AT2G44890.2 22.563 359 247 8 120 463 123 465 1.25e-18 89.0
Msa0835820 AT3G14630.2 24.524 420 279 15 53 456 135 532 1.47e-18 89.0
Msa0835820 AT1G73340.1 24.008 504 317 17 2 482 17 477 1.47e-18 89.0
Msa0835820 AT2G32440.2 24.160 476 295 19 4 449 11 450 1.52e-18 89.0
Msa0835820 AT2G32440.1 24.160 476 295 19 4 449 11 450 1.52e-18 89.0
Msa0835820 AT3G14610.1 22.892 415 276 15 62 456 91 481 1.74e-18 88.6
Msa0835820 AT5G38970.2 27.679 224 149 6 251 466 147 365 2.34e-18 87.4
Msa0835820 AT5G38970.4 27.679 224 149 6 251 466 147 365 2.34e-18 87.4
Msa0835820 AT2G42850.1 25.316 237 164 6 242 468 233 466 2.39e-18 88.2
Msa0835820 AT1G12740.1 22.292 480 309 14 8 461 5 446 2.43e-18 88.2
Msa0835820 AT4G19230.1 22.774 483 305 18 1 462 3 438 2.55e-18 87.8
Msa0835820 AT2G29090.2 23.937 447 294 11 31 465 49 461 2.90e-18 87.8
Msa0835820 AT2G29090.1 23.937 447 294 11 31 465 49 461 2.90e-18 87.8
Msa0835820 AT3G19270.2 23.043 460 299 12 24 465 23 445 3.98e-18 87.4
Msa0835820 AT3G30180.1 22.661 481 310 16 6 466 8 446 5.58e-18 87.0
Msa0835820 AT1G63710.1 22.034 472 302 12 14 441 12 461 6.32e-18 87.0
Msa0835820 AT4G39490.1 21.938 547 324 19 9 488 9 519 8.46e-18 86.7
Msa0835820 AT1G12740.2 24.342 304 205 9 177 461 155 452 1.21e-17 85.9
Msa0835820 AT2G34490.1 22.244 508 344 21 1 488 11 487 1.38e-17 85.9
Msa0835820 AT5G58860.1 21.351 459 304 11 21 441 23 462 1.74e-17 85.5
Msa0835820 AT5G23190.1 23.822 382 238 13 123 467 155 520 2.72e-17 85.1
Msa0835820 AT4G19230.2 22.656 512 322 19 1 491 3 461 2.87e-17 84.7
Msa0835820 AT2G45970.1 23.173 479 301 15 6 441 10 464 3.19e-17 84.7
Msa0835820 AT5G45340.2 23.195 457 293 15 6 447 10 423 3.76e-17 84.3
Msa0835820 AT2G46950.1 22.947 414 279 13 61 456 148 539 6.18e-17 84.0
Msa0835820 AT4G39510.1 25.857 321 212 10 169 467 169 485 7.49e-17 83.6
Msa0835820 AT1G11680.1 26.638 229 154 5 241 457 229 455 7.52e-17 83.6
Msa0835820 AT3G53130.1 22.538 457 292 15 61 483 107 535 7.55e-17 83.6
Msa0835820 AT2G28850.1 25.926 216 142 8 267 469 259 469 1.20e-16 82.8
Msa0835820 AT5G35920.1 33.858 127 74 3 355 472 6 131 1.47e-16 77.4
Msa0835820 AT2G28860.1 21.271 362 252 13 119 467 126 467 1.51e-16 82.8
Msa0835820 AT1G12740.4 22.062 485 310 15 8 461 5 452 1.97e-16 82.0
Msa0835820 AT1G24540.1 20.417 480 313 12 34 466 42 499 3.27e-16 81.6
Msa0835820 AT3G19270.1 22.517 453 296 12 24 458 23 438 3.68e-16 81.3
Msa0835820 AT3G14650.1 22.673 419 281 16 60 459 90 484 3.94e-16 81.3
Msa0835820 AT1G57750.1 21.811 541 316 19 1 480 3 497 6.26e-16 80.9
Msa0835820 AT3G14680.1 23.317 416 282 16 60 459 90 484 7.15e-16 80.5
Msa0835820 AT2G29090.3 27.650 217 150 4 254 465 152 366 1.37e-15 79.0
Msa0835820 AT3G53305.1 36.957 138 84 1 336 470 175 312 1.86e-15 78.2
Msa0835820 AT2G46960.2 22.634 486 326 16 13 464 24 493 3.80e-15 78.2
Msa0835820 AT5G02900.1 24.609 256 177 8 246 486 226 480 1.01e-14 77.0
Msa0835820 AT1G65340.1 23.054 334 209 8 169 471 171 487 1.57e-14 76.3
Msa0835820 AT1G47620.1 26.562 256 158 9 238 467 244 495 2.20e-14 75.9
Msa0835820 AT5G05690.3 27.660 188 128 3 286 466 144 330 2.67e-14 74.7
Msa0835820 AT1G19630.2 27.273 176 119 4 249 417 232 405 3.51e-14 75.1
Msa0835820 AT5G24900.1 20.957 439 298 14 45 456 80 496 3.89e-14 75.1
Msa0835820 AT5G38450.1 22.000 500 326 15 3 456 4 485 5.07e-14 74.7
Msa0835820 AT5G05690.1 27.660 188 128 3 286 466 263 449 6.17e-14 74.3
Msa0835820 AT1G13140.1 23.362 351 233 11 120 441 135 478 8.54e-14 74.3
Msa0835820 AT4G39480.1 24.332 337 202 10 169 466 170 492 1.16e-13 73.6
Msa0835820 AT3G26125.1 22.881 354 237 8 121 441 136 486 1.27e-13 73.6
