AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1335560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1335560 MtrunA17_Chr5g0401681 95.591 499 21 1 1 498 1 499 0.0 991
Msa1335560 MtrunA17_Chr4g0053621 66.802 494 159 2 1 489 1 494 0.0 691
Msa1335560 MtrunA17_Chr4g0052861 60.976 492 185 3 2 493 10 494 0.0 655
Msa1335560 MtrunA17_Chr4g0052881 62.705 488 178 2 6 489 4 491 0.0 638
Msa1335560 MtrunA17_Chr2g0296661 67.683 492 154 2 2 488 3 494 0.0 637
Msa1335560 MtrunA17_Chr5g0401691 59.229 493 192 4 4 493 25 511 0.0 610
Msa1335560 MtrunA17_Chr4g0052851 57.261 482 192 4 14 493 17 486 0.0 583
Msa1335560 MtrunA17_Chr2g0296651 57.606 493 206 2 4 493 2 494 0.0 573
Msa1335560 MtrunA17_Chr4g0017411 56.904 478 192 4 14 489 14 479 0.0 567
Msa1335560 MtrunA17_Chr4g0039391 46.623 459 233 5 41 490 45 500 3.40e-148 433
Msa1335560 MtrunA17_Chr8g0344181 38.285 478 273 7 30 491 37 508 5.31e-108 330
Msa1335560 MtrunA17_Chr8g0339311 37.271 491 285 7 25 494 38 526 1.39e-107 330
Msa1335560 MtrunA17_Chr6g0451751 36.187 514 297 8 6 493 18 526 9.95e-105 323
Msa1335560 MtrunA17_Chr3g0084921 37.160 514 284 12 5 489 7 510 1.50e-104 322
Msa1335560 MtrunA17_Chr2g0310391 36.747 498 292 7 8 489 3 493 1.55e-103 318
Msa1335560 MtrunA17_Chr6g0451691 36.782 522 296 9 9 497 14 534 1.76e-103 320
Msa1335560 MtrunA17_Chr8g0344151 37.107 477 276 8 30 489 35 504 2.32e-103 318
Msa1335560 MtrunA17_Chr2g0310381 36.235 494 294 6 6 485 3 489 8.46e-103 317
Msa1335560 MtrunA17_Chr3g0082701 36.031 519 304 7 2 493 10 527 9.31e-103 318
Msa1335560 MtrunA17_Chr6g0466941 36.416 519 299 9 2 493 6 520 1.10e-102 317
Msa1335560 MtrunA17_Chr6g0451781 38.430 484 271 7 39 497 82 563 1.11e-102 318
Msa1335560 MtrunA17_Chr8g0344191 35.953 509 299 8 3 494 45 543 1.97e-102 317
Msa1335560 MtrunA17_Chr1g0174481 36.706 504 283 11 6 486 4 494 8.57e-102 314
Msa1335560 MtrunA17_Chr8g0339331 37.895 475 278 8 32 489 39 513 2.79e-101 313
Msa1335560 MtrunA17_Chr6g0466901 35.938 512 302 8 2 489 6 515 4.25e-101 313
Msa1335560 MtrunA17_Chr3g0086691 36.966 468 275 5 40 489 41 506 2.61e-99 308
Msa1335560 MtrunA17_Chr6g0458561 36.779 503 295 11 14 494 30 531 2.74e-99 309
Msa1335560 MtrunA17_Chr4g0061381 35.881 471 274 8 40 489 40 503 1.38e-98 306
Msa1335560 MtrunA17_Chr3g0116681 35.271 499 291 11 8 487 16 501 3.67e-98 305
Msa1335560 MtrunA17_Chr4g0057001 35.041 488 298 5 14 489 33 513 8.08e-98 305
Msa1335560 MtrunA17_Chr6g0451741 35.547 512 298 8 9 489 34 544 1.18e-97 305
Msa1335560 MtrunA17_Chr8g0382901 36.327 490 290 7 13 489 474 954 1.57e-97 315
Msa1335560 MtrunA17_Chr8g0382901 36.566 495 275 10 6 485 1 471 4.91e-92 300
Msa1335560 MtrunA17_Chr3g0116741 37.577 487 279 10 12 482 32 509 4.30e-97 303
Msa1335560 MtrunA17_Chr4g0058191 35.628 494 294 7 6 486 3 485 1.51e-96 300
Msa1335560 MtrunA17_Chr3g0101601 34.638 511 293 11 4 491 7 499 1.25e-95 298
Msa1335560 MtrunA17_Chr4g0047691 35.882 510 295 8 2 493 23 518 2.03e-95 298
Msa1335560 MtrunA17_Chr7g0258221 35.743 498 288 9 5 478 4 493 3.15e-95 298
Msa1335560 MtrunA17_Chr2g0304871 35.189 503 301 8 14 494 19 518 9.98e-95 296
Msa1335560 MtrunA17_Chr4g0008101 34.816 517 305 8 10 496 15 529 1.05e-94 297
Msa1335560 MtrunA17_Chr1g0174461 35.913 504 292 11 4 486 6 499 1.16e-94 296
Msa1335560 MtrunA17_Chr3g0101631 34.861 502 288 10 11 491 15 498 1.61e-94 295
Msa1335560 MtrunA17_Chr3g0101721 34.836 488 282 10 30 495 36 509 1.69e-94 296
Msa1335560 MtrunA17_Chr4g0047661 34.800 500 292 9 8 486 28 514 1.75e-94 296
Msa1335560 MtrunA17_Chr4g0011961 36.327 490 290 9 14 488 12 494 3.81e-94 294
Msa1335560 MtrunA17_Chr4g0058281 36.581 503 287 9 2 483 17 508 5.04e-94 295
Msa1335560 MtrunA17_Chr4g0047631 34.861 502 293 8 3 486 24 509 7.41e-94 294
Msa1335560 MtrunA17_Chr1g0174451 34.677 496 294 8 5 478 7 494 8.10e-94 294
Msa1335560 MtrunA17_Chr3g0086651 34.971 509 308 7 1 489 1 506 2.38e-93 293
Msa1335560 MtrunA17_Chr7g0255531 32.939 507 308 10 3 491 6 498 3.97e-93 292
Msa1335560 MtrunA17_Chr3g0101621 33.988 509 300 10 1 491 3 493 4.21e-93 291
Msa1335560 MtrunA17_Chr6g0472311 35.673 513 290 11 5 486 11 514 5.37e-93 292
Msa1335560 MtrunA17_Chr4g0058231 34.843 508 298 9 6 490 2 499 5.76e-93 291
Msa1335560 MtrunA17_Chr4g0046631 35.833 480 283 5 29 489 44 517 6.27e-93 292
Msa1335560 MtrunA17_Chr4g0011901 36.495 485 285 9 20 488 18 495 1.11e-92 290
Msa1335560 MtrunA17_Chr1g0174471 34.921 504 296 11 5 486 22 515 1.48e-92 291
Msa1335560 MtrunA17_Chr4g0030701 35.908 479 267 9 32 478 36 506 2.83e-92 290
Msa1335560 MtrunA17_Chr3g0086661 34.971 509 308 7 1 489 1 506 3.88e-92 290
Msa1335560 MtrunA17_Chr5g0445451 37.349 498 271 14 4 479 12 490 9.03e-92 288
Msa1335560 MtrunA17_Chr1g0200961 36.978 503 289 9 1 485 1 493 9.24e-92 288
Msa1335560 MtrunA17_Chr3g0101731 33.397 521 307 10 1 495 1 507 9.31e-92 288
Msa1335560 MtrunA17_Chr3g0101651 35.010 477 275 8 28 482 35 498 3.59e-91 287
Msa1335560 MtrunA17_Chr5g0403331 35.388 503 285 12 3 479 6 494 3.60e-91 287
Msa1335560 MtrunA17_Chr3g0094231 34.029 479 294 7 23 489 31 499 4.60e-91 286
Msa1335560 MtrunA17_Chr5g0445441 37.325 501 273 13 4 482 53 534 5.86e-91 287
Msa1335560 MtrunA17_Chr4g0047641 34.325 504 301 8 2 486 21 513 6.89e-91 286
Msa1335560 MtrunA17_Chr5g0403351 33.135 504 300 9 3 482 6 496 8.24e-91 286
Msa1335560 MtrunA17_Chr3g0094171 34.870 499 300 9 9 489 16 507 8.56e-91 286
Msa1335560 MtrunA17_Chr6g0484811 34.585 506 295 12 8 489 12 505 5.00e-90 284
Msa1335560 MtrunA17_Chr4g0058201 34.855 482 289 8 21 486 18 490 9.97e-90 283
Msa1335560 MtrunA17_Chr6g0451641 33.792 509 301 11 5 487 15 513 2.04e-89 283
Msa1335560 MtrunA17_Chr7g0254641 34.021 485 295 8 27 489 33 514 2.09e-89 283
Msa1335560 MtrunA17_Chr5g0430131 34.118 510 304 9 1 489 5 503 4.42e-89 281
Msa1335560 MtrunA17_Chr5g0430031 33.721 516 303 11 1 489 1 504 5.48e-89 281
Msa1335560 MtrunA17_Chr8g0362701 33.700 454 278 6 42 478 46 493 6.43e-89 281
Msa1335560 MtrunA17_Chr3g0101701 33.136 507 300 10 2 482 5 498 8.43e-89 281
Msa1335560 MtrunA17_Chr7g0235551 33.400 497 297 9 5 476 7 494 2.20e-88 280
Msa1335560 MtrunA17_Chr3g0101691 33.728 507 297 10 2 482 5 498 3.98e-88 279
Msa1335560 MtrunA17_Chr5g0419691 35.518 473 282 8 32 488 30 495 4.03e-88 279
Msa1335560 MtrunA17_Chr5g0445381 36.600 500 276 13 4 479 39 521 8.45e-88 279
Msa1335560 MtrunA17_Chr1g0174441 33.400 497 296 10 9 478 27 515 8.50e-88 279
Msa1335560 MtrunA17_Chr5g0445421 35.542 498 265 12 4 482 86 546 1.02e-87 279
Msa1335560 MtrunA17_Chr4g0011881 37.931 493 272 13 18 488 15 495 1.38e-87 277
Msa1335560 MtrunA17_Chr5g0445461 34.843 508 294 11 4 491 12 502 1.63e-87 277
Msa1335560 MtrunA17_Chr3g0101661 33.663 505 293 11 2 479 5 494 2.69e-87 277
Msa1335560 MtrunA17_Chr5g0431641 34.911 507 299 11 2 491 10 502 3.62e-87 276
Msa1335560 MtrunA17_Chr4g0011921 36.382 503 291 13 6 488 2 495 5.01e-87 276
Msa1335560 MtrunA17_Chr1g0156101 34.216 491 299 8 24 491 25 514 6.96e-87 276
Msa1335560 MtrunA17_Chr8g0361471 34.310 478 275 12 6 459 6 468 7.14e-87 276
Msa1335560 MtrunA17_Chr3g0101671 32.567 522 308 12 1 492 1 508 1.05e-86 275
Msa1335560 MtrunA17_Chr3g0101811 33.647 532 298 13 3 494 5 521 1.39e-86 275
Msa1335560 MtrunA17_Chr1g0164211 37.020 443 259 7 31 462 31 464 2.49e-86 274
Msa1335560 MtrunA17_Chr5g0430101 33.072 511 305 10 2 489 5 501 2.58e-86 274
Msa1335560 MtrunA17_Chr6g0465511 33.962 477 278 11 6 459 6 468 3.85e-86 274
Msa1335560 MtrunA17_Chr3g0101711 32.233 515 310 11 1 492 9 507 4.31e-86 274
Msa1335560 MtrunA17_Chr5g0406651 36.585 492 287 9 15 488 12 496 4.83e-86 273
Msa1335560 MtrunA17_Chr4g0024771 32.738 504 305 10 8 491 13 502 7.74e-86 273
Msa1335560 MtrunA17_Chr6g0484841 33.266 493 294 10 20 489 24 504 1.16e-85 273
Msa1335560 MtrunA17_Chr6g0466331 34.172 477 277 12 6 459 6 468 1.21e-85 273
Msa1335560 MtrunA17_Chr3g0101751 33.527 516 305 11 3 494 12 513 1.53e-85 273
Msa1335560 MtrunA17_Chr1g0160851 33.871 496 302 9 3 483 7 491 3.69e-85 271
