Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190120 | XP_003593271.1 | 89.944 | 179 | 11 | 1 | 1 | 172 | 1 | 179 | 1.85e-107 | 316 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190120 | Q2HVA3 | 89.944 | 179 | 11 | 1 | 1 | 172 | 1 | 179 | 8.82e-108 | 316 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0190120 | 0.833183 | 6.171885e-56 | -8.615850e-47 |
| Msa0006550 | Msa0190120 | 0.803605 | 3.218345e-49 | -8.615850e-47 |
| Msa0008840 | Msa0190120 | 0.819324 | 1.233261e-52 | -8.615850e-47 |
| Msa0010490 | Msa0190120 | 0.825046 | 5.802962e-54 | -8.615850e-47 |
| Msa0010500 | Msa0190120 | 0.812707 | 3.702413e-51 | -8.615850e-47 |
| Msa0020390 | Msa0190120 | 0.843869 | 1.074867e-58 | -8.615850e-47 |
| Msa0023000 | Msa0190120 | 0.827890 | 1.218190e-54 | -8.615850e-47 |
| Msa0029260 | Msa0190120 | 0.847528 | 1.092651e-59 | -8.615850e-47 |
| Msa0036370 | Msa0190120 | 0.810327 | 1.217996e-50 | -8.615850e-47 |
| Msa0038870 | Msa0190120 | 0.815294 | 9.950235e-52 | -8.615850e-47 |
| Msa0051860 | Msa0190120 | 0.827286 | 1.701521e-54 | -8.615850e-47 |
| Msa0057750 | Msa0190120 | 0.807460 | 5.001765e-50 | -8.615850e-47 |
| Msa0065950 | Msa0190120 | 0.815202 | 1.042954e-51 | -8.615850e-47 |
| Msa0071250 | Msa0190120 | 0.840860 | 6.741272e-58 | -8.615850e-47 |
| Msa0072170 | Msa0190120 | 0.823432 | 1.389808e-53 | -8.615850e-47 |
| Msa0086420 | Msa0190120 | 0.809600 | 1.746229e-50 | -8.615850e-47 |
| Msa0090550 | Msa0190120 | 0.801073 | 1.069612e-48 | -8.615850e-47 |
| Msa0091610 | Msa0190120 | 0.811730 | 6.048720e-51 | -8.615850e-47 |
| Msa0093010 | Msa0190120 | 0.812385 | 4.354066e-51 | -8.615850e-47 |
| Msa0093420 | Msa0190120 | 0.804047 | 2.605031e-49 | -8.615850e-47 |
| Msa0095360 | Msa0190120 | 0.805812 | 1.114218e-49 | -8.615850e-47 |
| Msa0096980 | Msa0190120 | 0.845428 | 4.087764e-59 | -8.615850e-47 |
| Msa0103070 | Msa0190120 | 0.809191 | 2.137348e-50 | -8.615850e-47 |
| Msa0103790 | Msa0190120 | 0.829856 | 4.072564e-55 | -8.615850e-47 |
| Msa0105520 | Msa0190120 | 0.802269 | 6.077375e-49 | -8.615850e-47 |
| Msa0115190 | Msa0190120 | 0.823281 | 1.507542e-53 | -8.615850e-47 |
| Msa0115370 | Msa0190120 | 0.821050 | 4.961014e-53 | -8.615850e-47 |
| Msa0115390 | Msa0190120 | 0.808628 | 2.820863e-50 | -8.615850e-47 |
| Msa0118540 | Msa0190120 | 0.868161 | 8.017866e-66 | -8.615850e-47 |
| Msa0118780 | Msa0190120 | 0.811584 | 6.507981e-51 | -8.615850e-47 |
| Msa0120540 | Msa0190120 | 0.817786 | 2.753209e-52 | -8.615850e-47 |
| Msa0121820 | Msa0190120 | 0.842620 | 2.314383e-58 | -8.615850e-47 |
| Msa0121870 | Msa0190120 | 0.807726 | 4.390266e-50 | -8.615850e-47 |
| Msa0126880 | Msa0190120 | 0.827929 | 1.192256e-54 | -8.615850e-47 |
| Msa0140110 | Msa0190120 | 0.830041 | 3.670614e-55 | -8.615850e-47 |
| Msa0145010 | Msa0190120 | 0.844542 | 7.088276e-59 | -8.615850e-47 |
| Msa0150260 | Msa0190120 | 0.818297 | 2.109841e-52 | -8.615850e-47 |
| Msa0159420 | Msa0190120 | 0.810539 | 1.096391e-50 | -8.615850e-47 |
| Msa0161820 | Msa0190120 | 0.800719 | 1.263309e-48 | -8.615850e-47 |
| Msa0162130 | Msa0190120 | 0.848627 | 5.432825e-60 | -8.615850e-47 |
| Msa0166750 | Msa0190120 | 0.815986 | 6.979269e-52 | -8.615850e-47 |
| Msa0169300 | Msa0190120 | 0.845419 | 4.108790e-59 | -8.615850e-47 |
| Msa0175200 | Msa0190120 | 0.801259 | 9.797082e-49 | -8.615850e-47 |
| Msa0183850 | Msa0190120 | 0.811768 | 5.935291e-51 | -8.615850e-47 |
| Msa0183870 | Msa0190120 | 0.838694 | 2.470029e-57 | -8.615850e-47 |
| Msa0187490 | Msa0190120 | 0.810124 | 1.347005e-50 | -8.615850e-47 |
| Msa0189520 | Msa0190120 | 0.859827 | 3.158536e-63 | -8.615850e-47 |
| Msa0190120 | Msa0190250 | 0.807890 | 4.052158e-50 | -8.615850e-47 |
| Msa0190120 | Msa0194480 | 0.815493 | 8.986123e-52 | -8.615850e-47 |
| Msa0190120 | Msa0197610 | 0.802066 | 6.690908e-49 | -8.615850e-47 |
| Msa0190120 | Msa0207040 | -0.803899 | 2.796417e-49 | -8.615850e-47 |
| Msa0190120 | Msa0207670 | 0.820269 | 7.498438e-53 | -8.615850e-47 |
| Msa0190120 | Msa0209080 | 0.826476 | 2.657082e-54 | -8.615850e-47 |
| Msa0190120 | Msa0209350 | 0.801658 | 8.115041e-49 | -8.615850e-47 |
| Msa0190120 | Msa0209500 | 0.837727 | 4.383570e-57 | -8.615850e-47 |
| Msa0190120 | Msa0229360 | 0.821034 | 5.004274e-53 | -8.615850e-47 |
| Msa0190120 | Msa0231790 | 0.815328 | 9.779509e-52 | -8.615850e-47 |
| Msa0190120 | Msa0232550 | 0.823946 | 1.053496e-53 | -8.615850e-47 |
| Msa0190120 | Msa0233380 | 0.803435 | 3.491577e-49 | -8.615850e-47 |
| Msa0190120 | Msa0244970 | 0.807527 | 4.838900e-50 | -8.615850e-47 |
| Msa0190120 | Msa0244980 | 0.836376 | 9.701551e-57 | -8.615850e-47 |
| Msa0190120 | Msa0249580 | 0.810064 | 1.387841e-50 | -8.615850e-47 |
| Msa0190120 | Msa0256330 | 0.818304 | 2.102488e-52 | -8.615850e-47 |
| Msa0190120 | Msa0257490 | 0.817502 | 3.189637e-52 | -8.615850e-47 |
| Msa0190120 | Msa0261550 | 0.820429 | 6.892193e-53 | -8.615850e-47 |
| Msa0190120 | Msa0265160 | 0.828871 | 7.063674e-55 | -8.615850e-47 |
| Msa0190120 | Msa0266360 | 0.801785 | 7.641649e-49 | -8.615850e-47 |
| Msa0190120 | Msa0269470 | 0.821417 | 4.083818e-53 | -8.615850e-47 |
| Msa0190120 | Msa0271360 | 0.832881 | 7.340060e-56 | -8.615850e-47 |
| Msa0190120 | Msa0271890 | 0.964605 | 1.541713e-123 | -8.615850e-47 |
| Msa0190120 | Msa0281530 | 0.811022 | 8.616611e-51 | -8.615850e-47 |
| Msa0190120 | Msa0283420 | 0.824375 | 8.351589e-54 | -8.615850e-47 |
| Msa0190120 | Msa0284820 | 0.821611 | 3.683558e-53 | -8.615850e-47 |
| Msa0190120 | Msa0295330 | 0.820542 | 6.493872e-53 | -8.615850e-47 |