Msa0835820 AT5G52400.1 25.664 226 154 7 242 457 268 489 1.43e-13 73.6
Msa0835820 AT2G46960.1 24.022 358 247 12 120 464 32 377 1.73e-13 72.8
Msa0835820 AT3G14620.1 26.222 225 155 5 242 456 261 484 2.07e-13 72.8
Msa0835820 AT5G24900.2 28.313 166 109 5 298 456 217 379 2.61e-13 72.0
Msa0835820 AT5G24910.1 28.571 168 110 5 298 458 339 503 1.43e-12 70.5
Msa0835820 AT1G13140.2 23.684 342 217 13 120 441 135 452 2.83e-12 69.3
Msa0835820 AT5G36110.1 22.467 454 294 17 30 461 33 450 2.90e-12 69.3
Msa0835820 AT5G14400.1 25.110 227 142 5 245 464 136 341 3.29e-12 68.6
Msa0835820 AT5G14400.2 25.110 227 142 5 245 464 190 395 3.30e-12 68.9
Msa0835820 AT1G57750.2 21.598 463 270 17 1 416 3 419 1.56e-11 66.6
Msa0835820 AT3G56630.1 23.828 256 157 7 255 495 262 494 1.66e-11 67.0
Msa0835820 AT1G78490.1 21.806 454 306 14 31 466 35 457 2.34e-11 66.2
Msa0835820 AT1G34540.1 23.171 246 167 6 239 469 241 479 2.93e-11 66.2

Find 97 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCCATCTTCATTATTTC+TGG 0.107389 5_4:-9239794 None:intergenic
TTCATAGAGATCCAAATTTA+TGG 0.157024 5_4:+9240026 Msa0835820:CDS
GATCTTATATTTGTTGATTA+TGG 0.184269 5_4:-9237297 None:intergenic
ACACTTGTCTTGAGTTTATT+AGG 0.201684 5_4:-9237337 None:intergenic
TCATCGTTTAAATTCCTTCT+TGG 0.204603 5_4:+9237789 Msa0835820:CDS
CCACAATGTCTTCCTATAAT+TGG 0.242812 5_4:+9237481 Msa0835820:CDS
GTAGGATCACTCCATAAATT+TGG 0.253768 5_4:-9240037 None:intergenic
TTCTTAACTGGAAAATATAT+TGG 0.254432 5_4:+9237679 Msa0835820:CDS
ATTAAAGAGGTTGTTAGTTT+AGG 0.281330 5_4:+9238012 Msa0835820:CDS
TTCTGGATGGTTTAGTAAAC+TGG 0.282055 5_4:-9239777 None:intergenic
ATGGCCAAATCTTCTCTCTT+TGG 0.282885 5_4:+9237563 Msa0835820:CDS
CTTATTGATGAACATCGTTT+TGG 0.284979 5_4:+9238147 Msa0835820:CDS
TTTCATTTGGGTTGGGTAGA+AGG 0.291058 5_4:+9240110 Msa0835820:CDS
ATCTTATATTTGTTGATTAT+GGG 0.292347 5_4:-9237296 None:intergenic
GTAAATAAACTACTTTCATT+TGG 0.296809 5_4:+9240097 Msa0835820:CDS
GCGACATCCATTGAATATTA+AGG 0.308401 5_4:+9240297 Msa0835820:CDS
AACCGACCTCATTTCTTAAC+TGG 0.318085 5_4:+9237667 Msa0835820:CDS
GACAAATGAGGTACTAATAA+TGG 0.327547 5_4:-9239932 None:intergenic
TCAAATCATCAAAGGACTTA+TGG 0.328045 5_4:+9238242 Msa0835820:CDS
TAAATAAACTACTTTCATTT+GGG 0.347425 5_4:+9240098 Msa0835820:CDS
TGGTGAAGGTTTCCAATTAT+AGG 0.347482 5_4:-9237493 None:intergenic
CAAATCTTCTCTCTTTGGTT+CGG 0.362758 5_4:+9237568 Msa0835820:CDS
CGAACCAAAGAGAGAAGATT+TGG 0.367510 5_4:-9237567 None:intergenic
CCTTCTTTCTCAAACCTCTC+TGG 0.367941 5_4:-9240070 None:intergenic
AAGGACTGTGGGATTGACTT+TGG 0.382667 5_4:+9240159 Msa0835820:CDS
AGGACTGTGGGATTGACTTT+GGG 0.383992 5_4:+9240160 Msa0835820:CDS
TAGACAATGCTTTGAAGATA+AGG 0.387652 5_4:-9239881 None:intergenic
TTCATTTGGGTTGGGTAGAA+GGG 0.397318 5_4:+9240111 Msa0835820:CDS
AAGTCAATCCCACAGTCCTT+TGG 0.405064 5_4:-9240156 None:intergenic
AGTCAATCCCACAGTCCTTT+GGG 0.405276 5_4:-9240155 None:intergenic
AAAGAGGTTGTTAGTTTAGG+AGG 0.405671 5_4:+9238015 Msa0835820:CDS
GTGTCGGGGAAAAGATACTA+TGG 0.406603 5_4:+9237937 Msa0835820:CDS
ACTTATGAGTTGTGTAAAAC+AGG 0.409417 5_4:+9240406 Msa0835820:three_prime_UTR
ATCACAACCTGAGTATTATA+CGG 0.412458 5_4:+9238218 Msa0835820:CDS
TTGTAGGTTATGTTACTTGC+GGG 0.413577 5_4:+9239716 Msa0835820:intron
TAAACTACTTTCATTTGGGT+TGG 0.415086 5_4:+9240102 Msa0835820:CDS
GGTGGAGTGGTTGTTTGAGT+TGG 0.419068 5_4:-9237513 None:intergenic
TTGGGTAGAAGGGCTTGTCC+TGG 0.430504 5_4:+9240121 Msa0835820:CDS
TTAAAGGTTAATTAAGTAAG+TGG 0.440399 5_4:+9240480 Msa0835820:three_prime_UTR
GCTAGACAACATTCTTCAAA+AGG 0.446227 5_4:-9240444 None:intergenic