Msa1335560 MtrunA17_Chr5g0430081 32.353 510 312 9 2 489 4 502 4.45e-85 271
Msa1335560 MtrunA17_Chr5g0431671 34.440 482 281 10 30 491 37 503 4.57e-85 271
Msa1335560 MtrunA17_Chr4g0056951 35.438 491 292 8 15 489 27 508 5.67e-85 271
Msa1335560 MtrunA17_Chr4g0030711 32.553 470 276 6 42 478 48 509 7.92e-85 271
Msa1335560 MtrunA17_Chr8g0357421 34.442 511 296 13 9 493 8 505 8.21e-85 270
Msa1335560 MtrunA17_Chr3g0101581 31.898 511 313 10 2 490 6 503 9.28e-85 270
Msa1335560 MtrunA17_Chr1g0213671 35.135 481 277 11 30 485 33 503 6.48e-84 268
Msa1335560 MtrunA17_Chr4g0011981 35.052 485 290 10 21 488 19 495 1.31e-83 267
Msa1335560 MtrunA17_Chr5g0431511 33.473 478 291 9 31 489 33 502 2.12e-83 267
Msa1335560 MtrunA17_Chr5g0403321 33.473 478 280 8 31 482 34 499 2.13e-83 267
Msa1335560 MtrunA17_Chr3g0101821 34.104 519 300 12 1 492 1 504 2.43e-83 266
Msa1335560 MtrunA17_Chr4g0011871 34.672 473 287 8 32 488 30 496 2.78e-83 266
Msa1335560 MtrunA17_Chr8g0357431 34.698 513 293 13 9 493 8 506 2.83e-83 266
Msa1335560 MtrunA17_Chr5g0446151 34.681 470 275 13 30 482 40 494 3.20e-83 266
Msa1335560 MtrunA17_Chr8g0390881 32.816 515 307 13 1 489 3 504 3.85e-83 266
Msa1335560 MtrunA17_Chr6g0463791 35.446 505 285 15 2 482 5 492 8.22e-83 265
Msa1335560 MtrunA17_Chr3g0101801 32.816 515 308 11 4 494 13 513 1.35e-82 265
Msa1335560 MtrunA17_Chr5g0446161 33.071 508 299 14 1 482 1 493 1.84e-82 264
Msa1335560 MtrunA17_Chr5g0431501 33.264 478 292 9 31 489 33 502 2.40e-82 264
Msa1335560 MtrunA17_Chr5g0431461 33.264 478 292 9 31 489 33 502 2.40e-82 264
Msa1335560 MtrunA17_Chr3g0101611 33.051 472 283 8 31 482 38 496 2.77e-82 264
Msa1335560 MtrunA17_Chr3g0101761 33.528 513 303 12 4 492 6 504 3.80e-82 263
Msa1335560 MtrunA17_Chr8g0362481 33.178 428 263 6 68 478 3 424 4.01e-82 261
Msa1335560 MtrunA17_Chr4g0076161 33.728 507 290 14 5 482 7 496 7.08e-82 263
Msa1335560 MtrunA17_Chr1g0207841 33.051 472 277 8 38 478 45 508 1.16e-81 263
Msa1335560 MtrunA17_Chr8g0356001 32.797 497 309 8 5 483 11 500 1.49e-81 262
Msa1335560 MtrunA17_Chr5g0445531 32.383 491 293 9 22 491 29 501 2.38e-81 261
Msa1335560 MtrunA17_Chr7g0258211 34.423 459 275 7 38 477 46 497 6.36e-81 260
Msa1335560 MtrunA17_Chr4g0058261 33.817 482 286 9 25 483 56 527 6.62e-81 261
Msa1335560 MtrunA17_Chr6g0463801 32.500 480 296 8 18 482 24 490 6.97e-81 260
Msa1335560 MtrunA17_Chr5g0430091 31.507 511 317 8 1 489 5 504 9.04e-81 260
Msa1335560 MtrunA17_Chr1g0205371 34.068 499 305 9 2 485 5 494 1.04e-80 259
Msa1335560 MtrunA17_Chr3g0101571 31.809 503 304 10 11 491 16 501 2.87e-80 258
Msa1335560 MtrunA17_Chr1g0205361 34.115 469 286 10 31 485 34 493 3.13e-80 258
Msa1335560 MtrunA17_Chr4g0035921 31.801 522 304 11 5 489 7 513 3.44e-80 259
Msa1335560 MtrunA17_Chr7g0224551 32.812 512 287 12 3 478 7 497 5.84e-80 258
Msa1335560 MtrunA17_Chr1g0156081 34.623 491 297 8 24 491 49 538 1.04e-79 258
Msa1335560 MtrunA17_Chr5g0395331 34.073 496 292 12 11 485 20 501 2.06e-79 256
Msa1335560 MtrunA17_Chr7g0224561 32.617 512 288 12 3 478 7 497 7.93e-79 255
Msa1335560 MtrunA17_Chr4g0020041 31.548 504 306 11 4 482 6 495 9.70e-79 254
Msa1335560 MtrunA17_Chr3g0101831 34.100 522 299 13 1 494 3 507 3.13e-78 253
Msa1335560 MtrunA17_Chr5g0395321 32.809 509 300 13 5 489 9 499 4.60e-77 251
Msa1335560 MtrunA17_Chr5g0405001 31.631 509 307 10 8 489 19 513 5.08e-77 250
Msa1335560 MtrunA17_Chr7g0246221 31.062 499 313 10 5 484 12 498 7.40e-77 249
Msa1335560 MtrunA17_Chr6g0451681 32.329 498 257 9 6 487 40 473 1.49e-76 248
Msa1335560 MtrunA17_Chr7g0218611 33.747 483 293 11 23 487 25 498 1.60e-76 249
Msa1335560 MtrunA17_Chr5g0430111 33.953 430 259 6 1 416 5 423 3.19e-76 246
Msa1335560 MtrunA17_Chr8g0372251 32.245 490 292 10 26 489 30 505 5.15e-76 248
Msa1335560 MtrunA17_Chr3g0101741 31.663 439 275 7 68 494 3 428 1.31e-75 244
Msa1335560 MtrunA17_Chr1g0162811 31.456 515 314 11 4 494 6 505 1.59e-75 246
Msa1335560 MtrunA17_Chr4g0039901 32.712 483 300 7 19 487 26 497 8.86e-75 244
Msa1335560 MtrunA17_Chr5g0395381 32.008 503 276 11 6 485 10 469 1.20e-74 243
Msa1335560 MtrunA17_Chr8g0355961 32.979 470 293 7 5 459 11 473 1.93e-74 243
Msa1335560 MtrunA17_Chr2g0280261 34.177 474 283 10 25 482 27 487 3.60e-74 243
Msa1335560 MtrunA17_Chr1g0167321 33.531 507 298 13 1 482 1 493 7.67e-74 242
Msa1335560 MtrunA17_Chr8g0351801 31.568 472 279 10 41 477 44 506 9.20e-74 242
Msa1335560 MtrunA17_Chr1g0162801 32.742 507 297 10 4 482 6 496 1.09e-73 241
Msa1335560 MtrunA17_Chr7g0218601 32.591 494 305 13 11 487 15 497 1.82e-73 241
Msa1335560 MtrunA17_Chr7g0265611 32.143 504 303 11 9 488 28 516 5.23e-73 240
Msa1335560 MtrunA17_Chr7g0246151 31.681 464 285 10 42 484 45 497 1.11e-72 239
Msa1335560 MtrunA17_Chr7g0246121 32.196 469 287 11 42 490 45 502 2.04e-71 235
Msa1335560 MtrunA17_Chr1g0176831 31.435 474 295 9 4 459 33 494 3.79e-71 235
Msa1335560 MtrunA17_Chr2g0314731 31.707 492 310 10 5 478 2 485 7.51e-71 233
Msa1335560 MtrunA17_Chr4g0046351 30.830 506 282 17 25 486 26 507 2.93e-70 233
Msa1335560 MtrunA17_Chr7g0246131 32.480 508 310 12 3 487 5 502 2.93e-69 229
Msa1335560 MtrunA17_Chr4g0046321 30.830 506 282 17 25 486 26 507 4.33e-69 229
Msa1335560 MtrunA17_Chr2g0314721 32.623 469 286 9 8 459 20 475 4.95e-69 229
Msa1335560 MtrunA17_Chr4g0046331 30.075 532 295 18 8 486 2 509 5.82e-69 229
Msa1335560 MtrunA17_Chr1g0197881 30.426 470 301 8 5 459 3 461 1.19e-64 217
Msa1335560 MtrunA17_Chr1g0200951 31.535 482 287 16 34 494 64 523 3.07e-64 217
Msa1335560 MtrunA17_Chr1g0197891 30.786 471 299 8 5 459 3 462 3.30e-64 216
Msa1335560 MtrunA17_Chr1g0197851 30.361 471 301 8 5 459 3 462 5.57e-64 215
Msa1335560 MtrunA17_Chr1g0198191 30.097 515 319 12 3 489 14 515 5.75e-64 216
Msa1335560 MtrunA17_Chr5g0432751 30.043 466 292 10 31 473 33 487 2.44e-63 214
Msa1335560 MtrunA17_Chr5g0419451 28.838 482 314 11 20 488 49 514 2.26e-61 209
Msa1335560 MtrunA17_Chr1g0197871 29.677 465 300 9 11 459 9 462 3.30e-61 208
Msa1335560 MtrunA17_Chr8g0346261 28.243 478 306 14 33 495 86 541 1.43e-58 202
Msa1335560 MtrunA17_Chr1g0210091 29.451 455 291 10 40 473 74 519 6.46e-58 200
Msa1335560 MtrunA17_Chr3g0107611 26.598 485 323 11 3 458 19 499 3.10e-57 199
Msa1335560 MtrunA17_Chr8g0377341 29.053 475 309 12 34 494 70 530 3.13e-56 196
Msa1335560 MtrunA17_Chr7g0246181 30.786 458 285 13 42 478 45 491 9.62e-56 194
Msa1335560 MtrunA17_Chr1g0160861 36.897 290 167 5 208 483 45 332 2.67e-55 188
Msa1335560 MtrunA17_Chr5g0430071 34.437 302 178 6 208 489 56 357 5.47e-55 188
Msa1335560 MtrunA17_Chr8g0370641 28.429 503 333 13 1 479 10 509 6.43e-55 192
Msa1335560 MtrunA17_Chr8g0370651 27.680 513 338 13 7 489 13 522 3.08e-53 187
Msa1335560 MtrunA17_Chr4g0074581 29.216 510 312 14 8 485 46 538 5.63e-52 184
Msa1335560 MtrunA17_Chr1g0174431 44.724 199 95 3 298 482 1 198 2.32e-51 174
Msa1335560 MtrunA17_Chr4g0046681 42.723 213 115 1 284 489 17 229 9.03e-51 173
Msa1335560 MtrunA17_Chr8g0364651 27.767 515 317 15 8 489 6 498 1.20e-50 180
Msa1335560 MtrunA17_Chr6g0451811 45.755 212 107 2 295 498 1 212 1.31e-49 169
Msa1335560 MtrunA17_Chr3g0107541 26.815 496 335 10 4 476 23 513 1.89e-49 177
Msa1335560 MtrunA17_Chr5g0409051 26.296 521 332 14 5 489 4 508 3.22e-49 176
Msa1335560 MtrunA17_Chr2g0310351 42.289 201 108 2 298 490 1 201 3.86e-49 167
Msa1335560 MtrunA17_Chr2g0280071 29.119 522 318 16 1 489 34 536 4.95e-49 179
Msa1335560 MtrunA17_Chr2g0280121 29.399 466 290 12 49 489 58 509 2.49e-48 174
Msa1335560 MtrunA17_Chr5g0431591 34.130 293 177 6 206 482 19 311 4.23e-48 168
Msa1335560 MtrunA17_Chr2g0280081 29.923 518 323 13 1 489 498 1004 1.03e-47 177
Msa1335560 MtrunA17_Chr2g0280081 28.800 500 322 11 1 476 1 490 3.74e-43 164
Msa1335560 MtrunA17_Chr5g0413911 29.209 493 301 11 30 484 41 523 5.84e-47 171
Msa1335560 MtrunA17_Chr8g0387101 29.425 452 288 12 55 484 59 501 1.10e-45 167
Msa1335560 MtrunA17_Chr4g0058211 43.077 195 105 2 298 486 19 213 1.40e-45 159