| Msa0190120 | Msa0296790 | 0.820623 | 6.219708e-53 | -8.615850e-47 |
| Msa0190120 | Msa0296920 | 0.830986 | 2.155937e-55 | -8.615850e-47 |
| Msa0190120 | Msa0304590 | 0.800901 | 1.159387e-48 | -8.615850e-47 |
| Msa0190120 | Msa0304660 | 0.814429 | 1.547621e-51 | -8.615850e-47 |
| Msa0190120 | Msa0309880 | 0.829019 | 6.506503e-55 | -8.615850e-47 |
| Msa0190120 | Msa0310860 | 0.960433 | 1.495288e-118 | -8.615850e-47 |
| Msa0190120 | Msa0315850 | 0.808576 | 2.893411e-50 | -8.615850e-47 |
| Msa0190120 | Msa0321690 | 0.827339 | 1.652754e-54 | -8.615850e-47 |
| Msa0190120 | Msa0331700 | 0.810105 | 1.359691e-50 | -8.615850e-47 |
| Msa0190120 | Msa0341890 | 0.801188 | 1.012992e-48 | -8.615850e-47 |
| Msa0190120 | Msa0343850 | 0.817129 | 3.870317e-52 | -8.615850e-47 |
| Msa0190120 | Msa0358860 | 0.877067 | 8.457862e-69 | -8.615850e-47 |
| Msa0190120 | Msa0365700 | 0.810714 | 1.004909e-50 | -8.615850e-47 |
| Msa0190120 | Msa0365860 | 0.831633 | 1.494735e-55 | -8.615850e-47 |
| Msa0190120 | Msa0379260 | 0.811118 | 8.214724e-51 | -8.615850e-47 |
| Msa0190120 | Msa0380100 | 0.830754 | 2.457342e-55 | -8.615850e-47 |
| Msa0190120 | Msa0385490 | 0.804700 | 1.904924e-49 | -8.615850e-47 |
| Msa0190120 | Msa0385500 | 0.819671 | 1.027606e-52 | -8.615850e-47 |
| Msa0190120 | Msa0386040 | 0.824691 | 7.036400e-54 | -8.615850e-47 |
| Msa0190120 | Msa0387910 | 0.814255 | 1.690742e-51 | -8.615850e-47 |
| Msa0190120 | Msa0398660 | 0.803039 | 4.217047e-49 | -8.615850e-47 |
| Msa0190120 | Msa0403770 | 0.856947 | 2.278882e-62 | -8.615850e-47 |
| Msa0190120 | Msa0408390 | 0.818605 | 1.796061e-52 | -8.615850e-47 |
| Msa0190120 | Msa0415430 | 0.827669 | 1.377332e-54 | -8.615850e-47 |
| Msa0190120 | Msa0419520 | 0.805188 | 1.505639e-49 | -8.615850e-47 |
| Msa0190120 | Msa0427860 | -0.806256 | 8.983343e-50 | -8.615850e-47 |
| Msa0190120 | Msa0436190 | 0.821838 | 3.262458e-53 | -8.615850e-47 |
| Msa0190120 | Msa0443430 | 0.815631 | 8.375422e-52 | -8.615850e-47 |
| Msa0190120 | Msa0451120 | 0.817581 | 3.062568e-52 | -8.615850e-47 |
| Msa0190120 | Msa0457510 | 0.829583 | 4.746656e-55 | -8.615850e-47 |
| Msa0190120 | Msa0458060 | 0.802248 | 6.140097e-49 | -8.615850e-47 |
| Msa0190120 | Msa0463340 | 0.825003 | 5.941099e-54 | -8.615850e-47 |
| Msa0190120 | Msa0467220 | 0.831223 | 1.885740e-55 | -8.615850e-47 |
| Msa0190120 | Msa0469620 | -0.837031 | 6.605077e-57 | -8.615850e-47 |
| Msa0190120 | Msa0479330 | 0.808886 | 2.484224e-50 | -8.615850e-47 |
| Msa0190120 | Msa0482940 | 0.832803 | 7.672577e-56 | -8.615850e-47 |
| Msa0190120 | Msa0484740 | 0.814851 | 1.248096e-51 | -8.615850e-47 |
| Msa0190120 | Msa0485710 | 0.809080 | 2.257744e-50 | -8.615850e-47 |
| Msa0190120 | Msa0485850 | 0.822035 | 2.937947e-53 | -8.615850e-47 |
| Msa0190120 | Msa0496450 | 0.824868 | 6.391670e-54 | -8.615850e-47 |
| Msa0190120 | Msa0506400 | 0.806782 | 6.959544e-50 | -8.615850e-47 |
| Msa0190120 | Msa0510840 | 0.808427 | 3.114582e-50 | -8.615850e-47 |
| Msa0190120 | Msa0511770 | 0.803298 | 3.727136e-49 | -8.615850e-47 |
| Msa0190120 | Msa0518170 | 0.817687 | 2.897374e-52 | -8.615850e-47 |
| Msa0190120 | Msa0520790 | 0.805176 | 1.514794e-49 | -8.615850e-47 |
| Msa0190120 | Msa0524590 | 0.803862 | 2.846399e-49 | -8.615850e-47 |
| Msa0190120 | Msa0524600 | 0.839505 | 1.522394e-57 | -8.615850e-47 |
| Msa0190120 | Msa0534410 | 0.820043 | 8.448315e-53 | -8.615850e-47 |
| Msa0190120 | Msa0534900 | 0.851442 | 8.850155e-61 | -8.615850e-47 |
| Msa0190120 | Msa0542290 | 0.827397 | 1.600432e-54 | -8.615850e-47 |
| Msa0190120 | Msa0542560 | 0.843424 | 1.413032e-58 | -8.615850e-47 |
| Msa0190120 | Msa0544840 | 0.837502 | 5.004197e-57 | -8.615850e-47 |
| Msa0190120 | Msa0547160 | 0.833579 | 4.917580e-56 | -8.615850e-47 |
| Msa0190120 | Msa0549780 | 0.825068 | 5.735009e-54 | -8.615850e-47 |
| Msa0190120 | Msa0555640 | 0.804662 | 1.939597e-49 | -8.615850e-47 |
| Msa0190120 | Msa0557480 | 0.805125 | 1.552727e-49 | -8.615850e-47 |
| Msa0190120 | Msa0574060 | -0.813379 | 2.637533e-51 | -8.615850e-47 |
| Msa0190120 | Msa0579370 | 0.807758 | 4.322318e-50 | -8.615850e-47 |
| Msa0190120 | Msa0581110 | 0.809932 | 1.482079e-50 | -8.615850e-47 |
| Msa0190120 | Msa0581130 | 0.801116 | 1.048160e-48 | -8.615850e-47 |
| Msa0190120 | Msa0588240 | 0.817351 | 3.450203e-52 | -8.615850e-47 |
| Msa0190120 | Msa0588260 | 0.828792 | 7.382980e-55 | -8.615850e-47 |
| Msa0190120 | Msa0590650 | 0.829943 | 3.879008e-55 | -8.615850e-47 |
| Msa0190120 | Msa0600080 | 0.806077 | 9.799679e-50 | -8.615850e-47 |
| Msa0190120 | Msa0600450 | 0.833726 | 4.517990e-56 | -8.615850e-47 |
| Msa0190120 | Msa0602370 | 0.833058 | 6.632840e-56 | -8.615850e-47 |
| Msa0190120 | Msa0603570 | 0.839744 | 1.319154e-57 | -8.615850e-47 |
| Msa0190120 | Msa0604290 | 0.828563 | 8.387759e-55 | -8.615850e-47 |
| Msa0190120 | Msa0607690 | 0.800123 | 1.670528e-48 | -8.615850e-47 |
| Msa0190120 | Msa0609220 | 0.843505 | 1.344694e-58 | -8.615850e-47 |
| Msa0190120 | Msa0612720 | 0.817681 | 2.906865e-52 | -8.615850e-47 |
| Msa0190120 | Msa0614990 | 0.806810 | 6.864634e-50 | -8.615850e-47 |
| Msa0190120 | Msa0615680 | 0.818995 | 1.465413e-52 | -8.615850e-47 |
| Msa0190120 | Msa0618930 | 0.801560 | 8.501867e-49 | -8.615850e-47 |
| Msa0190120 | Msa0626940 | 0.811040 | 8.541147e-51 | -8.615850e-47 |
| Msa0190120 | Msa0630950 | 0.801868 | 7.348584e-49 | -8.615850e-47 |
| Msa0190120 | Msa0631350 | 0.846633 | 1.921178e-59 | -8.615850e-47 |
| Msa0190120 | Msa0640940 | 0.829432 | 5.165616e-55 | -8.615850e-47 |