AAACTACTTTCATTTGGGTT+GGG 0.451196 5_4:+9240103 Msa0835820:CDS
AAAACATCCTTAATATTCAA+TGG 0.453871 5_4:-9240304 None:intergenic
CCATCTTCATTATTTCTGGA+TGG 0.458306 5_4:-9239790 None:intergenic
GTTTAGAGAGATAATTAAAG+AGG 0.466299 5_4:+9237999 Msa0835820:CDS
AGAGCTTCAAAGTGATGATA+AGG 0.469651 5_4:-9237417 None:intergenic
ATTGACATGGTTGAAGCAAA+AGG 0.476643 5_4:+9240229 Msa0835820:CDS
CAATTATAGGAAGACATTGT+GGG 0.480038 5_4:-9237480 None:intergenic
TACGTCGAAGATTGCGCCAA+TGG 0.485304 5_4:-9237741 None:intergenic
ACTATAATGAGAATGGTGTC+GGG 0.488291 5_4:+9237922 Msa0835820:CDS
TACTATAATGAGAATGGTGT+CGG 0.488543 5_4:+9237921 Msa0835820:CDS
ATAGGAAGACATTGTGGGCC+TGG 0.489671 5_4:-9237475 None:intergenic
ATCTCTTCGTATTTCCAAGA+AGG 0.491207 5_4:-9237803 None:intergenic
CTTTGGGCTAAGCTTTCTCC+AGG 0.494738 5_4:-9240139 None:intergenic
TTGTGTAAAACAGGCTCATA+TGG 0.495874 5_4:+9240415 Msa0835820:three_prime_UTR
GGTAAAACATTCTTGTGTCA+TGG 0.505942 5_4:-9237623 None:intergenic
CATCATCCGTGACATTAGAA+TGG 0.506318 5_4:+9239747 Msa0835820:CDS
TTGTCTTGAGTTTATTAGGA+TGG 0.508016 5_4:-9237333 None:intergenic
GACATTGTGGGCCTGGTGGA+AGG 0.512111 5_4:-9237468 None:intergenic
ATCATCCGTGACATTAGAAT+GGG 0.515615 5_4:+9239748 Msa0835820:CDS
ACGGTAGCACAATCACCTTA+TGG 0.516359 5_4:+9237715 Msa0835820:CDS
CCAATTATAGGAAGACATTG+TGG 0.520543 5_4:-9237481 None:intergenic
ATTTAATACTATAATGAGAA+TGG 0.523047 5_4:+9237915 Msa0835820:CDS
TGGGATATTATATCCTCCTA+AGG 0.526306 5_4:-9239969 None:intergenic
TTGCGCCAATGGTCACCATA+AGG 0.527903 5_4:-9237730 None:intergenic
AATCACCTTATGGTGACCAT+TGG 0.528124 5_4:+9237725 Msa0835820:CDS
CCAGAGAGGTTTGAGAAAGA+AGG 0.530246 5_4:+9240070 Msa0835820:CDS
CCATCCAGAAATAATGAAGA+TGG 0.533024 5_4:+9239790 Msa0835820:CDS
GTGGTTGTTTGAGTTGGTGA+AGG 0.533074 5_4:-9237507 None:intergenic
AGCTTAGCCCAAAGGACTGT+GGG 0.533530 5_4:+9240148 Msa0835820:CDS
ATTTGATCCGTATAATACTC+AGG 0.536875 5_4:-9238225 None:intergenic
GTGTGGAATGTGTGGTGGAG+TGG 0.543011 5_4:-9237526 None:intergenic
GAGGTTTGAGAAAGAAGGTG+AGG 0.561986 5_4:+9240075 Msa0835820:CDS
AATGTCATCTCCGAAAACAT+AGG 0.567870 5_4:-9237895 None:intergenic
GAGCTGCTGCATGTAGTCGA+AGG 0.574808 5_4:-9239910 None:intergenic
GTGATAAGGTGTGGAATGTG+TGG 0.590721 5_4:-9237534 None:intergenic
TATACGGATCAAATCATCAA+AGG 0.594760 5_4:+9238234 Msa0835820:CDS
CATAGCCCATTCTAATGTCA+CGG 0.604483 5_4:-9239753 None:intergenic
CTGGAGAAAGCTTAGCCCAA+AGG 0.607343 5_4:+9240140 Msa0835820:CDS
CTCTCTGGCTTAAAACATGT+AGG 0.609242 5_4:-9240055 None:intergenic
AAATCTTCTGAAGACAAATG+AGG 0.612691 5_4:-9239944 None:intergenic
TTGTGATGTGAGTGATGTTG+AGG 0.613710 5_4:+9237966 Msa0835820:CDS
TTTGTAGGTTATGTTACTTG+CGG 0.620793 5_4:+9239715 Msa0835820:intron
AGCTGCTGCATGTAGTCGAA+GGG 0.623440 5_4:-9239909 None:intergenic
GGAAGACATTGTGGGCCTGG+TGG 0.624439 5_4:-9237472 None:intergenic
GGTTGAAGCAAAAGGAATCA+CGG 0.625485 5_4:+9240237 Msa0835820:CDS
ATAAGGTGTGGAATGTGTGG+TGG 0.625825 5_4:-9237531 None:intergenic
TGTTAAGAGATGATCAATCA+TGG 0.631404 5_4:-9238187 None:intergenic
AAGCTTAGCCCAAAGGACTG+TGG 0.633917 5_4:+9240147 Msa0835820:CDS
AATGAGTTGGACACTCACAT+AGG 0.637656 5_4:+9239818 Msa0835820:CDS
TTCCAGTTAAGAAATGAGGT+CGG 0.637763 5_4:-9237669 None:intergenic
TATTAGGATGGAATGTGAAG+TGG 0.638413 5_4:-9237321 None:intergenic
CTATAATGAGAATGGTGTCG+GGG 0.638630 5_4:+9237923 Msa0835820:CDS
AATCATCAAAGGACTTATGG+TGG 0.639977 5_4:+9238245 Msa0835820:CDS
GAAGCAAAAGGAATCACGGT+GGG 0.648227 5_4:+9240241 Msa0835820:CDS
TATTGGCTACAACAATACTA+CGG 0.652588 5_4:+9237696 Msa0835820:CDS
TTAGGAGGAGCTAACAACGC+TGG 0.665612 5_4:+9238030 Msa0835820:CDS