Msa1335560 MtrunA17_Chr4g0011941 44.503 191 96 3 298 479 1 190 1.44e-45 158
Msa1335560 MtrunA17_Chr4g0011851 37.441 211 124 2 286 488 4 214 2.18e-44 155
Msa1335560 MtrunA17_Chr5g0402981 44.211 190 98 3 308 489 2 191 2.20e-44 155
Msa1335560 MtrunA17_Chr2g0334021 26.793 474 311 14 25 478 30 487 2.27e-44 163
Msa1335560 MtrunA17_Chr5g0402971 33.451 284 169 5 29 297 38 316 3.21e-44 158
Msa1335560 MtrunA17_Chr6g0451771 41.624 197 108 1 298 487 22 218 9.74e-44 154
Msa1335560 MtrunA17_Chr4g0046691 36.475 244 138 5 25 262 31 263 1.68e-43 156
Msa1335560 MtrunA17_Chr2g0280041 27.961 515 333 12 1 489 33 535 4.11e-43 160
Msa1335560 MtrunA17_Chr1g0174421 32.028 281 175 5 30 301 46 319 2.85e-42 153
Msa1335560 MtrunA17_Chr4g0046671 31.496 254 157 4 32 275 45 291 1.24e-41 151
Msa1335560 MtrunA17_Chr6g0477081 36.318 201 121 1 208 408 48 241 5.65e-41 147
Msa1335560 MtrunA17_Chr4g0046661 41.429 210 116 1 287 489 14 223 7.19e-41 146
Msa1335560 MtrunA17_Chr1g0156061 30.372 484 240 14 25 482 49 461 1.27e-40 152
Msa1335560 MtrunA17_Chr8g0390871 37.981 208 119 4 291 489 20 226 5.27e-40 144
Msa1335560 MtrunA17_Chr5g0446101 31.861 317 193 9 178 482 1 306 1.29e-39 145
Msa1335560 MtrunA17_Chr8g0364631 28.337 487 313 9 30 490 31 507 1.29e-39 150
Msa1335560 MtrunA17_Chr2g0314781 44.375 160 83 2 314 467 1 160 1.73e-39 140
Msa1335560 MtrunA17_Chr6g0451801 29.032 310 199 5 9 297 14 323 1.92e-39 145
Msa1335560 MtrunA17_Chr4g0011931 33.444 302 184 8 6 297 2 296 5.04e-39 143
Msa1335560 MtrunA17_Chr6g0463611 33.101 287 172 8 2 281 19 292 1.67e-36 137
Msa1335560 MtrunA17_Chr4g0011861 31.769 277 175 6 32 300 30 300 8.05e-36 135
Msa1335560 MtrunA17_Chr3g0101591 37.500 192 112 2 299 482 40 231 1.64e-35 132
Msa1335560 MtrunA17_Chr6g0463621 38.071 197 109 4 298 482 1 196 1.64e-35 131
Msa1335560 MtrunA17_Chr5g0445371 32.700 263 127 8 243 486 1 232 1.51e-33 127
Msa1335560 MtrunA17_Chr5g0430151 40.000 175 96 4 324 489 1 175 5.71e-33 123
Msa1335560 MtrunA17_Chr3g0105761 36.000 200 110 3 299 482 1 198 1.03e-32 124
Msa1335560 MtrunA17_Chr5g0423621 37.705 183 98 5 314 485 1 178 4.57e-32 121
Msa1335560 MtrunA17_Chr5g0430041 37.356 174 94 3 324 482 1 174 1.85e-31 119
Msa1335560 MtrunA17_Chr5g0445751 30.739 257 162 7 24 277 36 279 2.21e-31 123
Msa1335560 MtrunA17_Chr5g0445351 40.244 164 90 2 327 482 53 216 5.67e-31 119
Msa1335560 MtrunA17_Chr0c19g0493771 24.893 466 305 13 50 492 210 653 2.17e-30 125
Msa1335560 MtrunA17_Chr3g0086681 38.854 157 84 2 345 489 12 168 2.83e-30 116
Msa1335560 MtrunA17_Chr4g0046701 38.854 157 89 1 340 489 1 157 2.21e-29 113
Msa1335560 MtrunA17_Chr3g0116731 41.353 133 69 2 351 482 3 127 1.12e-28 110
Msa1335560 MtrunA17_Chr3g0107551 35.294 170 100 2 298 458 5 173 1.12e-28 112
Msa1335560 MtrunA17_Chr5g0445761 39.521 167 96 1 298 459 1 167 1.38e-28 112
Msa1335560 MtrunA17_Chr2g0280011 33.005 203 124 2 299 489 9 211 2.59e-28 112
Msa1335560 MtrunA17_Chr4g0030741 28.328 293 183 7 40 321 73 349 3.02e-28 115
Msa1335560 MtrunA17_Chr1g0207851 31.839 223 144 4 38 260 45 259 9.67e-28 114
Msa1335560 MtrunA17_Chr3g0117301 41.379 116 63 1 349 459 1 116 2.52e-27 106
Msa1335560 MtrunA17_Chr5g0445411 40.123 162 92 3 3 161 18 177 5.07e-27 107
Msa1335560 MtrunA17_Chr2g0280061 33.684 190 114 2 299 476 9 198 5.13e-27 108
Msa1335560 MtrunA17_Chr3g0135841 22.555 501 324 13 33 483 44 530 8.23e-27 113
Msa1335560 MtrunA17_Chr2g0293411 25.055 451 291 16 30 461 40 462 3.14e-26 111
Msa1335560 MtrunA17_Chr5g0444981 43.871 155 81 2 310 459 23 176 3.94e-26 105
Msa1335560 MtrunA17_Chr6g0451761 32.143 280 151 9 3 274 12 260 1.22e-25 106
Msa1335560 MtrunA17_Chr5g0400421 25.000 464 286 20 27 464 41 468 3.08e-25 108
Msa1335560 MtrunA17_Chr3g0101541 40.000 125 70 1 346 465 1 125 3.60e-24 97.8
Msa1335560 MtrunA17_Chr2g0310371 37.143 140 88 0 9 148 6 145 4.54e-24 98.2
Msa1335560 MtrunA17_Chr2g0293421 24.283 453 281 17 30 457 44 459 7.12e-24 104
Msa1335560 MtrunA17_Chr5g0430171 27.119 236 159 3 1 234 5 229 2.55e-23 98.6
Msa1335560 MtrunA17_Chr4g0028321 36.090 133 76 2 366 489 25 157 3.25e-23 96.3
Msa1335560 MtrunA17_Chr3g0141801 23.810 462 299 13 23 464 33 461 5.51e-23 102
Msa1335560 MtrunA17_Chr8g0381541 23.632 457 294 16 31 464 43 467 1.09e-22 100
Msa1335560 MtrunA17_Chr8g0339861 24.033 491 302 19 7 464 12 464 2.96e-22 99.8
Msa1335560 MtrunA17_Chr5g0431631 41.593 113 64 2 30 140 49 161 2.98e-22 93.6
Msa1335560 MtrunA17_Chr5g0445361 37.879 132 74 2 368 491 8 139 4.23e-22 92.4
Msa1335560 MtrunA17_Chr8g0381571 23.982 442 281 16 31 449 43 452 5.37e-22 99.0
Msa1335560 MtrunA17_Chr8g0372591 33.898 118 78 0 298 415 3 120 2.81e-21 90.1
Msa1335560 MtrunA17_Chr2g0280051 28.736 261 169 8 1 254 44 294 3.17e-21 94.7
Msa1335560 MtrunA17_Chr5g0396521 23.925 535 319 20 20 489 57 568 1.17e-20 95.1
Msa1335560 MtrunA17_Chr8g0387001 23.094 446 290 12 34 441 29 459 1.59e-20 94.7
Msa1335560 MtrunA17_Chr7g0248991 25.402 311 212 7 120 420 55 355 2.30e-20 92.8
Msa1335560 MtrunA17_Chr4g0030761 37.241 145 56 4 349 475 1 128 3.70e-20 87.0
Msa1335560 MtrunA17_Chr3g0107561 25.000 276 190 6 4 267 18 288 5.74e-20 90.9
Msa1335560 MtrunA17_Chr3g0078411 22.661 481 318 15 3 466 2 445 6.90e-20 92.4
Msa1335560 MtrunA17_Chr1g0176851 27.917 240 161 6 118 352 2 234 9.76e-20 88.2
Msa1335560 MtrunA17_Chr8g0369791 23.029 482 312 15 1 464 3 443 9.86e-20 91.7
Msa1335560 MtrunA17_Chr8g0354531 25.231 432 273 15 50 459 214 617 1.03e-19 92.4
Msa1335560 MtrunA17_Chr7g0262111 23.282 451 304 12 34 459 44 477 1.31e-19 91.7
Msa1335560 MtrunA17_Chr6g0455461 22.500 480 320 15 3 466 2 445 1.53e-19 91.3
Msa1335560 MtrunA17_Chr3g0117321 41.026 117 69 0 33 149 9 125 1.89e-19 84.3
Msa1335560 MtrunA17_Chr4g0063221 23.239 426 275 12 55 454 87 486 2.71e-19 90.9
Msa1335560 MtrunA17_Chr8g0351311 23.433 367 253 10 120 465 130 489 4.01e-19 90.1
Msa1335560 MtrunA17_Chr5g0408181 23.319 476 309 15 1 462 6 439 1.17e-18 88.6
Msa1335560 MtrunA17_Chr3g0105751 25.097 259 178 6 12 260 27 279 1.22e-18 87.8
Msa1335560 MtrunA17_Chr4g0044851 21.798 445 300 12 31 462 37 446 1.26e-18 88.6
Msa1335560 MtrunA17_Chr1g0151221 24.901 253 178 5 244 489 277 524 1.57e-18 88.6
Msa1335560 MtrunA17_Chr8g0351401 24.116 481 305 20 15 459 25 481 1.67e-18 88.2
Msa1335560 MtrunA17_Chr1g0204271 24.528 371 246 14 120 466 124 484 3.68e-18 87.4
Msa1335560 MtrunA17_Chr1g0193811 23.641 423 284 14 55 458 85 487 7.64e-18 86.3
Msa1335560 MtrunA17_Chr8g0380471 25.071 351 238 12 120 465 125 455 1.15e-17 85.5
Msa1335560 MtrunA17_Chr5g0400411 22.637 455 307 14 27 464 41 467 1.62e-17 85.1
Msa1335560 MtrunA17_Chr2g0280001 31.868 182 114 5 1 175 34 212 1.89e-17 81.3
Msa1335560 MtrunA17_Chr4g0056981 47.222 72 38 0 324 395 1 72 2.63e-17 76.3
Msa1335560 MtrunA17_Chr8g0354511 23.690 439 294 15 41 459 79 496 3.13e-17 84.3
Msa1335560 MtrunA17_Chr6g0478161 21.918 511 327 18 3 482 18 487 3.56e-17 84.3
Msa1335560 MtrunA17_Chr2g0313771 23.596 445 294 16 39 459 73 495 5.38e-17 83.6
Msa1335560 MtrunA17_Chr2g0313821 22.196 428 287 14 55 459 84 488 5.95e-17 83.6
Msa1335560 MtrunA17_Chr7g0215181 20.764 419 294 11 55 458 85 480 6.66e-17 83.2
Msa1335560 MtrunA17_Chr6g0449361 25.595 336 220 11 140 448 132 464 6.96e-17 83.2
Msa1335560 MtrunA17_Chr8g0372711 24.416 471 309 17 5 458 16 456 7.36e-17 83.2
Msa1335560 MtrunA17_Chr6g0449351 26.384 307 186 10 169 448 131 424 7.38e-17 83.2
Msa1335560 MtrunA17_Chr5g0443731 24.672 458 295 19 25 463 23 449 1.12e-16 82.4
Msa1335560 MtrunA17_Chr3g0104351 22.741 343 239 6 120 441 133 470 1.61e-16 82.4
Msa1335560 MtrunA17_Chr1g0179811 23.077 455 292 14 61 483 107 535 1.94e-16 82.0
Msa1335560 MtrunA17_Chr4g0076171 30.978 184 90 6 314 482 1 162 3.24e-16 76.6
Msa1335560 MtrunA17_Chr3g0128461 22.535 426 281 16 55 456 93 493 3.49e-16 81.3
Msa1335560 MtrunA17_Chr4g0004481 26.298 289 192 10 168 441 164 446 3.53e-16 80.9
Msa1335560 MtrunA17_Chr6g0449381 27.551 294 187 9 169 441 171 459 4.03e-16 80.9