| Msa0190120 | Msa0642970 | 0.826869 | 2.141062e-54 | -8.615850e-47 |
| Msa0190120 | Msa0643320 | 0.850744 | 1.392721e-60 | -8.615850e-47 |
| Msa0190120 | Msa0654620 | 0.801240 | 9.884691e-49 | -8.615850e-47 |
| Msa0190120 | Msa0662630 | 0.829058 | 6.366644e-55 | -8.615850e-47 |
| Msa0190120 | Msa0669720 | 0.859602 | 3.692262e-63 | -8.615850e-47 |
| Msa0190120 | Msa0669760 | 0.843143 | 1.679480e-58 | -8.615850e-47 |
| Msa0190120 | Msa0679360 | 0.832361 | 9.875944e-56 | -8.615850e-47 |
| Msa0190120 | Msa0682680 | 0.844361 | 7.927361e-59 | -8.615850e-47 |
| Msa0190120 | Msa0683140 | 0.847162 | 1.376434e-59 | -8.615850e-47 |
| Msa0190120 | Msa0683600 | 0.849364 | 3.391017e-60 | -8.615850e-47 |
| Msa0190120 | Msa0689320 | 0.810899 | 9.163624e-51 | -8.615850e-47 |
| Msa0190120 | Msa0698540 | 0.801867 | 7.351529e-49 | -8.615850e-47 |
| Msa0190120 | Msa0701100 | 0.800132 | 1.663448e-48 | -8.615850e-47 |
| Msa0190120 | Msa0705820 | 0.812229 | 4.709671e-51 | -8.615850e-47 |
| Msa0190120 | Msa0705990 | 0.818212 | 2.205358e-52 | -8.615850e-47 |
| Msa0190120 | Msa0709160 | 0.809807 | 1.576790e-50 | -8.615850e-47 |
| Msa0190120 | Msa0713340 | 0.839889 | 1.209588e-57 | -8.615850e-47 |
| Msa0190120 | Msa0746170 | 0.803895 | 2.802156e-49 | -8.615850e-47 |
| Msa0190120 | Msa0746210 | 0.804391 | 2.209201e-49 | -8.615850e-47 |
| Msa0190120 | Msa0748170 | 0.828211 | 1.020044e-54 | -8.615850e-47 |
| Msa0190120 | Msa0751010 | 0.826747 | 2.289861e-54 | -8.615850e-47 |
| Msa0190120 | Msa0754930 | 0.844839 | 5.894646e-59 | -8.615850e-47 |
| Msa0190120 | Msa0756550 | 0.816976 | 4.188815e-52 | -8.615850e-47 |
| Msa0190120 | Msa0764920 | 0.809887 | 1.514812e-50 | -8.615850e-47 |
| Msa0190120 | Msa0765180 | 0.807416 | 5.108110e-50 | -8.615850e-47 |
| Msa0190120 | Msa0769980 | 0.802271 | 6.072675e-49 | -8.615850e-47 |
| Msa0190120 | Msa0793380 | 0.816451 | 5.494416e-52 | -8.615850e-47 |
| Msa0190120 | Msa0794050 | 0.821773 | 3.378310e-53 | -8.615850e-47 |
| Msa0190120 | Msa0799340 | 0.844207 | 8.720504e-59 | -8.615850e-47 |
| Msa0190120 | Msa0800370 | 0.859388 | 4.281798e-63 | -8.615850e-47 |
| Msa0190120 | Msa0801730 | 0.811133 | 8.153539e-51 | -8.615850e-47 |
| Msa0190120 | Msa0811430 | 0.804102 | 2.537636e-49 | -8.615850e-47 |
| Msa0190120 | Msa0826150 | 0.831918 | 1.271181e-55 | -8.615850e-47 |
| Msa0190120 | Msa0826500 | 0.806860 | 6.699494e-50 | -8.615850e-47 |
| Msa0190120 | Msa0833190 | -0.836822 | 7.468924e-57 | -8.615850e-47 |
| Msa0190120 | Msa0834330 | 0.844212 | 8.695334e-59 | -8.615850e-47 |
| Msa0190120 | Msa0835280 | 0.801580 | 8.419869e-49 | -8.615850e-47 |
| Msa0190120 | Msa0835820 | 0.817025 | 4.084522e-52 | -8.615850e-47 |
| Msa0190120 | Msa0844110 | 0.804871 | 1.754297e-49 | -8.615850e-47 |
| Msa0190120 | Msa0844610 | 0.810148 | 1.331352e-50 | -8.615850e-47 |
| Msa0190120 | Msa0851620 | 0.806791 | 6.930100e-50 | -8.615850e-47 |
| Msa0190120 | Msa0861470 | 0.828362 | 9.375405e-55 | -8.615850e-47 |
| Msa0190120 | Msa0861570 | 0.837160 | 6.124076e-57 | -8.615850e-47 |
| Msa0190120 | Msa0867520 | -0.802842 | 4.630305e-49 | -8.615850e-47 |
| Msa0190120 | Msa0879850 | 0.807638 | 4.583718e-50 | -8.615850e-47 |
| Msa0190120 | Msa0879860 | 0.838704 | 2.455265e-57 | -8.615850e-47 |
| Msa0190120 | Msa0881270 | 0.810998 | 8.720081e-51 | -8.615850e-47 |
| Msa0190120 | Msa0882730 | 0.816506 | 5.339657e-52 | -8.615850e-47 |
| Msa0190120 | Msa0887250 | 0.830329 | 3.122531e-55 | -8.615850e-47 |
| Msa0190120 | Msa0923780 | 0.811066 | 8.432194e-51 | -8.615850e-47 |
| Msa0190120 | Msa0928010 | 0.821552 | 3.800850e-53 | -8.615850e-47 |
| Msa0190120 | Msa0932570 | 0.828939 | 6.800874e-55 | -8.615850e-47 |
| Msa0190120 | Msa0933380 | 0.846826 | 1.701263e-59 | -8.615850e-47 |
| Msa0190120 | Msa0944200 | 0.821952 | 3.071151e-53 | -8.615850e-47 |
| Msa0190120 | Msa0944610 | 0.832631 | 8.465363e-56 | -8.615850e-47 |
| Msa0190120 | Msa0947800 | 0.857205 | 1.912298e-62 | -8.615850e-47 |
| Msa0190120 | Msa0963090 | -0.820243 | 7.603823e-53 | -8.615850e-47 |
| Msa0190120 | Msa0970530 | 0.817973 | 2.497242e-52 | -8.615850e-47 |
| Msa0190120 | Msa0970600 | 0.832064 | 1.169809e-55 | -8.615850e-47 |
| Msa0190120 | Msa0971160 | 0.835055 | 2.096154e-56 | -8.615850e-47 |
| Msa0190120 | Msa0974950 | 0.843892 | 1.059704e-58 | -8.615850e-47 |
| Msa0190120 | Msa0980020 | 0.814100 | 1.829282e-51 | -8.615850e-47 |
| Msa0190120 | Msa0992580 | 0.809628 | 1.722456e-50 | -8.615850e-47 |
| Msa0190120 | Msa0992600 | 0.801130 | 1.040829e-48 | -8.615850e-47 |
| Msa0190120 | Msa0993240 | 0.830614 | 2.659631e-55 | -8.615850e-47 |
| Msa0190120 | Msa0994370 | 0.850499 | 1.632551e-60 | -8.615850e-47 |
| Msa0190120 | Msa0999050 | -0.813980 | 1.944900e-51 | -8.615850e-47 |
| Msa0190120 | Msa1002600 | -0.800871 | 1.175985e-48 | -8.615850e-47 |
| Msa0190120 | Msa1027250 | 0.808738 | 2.672820e-50 | -8.615850e-47 |
| Msa0190120 | Msa1027300 | 0.813348 | 2.678176e-51 | -8.615850e-47 |
| Msa0190120 | Msa1029080 | -0.808424 | 3.118439e-50 | -8.615850e-47 |
| Msa0190120 | Msa1042660 | 0.802154 | 6.417313e-49 | -8.615850e-47 |
| Msa0190120 | Msa1054150 | -0.812435 | 4.245116e-51 | -8.615850e-47 |
| Msa0190120 | Msa1063420 | 0.800057 | 1.722572e-48 | -8.615850e-47 |
| Msa0190120 | Msa1071320 | 0.840560 | 8.077563e-58 | -8.615850e-47 |
| Msa0190120 | Msa1072900 | 0.812758 | 3.608912e-51 | -8.615850e-47 |
| Msa0190120 | Msa1081790 | -0.810501 | 1.117189e-50 | -8.615850e-47 |
| Msa0190120 | Msa1081930 | 0.803531 | 3.334599e-49 | -8.615850e-47 |