TGAAGCAAAAGGAATCACGG+TGG 0.782682 5_4:+9240240 Msa0835820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATATAAAGAAAAATCA+TGG - chr5_4:9238342-9238361 None:intergenic 10.0%
!! AAAGTTTAGTTATATAAAAA+TGG + chr5_4:9239302-9239321 Msa0835820:intron 10.0%
!! AAGTTTAGTTATATAAAAAT+GGG + chr5_4:9239303-9239322 Msa0835820:intron 10.0%
!!! ATCTTATATTTGTTGATTAT+GGG - chr5_4:9237299-9237318 None:intergenic 15.0%
!! ATTTAATACTATAATGAGAA+TGG + chr5_4:9237915-9237934 Msa0835820:CDS 15.0%
!!! TTTTTGTGTATTTAATTGAT+AGG + chr5_4:9238933-9238952 Msa0835820:intron 15.0%
!! AAATCAAATACATATTGTTT+AGG + chr5_4:9238982-9239001 Msa0835820:intron 15.0%
!! AATCAAATACATATTGTTTA+GGG + chr5_4:9238983-9239002 Msa0835820:intron 15.0%
!!! GTTTTCTATTATTACTAAAA+AGG + chr5_4:9239054-9239073 Msa0835820:intron 15.0%
!! CGATTAAAATTGATAAATTA+AGG - chr5_4:9239168-9239187 None:intergenic 15.0%
!! AGTATTTAAATTAGAAAATG+AGG + chr5_4:9239476-9239495 Msa0835820:intron 15.0%
!! GTATTTAAATTAGAAAATGA+GGG + chr5_4:9239477-9239496 Msa0835820:intron 15.0%
!! ATCAAAATCAAATCAAAATA+AGG + chr5_4:9239639-9239658 Msa0835820:intron 15.0%
!! AATCAAAATAAGGTAAAATT+AGG + chr5_4:9239649-9239668 Msa0835820:intron 15.0%
!! TAAATAAACTACTTTCATTT+GGG + chr5_4:9240098-9240117 Msa0835820:CDS 15.0%
!!! GATCTTATATTTGTTGATTA+TGG - chr5_4:9237300-9237319 None:intergenic 20.0%
!!! ACTCATTTTTTGTTGATTAT+GGG - chr5_4:9237365-9237384 None:intergenic 20.0%
!!! TACTCATTTTTTGTTGATTA+TGG - chr5_4:9237366-9237385 None:intergenic 20.0%
!! TTCTTAACTGGAAAATATAT+TGG + chr5_4:9237679-9237698 Msa0835820:CDS 20.0%
!!! TCCATACATTTACTTTTTAA+AGG + chr5_4:9238481-9238500 Msa0835820:intron 20.0%
!!! ACCTTTAAAAAGTAAATGTA+TGG - chr5_4:9238485-9238504 None:intergenic 20.0%
!!! TCCATACATTTACTTTTTAA+AGG + chr5_4:9238481-9238500 Msa0835820:intron 20.0%
!!! ACCTTTAAAAAGTAAATGTA+TGG - chr5_4:9238485-9238504 None:intergenic 20.0%
!!! GGAAAAAAATTAGTCTTATA+TGG + chr5_4:9238954-9238973 Msa0835820:intron 20.0%
!!! CTATTTTTGATTCACAATAT+TGG - chr5_4:9239263-9239282 None:intergenic 20.0%
!! AATGGGTAAAAAGTTTAATA+AGG + chr5_4:9239320-9239339 Msa0835820:intron 20.0%
!! TCTCTATGTAAAAATATAGA+CGG - chr5_4:9239351-9239370 None:intergenic 20.0%
!!! TATATTTTTACATAGAGAAG+AGG + chr5_4:9239353-9239372 Msa0835820:intron 20.0%
!!! ATATTTTTACATAGAGAAGA+GGG + chr5_4:9239354-9239373 Msa0835820:intron 20.0%
!! TTCAACTTCTCATATTAATT+AGG - chr5_4:9239447-9239466 None:intergenic 20.0%
!! ATATGAGAAGTTGAAAATAA+AGG + chr5_4:9239452-9239471 Msa0835820:intron 20.0%
!!! ATTTTGATGTGTTTGTAATT+AGG - chr5_4:9239627-9239646 None:intergenic 20.0%
!!! TTGTAGTGATATTGATATTT+TGG + chr5_4:9239686-9239705 Msa0835820:intron 20.0%
!! GTAAATAAACTACTTTCATT+TGG + chr5_4:9240097-9240116 Msa0835820:CDS 20.0%
!! AAAACATCCTTAATATTCAA+TGG - chr5_4:9240307-9240326 None:intergenic 20.0%
!!! AGCAATACTCATATTTTTAA+AGG + chr5_4:9240464-9240483 Msa0835820:three_prime_UTR 20.0%
!! TTAAAGGTTAATTAAGTAAG+TGG + chr5_4:9240480-9240499 Msa0835820:three_prime_UTR 20.0%
!! TATTTTCCAGTTAAGAAATG+AGG - chr5_4:9237676-9237695 None:intergenic 25.0%
! TTAGCACAAAAATCATACAA+TGG + chr5_4:9237850-9237869 Msa0835820:CDS 25.0%
! GTTTAGAGAGATAATTAAAG+AGG + chr5_4:9237999-9238018 Msa0835820:CDS 25.0%
!! ATTAAAGAGGTTGTTAGTTT+AGG + chr5_4:9238012-9238031 Msa0835820:CDS 25.0%
!!! GTGATTTTTTGGGTTTTTTA+AGG + chr5_4:9238052-9238071 Msa0835820:CDS 25.0%
!!! ATTTTTTGGGTTTTTTAAGG+TGG + chr5_4:9238055-9238074 Msa0835820:CDS 25.0%
!!! ATTTTGATGGTTTGGAAAAA+AGG + chr5_4:9238082-9238101 Msa0835820:CDS 25.0%
!!! ATATTTTCGTGTTATTAGTG+TGG + chr5_4:9238376-9238395 Msa0835820:intron 25.0%