Msa1335560 MtrunA17_Chr2g0313791 22.824 425 271 16 61 459 90 483 5.78e-16 80.5
Msa1335560 MtrunA17_Chr5g0397971 22.444 450 296 15 31 461 31 446 5.81e-16 80.5
Msa1335560 MtrunA17_Chr2g0313831 24.413 426 272 15 56 456 85 485 6.24e-16 80.5
Msa1335560 MtrunA17_Chr2g0286091 23.333 480 305 20 21 469 34 481 6.35e-16 80.5
Msa1335560 MtrunA17_Chr8g0348751 22.946 353 229 9 120 441 124 464 8.67e-16 80.1
Msa1335560 MtrunA17_Chr2g0313781 23.288 438 270 18 61 459 90 500 1.10e-15 79.7
Msa1335560 MtrunA17_Chr7g0219961 21.458 480 320 17 5 466 4 444 1.41e-15 79.0
Msa1335560 MtrunA17_Chr4g0038271 23.514 387 245 14 97 441 137 514 1.89e-15 79.0
Msa1335560 MtrunA17_Chr8g0334941 25.000 232 155 5 241 457 71 298 2.34e-15 77.4
Msa1335560 MtrunA17_Chr1g0164371 22.574 474 307 15 8 462 20 452 2.97e-15 78.2
Msa1335560 MtrunA17_Chr8g0334891 24.569 232 156 5 241 457 226 453 7.23e-15 77.0
Msa1335560 MtrunA17_Chr6g0449341 23.596 356 230 12 120 441 170 517 9.27e-15 77.0
Msa1335560 MtrunA17_Chr3g0089351 26.667 195 136 5 271 461 179 370 1.49e-14 75.5
Msa1335560 MtrunA17_Chr4g0044841 21.569 459 284 12 31 462 38 447 2.09e-14 75.5
Msa1335560 MtrunA17_Chr3g0089361 25.346 217 157 3 248 461 238 452 2.17e-14 75.5
Msa1335560 MtrunA17_Chr5g0429651 25.112 223 146 4 238 441 242 462 2.74e-14 75.1
Msa1335560 MtrunA17_Chr1g0153371 22.581 496 303 17 1 464 1 447 3.01e-14 75.1
Msa1335560 MtrunA17_Chr1g0203141 25.991 227 155 7 244 459 263 487 3.93e-14 74.7
Msa1335560 MtrunA17_Chr6g0457421 22.066 426 280 16 55 458 83 478 4.53e-14 74.7
Msa1335560 MtrunA17_Chr5g0431601 40.000 80 47 1 68 147 3 81 5.15e-14 67.4
Msa1335560 MtrunA17_Chr5g0443401 21.333 450 298 14 29 458 36 449 5.55e-14 74.3
Msa1335560 MtrunA17_Chr8g0371761 28.767 146 85 2 317 443 1 146 7.40e-14 68.9
Msa1335560 MtrunA17_Chr4g0067191 18.136 397 260 9 120 466 113 494 2.07e-13 72.4
Msa1335560 MtrunA17_Chr1g0163501 23.048 538 315 25 10 495 5 495 2.72e-13 72.0
Msa1335560 MtrunA17_Chr7g0227291 25.000 288 197 9 168 441 166 448 4.00e-13 71.6
Msa1335560 MtrunA17_Chr1g0154731 20.388 412 304 9 54 458 80 474 5.95e-13 70.9
Msa1335560 MtrunA17_Chr5g0445541 37.255 102 61 2 3 102 11 111 7.57e-13 65.9
Msa1335560 MtrunA17_Chr5g0445341 40.741 81 47 1 68 147 3 83 1.21e-12 63.5
Msa1335560 MtrunA17_Chr5g0430051 38.679 106 58 2 11 109 11 116 1.39e-12 64.3
Msa1335560 MtrunA17_Chr3g0107501 21.341 492 327 17 22 488 24 480 1.70e-12 69.3
Msa1335560 MtrunA17_Chr2g0310361 30.612 147 84 5 160 297 2 139 2.54e-12 64.7
Msa1335560 MtrunA17_Chr3g0113321 25.000 220 143 5 260 466 239 449 5.47e-12 67.8
Msa1335560 MtrunA17_Chr6g0479681 25.101 247 148 10 244 459 261 501 6.03e-12 67.8
Msa1335560 MtrunA17_Chr3g0116721 27.551 196 124 7 139 324 3 190 7.60e-12 64.3
Msa1335560 MtrunA17_Chr4g0004601 20.096 418 299 14 55 456 102 500 7.94e-12 67.4
Msa1335560 MtrunA17_Chr4g0014051 23.434 431 278 15 51 456 94 497 1.15e-11 67.0
Msa1335560 MtrunA17_Chr4g0026941 23.224 366 250 12 120 462 156 513 1.48e-11 66.6
Msa1335560 MtrunA17_Chr6g0458571 39.583 96 48 4 14 99 30 125 2.08e-11 61.6
Msa1335560 MtrunA17_Chr5g0404861 28.671 143 95 3 345 484 18 156 3.21e-11 62.0
Msa1335560 MtrunA17_Chr1g0163421 21.883 393 241 14 142 495 171 536 3.32e-11 65.5
Msa1335560 MtrunA17_Chr6g0463541 31.000 100 67 1 379 478 3 100 3.69e-11 60.1
Msa1335560 MtrunA17_Chr6g0484771 25.000 124 92 1 67 190 2 124 4.06e-11 61.2
Msa1335560 MtrunA17_Chr5g0446131 21.053 361 248 11 120 459 142 486 4.48e-11 65.1
Msa1335560 MtrunA17_Chr1g0184421 20.133 452 281 13 35 441 40 456 4.58e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1335560 AT4G37370.1 55.464 485 208 5 8 489 7 486 0.0 567
Msa1335560 AT4G37340.1 57.645 484 194 7 13 489 10 489 0.0 565
Msa1335560 AT4G37330.1 55.738 488 201 6 6 489 9 485 0.0 563
Msa1335560 AT5G36220.1 55.102 490 206 6 7 489 12 494 0.0 556
Msa1335560 AT4G37320.1 53.196 485 220 4 8 489 8 488 0.0 548
Msa1335560 AT4G37360.1 54.990 491 206 7 3 489 9 488 0.0 540
Msa1335560 AT3G28740.1 58.405 464 185 5 30 489 38 497 0.0 537
Msa1335560 AT5G57220.1 52.772 487 223 5 4 489 3 483 0.0 535
Msa1335560 AT2G23190.1 52.130 493 227 5 1 489 45 532 0.0 530
Msa1335560 AT4G37430.1 50.806 496 229 7 4 489 2 492 0.0 524
Msa1335560 AT4G37400.1 51.822 494 223 7 4 489 3 489 0.0 520
Msa1335560 AT2G23220.1 52.738 493 225 5 1 489 16 504 4.34e-179 513
Msa1335560 AT4G37410.1 49.293 495 240 8 5 493 4 493 7.69e-174 499
Msa1335560 AT4G37310.1 49.398 498 238 8 6 490 5 501 1.72e-168 486
Msa1335560 AT5G67310.1 47.454 491 239 7 4 487 19 497 1.69e-160 465
Msa1335560 AT1G66540.1 58.158 380 150 5 114 489 1 375 1.11e-159 458
Msa1335560 AT5G36220.2 57.585 323 133 2 167 489 30 348 5.08e-137 400
Msa1335560 AT1G66540.2 59.748 318 121 4 174 489 4 316 1.42e-135 395
Msa1335560 AT5G10600.1 42.062 485 269 6 11 487 24 504 2.11e-132 394
Msa1335560 AT5G10610.1 40.657 487 274 6 11 487 7 488 3.61e-125 375
Msa1335560 AT5G07990.1 35.409 514 305 6 1 494 1 507 2.04e-108 332
Msa1335560 AT4G31940.1 36.364 517 301 8 1 489 1 517 8.71e-103 318
Msa1335560 AT4G31970.1 35.271 516 307 8 1 489 1 516 2.80e-101 314
Msa1335560 AT5G06900.1 37.271 491 284 11 5 482 6 485 8.60e-101 312
Msa1335560 AT4G12300.1 37.100 469 277 6 30 485 41 504 2.44e-97 303
Msa1335560 AT3G25180.1 36.089 496 292 10 2 478 6 495 2.42e-94 296
Msa1335560 AT4G12320.1 35.944 498 297 7 3 485 16 506 2.93e-94 296
Msa1335560 AT1G74550.1 33.932 501 295 12 6 491 3 482 6.07e-92 289
Msa1335560 AT3G26280.1 36.000 500 286 10 11 489 15 501 2.75e-91 288
Msa1335560 AT3G26280.2 36.000 500 286 10 11 489 32 518 3.18e-91 288
Msa1335560 AT2G40890.1 30.891 505 330 7 3 494 2 500 1.93e-90 285
Msa1335560 AT4G12330.1 36.147 462 277 7 40 489 55 510 3.11e-90 285
Msa1335560 AT5G44620.1 35.743 498 303 5 4 489 19 511 2.23e-89 283
Msa1335560 AT4G31950.1 34.623 517 298 9 1 489 1 505 2.46e-89 283
Msa1335560 AT4G13310.1 35.294 476 287 9 24 485 25 493 1.58e-88 280
Msa1335560 AT3G26310.1 32.735 501 314 8 5 489 3 496 9.76e-88 278
Msa1335560 AT3G26300.1 33.537 492 303 9 8 482 6 490 1.06e-87 278
Msa1335560 AT5G25120.1 33.803 497 305 8 1 483 1 487 5.15e-87 276
Msa1335560 AT3G48280.1 33.602 497 301 11 6 486 2 485 5.04e-86 273
Msa1335560 AT2G45550.1 33.201 503 313 7 8 493 15 511 6.31e-86 274
Msa1335560 AT1G01280.1 34.904 467 283 8 40 489 41 503 8.28e-86 273
Msa1335560 AT4G13290.1 34.615 468 281 9 30 485 32 486 9.56e-86 273
Msa1335560 AT2G45560.1 33.598 503 303 8 7 485 8 503 1.09e-85 273
Msa1335560 AT3G26230.1 34.252 508 301 10 6 490 1 498 2.35e-85 272
Msa1335560 AT2G45570.1 36.095 507 292 10 4 485 5 504 2.53e-85 272
Msa1335560 AT3G26270.1 33.958 480 291 8 29 490 30 501 2.93e-85 272
Msa1335560 AT2G25160.1 33.531 507 305 10 4 484 7 507 6.87e-84 269
Msa1335560 AT1G74540.1 33.134 501 295 11 8 493 5 480 4.57e-83 266
Msa1335560 AT4G12310.1 34.989 463 277 8 40 485 53 508 7.35e-83 266
Msa1335560 AT1G13080.1 34.731 501 302 14 8 490 9 502 1.61e-82 265
Msa1335560 AT3G48310.1 33.263 472 288 10 27 485 28 485 1.05e-81 262
Msa1335560 AT3G26160.1 33.725 510 304 14 6 491 3 502 1.14e-81 262
Msa1335560 AT5G25140.1 32.797 497 310 9 1 483 1 487 1.49e-81 262
Msa1335560 AT5G25130.1 32.480 508 297 10 1 483 1 487 1.57e-81 262
Msa1335560 AT3G20940.1 32.661 496 302 13 20 492 28 514 1.99e-81 262
Msa1335560 AT2G24180.1 32.990 485 293 8 26 497 31 496 2.27e-81 262
Msa1335560 AT3G48270.1 31.992 472 296 10 27 486 27 485 2.30e-81 261
Msa1335560 AT4G31500.1 33.742 489 291 12 14 479 10 488 3.74e-81 261
Msa1335560 AT3G48290.1 33.403 479 293 10 20 485 21 486 5.13e-81 260
Msa1335560 AT5G25180.1 32.193 497 313 9 1 483 1 487 1.21e-80 259
Msa1335560 AT2G42250.1 32.587 491 302 9 7 476 15 497 2.04e-80 259
Msa1335560 AT1G13110.1 32.353 510 309 14 5 490 7 504 2.92e-80 259
Msa1335560 AT3G20950.1 34.394 503 287 16 2 476 11 498 6.01e-80 259
Msa1335560 AT5G57260.1 33.403 479 293 8 23 482 22 493 1.02e-79 257
Msa1335560 AT3G26320.1 33.262 466 289 8 32 482 32 490 2.75e-79 256