| Msa0190120 | Msa1084500 | -0.806615 | 7.546509e-50 | -8.615850e-47 |
| Msa0190120 | Msa1088290 | 0.836500 | 9.024673e-57 | -8.615850e-47 |
| Msa0190120 | Msa1093100 | 0.823719 | 1.190596e-53 | -8.615850e-47 |
| Msa0190120 | Msa1094430 | 0.828986 | 6.627773e-55 | -8.615850e-47 |
| Msa0190120 | Msa1107160 | 0.822105 | 2.829975e-53 | -8.615850e-47 |
| Msa0190120 | Msa1113230 | -0.817919 | 2.568596e-52 | -8.615850e-47 |
| Msa0190120 | Msa1120810 | 0.808171 | 3.531061e-50 | -8.615850e-47 |
| Msa0190120 | Msa1125790 | -0.827890 | 1.218320e-54 | -8.615850e-47 |
| Msa0190120 | Msa1126830 | 0.812036 | 5.188195e-51 | -8.615850e-47 |
| Msa0190120 | Msa1128990 | 0.824404 | 8.223244e-54 | -8.615850e-47 |
| Msa0190120 | Msa1133230 | 0.817772 | 2.773102e-52 | -8.615850e-47 |
| Msa0190120 | Msa1133250 | 0.822337 | 2.499959e-53 | -8.615850e-47 |
| Msa0190120 | Msa1140150 | 0.821509 | 3.887011e-53 | -8.615850e-47 |
| Msa0190120 | Msa1140230 | 0.801289 | 9.658277e-49 | -8.615850e-47 |
| Msa0190120 | Msa1150710 | 0.803282 | 3.755901e-49 | -8.615850e-47 |
| Msa0190120 | Msa1155230 | 0.804629 | 1.970599e-49 | -8.615850e-47 |
| Msa0190120 | Msa1156170 | -0.802585 | 5.231596e-49 | -8.615850e-47 |
| Msa0190120 | Msa1165780 | 0.843107 | 1.717127e-58 | -8.615850e-47 |
| Msa0190120 | Msa1165960 | 0.805086 | 1.581774e-49 | -8.615850e-47 |
| Msa0190120 | Msa1166090 | -0.820250 | 7.573564e-53 | -8.615850e-47 |
| Msa0190120 | Msa1178580 | 0.804369 | 2.233362e-49 | -8.615850e-47 |
| Msa0190120 | Msa1188560 | 0.812272 | 4.609406e-51 | -8.615850e-47 |
| Msa0190120 | Msa1200320 | 0.846636 | 1.917904e-59 | -8.615850e-47 |
| Msa0190120 | Msa1205480 | 0.819114 | 1.376319e-52 | -8.615850e-47 |
| Msa0190120 | Msa1205590 | 0.826229 | 3.042248e-54 | -8.615850e-47 |
| Msa0190120 | Msa1206650 | 0.800853 | 1.185776e-48 | -8.615850e-47 |
| Msa0190120 | Msa1208380 | 0.808879 | 2.493488e-50 | -8.615850e-47 |
| Msa0190120 | Msa1209670 | 0.800643 | 1.308955e-48 | -8.615850e-47 |
| Msa0190120 | Msa1226610 | 0.811890 | 5.583877e-51 | -8.615850e-47 |
| Msa0190120 | Msa1233850 | 0.830530 | 2.788431e-55 | -8.615850e-47 |
| Msa0190120 | Msa1242920 | -0.806690 | 7.278749e-50 | -8.615850e-47 |
| Msa0190120 | Msa1253800 | 0.816735 | 4.744022e-52 | -8.615850e-47 |
| Msa0190120 | Msa1254730 | 0.809761 | 1.613124e-50 | -8.615850e-47 |
| Msa0190120 | Msa1261680 | -0.808171 | 3.531061e-50 | -8.615850e-47 |
| Msa0190120 | Msa1270660 | 0.819835 | 9.426371e-53 | -8.615850e-47 |
| Msa0190120 | Msa1270730 | 0.800972 | 1.121273e-48 | -8.615850e-47 |
| Msa0190120 | Msa1276150 | 0.802794 | 4.736883e-49 | -8.615850e-47 |
| Msa0190120 | Msa1276970 | 0.800055 | 1.724570e-48 | -8.615850e-47 |
| Msa0190120 | Msa1296830 | 0.853440 | 2.387195e-61 | -8.615850e-47 |
| Msa0190120 | Msa1303580 | 0.848558 | 5.678282e-60 | -8.615850e-47 |
| Msa0190120 | Msa1307180 | 0.807200 | 5.677726e-50 | -8.615850e-47 |
| Msa0190120 | Msa1316360 | 0.817676 | 2.914481e-52 | -8.615850e-47 |
| Msa0190120 | Msa1332590 | 0.800688 | 1.281373e-48 | -8.615850e-47 |
| Msa0190120 | Msa1335560 | 0.805439 | 1.334181e-49 | -8.615850e-47 |
| Msa0190120 | Msa1336560 | 0.857486 | 1.579542e-62 | -8.615850e-47 |
| Msa0190120 | Msa1337170 | 0.835098 | 2.045213e-56 | -8.615850e-47 |
| Msa0190120 | Msa1343290 | 0.814473 | 1.513268e-51 | -8.615850e-47 |
| Msa0190120 | Msa1344660 | 0.804452 | 2.146029e-49 | -8.615850e-47 |
| Msa0190120 | Msa1348850 | 0.812495 | 4.118740e-51 | -8.615850e-47 |
| Msa0190120 | Msa1351540 | 0.850894 | 1.263550e-60 | -8.615850e-47 |
| Msa0190120 | Msa1352890 | 0.816196 | 6.263670e-52 | -8.615850e-47 |
| Msa0190120 | Msa1360140 | 0.811255 | 7.671495e-51 | -8.615850e-47 |
| Msa0190120 | Msa1362420 | 0.815707 | 8.051744e-52 | -8.615850e-47 |
| Msa0190120 | Msa1363700 | 0.800488 | 1.407685e-48 | -8.615850e-47 |
| Msa0190120 | Msa1366650 | 0.808165 | 3.541985e-50 | -8.615850e-47 |
| Msa0190120 | Msa1370590 | 0.832104 | 1.143280e-55 | -8.615850e-47 |
| Msa0190120 | Msa1371090 | 0.806764 | 7.020379e-50 | -8.615850e-47 |
| Msa0190120 | Msa1381650 | 0.830041 | 3.670614e-55 | -8.615850e-47 |
| Msa0190120 | Msa1384100 | 0.831868 | 1.308112e-55 | -8.615850e-47 |
| Msa0190120 | Msa1396400 | -0.816996 | 4.146070e-52 | -8.615850e-47 |
| Msa0190120 | Msa1403340 | 0.800175 | 1.630616e-48 | -8.615850e-47 |
| Msa0190120 | Msa1407970 | 0.816813 | 4.556504e-52 | -8.615850e-47 |
| Msa0190120 | Msa1419000 | 0.812898 | 3.363255e-51 | -8.615850e-47 |
| Msa0190120 | Msa1420990 | 0.806222 | 9.132729e-50 | -8.615850e-47 |
| Msa0190120 | Msa1422810 | 0.851684 | 7.560638e-61 | -8.615850e-47 |
| Msa0190120 | Msa1428880 | 0.802313 | 5.952388e-49 | -8.615850e-47 |
| Msa0190120 | Msa1431560 | -0.804666 | 1.936314e-49 | -8.615850e-47 |
| Msa0190120 | Msa1436520 | 0.837111 | 6.303756e-57 | -8.615850e-47 |
| Msa0190120 | Msa1438840 | 0.821598 | 3.708329e-53 | -8.615850e-47 |
| Msa0190120 | Msa1444120 | 0.824632 | 7.266024e-54 | -8.615850e-47 |
| Msa0190120 | Msa1447890 | 0.817362 | 3.429456e-52 | -8.615850e-47 |
| Msa0190120 | Msa1451150 | 0.809983 | 1.444623e-50 | -8.615850e-47 |
| Msa0190120 | Msa1454450 | 0.821496 | 3.913898e-53 | -8.615850e-47 |
| Msa0190120 | Msa1454680 | 0.812949 | 3.276759e-51 | -8.615850e-47 |
| Msa0190120 | Msa1454960 | 0.800915 | 1.151993e-48 | -8.615850e-47 |
| Msa0190120 | Msa1458090 | 0.813784 | 2.147726e-51 | -8.615850e-47 |
| Msa0190120 | Msa1458810 | 0.822025 | 2.953784e-53 | -8.615850e-47 |
| Msa0190120 | Msa1459960 | 0.820963 | 5.196563e-53 | -8.615850e-47 |