!! AGTAAATGTATGGATTTGTT+GGG - chr5_4:9238475-9238494 None:intergenic 25.0%
! AAGTAAATGTATGGATTTGT+TGG - chr5_4:9238476-9238495 None:intergenic 25.0%
!!! ACTTTTTAAAGGTTACTGAA+TGG + chr5_4:9238492-9238511 Msa0835820:intron 25.0%
!!! ATATTTTCGTGTTATTAGTG+TGG + chr5_4:9238376-9238395 Msa0835820:intron 25.0%
!! AGTAAATGTATGGATTTGTT+GGG - chr5_4:9238475-9238494 None:intergenic 25.0%
! AAGTAAATGTATGGATTTGT+TGG - chr5_4:9238476-9238495 None:intergenic 25.0%
!!! ACTTTTTAAAGGTTACTGAA+TGG + chr5_4:9238492-9238511 Msa0835820:intron 25.0%
! ATAGCATTTACTATATAGCT+AGG + chr5_4:9238798-9238817 Msa0835820:intron 25.0%
! GGTAAAAAGTTTAATAAGGA+AGG + chr5_4:9239324-9239343 Msa0835820:intron 25.0%
!!! TATTTTTACATAGAGAAGAG+GGG + chr5_4:9239355-9239374 Msa0835820:intron 25.0%
! TATTAATTAGGATGTAGAGA+AGG - chr5_4:9239435-9239454 None:intergenic 25.0%
!! CATCCTTTATTTGCATAAAA+TGG - chr5_4:9239522-9239541 None:intergenic 25.0%
! AGATTTAGTTAAGTGTCAAT+GGG - chr5_4:9239602-9239621 None:intergenic 25.0%
! TAGATTTAGTTAAGTGTCAA+TGG - chr5_4:9239603-9239622 None:intergenic 25.0%
! ATATCACTACAAAGAAATGA+GGG - chr5_4:9239678-9239697 None:intergenic 25.0%
! AATATCACTACAAAGAAATG+AGG - chr5_4:9239679-9239698 None:intergenic 25.0%
!!! TAGTGATATTGATATTTTGG+TGG + chr5_4:9239689-9239708 Msa0835820:intron 25.0%
! TTCATAGAGATCCAAATTTA+TGG + chr5_4:9240026-9240045 Msa0835820:CDS 25.0%
!!! GTTTGAGATTTGTTGAAAAA+AGG + chr5_4:9240344-9240363 Msa0835820:three_prime_UTR 25.0%
TTGTCTTGAGTTTATTAGGA+TGG - chr5_4:9237336-9237355 None:intergenic 30.0%
ACACTTGTCTTGAGTTTATT+AGG - chr5_4:9237340-9237359 None:intergenic 30.0%
CAATTATAGGAAGACATTGT+GGG - chr5_4:9237483-9237502 None:intergenic 30.0%
!! CATATTTTTGTGATAAGGTG+TGG - chr5_4:9237546-9237565 None:intergenic 30.0%
CACACCTTATCACAAAAATA+TGG + chr5_4:9237544-9237563 Msa0835820:CDS 30.0%
!! TTGGCCATATTTTTGTGATA+AGG - chr5_4:9237551-9237570 None:intergenic 30.0%
!!! TGCTAAAACTATGTCGTTTT+TGG - chr5_4:9237647-9237666 None:intergenic 30.0%
! TATTGGCTACAACAATACTA+CGG + chr5_4:9237696-9237715 Msa0835820:CDS 30.0%
TCATCGTTTAAATTCCTTCT+TGG + chr5_4:9237789-9237808 Msa0835820:CDS 30.0%
! TGAACTTAGACCTATGTTTT+CGG + chr5_4:9237885-9237904 Msa0835820:CDS 30.0%
TACTATAATGAGAATGGTGT+CGG + chr5_4:9237921-9237940 Msa0835820:CDS 30.0%
!! TTAAGGTGGTTTGATTTTGA+TGG + chr5_4:9238069-9238088 Msa0835820:CDS 30.0%
! CTTATTGATGAACATCGTTT+TGG + chr5_4:9238147-9238166 Msa0835820:CDS 30.0%
TGTTAAGAGATGATCAATCA+TGG - chr5_4:9238190-9238209 None:intergenic 30.0%
ATCACAACCTGAGTATTATA+CGG + chr5_4:9238218-9238237 Msa0835820:CDS 30.0%
ATTTGATCCGTATAATACTC+AGG - chr5_4:9238228-9238247 None:intergenic 30.0%
TATACGGATCAAATCATCAA+AGG + chr5_4:9238234-9238253 Msa0835820:CDS 30.0%
TCAAATCATCAAAGGACTTA+TGG + chr5_4:9238242-9238261 Msa0835820:CDS 30.0%
GTTACTGAATGGATAAGTTT+CGG + chr5_4:9238503-9238522 Msa0835820:intron 30.0%
AAGATAAGAACAGCATTTAC+AGG + chr5_4:9238563-9238582 Msa0835820:intron 30.0%
GTTACTGAATGGATAAGTTT+CGG + chr5_4:9238503-9238522 Msa0835820:intron 30.0%
TATTTGCATAAAATGGCCAA+TGG - chr5_4:9239515-9239534 None:intergenic 30.0%
!! TGGCCATTTTATGCAAATAA+AGG + chr5_4:9239516-9239535 Msa0835820:intron 30.0%
ATAAAGGATGTGCCAAAATT+AGG + chr5_4:9239532-9239551 Msa0835820:intron 30.0%
!!! ATATTTTGGTGGACTTTTGT+AGG + chr5_4:9239700-9239719 Msa0835820:intron 30.0%
! TTTGTAGGTTATGTTACTTG+CGG + chr5_4:9239715-9239734 Msa0835820:intron 30.0%
TTTGCCATCTTCATTATTTC+TGG - chr5_4:9239797-9239816 None:intergenic 30.0%
!!! TAAGGAAGTTTTGAAATGTC+AGG - chr5_4:9239866-9239885 None:intergenic 30.0%