Msa1335560 AT3G48300.1 32.974 464 285 10 23 476 22 469 8.07e-79 254
Msa1335560 AT3G48300.2 32.974 464 285 10 23 476 24 471 8.51e-79 254
Msa1335560 AT3G26330.1 32.415 472 297 7 26 482 26 490 3.37e-78 253
Msa1335560 AT3G61040.1 34.136 457 286 5 32 478 34 485 5.68e-78 253
Msa1335560 AT3G26180.1 32.277 505 305 13 6 483 1 495 1.00e-77 252
Msa1335560 AT3G26200.1 35.319 470 282 9 31 483 28 492 1.07e-77 252
Msa1335560 AT3G26170.1 31.683 505 306 13 6 483 3 495 1.67e-77 251
Msa1335560 AT4G22710.1 32.823 457 291 8 40 485 62 513 2.61e-77 252
Msa1335560 AT3G26290.1 33.333 465 288 7 33 482 33 490 4.30e-77 250
Msa1335560 AT3G26290.2 33.333 465 288 7 33 482 46 503 5.49e-77 251
Msa1335560 AT3G48290.2 31.881 505 292 11 20 485 21 512 1.86e-76 249
Msa1335560 AT1G33720.1 31.827 509 318 7 8 493 9 511 3.03e-76 248
Msa1335560 AT4G22690.1 32.604 457 292 8 40 485 93 544 3.22e-76 250
Msa1335560 AT1G50520.1 32.974 464 282 12 40 484 52 505 4.27e-75 246
Msa1335560 AT3G26220.1 34.722 504 302 10 8 490 4 501 1.64e-74 244
Msa1335560 AT5G06905.1 31.161 491 297 11 5 464 3 483 1.66e-74 244
Msa1335560 AT1G13090.2 33.262 466 286 9 31 482 28 482 2.73e-74 243
Msa1335560 AT2G30770.1 31.197 468 301 9 30 484 32 491 8.71e-74 242
Msa1335560 AT3G20110.1 32.292 480 298 11 12 476 17 484 1.32e-73 241
Msa1335560 AT3G26190.1 32.914 477 284 10 31 483 28 492 2.64e-73 241
Msa1335560 AT5G04330.1 30.533 488 301 9 28 489 29 504 4.21e-73 240
Msa1335560 AT3G26150.1 31.673 502 310 12 6 483 3 495 4.57e-73 240
Msa1335560 AT4G15330.1 30.063 479 304 9 13 473 20 485 1.48e-72 239
Msa1335560 AT4G36220.1 30.435 483 291 9 38 489 47 515 2.46e-72 238
Msa1335560 AT3G48320.1 31.000 500 317 10 1 486 1 486 2.50e-72 238
Msa1335560 AT3G53280.1 33.970 471 285 10 31 483 28 490 3.08e-72 238
Msa1335560 AT3G26210.1 33.191 470 291 8 38 490 38 501 5.17e-72 237
Msa1335560 AT3G32047.1 31.818 462 286 12 42 486 53 502 1.12e-71 236
Msa1335560 AT1G11610.2 30.271 479 312 9 24 489 27 496 1.19e-71 236
Msa1335560 AT3G52970.1 32.087 508 307 12 8 485 10 509 1.27e-71 236
Msa1335560 AT3G20140.1 31.568 472 299 10 20 476 28 490 1.43e-71 236
Msa1335560 AT3G44250.1 34.255 470 284 10 31 482 28 490 1.18e-70 233
Msa1335560 AT4G15360.1 29.435 513 325 13 4 498 11 504 2.25e-70 234
Msa1335560 AT1G11610.1 30.802 474 306 9 24 484 27 491 2.87e-70 233
Msa1335560 AT4G13770.1 30.924 498 309 14 6 483 11 493 3.31e-70 233
Msa1335560 AT2G30750.1 31.733 479 306 8 19 484 21 491 7.11e-70 231
Msa1335560 AT5G24950.1 31.557 469 295 12 30 482 31 489 8.04e-70 231
Msa1335560 AT5G47990.1 33.043 460 281 10 42 484 53 502 1.25e-69 231
Msa1335560 AT4G15350.1 32.747 455 275 13 42 476 45 488 1.86e-69 231
Msa1335560 AT3G52970.2 31.407 519 310 13 8 485 10 523 2.04e-69 231
Msa1335560 AT3G20130.1 30.573 471 293 11 42 491 53 510 2.62e-69 230
Msa1335560 AT2G02580.1 32.596 497 310 9 2 482 3 490 6.35e-69 229
Msa1335560 AT2G45580.1 32.120 467 288 8 41 488 48 504 6.53e-69 229
Msa1335560 AT3G20100.1 32.222 450 281 9 40 473 50 491 2.07e-68 228
Msa1335560 AT3G20090.2 31.626 449 280 10 42 473 54 492 3.22e-68 228
Msa1335560 AT2G14100.1 33.129 489 295 15 8 476 18 494 5.49e-68 227
Msa1335560 AT3G20080.2 31.866 477 294 13 30 488 41 504 1.69e-67 226
Msa1335560 AT3G20080.1 31.866 477 294 13 30 488 41 504 1.69e-67 226
Msa1335560 AT5G42580.1 31.788 453 274 11 52 489 61 493 7.19e-67 224
Msa1335560 AT4G13310.2 35.310 371 228 6 24 389 25 388 1.07e-66 220
Msa1335560 AT3G20120.4 31.602 462 285 11 42 484 52 501 1.24e-66 223
Msa1335560 AT5G42590.1 32.252 493 308 10 8 482 6 490 3.49e-66 222
Msa1335560 AT5G05260.2 29.116 498 317 13 8 472 11 505 4.20e-65 219
Msa1335560 AT1G13710.1 35.233 386 226 10 117 488 134 509 8.61e-65 219
Msa1335560 AT2G46660.1 30.722 485 298 13 25 495 64 524 1.39e-64 218
Msa1335560 AT2G30490.1 31.633 490 300 10 7 473 9 486 2.48e-64 217
Msa1335560 AT3G26830.1 29.472 492 321 10 1 479 1 479 2.82e-64 216
Msa1335560 AT5G24960.1 31.809 481 301 11 19 482 20 490 5.36e-64 216
Msa1335560 AT1G50560.1 32.906 468 284 13 42 489 54 511 1.55e-63 215
Msa1335560 AT4G15330.2 28.392 479 284 10 13 473 20 457 4.29e-63 213
Msa1335560 AT4G39950.1 29.283 502 314 13 2 471 22 514 5.60e-63 214
Msa1335560 AT4G39950.2 29.283 502 314 13 2 471 62 554 1.32e-62 214
Msa1335560 AT3G61880.1 31.224 490 302 13 21 495 56 525 2.81e-62 212
Msa1335560 AT3G61880.2 31.224 490 302 13 21 495 56 525 4.62e-62 212
Msa1335560 AT1G01190.2 30.973 452 281 11 22 458 69 504 6.53e-62 211
Msa1335560 AT1G01190.1 30.973 452 281 11 22 458 64 499 6.67e-62 211
Msa1335560 AT4G15380.1 31.140 456 269 14 58 494 70 499 8.84e-62 211
Msa1335560 AT2G27000.1 31.049 467 289 11 42 492 50 499 1.35e-61 210
Msa1335560 AT3G20130.2 30.641 421 259 10 91 491 75 482 1.61e-61 209
Msa1335560 AT5G09970.1 30.350 514 312 15 5 492 35 528 1.81e-61 210
Msa1335560 AT2G22330.1 29.039 489 318 12 7 471 33 516 2.37e-61 210
Msa1335560 AT2G22330.2 29.039 489 318 12 7 471 56 539 4.18e-61 210
Msa1335560 AT1G28430.1 29.389 507 327 9 1 492 10 500 1.12e-60 207
Msa1335560 AT5G05260.1 28.659 492 295 12 8 472 11 473 1.30e-60 207
Msa1335560 AT3G25180.2 34.646 381 229 8 2 368 6 380 2.36e-60 204
Msa1335560 AT1G58260.1 27.655 499 332 11 2 473 8 504 4.35e-60 206
Msa1335560 AT3G20960.2 29.748 437 282 10 56 476 67 494 7.31e-60 206
Msa1335560 AT1G74110.1 30.561 517 316 15 1 488 31 533 1.98e-59 205
Msa1335560 AT1G33730.1 34.232 371 216 8 133 484 5 366 3.76e-59 199
Msa1335560 AT1G33730.2 34.232 371 216 8 133 484 5 366 3.76e-59 199
Msa1335560 AT1G13100.1 29.386 456 293 13 41 477 38 483 1.33e-58 201
Msa1335560 AT3G53300.1 30.233 473 306 11 29 483 26 492 3.60e-58 201
Msa1335560 AT1G79370.1 29.273 509 314 15 3 472 15 516 6.82e-58 201
Msa1335560 AT1G16410.1 28.571 483 315 9 4 459 18 497 4.51e-57 198
Msa1335560 AT5G35715.1 29.148 446 292 12 68 495 3 442 1.02e-56 195
Msa1335560 AT2G45580.2 34.540 359 212 7 152 491 1 355 4.28e-56 191
Msa1335560 AT1G16400.1 28.205 468 296 11 24 459 37 496 4.42e-56 196
Msa1335560 AT5G04630.1 27.734 512 331 10 4 489 10 508 5.56e-56 195
Msa1335560 AT2G25160.2 32.152 395 245 8 4 381 7 395 1.23e-55 192
Msa1335560 AT1G33720.4 31.771 384 240 5 126 493 2 379 1.74e-55 190
Msa1335560 AT1G33720.3 31.771 384 240 5 126 493 2 379 1.74e-55 190
Msa1335560 AT1G33720.5 31.771 384 240 5 126 493 2 379 1.74e-55 190
Msa1335560 AT4G20240.1 30.612 392 254 8 31 415 33 413 5.90e-55 191
Msa1335560 AT3G10560.1 28.423 482 309 12 30 489 45 512 3.98e-54 190
Msa1335560 AT3G20120.2 32.361 377 225 10 126 484 1 365 6.68e-54 186
Msa1335560 AT3G20120.3 32.361 377 225 10 126 484 1 365 6.68e-54 186
Msa1335560 AT3G20120.1 32.361 377 225 10 126 484 1 365 6.68e-54 186
Msa1335560 AT2G05180.1 30.500 400 257 9 42 429 52 442 8.76e-54 187
Msa1335560 AT3G20960.1 30.729 384 241 10 109 476 17 391 9.16e-54 187
Msa1335560 AT5G04660.1 29.492 512 321 12 3 489 15 511 1.97e-53 188
Msa1335560 AT3G20090.1 32.231 363 222 9 126 473 1 354 1.80e-52 182
Msa1335560 AT1G64940.1 27.413 518 337 11 1 489 1 508 2.20e-52 185
Msa1335560 AT1G13080.2 32.884 371 225 13 138 490 20 384 4.12e-52 181
Msa1335560 AT3G20935.1 34.568 324 158 10 194 473 4 317 5.99e-52 180
Msa1335560 AT1G33720.2 30.562 409 237 8 126 493 2 404 7.90e-52 181
Msa1335560 AT2G27010.1 30.847 496 280 13 20 493 24 478 2.31e-51 182
Msa1335560 AT3G61040.2 31.667 360 239 3 32 389 34 388 3.24e-50 177
Msa1335560 AT5G25900.1 27.941 476 325 10 27 489 37 507 2.93e-49 177
Msa1335560 AT3G20080.4 36.122 263 148 7 241 488 110 367 9.77e-49 172
Msa1335560 AT3G20080.5 36.122 263 148 7 241 488 110 367 9.77e-49 172
Msa1335560 AT3G20080.6 36.122 263 148 7 241 488 110 367 9.77e-49 172
Msa1335560 AT3G20080.3 36.122 263 148 7 241 488 110 367 9.77e-49 172
Msa1335560 AT1G64930.1 27.642 492 308 14 31 489 32 508 2.04e-48 174
Msa1335560 AT2G12190.1 27.959 490 310 12 31 489 32 509 3.83e-48 174
Msa1335560 AT1G11600.1 28.626 524 308 19 8 489 10 509 3.50e-47 171