| Msa0190120 | Msa1460320 | -0.834104 | 3.634172e-56 | -8.615850e-47 |
| Msa0190120 | Msa1465960 | 0.816208 | 6.224197e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190120 | MtrunA17_Chr2g0279631 | 89.944 | 179 | 11 | 1 | 1 | 172 | 1 | 179 | 1.70e-111 | 316 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0190120 | AT4G33625.1 | 67.598 | 179 | 56 | 1 | 4 | 180 | 5 | 183 | 6.90e-88 | 256 |
| Msa0190120 | AT4G33625.2 | 66.854 | 178 | 57 | 1 | 4 | 179 | 5 | 182 | 2.05e-85 | 250 |
| Msa0190120 | AT4G33625.3 | 67.586 | 145 | 45 | 1 | 4 | 146 | 5 | 149 | 4.27e-68 | 206 |
Find 65 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATATCTAAAGGCAATAT+TGG | 0.238667 | 2_1:-5568149 | Msa0190120:three_prime_UTR |
| CATATGAAATGACTGGTAAA+TGG | 0.254498 | 2_1:+5568113 | None:intergenic |
| GTAACCAACACTAACATAAA+AGG | 0.301548 | 2_1:+5568220 | None:intergenic |
| AAATATCTAAAGGCAATATT+GGG | 0.308722 | 2_1:-5568148 | Msa0190120:three_prime_UTR |
| CTCTAGTGATCTCTTGCTTC+TGG | 0.322823 | 2_1:+5568956 | None:intergenic |
| GTAAAAGAAGGCCTTTGTTT+TGG | 0.339976 | 2_1:+5568042 | None:intergenic |
| CTCTTGTGAACAAAATTAGA+AGG | 0.372460 | 2_1:-5567888 | Msa0190120:three_prime_UTR |
| TTCTCGAGTATTGGGCAGGC+AGG | 0.377149 | 2_1:-5570261 | Msa0190120:CDS |
| AGAGCTTTCCCTGGCTATAG+TGG | 0.408839 | 2_1:-5569627 | Msa0190120:CDS |
| TAGAGAATGAACAAACGATA+TGG | 0.408890 | 2_1:+5568198 | None:intergenic |
| ATATGAAATGACTGGTAAAT+GGG | 0.409647 | 2_1:+5568114 | None:intergenic |
| TGGCGTAGTTTACGTTATCT+TGG | 0.420109 | 2_1:-5569547 | Msa0190120:intron |
| ACTCGACTCGTAGGTAGAAC+TGG | 0.465302 | 2_1:+5570678 | None:intergenic |
| TTCTCTTCATCTTCCTCTCT+AGG | 0.465361 | 2_1:+5570711 | None:intergenic |
| TGCTATTTGCTTCTTTCTTG+TGG | 0.467457 | 2_1:-5569567 | Msa0190120:CDS |
| CTAACATAAAAGGCATTCAT+AGG | 0.469430 | 2_1:+5568230 | None:intergenic |
| GCAACTGCTTGTGACAGAAT+AGG | 0.469735 | 2_1:-5568330 | Msa0190120:exon |
| GCTGAAATTGTCTAATTACT+TGG | 0.480632 | 2_1:-5568286 | Msa0190120:three_prime_UTR |
| TTTCGCTCCCCACTATAGCC+AGG | 0.487874 | 2_1:+5569618 | None:intergenic |
| AACAGCAGAGAGAACGTTAA+CGG | 0.491540 | 2_1:+5570575 | None:intergenic |
| TGGTTCTCGTTGAGACTGAA+TGG | 0.505524 | 2_1:-5570385 | Msa0190120:CDS |
| CTCGAGTATTGGGCAGGCAG+GGG | 0.509030 | 2_1:-5570259 | Msa0190120:CDS |
| ATCTTTCTTAGTTAGGGAGG+AGG | 0.509663 | 2_1:+5570846 | None:intergenic |
| TATTCTGTGTAAATATCTAA+AGG | 0.515463 | 2_1:-5568158 | Msa0190120:three_prime_UTR |
| TCTCGAGTATTGGGCAGGCA+GGG | 0.517138 | 2_1:-5570260 | Msa0190120:CDS |
| TTGTTCACAAGAGAGGTATG+AGG | 0.531108 | 2_1:+5567898 | None:intergenic |
| TTGAAGGGAGTCCTTTGCGT+TGG | 0.532783 | 2_1:-5568997 | Msa0190120:intron |
| CTGTTGAAGTTGATCGAGGA+TGG | 0.532789 | 2_1:-5567943 | Msa0190120:three_prime_UTR |
| ATAAAAGGCATTCATAGGCC+AGG | 0.534215 | 2_1:+5568235 | None:intergenic |
| GTTGAAGTTGATCGAGGATG+GGG | 0.534278 | 2_1:-5567941 | Msa0190120:three_prime_UTR |
| GAGCTTTCCCTGGCTATAGT+GGG | 0.535147 | 2_1:-5569626 | Msa0190120:CDS |
| ACACATCACCTCAAGATCCT+TGG | 0.539361 | 2_1:+5568924 | None:intergenic |
| TGAAACATCTACAAACTATG+AGG | 0.542229 | 2_1:+5570634 | None:intergenic |
| CAGGTTCTCGAGTATTGGGC+AGG | 0.543908 | 2_1:-5570265 | Msa0190120:CDS |
| TGTTGAAGTTGATCGAGGAT+GGG | 0.548109 | 2_1:-5567942 | Msa0190120:three_prime_UTR |
| TCTTTCTTAGTTAGGGAGGA+GGG | 0.548208 | 2_1:+5570847 | None:intergenic |
| ATTGTCTAATTACTTGGTGA+AGG | 0.551948 | 2_1:-5568280 | Msa0190120:three_prime_UTR |
| TCTATCTTTCTTAGTTAGGG+AGG | 0.559313 | 2_1:+5570843 | None:intergenic |
| CACTAGAGAGCAAGCAACCA+AGG | 0.560997 | 2_1:-5568941 | Msa0190120:CDS |
| CTTCGTTCAACTCGACTCGT+AGG | 0.565568 | 2_1:+5570669 | None:intergenic |
| ACTATAGCCAGGGAAAGCTC+TGG | 0.578804 | 2_1:+5569629 | None:intergenic |
| TTCGCTCCCCACTATAGCCA+GGG | 0.578838 | 2_1:+5569619 | None:intergenic |
| GTGATGACCAGAGCTTTCCC+TGG | 0.579648 | 2_1:-5569636 | Msa0190120:CDS |
| ACAAGAGAGGTATGAGGACG+AGG | 0.583020 | 2_1:+5567904 | None:intergenic |
| CATCTACAAACTATGAGGAA+AGG | 0.595696 | 2_1:+5570639 | None:intergenic |
| AAGGCTGAAGAGACGACTAA+AGG | 0.596101 | 2_1:-5568261 | Msa0190120:three_prime_UTR |
| TGGGAGGCATATGAAATGAC+TGG | 0.598990 | 2_1:+5568106 | None:intergenic |
| GCAAGCAACCAAGGATCTTG+AGG | 0.600033 | 2_1:-5568932 | Msa0190120:intron |
| TTGTAGAGGCTCAAAACAGT+GGG | 0.610510 | 2_1:+5568087 | None:intergenic |
| GCAGAGAATAGCAGCTAAAG+CGG | 0.612889 | 2_1:+5570602 | None:intergenic |
| AGGTTATTGACTTATTGTAG+AGG | 0.614079 | 2_1:+5568073 | None:intergenic |
| AGCTTTCCCTGGCTATAGTG+GGG | 0.618131 | 2_1:-5569625 | Msa0190120:CDS |
| AGAGACGACTAAAGGAAACC+TGG | 0.622315 | 2_1:-5568253 | Msa0190120:three_prime_UTR |
| CCTCTCCACACCCAAAACAA+AGG | 0.631992 | 2_1:-5568053 | Msa0190120:three_prime_UTR |
| AGAGAGGAAGATGAAGAGAA+CGG | 0.638221 | 2_1:-5570708 | Msa0190120:CDS |
| AATATCTAAAGGCAATATTG+GGG | 0.638952 | 2_1:-5568147 | Msa0190120:three_prime_UTR |
| AGACGTGAAGATGCCTAGAG+AGG | 0.640729 | 2_1:-5570724 | Msa0190120:exon |
| ATTGTAGAGGCTCAAAACAG+TGG | 0.644746 | 2_1:+5568086 | None:intergenic |
| TAGAGGCTCAAAACAGTGGG+AGG | 0.648160 | 2_1:+5568090 | None:intergenic |
| CTTCAACAGTTCAACGACGT+GGG | 0.652621 | 2_1:+5567957 | None:intergenic |
| ATGAAATGACTGGTAAATGG+GGG | 0.663470 | 2_1:+5568116 | None:intergenic |
| ACTTCAACAGTTCAACGACG+TGG | 0.681043 | 2_1:+5567956 | None:intergenic |
| TATGAAATGACTGGTAAATG+GGG | 0.684338 | 2_1:+5568115 | None:intergenic |
| TGAACTGTTGAAGTTGATCG+AGG | 0.699251 | 2_1:-5567947 | Msa0190120:three_prime_UTR |