!! TAGACAATGCTTTGAAGATA+AGG - chr5_4:9239884-9239903 None:intergenic 30.0%
! GACAAATGAGGTACTAATAA+TGG - chr5_4:9239935-9239954 None:intergenic 30.0%
! AAATCTTCTGAAGACAAATG+AGG - chr5_4:9239947-9239966 None:intergenic 30.0%
! TCTTCAGAAGATTTTACCTT+AGG + chr5_4:9239953-9239972 Msa0835820:CDS 30.0%
! CCATCAAAATTGTGTTTTGT+GGG - chr5_4:9239991-9240010 None:intergenic 30.0%
! ACCATCAAAATTGTGTTTTG+TGG - chr5_4:9239992-9240011 None:intergenic 30.0%
!!! AATTTTGATGGTGAATGCTT+GGG + chr5_4:9240000-9240019 Msa0835820:CDS 30.0%
TAAACTACTTTCATTTGGGT+TGG + chr5_4:9240102-9240121 Msa0835820:CDS 30.0%
! AAACTACTTTCATTTGGGTT+GGG + chr5_4:9240103-9240122 Msa0835820:CDS 30.0%
AGGTGAAGAAAAAATTGACA+TGG + chr5_4:9240216-9240235 Msa0835820:CDS 30.0%
!! CACTTTACACATTGCTTTTA+AGG - chr5_4:9240278-9240297 None:intergenic 30.0%
ACTTATGAGTTGTGTAAAAC+AGG + chr5_4:9240406-9240425 Msa0835820:three_prime_UTR 30.0%
TATTAGGATGGAATGTGAAG+TGG - chr5_4:9237324-9237343 None:intergenic 35.0%
AGAGCTTCAAAGTGATGATA+AGG - chr5_4:9237420-9237439 None:intergenic 35.0%
CCAATTATAGGAAGACATTG+TGG - chr5_4:9237484-9237503 None:intergenic 35.0%
CCACAATGTCTTCCTATAAT+TGG + chr5_4:9237481-9237500 Msa0835820:CDS 35.0%
TGGTGAAGGTTTCCAATTAT+AGG - chr5_4:9237496-9237515 None:intergenic 35.0%
CAAATCTTCTCTCTTTGGTT+CGG + chr5_4:9237568-9237587 Msa0835820:CDS 35.0%
GGTAAAACATTCTTGTGTCA+TGG - chr5_4:9237626-9237645 None:intergenic 35.0%
TTCCAGTTAAGAAATGAGGT+CGG - chr5_4:9237672-9237691 None:intergenic 35.0%
ATCTCTTCGTATTTCCAAGA+AGG - chr5_4:9237806-9237825 None:intergenic 35.0%
AATGTCATCTCCGAAAACAT+AGG - chr5_4:9237898-9237917 None:intergenic 35.0%
ACTATAATGAGAATGGTGTC+GGG + chr5_4:9237922-9237941 Msa0835820:CDS 35.0%
! AAAGAGGTTGTTAGTTTAGG+AGG + chr5_4:9238015-9238034 Msa0835820:CDS 35.0%
!!! TAACAACGCTGGTGATTTTT+TGG + chr5_4:9238041-9238060 Msa0835820:CDS 35.0%
!!! AACAACGCTGGTGATTTTTT+GGG + chr5_4:9238042-9238061 Msa0835820:CDS 35.0%
!! GTGGTTTGATTTTGATGGTT+TGG + chr5_4:9238074-9238093 Msa0835820:CDS 35.0%
!!! AGAACCGATGCTTTTTTACA+AGG + chr5_4:9238123-9238142 Msa0835820:CDS 35.0%
!!! GAACCGATGCTTTTTTACAA+GGG + chr5_4:9238124-9238143 Msa0835820:CDS 35.0%
! AAGCCCTTGTAAAAAAGCAT+CGG - chr5_4:9238130-9238149 None:intergenic 35.0%
!!! ATGAACATCGTTTTGGAAAG+AGG + chr5_4:9238154-9238173 Msa0835820:CDS 35.0%
AATCATCAAAGGACTTATGG+TGG + chr5_4:9238245-9238264 Msa0835820:CDS 35.0%
TACTATATAGCTAGGCTTAC+AGG + chr5_4:9238806-9238825 Msa0835820:intron 35.0%
! TTCGGTTTTCCACCTAATTT+TGG - chr5_4:9239547-9239566 None:intergenic 35.0%
!! AAAGCAAGTGTTAATGGGTT+CGG - chr5_4:9239565-9239584 None:intergenic 35.0%
!! ACCCATTAACACTTGCTTTT+TGG + chr5_4:9239566-9239585 Msa0835820:intron 35.0%
CCCAAAAAGCAAGTGTTAAT+GGG - chr5_4:9239570-9239589 None:intergenic 35.0%
!!! CCCATTAACACTTGCTTTTT+GGG + chr5_4:9239567-9239586 Msa0835820:intron 35.0%
ACCCAAAAAGCAAGTGTTAA+TGG - chr5_4:9239571-9239590 None:intergenic 35.0%
! TTGTAGGTTATGTTACTTGC+GGG + chr5_4:9239716-9239735 Msa0835820:intron 35.0%
ATCATCCGTGACATTAGAAT+GGG + chr5_4:9239748-9239767 Msa0835820:CDS 35.0%
TTCTGGATGGTTTAGTAAAC+TGG - chr5_4:9239780-9239799 None:intergenic 35.0%
!! CCATCTTCATTATTTCTGGA+TGG - chr5_4:9239793-9239812 None:intergenic 35.0%
CCATCCAGAAATAATGAAGA+TGG + chr5_4:9239790-9239809 Msa0835820:CDS 35.0%
GAAGATGGCAAAAAATGAGT+TGG + chr5_4:9239805-9239824 Msa0835820:CDS 35.0%
! TCAGAAGATTTTACCTTAGG+AGG + chr5_4:9239956-9239975 Msa0835820:CDS 35.0%
TGGGATATTATATCCTCCTA+AGG - chr5_4:9239972-9239991 None:intergenic 35.0%
! CCCACAAAACACAATTTTGA+TGG + chr5_4:9239988-9240007 Msa0835820:CDS 35.0%