Msa1335560 AT5G35917.1 27.409 467 276 13 30 473 41 467 8.75e-47 170
Msa1335560 AT1G64950.1 26.434 488 318 10 31 489 32 507 1.17e-46 170
Msa1335560 AT4G20240.2 30.137 365 238 7 31 389 33 386 1.28e-46 167
Msa1335560 AT3G10570.1 27.938 451 295 10 58 489 73 512 3.76e-45 166
Msa1335560 AT5G24960.2 31.398 379 242 8 19 389 20 388 3.77e-45 163
Msa1335560 AT5G61320.1 28.627 517 311 14 1 489 1 487 2.29e-44 163
Msa1335560 AT1G16410.2 28.713 404 260 10 4 386 18 414 2.50e-44 161
Msa1335560 AT2G45580.3 30.278 360 233 5 41 389 48 400 1.36e-42 156
Msa1335560 AT3G26180.2 36.111 252 144 6 248 483 111 361 2.77e-42 154
Msa1335560 AT3G26180.2 35.577 104 63 1 11 110 6 109 4.22e-12 68.2
Msa1335560 AT3G03470.1 26.275 510 339 9 2 484 5 504 3.79e-42 157
Msa1335560 AT1G64900.1 26.458 480 311 11 38 489 38 503 3.20e-38 146
Msa1335560 AT3G53290.1 28.777 417 264 11 85 490 12 406 4.47e-36 139
Msa1335560 AT1G13090.1 28.571 280 180 6 31 299 28 298 5.49e-27 110
Msa1335560 AT2G26170.1 23.016 504 341 14 12 483 27 515 3.01e-25 109
Msa1335560 AT1G19630.1 28.251 223 151 4 249 464 232 452 3.64e-24 105
Msa1335560 AT1G31800.1 25.053 475 302 16 50 497 131 578 4.81e-24 106
Msa1335560 AT2G45560.2 25.817 306 193 7 7 290 8 301 9.41e-24 102
Msa1335560 AT2G26710.1 25.458 491 304 15 6 456 16 484 4.86e-23 102
Msa1335560 AT1G19630.3 28.182 220 149 4 249 461 232 449 9.05e-23 101
Msa1335560 AT2G26170.2 27.092 251 167 5 248 483 183 432 5.72e-21 95.9
Msa1335560 AT1G05160.2 25.330 454 289 17 31 464 45 468 7.70e-21 95.9
Msa1335560 AT1G05160.1 25.330 454 289 17 31 464 45 468 7.70e-21 95.9
Msa1335560 AT2G45560.3 26.749 243 154 6 7 236 8 239 1.01e-20 91.7
Msa1335560 AT3G14640.1 24.242 429 275 17 51 456 82 483 3.31e-20 94.0
Msa1335560 AT5G38970.1 23.651 482 307 19 6 466 5 446 3.96e-20 93.6
Msa1335560 AT4G27710.1 23.266 447 297 18 55 476 87 512 4.11e-20 93.6
Msa1335560 AT3G14640.2 24.242 429 275 17 51 456 104 505 5.20e-20 93.6
Msa1335560 AT4G15110.1 23.913 506 294 19 49 489 97 576 1.82e-19 92.0
Msa1335560 AT5G45340.1 23.629 474 300 17 6 462 10 438 5.36e-19 90.1
Msa1335560 AT2G45510.1 23.433 367 252 11 120 463 123 483 6.63e-19 90.1
Msa1335560 AT3G30180.1 22.869 481 309 16 6 466 8 446 6.86e-19 89.7
Msa1335560 AT1G75130.1 24.123 456 311 16 17 459 42 475 7.36e-19 89.7
Msa1335560 AT1G73340.1 23.800 500 323 16 2 482 17 477 8.48e-19 89.7
Msa1335560 AT3G14630.1 24.941 421 276 15 53 456 80 477 1.14e-18 89.4
Msa1335560 AT4G20235.1 27.660 282 160 8 8 277 3 252 1.26e-18 87.4
Msa1335560 AT2G32440.2 24.160 476 295 19 4 449 11 450 1.40e-18 89.0
Msa1335560 AT2G32440.1 24.160 476 295 19 4 449 11 450 1.40e-18 89.0
Msa1335560 AT3G14630.2 24.941 421 276 15 53 456 135 532 1.45e-18 89.4
Msa1335560 AT3G14610.1 22.947 414 277 15 62 456 91 481 1.51e-18 89.0
Msa1335560 AT1G12740.1 22.851 477 310 14 8 461 5 446 1.54e-18 88.6
Msa1335560 AT5G38970.2 27.679 224 149 6 251 466 147 365 2.38e-18 87.4
Msa1335560 AT5G38970.4 27.679 224 149 6 251 466 147 365 2.38e-18 87.4
Msa1335560 AT2G42850.1 25.316 237 164 6 242 468 233 466 2.39e-18 88.2
Msa1335560 AT2G29090.2 23.937 447 294 11 31 465 49 461 2.47e-18 88.2
Msa1335560 AT2G29090.1 23.937 447 294 11 31 465 49 461 2.47e-18 88.2
Msa1335560 AT4G19230.1 22.774 483 305 18 1 462 3 438 2.62e-18 87.8
Msa1335560 AT3G19270.2 23.043 460 299 12 24 465 23 445 3.67e-18 87.4
Msa1335560 AT2G44890.1 22.554 368 254 9 120 463 123 483 4.17e-18 87.4
Msa1335560 AT4G39490.1 21.731 543 330 17 9 488 9 519 5.56e-18 87.0
Msa1335560 AT1G63710.1 22.034 472 302 12 14 441 12 461 6.32e-18 87.0
Msa1335560 AT2G44890.2 22.284 359 248 8 120 463 123 465 1.20e-17 85.9
Msa1335560 AT5G58860.1 21.351 459 304 11 21 441 23 462 1.24e-17 86.3
Msa1335560 AT1G12740.2 24.342 304 205 9 177 461 155 452 1.34e-17 85.9
Msa1335560 AT4G19230.2 22.656 512 322 19 1 491 3 461 2.82e-17 84.7
Msa1335560 AT5G23190.1 23.822 382 238 13 123 467 155 520 3.23e-17 85.1
Msa1335560 AT5G45340.2 23.195 457 293 15 6 447 10 423 3.66e-17 84.3
Msa1335560 AT3G53130.1 22.757 457 291 15 61 483 107 535 5.43e-17 84.3
Msa1335560 AT2G46950.1 22.947 414 279 13 61 456 148 539 6.94e-17 84.0
Msa1335560 AT1G11680.1 26.638 229 154 5 241 457 229 455 7.32e-17 83.6
Msa1335560 AT4G39510.1 25.857 321 212 10 169 467 169 485 8.41e-17 83.6
Msa1335560 AT1G12740.4 22.614 482 311 15 8 461 5 452 1.16e-16 82.8
Msa1335560 AT2G34490.1 22.047 508 345 21 1 488 11 487 1.30e-16 82.8
Msa1335560 AT5G35920.1 33.858 127 74 3 355 472 6 131 1.37e-16 77.4
Msa1335560 AT2G28850.1 25.926 216 142 8 267 469 259 469 1.38e-16 82.8
Msa1335560 AT2G28860.1 25.701 214 141 8 267 467 259 467 2.08e-16 82.0
Msa1335560 AT2G45970.1 23.333 480 299 17 6 441 10 464 2.34e-16 82.0
Msa1335560 AT1G24540.1 20.417 480 313 12 34 466 42 499 3.33e-16 81.6
Msa1335560 AT3G19270.1 22.517 453 296 12 24 458 23 438 3.58e-16 81.3
Msa1335560 AT3G14650.1 22.673 419 281 16 60 459 90 484 3.80e-16 81.6
Msa1335560 AT1G57750.1 21.811 541 316 19 1 480 3 497 6.78e-16 80.5
Msa1335560 AT3G14680.1 23.317 416 282 16 60 459 90 484 7.09e-16 80.5
Msa1335560 AT2G46960.2 22.634 486 326 16 13 464 24 493 1.46e-15 79.7
Msa1335560 AT2G29090.3 27.650 217 150 4 254 465 152 366 1.49e-15 79.0
Msa1335560 AT3G53305.1 36.957 138 84 1 336 470 175 312 1.98e-15 77.8
Msa1335560 AT5G02900.1 24.609 256 177 8 246 486 226 480 9.12e-15 77.0
Msa1335560 AT1G65340.1 23.054 334 209 8 169 471 171 487 1.47e-14 76.6
Msa1335560 AT1G47620.1 26.562 256 158 9 238 467 244 495 2.09e-14 75.9
Msa1335560 AT5G05690.3 27.660 188 128 3 286 466 144 330 2.44e-14 74.7
Msa1335560 AT1G19630.2 27.273 176 119 4 249 417 232 405 3.64e-14 75.1
Msa1335560 AT5G24900.1 20.729 439 299 14 45 456 80 496 5.34e-14 74.7
Msa1335560 AT5G05690.1 27.660 188 128 3 286 466 263 449 6.12e-14 74.3
Msa1335560 AT2G46960.1 24.022 358 247 12 120 464 32 377 6.22e-14 73.9
Msa1335560 AT1G13140.1 23.796 353 229 12 120 441 135 478 9.75e-14 73.9
Msa1335560 AT4G39480.1 24.332 337 202 10 169 466 170 492 1.07e-13 73.9
Msa1335560 AT5G52400.1 25.664 226 154 7 242 457 268 489 1.49e-13 73.6
Msa1335560 AT3G26125.1 22.881 354 237 8 121 441 136 486 1.55e-13 73.6
Msa1335560 AT3G14620.1 26.222 225 155 5 242 456 261 484 2.18e-13 72.8
Msa1335560 AT5G24900.2 28.313 166 109 5 298 456 217 379 2.43e-13 72.4
Msa1335560 AT5G38450.1 21.800 500 327 15 3 456 4 485 3.33e-13 72.4
Msa1335560 AT5G24910.1 28.571 168 110 5 298 458 339 503 1.45e-12 70.5
Msa1335560 AT5G36110.1 22.467 454 294 17 30 461 33 450 1.60e-12 70.1
Msa1335560 AT5G14400.1 25.110 227 142 5 245 464 136 341 3.12e-12 68.6
Msa1335560 AT5G14400.2 25.110 227 142 5 245 464 190 395 3.48e-12 68.6
Msa1335560 AT1G13140.2 24.128 344 213 14 120 441 135 452 3.49e-12 68.9
Msa1335560 AT1G57750.2 21.598 463 270 17 1 416 3 419 1.48e-11 67.0
Msa1335560 AT3G56630.1 23.828 256 157 7 255 495 262 494 1.66e-11 67.0
Msa1335560 AT1G78490.1 21.806 454 306 14 31 466 35 457 2.67e-11 66.2
Msa1335560 AT1G34540.1 23.171 246 167 6 239 469 241 479 2.96e-11 66.2
Msa1335560 AT1G69500.1 17.917 480 327 13 34 458 27 494 6.21e-11 65.1

Find 96 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCCATCTTCATTATTTC+TGG 0.107389 tig0000496:-86296 None:intergenic
TTCATAGAGATCCAAATTTA+TGG 0.157024 tig0000496:+86528 Msa1335560:CDS
ACACTTGTCTTGAGTTTATT+AGG 0.201684 tig0000496:-84088 None:intergenic
TCATCGTTTAAATTCCTTCT+TGG 0.204603 tig0000496:+84540 Msa1335560:CDS
CCACAATGTCTTCCTATAAT+TGG 0.242812 tig0000496:+84232 Msa1335560:CDS
GTAGGATCACTCCATAAATT+TGG 0.253768 tig0000496:-86539 None:intergenic
TTCTTAACTGGAAAATATAT+TGG 0.254432 tig0000496:+84430 Msa1335560:CDS
ATTTGATCCGTATAATATTC+AGG 0.259424 tig0000496:-84976 None:intergenic
TTCTGGATGGTTTAGTAAAC+TGG 0.282055 tig0000496:-86279 None:intergenic
ATGGCCAAATCTTCTCTCTT+TGG 0.282885 tig0000496:+84314 Msa1335560:CDS
CTTATTGATGAACATCGTTT+TGG 0.284979 tig0000496:+84898 Msa1335560:CDS
TTTCATTTGGGTTGGGTAGA+AGG 0.291058 tig0000496:+86612 Msa1335560:CDS
GTAAATAAACTACTTTCATT+TGG 0.296809 tig0000496:+86599 Msa1335560:CDS