| GAGGAAGATGAAGAGAACGG+TGG | 0.701747 | 2_1:-5570705 | Msa0190120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATACTTTAGAAATTAAAT+TGG | - | chr2_1:5568739-5568758 | Msa0190120:intron | 10.0% |
| !!! | AAATCTAAAACAAAAAACAA+TGG | + | chr2_1:5568275-5568294 | None:intergenic | 15.0% |
| !!! | TTCATAATCATGTTTTTTAA+TGG | - | chr2_1:5568550-5568569 | Msa0190120:intron | 15.0% |
| !! | TAGGAGATTAAATTAAATTA+AGG | - | chr2_1:5568775-5568794 | Msa0190120:intron | 15.0% |
| !! | AGGAGATTAAATTAAATTAA+GGG | - | chr2_1:5568776-5568795 | Msa0190120:intron | 15.0% |
| !! | CTATCATATAGTATTATTTA+AGG | + | chr2_1:5568896-5568915 | None:intergenic | 15.0% |
| !!! | TATTGATTTTTCACATTATT+GGG | - | chr2_1:5569383-5569402 | Msa0190120:intron | 15.0% |
| !! | ATTATTAGTTAAAGAAATGA+AGG | - | chr2_1:5570067-5570086 | Msa0190120:intron | 15.0% |
| !!! | ATTTTTTATGATGTAAAAGA+AGG | + | chr2_1:5570698-5570717 | None:intergenic | 15.0% |
| !!! | TTTTCTATCTTTCTTAGTTA+GGG | + | chr2_1:5567888-5567907 | None:intergenic | 20.0% |
| !!! | ATTTTCTATCTTTCTTAGTT+AGG | + | chr2_1:5567889-5567908 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTTAGATTTTCGA+TGG | - | chr2_1:5568279-5568298 | Msa0190120:three_prime_UTR | 20.0% |
| !!! | ATTAATTTTCTTGCATTTTC+AGG | - | chr2_1:5568441-5568460 | Msa0190120:intron | 20.0% |
| !!! | TTTCTAGTATTATCAAACAA+GGG | + | chr2_1:5569272-5569291 | None:intergenic | 20.0% |
| !!! | TCATATTTTGACTAACATTT+TGG | + | chr2_1:5569295-5569314 | None:intergenic | 20.0% |
| !!! | ATACAAACATCAAATTGTTT+TGG | + | chr2_1:5569332-5569351 | None:intergenic | 20.0% |
| !!! | CTATTGATTTTTCACATTAT+TGG | - | chr2_1:5569382-5569401 | Msa0190120:intron | 20.0% |
| !!! | ATTTCTAAAGTATTAAACTC+AGG | + | chr2_1:5569422-5569441 | None:intergenic | 20.0% |
| !!! | AAATGGTTTCATTTAAGTTT+GGG | + | chr2_1:5569445-5569464 | None:intergenic | 20.0% |
| !!! | ATTCTTTAGAACATAAATTG+AGG | + | chr2_1:5569653-5569672 | None:intergenic | 20.0% |
| !! | CAACAAATTAACTAAATTTG+CGG | + | chr2_1:5569926-5569945 | None:intergenic | 20.0% |
| !! | CAACAAATTAATATCAGTAA+CGG | + | chr2_1:5569957-5569976 | None:intergenic | 20.0% |
| !! | GAAATTGCAACAATAAAATT+TGG | + | chr2_1:5570022-5570041 | None:intergenic | 20.0% |
| !! | TATTCTGTGTAAATATCTAA+AGG | - | chr2_1:5570567-5570586 | Msa0190120:CDS | 20.0% |
| !! | TAAATATCTAAAGGCAATAT+TGG | - | chr2_1:5570576-5570595 | Msa0190120:CDS | 20.0% |
| !! | AAATATCTAAAGGCAATATT+GGG | - | chr2_1:5570577-5570596 | Msa0190120:CDS | 20.0% |
| !!! | TACAGTATTTGTGTTTTTGA+AGG | + | chr2_1:5568180-5568199 | None:intergenic | 25.0% |
| ! | CAATTTATTCCTTCATTCAT+CGG | - | chr2_1:5568234-5568253 | Msa0190120:three_prime_UTR | 25.0% |
| !!! | CTTCATAATTAAGTTTTGTC+AGG | - | chr2_1:5568365-5568384 | Msa0190120:intron | 25.0% |
| ! | TTTCCTTCATTTCATTTCTT+AGG | - | chr2_1:5568396-5568415 | Msa0190120:intron | 25.0% |
| ! | TTGTTACATGTAATTGTGTT+TGG | - | chr2_1:5568525-5568544 | Msa0190120:intron | 25.0% |
| !!! | GAGTTTTTGTTTTGTTTTGA+GGG | + | chr2_1:5568650-5568669 | None:intergenic | 25.0% |
| !!! | AGAGTTTTTGTTTTGTTTTG+AGG | + | chr2_1:5568651-5568670 | None:intergenic | 25.0% |
| ! | AATTGGAGATTATGATACTT+AGG | - | chr2_1:5568756-5568775 | Msa0190120:intron | 25.0% |
| !!! | AGTTTTTCAACTCAAAACTT+AGG | - | chr2_1:5568823-5568842 | Msa0190120:intron | 25.0% |
| !!! | AGACTATAGTTTGCTTTATT+TGG | + | chr2_1:5569212-5569231 | None:intergenic | 25.0% |
| !! | TATTATCAAACAAGGGTTTT+GGG | + | chr2_1:5569265-5569284 | None:intergenic | 25.0% |
| !!! | GTTTCTAGTATTATCAAACA+AGG | + | chr2_1:5569273-5569292 | None:intergenic | 25.0% |
| !! | GAAATGGTTTCATTTAAGTT+TGG | + | chr2_1:5569446-5569465 | None:intergenic | 25.0% |
| !! | TGAAATTTTCAAAGCGAATA+TGG | + | chr2_1:5569495-5569514 | None:intergenic | 25.0% |
| ! | ATATAATCAGATCATGTAGT+TGG | + | chr2_1:5569983-5570002 | None:intergenic | 25.0% |
| ! | TGCAATTTCAAATCAAATGT+TGG | - | chr2_1:5570033-5570052 | Msa0190120:intron | 25.0% |
| ! | ACAGATAGCAATAATCATAT+GGG | + | chr2_1:5570114-5570133 | None:intergenic | 25.0% |
| ! | TACAGATAGCAATAATCATA+TGG | + | chr2_1:5570115-5570134 | None:intergenic | 25.0% |
| ! | TAGAATAAACTTTGACACTT+AGG | + | chr2_1:5570264-5570283 | None:intergenic | 25.0% |
| ! | ACTTCTTTAGCAAAAGTTTA+TGG | + | chr2_1:5570320-5570339 | None:intergenic | 25.0% |
| ! | AATATCTAAAGGCAATATTG+GGG | - | chr2_1:5570578-5570597 | Msa0190120:CDS | 25.0% |
| ! | ATATGAAATGACTGGTAAAT+GGG | + | chr2_1:5570614-5570633 | None:intergenic | 25.0% |
| TGAAACATCTACAAACTATG+AGG | + | chr2_1:5568094-5568113 | None:intergenic | 30.0% | |
| AATTGCGAAAAGAAGAAAGA+AGG | + | chr2_1:5568219-5568238 | None:intergenic | 30.0% | |
| GATCCTAAGAAATGAAATGA+AGG | + | chr2_1:5568402-5568421 | None:intergenic | 30.0% | |
| !!! | TTTTGTTTTGTTTTGAGGGA+AGG | + | chr2_1:5568646-5568665 | None:intergenic | 30.0% |
| !!! | GTTTTGTTTCTTACTGAGTT+TGG | - | chr2_1:5569043-5569062 | Msa0190120:intron | 30.0% |
| ! | GTATTATCAAACAAGGGTTT+TGG | + | chr2_1:5569266-5569285 | None:intergenic | 30.0% |
| ! | AGCTCTTATTTGATATACCT+TGG | - | chr2_1:5569557-5569576 | Msa0190120:CDS | 30.0% |
| ! | GCTCTTATTTGATATACCTT+GGG | - | chr2_1:5569558-5569577 | Msa0190120:CDS | 30.0% |
| AGAACATAAATTGAGGAGTA+AGG | + | chr2_1:5569646-5569665 | None:intergenic | 30.0% | |
| ! | TTGTTTGTATTGTCGTTTGA+AGG | - | chr2_1:5569712-5569731 | Msa0190120:intron | 30.0% |
| ! | TGTTTGTATTGTCGTTTGAA+GGG | - | chr2_1:5569713-5569732 | Msa0190120:intron | 30.0% |