!!! CAATTTTGATGGTGAATGCT+TGG + chr5_4:9239999-9240018 Msa0835820:CDS 35.0%
GTAGGATCACTCCATAAATT+TGG - chr5_4:9240040-9240059 None:intergenic 35.0%
!!! TGTTGATTCAGTGTTTTGAG+TGG + chr5_4:9240185-9240204 Msa0835820:CDS 35.0%
!! TGTTTTGAGTGGAAACGAAT+AGG + chr5_4:9240196-9240215 Msa0835820:CDS 35.0%
ATTGACATGGTTGAAGCAAA+AGG + chr5_4:9240229-9240248 Msa0835820:CDS 35.0%
GCGACATCCATTGAATATTA+AGG + chr5_4:9240297-9240316 Msa0835820:CDS 35.0%
TTGTGTAAAACAGGCTCATA+TGG + chr5_4:9240415-9240434 Msa0835820:three_prime_UTR 35.0%
GCTAGACAACATTCTTCAAA+AGG - chr5_4:9240447-9240466 None:intergenic 35.0%
AAGATCAAAAACCTTCCACC+AGG + chr5_4:9237457-9237476 Msa0835820:CDS 40.0%
ATGGCCAAATCTTCTCTCTT+TGG + chr5_4:9237563-9237582 Msa0835820:CDS 40.0%
CGAACCAAAGAGAGAAGATT+TGG - chr5_4:9237570-9237589 None:intergenic 40.0%
AACCGACCTCATTTCTTAAC+TGG + chr5_4:9237667-9237686 Msa0835820:CDS 40.0%
AATCACCTTATGGTGACCAT+TGG + chr5_4:9237725-9237744 Msa0835820:CDS 40.0%
! CTATAATGAGAATGGTGTCG+GGG + chr5_4:9237923-9237942 Msa0835820:CDS 40.0%
TTGTGATGTGAGTGATGTTG+AGG + chr5_4:9237966-9237985 Msa0835820:CDS 40.0%
CTGAGTAGATAGTTGTACTG+TGG - chr5_4:9238864-9238883 None:intergenic 40.0%
AGGGCTGAGTATATTTCCAT+TGG + chr5_4:9239496-9239515 Msa0835820:intron 40.0%
AAGGATGTGCCAAAATTAGG+TGG + chr5_4:9239535-9239554 Msa0835820:intron 40.0%
!!! CACTTGCTTTTTGGGTACAA+AGG + chr5_4:9239575-9239594 Msa0835820:intron 40.0%
CATCATCCGTGACATTAGAA+TGG + chr5_4:9239747-9239766 Msa0835820:CDS 40.0%
CATAGCCCATTCTAATGTCA+CGG - chr5_4:9239756-9239775 None:intergenic 40.0%
! AATGAGTTGGACACTCACAT+AGG + chr5_4:9239818-9239837 Msa0835820:CDS 40.0%
! CTCTCTGGCTTAAAACATGT+AGG - chr5_4:9240058-9240077 None:intergenic 40.0%
!! CTACATGTTTTAAGCCAGAG+AGG + chr5_4:9240056-9240075 Msa0835820:CDS 40.0%
!! TTTCATTTGGGTTGGGTAGA+AGG + chr5_4:9240110-9240129 Msa0835820:CDS 40.0%
!! TTCATTTGGGTTGGGTAGAA+GGG + chr5_4:9240111-9240130 Msa0835820:CDS 40.0%
GGTTGAAGCAAAAGGAATCA+CGG + chr5_4:9240237-9240256 Msa0835820:CDS 40.0%
!! GTGGTTGTTTGAGTTGGTGA+AGG - chr5_4:9237510-9237529 None:intergenic 45.0%
ATAAGGTGTGGAATGTGTGG+TGG - chr5_4:9237534-9237553 None:intergenic 45.0%
GTGATAAGGTGTGGAATGTG+TGG - chr5_4:9237537-9237556 None:intergenic 45.0%
ACGGTAGCACAATCACCTTA+TGG + chr5_4:9237715-9237734 Msa0835820:CDS 45.0%
GTGTCGGGGAAAAGATACTA+TGG + chr5_4:9237937-9237956 Msa0835820:CDS 45.0%
GATGTAGAGAAGGAGCAGAA+AGG - chr5_4:9239425-9239444 None:intergenic 45.0%
CCTTCTTTCTCAAACCTCTC+TGG - chr5_4:9240073-9240092 None:intergenic 45.0%
CCAGAGAGGTTTGAGAAAGA+AGG + chr5_4:9240070-9240089 Msa0835820:CDS 45.0%
GAGGTTTGAGAAAGAAGGTG+AGG + chr5_4:9240075-9240094 Msa0835820:CDS 45.0%
AGTCAATCCCACAGTCCTTT+GGG - chr5_4:9240158-9240177 None:intergenic 45.0%
AAGTCAATCCCACAGTCCTT+TGG - chr5_4:9240159-9240178 None:intergenic 45.0%
! AAGGACTGTGGGATTGACTT+TGG + chr5_4:9240159-9240178 Msa0835820:CDS 45.0%
! AGGACTGTGGGATTGACTTT+GGG + chr5_4:9240160-9240179 Msa0835820:CDS 45.0%
TGAAGCAAAAGGAATCACGG+TGG + chr5_4:9240240-9240259 Msa0835820:CDS 45.0%
GAAGCAAAAGGAATCACGGT+GGG + chr5_4:9240241-9240260 Msa0835820:CDS 45.0%
ATAGGAAGACATTGTGGGCC+TGG - chr5_4:9237478-9237497 None:intergenic 50.0%
GGTGGAGTGGTTGTTTGAGT+TGG - chr5_4:9237516-9237535 None:intergenic 50.0%
TTGCGCCAATGGTCACCATA+AGG - chr5_4:9237733-9237752 None:intergenic 50.0%
TACGTCGAAGATTGCGCCAA+TGG - chr5_4:9237744-9237763 None:intergenic 50.0%
TTAGGAGGAGCTAACAACGC+TGG + chr5_4:9238030-9238049 Msa0835820:CDS 50.0%
AGCTGCTGCATGTAGTCGAA+GGG - chr5_4:9239912-9239931 None:intergenic 50.0%