ATTAAAGAGGTTGTTAGTTT+AGG 0.303201 tig0000496:+84763 Msa1335560:CDS
GCGACATCCATTGAATATTA+AGG 0.308401 tig0000496:+86799 Msa1335560:CDS
AACCGACCTCATTTCTTAAC+TGG 0.318085 tig0000496:+84418 Msa1335560:CDS
GACAAATGAGGTACTAATAA+TGG 0.327547 tig0000496:-86434 None:intergenic
TCAAATCATCAAAGGACTTA+TGG 0.328045 tig0000496:+84993 Msa1335560:CDS
TAAATAAACTACTTTCATTT+GGG 0.347425 tig0000496:+86600 Msa1335560:CDS
TGGTGAAGGTTTCCAATTAT+AGG 0.347482 tig0000496:-84244 None:intergenic
CAAATCTTCTCTCTTTGGTT+CGG 0.362758 tig0000496:+84319 Msa1335560:CDS
CGAACCAAAGAGAGAAGATT+TGG 0.367510 tig0000496:-84318 None:intergenic
CCTTCTTTCTCAAACCTCTC+TGG 0.367941 tig0000496:-86572 None:intergenic
ATCACAACCTGAATATTATA+CGG 0.380657 tig0000496:+84969 Msa1335560:CDS
AAGGACTGTGGGATTGACTT+TGG 0.382667 tig0000496:+86661 Msa1335560:CDS
AGGACTGTGGGATTGACTTT+GGG 0.383992 tig0000496:+86662 Msa1335560:CDS
TAGACAATGCTTTGAAGATA+AGG 0.387652 tig0000496:-86383 None:intergenic
TTCATTTGGGTTGGGTAGAA+GGG 0.397318 tig0000496:+86613 Msa1335560:CDS
AAGTCAATCCCACAGTCCTT+TGG 0.405064 tig0000496:-86658 None:intergenic
AGTCAATCCCACAGTCCTTT+GGG 0.405276 tig0000496:-86657 None:intergenic
GTGTCGGGGAAAAGATACTA+TGG 0.406603 tig0000496:+84688 Msa1335560:CDS
ACTTATGAGTTGTGTAAAAC+AGG 0.409417 tig0000496:+86904 Msa1335560:three_prime_UTR
TTGTAGGTTATGTTACTTGC+GGG 0.413577 tig0000496:+86218 Msa1335560:intron
TAAACTACTTTCATTTGGGT+TGG 0.415086 tig0000496:+86604 Msa1335560:CDS
GGTGGAGTGGTTGTTTGAGT+TGG 0.419068 tig0000496:-84264 None:intergenic
AAAGAGGTTGTTAGTTTAGG+TGG 0.429478 tig0000496:+84766 Msa1335560:CDS
TTGGGTAGAAGGGCTTGTCC+TGG 0.430504 tig0000496:+86623 Msa1335560:CDS
TTAAAGGTTAATTAAGTAAG+TGG 0.440399 tig0000496:+86978 Msa1335560:three_prime_UTR
GCTAGACAACATTCTTCAAA+AGG 0.446227 tig0000496:-86942 None:intergenic
AAACTACTTTCATTTGGGTT+GGG 0.451196 tig0000496:+86605 Msa1335560:CDS
AAAACATCCTTAATATTCAA+TGG 0.453871 tig0000496:-86806 None:intergenic
CCATCTTCATTATTTCTGGA+TGG 0.458306 tig0000496:-86292 None:intergenic
GTTTAGAGAGATAATTAAAG+AGG 0.466299 tig0000496:+84750 Msa1335560:CDS
AGAGCTTCAAAGTGATGATA+AGG 0.469651 tig0000496:-84168 None:intergenic
ATTGACATGGTTGAAGCAAA+AGG 0.476643 tig0000496:+86731 Msa1335560:CDS
CAATTATAGGAAGACATTGT+GGG 0.480038 tig0000496:-84231 None:intergenic
TACGTCGAAGATTGCGCCAA+TGG 0.485304 tig0000496:-84492 None:intergenic
ACTATAATGAGAATGGTGTC+GGG 0.488291 tig0000496:+84673 Msa1335560:CDS
TACTATAATGAGAATGGTGT+CGG 0.488543 tig0000496:+84672 Msa1335560:CDS
ATAGGAAGACATTGTGGGCC+TGG 0.489671 tig0000496:-84226 None:intergenic
ATCTCTTCGTATTTCCAAGA+AGG 0.491207 tig0000496:-84554 None:intergenic
CTTTGGGCTAAGCTTTCTCC+AGG 0.494738 tig0000496:-86641 None:intergenic
TTGTGTAAAACAGGCTCATA+TGG 0.495874 tig0000496:+86913 Msa1335560:three_prime_UTR
GGTAAAACATTCTTGGGTCA+TGG 0.499836 tig0000496:-84374 None:intergenic
AATGTCATTTCCGAAAACAT+AGG 0.506246 tig0000496:-84646 None:intergenic
CATCATCCGTGACATTAGAA+TGG 0.506318 tig0000496:+86249 Msa1335560:CDS
TTGTCTTGAGTTTATTAGGA+TGG 0.508016 tig0000496:-84084 None:intergenic
GACATTGTGGGCCTGGTGGA+AGG 0.512111 tig0000496:-84219 None:intergenic
ATCATCCGTGACATTAGAAT+GGG 0.515615 tig0000496:+86250 Msa1335560:CDS
ACGGTAGCACAATCACCTTA+TGG 0.516359 tig0000496:+84466 Msa1335560:CDS
CCAATTATAGGAAGACATTG+TGG 0.520543 tig0000496:-84232 None:intergenic
ATTTAATACTATAATGAGAA+TGG 0.523047 tig0000496:+84666 Msa1335560:CDS
TGGGATATTATATCCTCCTA+AGG 0.526306 tig0000496:-86471 None:intergenic
TTGCGCCAATGGTCACCATA+AGG 0.527903 tig0000496:-84481 None:intergenic
AATCACCTTATGGTGACCAT+TGG 0.528124 tig0000496:+84476 Msa1335560:CDS
CCAGAGAGGTTTGAGAAAGA+AGG 0.530246 tig0000496:+86572 Msa1335560:CDS
CCATCCAGAAATAATGAAGA+TGG 0.533024 tig0000496:+86292 Msa1335560:CDS
GTGGTTGTTTGAGTTGGTGA+AGG 0.533074 tig0000496:-84258 None:intergenic
AGCTTAGCCCAAAGGACTGT+GGG 0.533530 tig0000496:+86650 Msa1335560:CDS
GTGTGGAATGTGTGGTGGAG+TGG 0.543011 tig0000496:-84277 None:intergenic
GAGGTTTGAGAAAGAAGGTG+AGG 0.561986 tig0000496:+86577 Msa1335560:CDS
ATACAATGATTTCACCGAAG+TGG 0.565782 tig0000496:+84615 Msa1335560:CDS
GAGCTGCTGCATGTAGTCGA+AGG 0.574808 tig0000496:-86412 None:intergenic
GTGATAAGGTGTGGAATGTG+TGG 0.590721 tig0000496:-84285 None:intergenic
TATACGGATCAAATCATCAA+AGG 0.594350 tig0000496:+84985 Msa1335560:CDS
CATAGCCCATTCTAATGTCA+CGG 0.604483 tig0000496:-86255 None:intergenic
CTGGAGAAAGCTTAGCCCAA+AGG 0.607343 tig0000496:+86642 Msa1335560:CDS
CTCTCTGGCTTAAAACATGT+AGG 0.609242 tig0000496:-86557 None:intergenic
AAATCTTCTGAAGACAAATG+AGG 0.612691 tig0000496:-86446 None:intergenic
TTGTGATGTGAGTGATGTTG+AGG 0.613710 tig0000496:+84717 Msa1335560:CDS
CATAGGTCTAAGTTCCACTT+CGG 0.615844 tig0000496:-84629 None:intergenic
TTTGTAGGTTATGTTACTTG+CGG 0.620793 tig0000496:+86217 Msa1335560:intron
AGCTGCTGCATGTAGTCGAA+GGG 0.623440 tig0000496:-86411 None:intergenic
GGAAGACATTGTGGGCCTGG+TGG 0.624439 tig0000496:-84223 None:intergenic
GGTTGAAGCAAAAGGAATCA+CGG 0.625485 tig0000496:+86739 Msa1335560:CDS
ATAAGGTGTGGAATGTGTGG+TGG 0.625825 tig0000496:-84282 None:intergenic
AAGCTTAGCCCAAAGGACTG+TGG 0.633917 tig0000496:+86649 Msa1335560:CDS
AATGAGTTGGACACTCACAT+AGG 0.637656 tig0000496:+86320 Msa1335560:CDS
TTCCAGTTAAGAAATGAGGT+CGG 0.637763 tig0000496:-84420 None:intergenic
TATTAGGATGGAATGTGAAG+TGG 0.638413 tig0000496:-84072 None:intergenic
CTATAATGAGAATGGTGTCG+GGG 0.638630 tig0000496:+84674 Msa1335560:CDS
AATCATCAAAGGACTTATGG+TGG 0.639977 tig0000496:+84996 Msa1335560:CDS
GAAGCAAAAGGAATCACGGT+GGG 0.648227 tig0000496:+86743 Msa1335560:CDS
TATTGGCTACAACAATACTA+CGG 0.652588 tig0000496:+84447 Msa1335560:CDS
TTAGGTGGAGCTAACAACGC+TGG 0.672983 tig0000496:+84781 Msa1335560:CDS
TGAAGCAAAAGGAATCACGG+TGG 0.782682 tig0000496:+86742 Msa1335560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATATAAAGAAAAATCA+TGG - tig0000496:85067-85086 None:intergenic 10.0%
!! AAAGTTTAGTTATATAAAAA+TGG + tig0000496:85804-85823 Msa1335560:intron 10.0%
!! AAGTTTAGTTATATAAAAAT+GGG + tig0000496:85805-85824 Msa1335560:intron 10.0%
!! ATTTAATACTATAATGAGAA+TGG + tig0000496:84666-84685 Msa1335560:CDS 15.0%
!!! TTTTTGTGTATTTAATTGAT+AGG + tig0000496:85435-85454 Msa1335560:intron 15.0%
!! AAATCAAATACATATTGTTT+AGG + tig0000496:85484-85503 Msa1335560:intron 15.0%
!! AATCAAATACATATTGTTTA+GGG + tig0000496:85485-85504 Msa1335560:intron 15.0%
!!! GTTTTCTATTATTACTAAAA+AGG + tig0000496:85556-85575 Msa1335560:intron 15.0%
!! AGTATTTAAATTAGAAAATG+AGG + tig0000496:85978-85997 Msa1335560:intron 15.0%
!! GTATTTAAATTAGAAAATGA+GGG + tig0000496:85979-85998 Msa1335560:intron 15.0%
!! ATCAAAATCAAATCAAAATA+AGG + tig0000496:86141-86160 Msa1335560:intron 15.0%
!! AATCAAAATAAGGTAAAATT+AGG + tig0000496:86151-86170 Msa1335560:intron 15.0%
!! TAAATAAACTACTTTCATTT+GGG + tig0000496:86600-86619 Msa1335560:CDS 15.0%
!!! ACTCATTTTTTGTTGATTAT+GGG - tig0000496:84116-84135 None:intergenic 20.0%
!!! TACTCATTTTTTGTTGATTA+TGG - tig0000496:84117-84136 None:intergenic 20.0%
!! TTCTTAACTGGAAAATATAT+TGG + tig0000496:84430-84449 Msa1335560:CDS 20.0%
!!! GTGATTTTTTAGGTTTTTTA+AGG + tig0000496:84803-84822 Msa1335560:CDS 20.0%
!!! ATTTTTTAGGTTTTTTAAGG+TGG + tig0000496:84806-84825 Msa1335560:CDS 20.0%
!!! TCCATACATTTACTTTTTAA+AGG + tig0000496:85206-85225 Msa1335560:intron 20.0%
!!! ACCTTTAAAAAGTAAATGTA+TGG - tig0000496:85210-85229 None:intergenic 20.0%
!!! GGAAAAAAATTAGTCTTATA+TGG + tig0000496:85456-85475 Msa1335560:intron 20.0%
!!! CTATTTTTGATTCACAATAT+TGG - tig0000496:85765-85784 None:intergenic 20.0%
!! AATGGGTAAAAAGTTTAATA+AGG + tig0000496:85822-85841 Msa1335560:intron 20.0%
!! TCTCTATGTAAAAATATAGA+CGG - tig0000496:85853-85872 None:intergenic 20.0%
!!! TATATTTTTACATAGAGAAG+AGG + tig0000496:85855-85874 Msa1335560:intron 20.0%
!!! ATATTTTTACATAGAGAAGA+GGG + tig0000496:85856-85875 Msa1335560:intron 20.0%
!! TTCAACTTCTCATATTAATT+AGG - tig0000496:85949-85968 None:intergenic 20.0%