| ! | TTAGTGCAATGTTTTGTCAT+TGG | + | chr2_1:5569903-5569922 | None:intergenic | 30.0% |
| ! | AATTTGGAGCAAGGAAATAT+GGG | + | chr2_1:5570006-5570025 | None:intergenic | 30.0% |
| ! | AAATTTGGAGCAAGGAAATA+TGG | + | chr2_1:5570007-5570026 | None:intergenic | 30.0% |
| ! | CAACAATAAAATTTGGAGCA+AGG | + | chr2_1:5570015-5570034 | None:intergenic | 30.0% |
| TAGTTAAAGAAATGAAGGCT+AGG | - | chr2_1:5570072-5570091 | Msa0190120:intron | 30.0% | |
| AGCAATAATCATATGGGTAT+GGG | + | chr2_1:5570108-5570127 | None:intergenic | 30.0% | |
| TAGCAATAATCATATGGGTA+TGG | + | chr2_1:5570109-5570128 | None:intergenic | 30.0% | |
| ! | TTTGAAACAATGTGTGAACA+TGG | - | chr2_1:5570135-5570154 | Msa0190120:intron | 30.0% |
| AAAGTGTACAAACTCTAAAC+AGG | + | chr2_1:5570197-5570216 | None:intergenic | 30.0% | |
| GCTGAAATTGTCTAATTACT+TGG | - | chr2_1:5570439-5570458 | Msa0190120:intron | 30.0% | |
| ! | ATTGTCTAATTACTTGGTGA+AGG | - | chr2_1:5570445-5570464 | Msa0190120:intron | 30.0% |
| !! | CTAACATAAAAGGCATTCAT+AGG | + | chr2_1:5570498-5570517 | None:intergenic | 30.0% |
| ! | AATGCCTTTTATGTTAGTGT+TGG | - | chr2_1:5570501-5570520 | Msa0190120:intron | 30.0% |
| GTAACCAACACTAACATAAA+AGG | + | chr2_1:5570508-5570527 | None:intergenic | 30.0% | |
| TAGAGAATGAACAAACGATA+TGG | + | chr2_1:5570530-5570549 | None:intergenic | 30.0% | |
| TATGAAATGACTGGTAAATG+GGG | + | chr2_1:5570613-5570632 | None:intergenic | 30.0% | |
| CATATGAAATGACTGGTAAA+TGG | + | chr2_1:5570615-5570634 | None:intergenic | 30.0% | |
| !! | AGGTTATTGACTTATTGTAG+AGG | + | chr2_1:5570655-5570674 | None:intergenic | 30.0% |
| !!! | TAAAAGAAGGCCTTTGTTTT+GGG | + | chr2_1:5570685-5570704 | None:intergenic | 30.0% |
| ! | TCTAATTTTGTTCACAAGAG+AGG | + | chr2_1:5570837-5570856 | None:intergenic | 30.0% |
| CTCTTGTGAACAAAATTAGA+AGG | - | chr2_1:5570837-5570856 | Msa0190120:five_prime_UTR | 30.0% | |
| TCTATCTTTCTTAGTTAGGG+AGG | + | chr2_1:5567885-5567904 | None:intergenic | 35.0% | |
| CATCTACAAACTATGAGGAA+AGG | + | chr2_1:5568089-5568108 | None:intergenic | 35.0% | |
| CACAAAAATCGCAATGAGAA+CGG | + | chr2_1:5568322-5568341 | None:intergenic | 35.0% | |
| !!! | ATTTTCAGGTTCTCGAGTAT+TGG | - | chr2_1:5568455-5568474 | Msa0190120:intron | 35.0% |
| !!! | TTTTCAGGTTCTCGAGTATT+GGG | - | chr2_1:5568456-5568475 | Msa0190120:intron | 35.0% |
| ! | ATGTAACTTGTGACTTTGCA+AGG | + | chr2_1:5568692-5568711 | None:intergenic | 35.0% |
| AAGGAAAGACTACATATGTG+TGG | + | chr2_1:5568877-5568896 | None:intergenic | 35.0% | |
| !! | GGTTTTTCTTTTTTGCAGTG+CGG | - | chr2_1:5569064-5569083 | Msa0190120:intron | 35.0% |
| ! | TGCTATTTGCTTCTTTCTTG+TGG | - | chr2_1:5569158-5569177 | Msa0190120:intron | 35.0% |
| TAAACTCAGGACAACATTCA+AGG | + | chr2_1:5569409-5569428 | None:intergenic | 35.0% | |
| ATAAGTGCAACGAAGAGAAA+TGG | + | chr2_1:5569462-5569481 | None:intergenic | 35.0% | |
| !!! | TTCCTCTCCTTTTTTGTTGT+CGG | - | chr2_1:5569613-5569632 | Msa0190120:CDS | 35.0% |
| CATAAATTGAGGAGTAAGGA+CGG | + | chr2_1:5569642-5569661 | None:intergenic | 35.0% | |
| !!! | GTTTTAGAAAACCAACGCAA+AGG | + | chr2_1:5569742-5569761 | None:intergenic | 35.0% |
| GAACTATAGACATGCACATA+TGG | + | chr2_1:5569864-5569883 | None:intergenic | 35.0% | |
| ! | TGTTTTGTCATTGGAACCAA+GGG | + | chr2_1:5569894-5569913 | None:intergenic | 35.0% |
| ! | ATGTTTTGTCATTGGAACCA+AGG | + | chr2_1:5569895-5569914 | None:intergenic | 35.0% |
| ! | AGAAATGAAGGCTAGGATTT+TGG | - | chr2_1:5570079-5570098 | Msa0190120:intron | 35.0% |
| ! | GAAATGAAGGCTAGGATTTT+GGG | - | chr2_1:5570080-5570099 | Msa0190120:intron | 35.0% |
| ! | AAATGAAGGCTAGGATTTTG+GGG | - | chr2_1:5570081-5570100 | Msa0190120:intron | 35.0% |
| CGAATACATAAACGAGGATA+TGG | + | chr2_1:5570239-5570258 | None:intergenic | 35.0% | |
| ATGAAATGACTGGTAAATGG+GGG | + | chr2_1:5570612-5570631 | None:intergenic | 35.0% | |
| !! | GTAAAAGAAGGCCTTTGTTT+TGG | + | chr2_1:5570686-5570705 | None:intergenic | 35.0% |
| TCTTTCTTAGTTAGGGAGGA+GGG | + | chr2_1:5567881-5567900 | None:intergenic | 40.0% | |
| ATCTTTCTTAGTTAGGGAGG+AGG | + | chr2_1:5567882-5567901 | None:intergenic | 40.0% | |
| TTCTCTTCATCTTCCTCTCT+AGG | + | chr2_1:5568017-5568036 | None:intergenic | 40.0% | |
| AGAGAGGAAGATGAAGAGAA+CGG | - | chr2_1:5568017-5568036 | Msa0190120:three_prime_UTR | 40.0% | |
| AACAGCAGAGAGAACGTTAA+CGG | + | chr2_1:5568153-5568172 | None:intergenic | 40.0% | |
| ! | CGTTCTCATTGCGATTTTTG+TGG | - | chr2_1:5568320-5568339 | Msa0190120:exon | 40.0% |
| AAACACGAACGTAGAACGTT+TGG | - | chr2_1:5568952-5568971 | Msa0190120:CDS | 40.0% | |
| AACACGAACGTAGAACGTTT+GGG | - | chr2_1:5568953-5568972 | Msa0190120:CDS | 40.0% | |
| TTGGGTGTAATGCAGAGAAT+TGG | - | chr2_1:5568971-5568990 | Msa0190120:CDS | 40.0% | |
| TGGCGTAGTTTACGTTATCT+TGG | - | chr2_1:5569178-5569197 | Msa0190120:intron | 40.0% | |
| !! | ATGTTTTGAACTCAGACCCA+AGG | + | chr2_1:5569577-5569596 | None:intergenic | 40.0% |
| TAGGAGCGAATACATAAACG+AGG | + | chr2_1:5570245-5570264 | None:intergenic | 40.0% | |
| TGCTTCTATGAACACTTGAC+AGG | - | chr2_1:5570344-5570363 | Msa0190120:intron | 40.0% | |
| TATGAACACTTGACAGGAGT+TGG | - | chr2_1:5570350-5570369 | Msa0190120:intron | 40.0% | |
| !! | ATAAAAGGCATTCATAGGCC+AGG | + | chr2_1:5570493-5570512 | None:intergenic | 40.0% |
| TTGTAGAGGCTCAAAACAGT+GGG | + | chr2_1:5570641-5570660 | None:intergenic | 40.0% | |
| ATTGTAGAGGCTCAAAACAG+TGG | + | chr2_1:5570642-5570661 | None:intergenic | 40.0% | |
| ! | TGAACTGTTGAAGTTGATCG+AGG | - | chr2_1:5570778-5570797 | Msa0190120:five_prime_UTR | 40.0% |