CTTTGGGCTAAGCTTTCTCC+AGG - chr5_4:9240142-9240161 None:intergenic 50.0%
CTGGAGAAAGCTTAGCCCAA+AGG + chr5_4:9240140-9240159 Msa0835820:CDS 50.0%
AAGCTTAGCCCAAAGGACTG+TGG + chr5_4:9240147-9240166 Msa0835820:CDS 50.0%
AGCTTAGCCCAAAGGACTGT+GGG + chr5_4:9240148-9240167 Msa0835820:CDS 50.0%
! GTGTGGAATGTGTGGTGGAG+TGG - chr5_4:9237529-9237548 None:intergenic 55.0%
GAGCTGCTGCATGTAGTCGA+AGG - chr5_4:9239913-9239932 None:intergenic 55.0%
TTGGGTAGAAGGGCTTGTCC+TGG + chr5_4:9240121-9240140 Msa0835820:CDS 55.0%
GACATTGTGGGCCTGGTGGA+AGG - chr5_4:9237471-9237490 None:intergenic 60.0%
GGAAGACATTGTGGGCCTGG+TGG - chr5_4:9237475-9237494 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 9237296 9240505 9237296 ID=Msa0835820;Name=Msa0835820
chr5_4 mRNA 9237296 9240505 9237296 ID=Msa0835820-mRNA-1;Parent=Msa0835820;Name=Msa0835820-mRNA-1;_AED=0.01;_eAED=0.01;_QI=83|1|1|1|1|1|2|175|498
chr5_4 exon 9237296 9238266 9237296 ID=Msa0835820-mRNA-1:exon:4032;Parent=Msa0835820-mRNA-1
chr5_4 exon 9239722 9240505 9239722 ID=Msa0835820-mRNA-1:exon:4033;Parent=Msa0835820-mRNA-1
chr5_4 five_prime_UTR 9237296 9237378 9237296 ID=Msa0835820-mRNA-1:five_prime_utr;Parent=Msa0835820-mRNA-1
chr5_4 CDS 9237379 9238266 9237379 ID=Msa0835820-mRNA-1:cds;Parent=Msa0835820-mRNA-1
chr5_4 CDS 9239722 9240330 9239722 ID=Msa0835820-mRNA-1:cds;Parent=Msa0835820-mRNA-1
chr5_4 three_prime_UTR 9240331 9240505 9240331 ID=Msa0835820-mRNA-1:three_prime_utr;Parent=Msa0835820-mRNA-1
Gene Sequence

>Msa0835820

ATGAGTACTTTCTATCTCTCACTCATCTCTCTCTTTTTCCTTATCATCACTTTGAAGCTCTTCTTCAACACATCAAGAAAGATCAAAAACCTTCCACCAGGCCCACAATGTCTTCCTATAATTGGAAACCTTCACCAACTCAAACAACCACTCCACCACACATTCCACACCTTATCACAAAAATATGGCCAAATCTTCTCTCTTTGGTTCGGTTCTCGTCTCGTTGTTGTTGTTTCATCATTAACCATGACACAAGAATGTTTTACCAAAAACGACATAGTTTTAGCAAACCGACCTCATTTCTTAACTGGAAAATATATTGGCTACAACAATACTACGGTAGCACAATCACCTTATGGTGACCATTGGCGCAATCTTCGACGTATATTATCAATTGAAGTACTCTCATCTCATCGTTTAAATTCCTTCTTGGAAATACGAAGAGATGAGATTATGAGACTAATACAAAAGTTAGCACAAAAATCATACAATGGTTTCACTGAAGTTGAACTTAGACCTATGTTTTCGGAGATGACATTTAATACTATAATGAGAATGGTGTCGGGGAAAAGATACTATGGAAATGATTGTGATGTGAGTGATGTTGAGGAAGCAAGATTGTTTAGAGAGATAATTAAAGAGGTTGTTAGTTTAGGAGGAGCTAACAACGCTGGTGATTTTTTGGGTTTTTTAAGGTGGTTTGATTTTGATGGTTTGGAAAAAAGGCTTAAGAAGATTAGTAAGAGAACCGATGCTTTTTTACAAGGGCTTATTGATGAACATCGTTTTGGAAAGAGGAATAGTAACACCATGATTGATCATCTCTTAACACAGCAACAATCACAACCTGAGTATTATACGGATCAAATCATCAAAGGACTTATGGTGGTTATGTTACTTGCGGGAACAGACACATCATCCGTGACATTAGAATGGGCTATGTCCAGTTTACTAAACCATCCAGAAATAATGAAGATGGCAAAAAATGAGTTGGACACTCACATAGGACAAGAACGTTTAGTAGATGAGCCTGACATTTCAAAACTTCCTTATCTTCAAAGCATTGTCTATGAAACCCTTCGACTACATGCAGCAGCTCCATTATTAGTACCTCATTTGTCTTCAGAAGATTTTACCTTAGGAGGATATAATATCCCACAAAACACAATTTTGATGGTGAATGCTTGGGTCATTCATAGAGATCCAAATTTATGGAGTGATCCTACATGTTTTAAGCCAGAGAGGTTTGAGAAAGAAGGTGAGGTAAATAAACTACTTTCATTTGGGTTGGGTAGAAGGGCTTGTCCTGGAGAAAGCTTAGCCCAAAGGACTGTGGGATTGACTTTGGGTTTGTTGATTCAGTGTTTTGAGTGGAAACGAATAGGTGAAGAAAAAATTGACATGGTTGAAGCAAAAGGAATCACGGTGGGAAAAAAGATTTCCTTAAAAGCAATGTGTAAAGTGCGACATCCATTGAATATTAAGGATGTTTTTTAG
Protein sequence

>Msa0835820

MSTFYLSLISLFFLIITLKLFFNTSRKIKNLPPGPQCLPIIGNLHQLKQPLHHTFHTLSQKYGQIFSLWFGSRLVVVVSSLTMTQECFTKNDIVLANRPHFLTGKYIGYNNTTVAQSPYGDHWRNLRRILSIEVLSSHRLNSFLEIRRDEIMRLIQKLAQKSYNGFTEVELRPMFSEMTFNTIMRMVSGKRYYGNDCDVSDVEEARLFREIIKEVVSLGGANNAGDFLGFLRWFDFDGLEKRLKKISKRTDAFLQGLIDEHRFGKRNSNTMIDHLLTQQQSQPEYYTDQIIKGLMVVMLLAGTDTSSVTLEWAMSSLLNHPEIMKMAKNELDTHIGQERLVDEPDISKLPYLQSIVYETLRLHAAAPLLVPHLSSEDFTLGGYNIPQNTILMVNAWVIHRDPNLWSDPTCFKPERFEKEGEVNKLLSFGLGRRACPGESLAQRTVGLTLGLLIQCFEWKRIGEEKIDMVEAKGITVGKKISLKAMCKVRHPLNIKDVF*