| ! | TGTTGAAGTTGATCGAGGAT+GGG | - | chr2_1:5570783-5570802 | Msa0190120:five_prime_UTR | 40.0% |
| ! | TTGTTCACAAGAGAGGTATG+AGG | + | chr2_1:5570830-5570849 | None:intergenic | 40.0% |
| GCAGAGAATAGCAGCTAAAG+CGG | + | chr2_1:5568126-5568145 | None:intergenic | 45.0% | |
| GCGATGATTCCGATGAATGA+AGG | + | chr2_1:5568246-5568265 | None:intergenic | 45.0% | |
| TGGTTCTCGTTGAGACTGAA+TGG | - | chr2_1:5568340-5568359 | Msa0190120:CDS | 45.0% | |
| CACCGACAACAAAAAAGGAG+AGG | + | chr2_1:5569618-5569637 | None:intergenic | 45.0% | |
| ACGGTCACCGACAACAAAAA+AGG | + | chr2_1:5569623-5569642 | None:intergenic | 45.0% | |
| CTCTAGTGATCTCTTGCTTC+TGG | + | chr2_1:5569772-5569791 | None:intergenic | 45.0% | |
| ACACATCACCTCAAGATCCT+TGG | + | chr2_1:5569804-5569823 | None:intergenic | 45.0% | |
| CTATAGTTCTCTGTCTCCCT+TGG | - | chr2_1:5569875-5569894 | Msa0190120:intron | 45.0% | |
| GCAACTGCTTGTGACAGAAT+AGG | - | chr2_1:5570395-5570414 | Msa0190120:CDS | 45.0% | |
| AAGGCTGAAGAGACGACTAA+AGG | - | chr2_1:5570464-5570483 | Msa0190120:intron | 45.0% | |
| AGAGACGACTAAAGGAAACC+TGG | - | chr2_1:5570472-5570491 | Msa0190120:intron | 45.0% | |
| ! | TGGGAGGCATATGAAATGAC+TGG | + | chr2_1:5570622-5570641 | None:intergenic | 45.0% |
| CTTCAACAGTTCAACGACGT+GGG | + | chr2_1:5570771-5570790 | None:intergenic | 45.0% | |
| ACTTCAACAGTTCAACGACG+TGG | + | chr2_1:5570772-5570791 | None:intergenic | 45.0% | |
| ! | CTGTTGAAGTTGATCGAGGA+TGG | - | chr2_1:5570782-5570801 | Msa0190120:five_prime_UTR | 45.0% |
| ! | GTTGAAGTTGATCGAGGATG+GGG | - | chr2_1:5570784-5570803 | Msa0190120:five_prime_UTR | 45.0% |
| AGACGTGAAGATGCCTAGAG+AGG | - | chr2_1:5568001-5568020 | Msa0190120:three_prime_UTR | 50.0% | |
| GAGGAAGATGAAGAGAACGG+TGG | - | chr2_1:5568020-5568039 | Msa0190120:three_prime_UTR | 50.0% | |
| ! | ACTCGACTCGTAGGTAGAAC+TGG | + | chr2_1:5568050-5568069 | None:intergenic | 50.0% |
| ! | CTTCGTTCAACTCGACTCGT+AGG | + | chr2_1:5568059-5568078 | None:intergenic | 50.0% |
| ACTATAGCCAGGGAAAGCTC+TGG | + | chr2_1:5569099-5569118 | None:intergenic | 50.0% | |
| AGAGCTTTCCCTGGCTATAG+TGG | - | chr2_1:5569098-5569117 | Msa0190120:intron | 50.0% | |
| GAGCTTTCCCTGGCTATAGT+GGG | - | chr2_1:5569099-5569118 | Msa0190120:intron | 50.0% | |
| AGCTTTCCCTGGCTATAGTG+GGG | - | chr2_1:5569100-5569119 | Msa0190120:intron | 50.0% | |
| TTGAAGGGAGTCCTTTGCGT+TGG | - | chr2_1:5569728-5569747 | Msa0190120:intron | 50.0% | |
| CACTAGAGAGCAAGCAACCA+AGG | - | chr2_1:5569784-5569803 | Msa0190120:intron | 50.0% | |
| GCAAGCAACCAAGGATCTTG+AGG | - | chr2_1:5569793-5569812 | Msa0190120:intron | 50.0% | |
| GACTGGTAAATGGGGGAACA+CGG | + | chr2_1:5570605-5570624 | None:intergenic | 50.0% | |
| TAGAGGCTCAAAACAGTGGG+AGG | + | chr2_1:5570638-5570657 | None:intergenic | 50.0% | |
| !!! | CCTTTGTTTTGGGTGTGGAG+AGG | + | chr2_1:5570675-5570694 | None:intergenic | 50.0% |
| CCTCTCCACACCCAAAACAA+AGG | - | chr2_1:5570672-5570691 | Msa0190120:CDS | 50.0% | |
| !!! | GAAGGCCTTTGTTTTGGGTG+TGG | + | chr2_1:5570680-5570699 | None:intergenic | 50.0% |
| ! | ACAAGAGAGGTATGAGGACG+AGG | + | chr2_1:5570824-5570843 | None:intergenic | 50.0% |
| !! | CAGGTTCTCGAGTATTGGGC+AGG | - | chr2_1:5568460-5568479 | Msa0190120:intron | 55.0% |
| !! | TTCTCGAGTATTGGGCAGGC+AGG | - | chr2_1:5568464-5568483 | Msa0190120:intron | 55.0% |
| !! | TCTCGAGTATTGGGCAGGCA+GGG | - | chr2_1:5568465-5568484 | Msa0190120:intron | 55.0% |
| GTGATGACCAGAGCTTTCCC+TGG | - | chr2_1:5569089-5569108 | Msa0190120:intron | 55.0% | |
| TTCGCTCCCCACTATAGCCA+GGG | + | chr2_1:5569109-5569128 | None:intergenic | 55.0% | |
| TTTCGCTCCCCACTATAGCC+AGG | + | chr2_1:5569110-5569129 | None:intergenic | 55.0% | |
| !! | CTCGAGTATTGGGCAGGCAG+GGG | - | chr2_1:5568466-5568485 | Msa0190120:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 5567869 | 5570878 | 5567869 | ID=Msa0190120;Name=Msa0190120 |
| chr2_1 | mRNA | 5567869 | 5570878 | 5567869 | ID=Msa0190120-mRNA-1;Parent=Msa0190120;Name=Msa0190120-mRNA-1;_AED=0.07;_eAED=0.07;_QI=142|1|1|1|1|1|6|462|190 |
| chr2_1 | exon | 5567869 | 5568381 | 5567869 | ID=Msa0190120-mRNA-1:exon:2505;Parent=Msa0190120-mRNA-1 |
| chr2_1 | exon | 5568933 | 5569013 | 5568933 | ID=Msa0190120-mRNA-1:exon:2504;Parent=Msa0190120-mRNA-1 |
| chr2_1 | exon | 5569548 | 5569665 | 5569548 | ID=Msa0190120-mRNA-1:exon:2503;Parent=Msa0190120-mRNA-1 |
| chr2_1 | exon | 5570244 | 5570284 | 5570244 | ID=Msa0190120-mRNA-1:exon:2502;Parent=Msa0190120-mRNA-1 |
| chr2_1 | exon | 5570361 | 5570456 | 5570361 | ID=Msa0190120-mRNA-1:exon:2501;Parent=Msa0190120-mRNA-1 |
| chr2_1 | exon | 5570551 | 5570878 | 5570551 | ID=Msa0190120-mRNA-1:exon:2500;Parent=Msa0190120-mRNA-1 |
| chr2_1 | five_prime_UTR | 5570737 | 5570878 | 5570737 | ID=Msa0190120-mRNA-1:five_prime_utr;Parent=Msa0190120-mRNA-1 |
| chr2_1 | CDS | 5570551 | 5570736 | 5570551 | ID=Msa0190120-mRNA-1:cds;Parent=Msa0190120-mRNA-1 |
| chr2_1 | CDS | 5570361 | 5570456 | 5570361 | ID=Msa0190120-mRNA-1:cds;Parent=Msa0190120-mRNA-1 |
| chr2_1 | CDS | 5570244 | 5570284 | 5570244 | ID=Msa0190120-mRNA-1:cds;Parent=Msa0190120-mRNA-1 |
| chr2_1 | CDS | 5569548 | 5569665 | 5569548 | ID=Msa0190120-mRNA-1:cds;Parent=Msa0190120-mRNA-1 |
| chr2_1 | CDS | 5568933 | 5569013 | 5568933 | ID=Msa0190120-mRNA-1:cds;Parent=Msa0190120-mRNA-1 |
| chr2_1 | CDS | 5568331 | 5568381 | 5568331 | ID=Msa0190120-mRNA-1:cds;Parent=Msa0190120-mRNA-1 |
| chr2_1 | three_prime_UTR | 5567869 | 5568330 | 5567869 | ID=Msa0190120-mRNA-1:three_prime_utr;Parent=Msa0190120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