!! ATATGAGAAGTTGAAAATAA+AGG + tig0000496:85954-85973 Msa1335560:intron 20.0%
!!! ATTTTGATGTGTTTGTAATT+AGG - tig0000496:86129-86148 None:intergenic 20.0%
!!! TTGTAGTGATATTGATATTT+TGG + tig0000496:86188-86207 Msa1335560:intron 20.0%
!! GTAAATAAACTACTTTCATT+TGG + tig0000496:86599-86618 Msa1335560:CDS 20.0%
!! AAAACATCCTTAATATTCAA+TGG - tig0000496:86809-86828 None:intergenic 20.0%
!!! AGCAATACTCATATTTTTAA+AGG + tig0000496:86962-86981 Msa1335560:three_prime_UTR 20.0%
!! TTAAAGGTTAATTAAGTAAG+TGG + tig0000496:86978-86997 Msa1335560:three_prime_UTR 20.0%
!!! GTTTTTGGTAAAACATTCTT+GGG - tig0000496:84383-84402 None:intergenic 25.0%
!! TATTTTCCAGTTAAGAAATG+AGG - tig0000496:84427-84446 None:intergenic 25.0%
! GTTTAGAGAGATAATTAAAG+AGG + tig0000496:84750-84769 Msa1335560:CDS 25.0%
!! ATTAAAGAGGTTGTTAGTTT+AGG + tig0000496:84763-84782 Msa1335560:CDS 25.0%
! ATCACAACCTGAATATTATA+CGG + tig0000496:84969-84988 Msa1335560:CDS 25.0%
! ATTTGATCCGTATAATATTC+AGG - tig0000496:84979-84998 None:intergenic 25.0%
!!! ATATTTTCGTGTTATTAGTG+TGG + tig0000496:85101-85120 Msa1335560:intron 25.0%
!! AGTAAATGTATGGATTTGTT+GGG - tig0000496:85200-85219 None:intergenic 25.0%
! AAGTAAATGTATGGATTTGT+TGG - tig0000496:85201-85220 None:intergenic 25.0%
!!! ACTTTTTAAAGGTTACTGAA+TGG + tig0000496:85217-85236 Msa1335560:intron 25.0%
! ATAGCATTTACTATATAGCT+AGG + tig0000496:85300-85319 Msa1335560:intron 25.0%
! GGTAAAAAGTTTAATAAGGA+AGG + tig0000496:85826-85845 Msa1335560:intron 25.0%
!!! TATTTTTACATAGAGAAGAG+GGG + tig0000496:85857-85876 Msa1335560:intron 25.0%
! TATTAATTAGGATGTAGAGA+AGG - tig0000496:85937-85956 None:intergenic 25.0%
!! CATCCTTTATTTGCATAAAA+TGG - tig0000496:86024-86043 None:intergenic 25.0%
! AGATTTAGTTAAGTGTCAAT+GGG - tig0000496:86104-86123 None:intergenic 25.0%
! TAGATTTAGTTAAGTGTCAA+TGG - tig0000496:86105-86124 None:intergenic 25.0%
! ATATCACTACAAAGAAATGA+GGG - tig0000496:86180-86199 None:intergenic 25.0%
! AATATCACTACAAAGAAATG+AGG - tig0000496:86181-86200 None:intergenic 25.0%
!!! TAGTGATATTGATATTTTGG+TGG + tig0000496:86191-86210 Msa1335560:intron 25.0%
! TTCATAGAGATCCAAATTTA+TGG + tig0000496:86528-86547 Msa1335560:CDS 25.0%
!!! GTTTGAGATTTGTTGAAAAA+AGG + tig0000496:86842-86861 Msa1335560:three_prime_UTR 25.0%
TTGTCTTGAGTTTATTAGGA+TGG - tig0000496:84087-84106 None:intergenic 30.0%
ACACTTGTCTTGAGTTTATT+AGG - tig0000496:84091-84110 None:intergenic 30.0%
CAATTATAGGAAGACATTGT+GGG - tig0000496:84234-84253 None:intergenic 30.0%
!! CATATTTTTGTGATAAGGTG+TGG - tig0000496:84297-84316 None:intergenic 30.0%
CACACCTTATCACAAAAATA+TGG + tig0000496:84295-84314 Msa1335560:CDS 30.0%
!! TTGGCCATATTTTTGTGATA+AGG - tig0000496:84302-84321 None:intergenic 30.0%
!!! CGTTTTTGGTAAAACATTCT+TGG - tig0000496:84384-84403 None:intergenic 30.0%
!!! TGCTAAAACTATGTCGTTTT+TGG - tig0000496:84398-84417 None:intergenic 30.0%
! TATTGGCTACAACAATACTA+CGG + tig0000496:84447-84466 Msa1335560:CDS 30.0%
TCATCGTTTAAATTCCTTCT+TGG + tig0000496:84540-84559 Msa1335560:CDS 30.0%
! AATGTCATTTCCGAAAACAT+AGG - tig0000496:84649-84668 None:intergenic 30.0%
TACTATAATGAGAATGGTGT+CGG + tig0000496:84672-84691 Msa1335560:CDS 30.0%
!! TTAAGGTGGTTTGATTTTGA+TGG + tig0000496:84820-84839 Msa1335560:CDS 30.0%
!! ATTTTGATGGTTTGGAAAAG+AGG + tig0000496:84833-84852 Msa1335560:CDS 30.0%
! CTTATTGATGAACATCGTTT+TGG + tig0000496:84898-84917 Msa1335560:CDS 30.0%
TATACGGATCAAATCATCAA+AGG + tig0000496:84985-85004 Msa1335560:CDS 30.0%
TCAAATCATCAAAGGACTTA+TGG + tig0000496:84993-85012 Msa1335560:CDS 30.0%
GTTACTGAATGGATAAGTTT+CGG + tig0000496:85228-85247 Msa1335560:intron 30.0%
TATTTGCATAAAATGGCCAA+TGG - tig0000496:86017-86036 None:intergenic 30.0%
!! TGGCCATTTTATGCAAATAA+AGG + tig0000496:86018-86037 Msa1335560:intron 30.0%
ATAAAGGATGTGCCAAAATT+AGG + tig0000496:86034-86053 Msa1335560:intron 30.0%
!!! ATATTTTGGTGGACTTTTGT+AGG + tig0000496:86202-86221 Msa1335560:intron 30.0%
! TTTGTAGGTTATGTTACTTG+CGG + tig0000496:86217-86236 Msa1335560:intron 30.0%
TTTGCCATCTTCATTATTTC+TGG - tig0000496:86299-86318 None:intergenic 30.0%
!!! TAAGGAAGTTTTGAAATGTC+AGG - tig0000496:86368-86387 None:intergenic 30.0%
!! TAGACAATGCTTTGAAGATA+AGG - tig0000496:86386-86405 None:intergenic 30.0%
! GACAAATGAGGTACTAATAA+TGG - tig0000496:86437-86456 None:intergenic 30.0%
! AAATCTTCTGAAGACAAATG+AGG - tig0000496:86449-86468 None:intergenic 30.0%
! TCTTCAGAAGATTTTACCTT+AGG + tig0000496:86455-86474 Msa1335560:CDS 30.0%
! CCATCAAAATTGTGTTTTGT+GGG - tig0000496:86493-86512 None:intergenic 30.0%
! ACCATCAAAATTGTGTTTTG+TGG - tig0000496:86494-86513 None:intergenic 30.0%
!!! AATTTTGATGGTGAATGCTT+GGG + tig0000496:86502-86521 Msa1335560:CDS 30.0%
TAAACTACTTTCATTTGGGT+TGG + tig0000496:86604-86623 Msa1335560:CDS 30.0%
! AAACTACTTTCATTTGGGTT+GGG + tig0000496:86605-86624 Msa1335560:CDS 30.0%
AGGTGAAGAAAAAATTGACA+TGG + tig0000496:86718-86737 Msa1335560:CDS 30.0%
!! CACTTTACACATTGCTTTTA+AGG - tig0000496:86780-86799 None:intergenic 30.0%
ACTTATGAGTTGTGTAAAAC+AGG + tig0000496:86904-86923 Msa1335560:three_prime_UTR 30.0%
TATTAGGATGGAATGTGAAG+TGG - tig0000496:84075-84094 None:intergenic 35.0%
AGAGCTTCAAAGTGATGATA+AGG - tig0000496:84171-84190 None:intergenic 35.0%
CCAATTATAGGAAGACATTG+TGG - tig0000496:84235-84254 None:intergenic 35.0%
CCACAATGTCTTCCTATAAT+TGG + tig0000496:84232-84251 Msa1335560:CDS 35.0%
TGGTGAAGGTTTCCAATTAT+AGG - tig0000496:84247-84266 None:intergenic 35.0%
CAAATCTTCTCTCTTTGGTT+CGG + tig0000496:84319-84338 Msa1335560:CDS 35.0%
TTCCAGTTAAGAAATGAGGT+CGG - tig0000496:84423-84442 None:intergenic 35.0%
ATCTCTTCGTATTTCCAAGA+AGG - tig0000496:84557-84576 None:intergenic 35.0%
ATACAATGATTTCACCGAAG+TGG + tig0000496:84615-84634 Msa1335560:CDS 35.0%
! GGAACTTAGACCTATGTTTT+CGG + tig0000496:84636-84655 Msa1335560:CDS 35.0%
ACTATAATGAGAATGGTGTC+GGG + tig0000496:84673-84692 Msa1335560:CDS 35.0%
! AAAGAGGTTGTTAGTTTAGG+TGG + tig0000496:84766-84785 Msa1335560:CDS 35.0%
!!! AACAACGCTGGTGATTTTTT+AGG + tig0000496:84793-84812 Msa1335560:CDS 35.0%
!! GTGGTTTGATTTTGATGGTT+TGG + tig0000496:84825-84844 Msa1335560:CDS 35.0%
!!! AGAACCGATGCTTTTTTACA+AGG + tig0000496:84874-84893 Msa1335560:CDS 35.0%
!!! GAACCGATGCTTTTTTACAA+GGG + tig0000496:84875-84894 Msa1335560:CDS 35.0%
! AAGCCCTTGTAAAAAAGCAT+CGG - tig0000496:84881-84900 None:intergenic 35.0%
!!! ATGAACATCGTTTTGGAAAG+AGG + tig0000496:84905-84924 Msa1335560:CDS 35.0%
AATCATCAAAGGACTTATGG+TGG + tig0000496:84996-85015 Msa1335560:CDS 35.0%
TACTATATAGCTAGGCTTAC+AGG + tig0000496:85308-85327 Msa1335560:intron 35.0%
! TTCGGTTTTCCACCTAATTT+TGG - tig0000496:86049-86068 None:intergenic 35.0%
!! AAAGCAAGTGTTAATGGGTT+CGG - tig0000496:86067-86086 None:intergenic 35.0%
!! ACCCATTAACACTTGCTTTT+TGG + tig0000496:86068-86087 Msa1335560:intron 35.0%
CCCAAAAAGCAAGTGTTAAT+GGG - tig0000496:86072-86091 None:intergenic 35.0%
!!! CCCATTAACACTTGCTTTTT+GGG + tig0000496:86069-86088 Msa1335560:intron 35.0%
ACCCAAAAAGCAAGTGTTAA+TGG - tig0000496:86073-86092 None:intergenic 35.0%
! TTGTAGGTTATGTTACTTGC+GGG + tig0000496:86218-86237 Msa1335560:intron 35.0%
ATCATCCGTGACATTAGAAT+GGG + tig0000496:86250-86269 Msa1335560:CDS 35.0%
TTCTGGATGGTTTAGTAAAC+TGG - tig0000496:86282-86301 None:intergenic 35.0%
!! CCATCTTCATTATTTCTGGA+TGG - tig0000496:86295-86314 None:intergenic 35.0%
CCATCCAGAAATAATGAAGA+TGG + tig0000496:86292-86311 Msa1335560:CDS 35.0%
GAAGATGGCAAAAAATGAGT+TGG + tig0000496:86307-86326 Msa1335560:CDS 35.0%
! TCAGAAGATTTTACCTTAGG+AGG + tig0000496:86458-86477 Msa1335560:CDS 35.0%
TGGGATATTATATCCTCCTA+AGG - tig0000496:86474-86493 None:intergenic 35.0%
! CCCACAAAACACAATTTTGA+TGG + tig0000496:86490-86509 Msa1335560:CDS 35.0%
!!! CAATTTTGATGGTGAATGCT+TGG + tig0000496:86501-86520 Msa1335560:CDS 35.0%
GTAGGATCACTCCATAAATT+TGG - tig0000496:86542-86561 None:intergenic 35.0%
!!! TGTTGATTCAGTGTTTTGAG+TGG + tig0000496:86687-86706 Msa1335560:CDS 35.0%
!! TGTTTTGAGTGGAAACGAAT+AGG + tig0000496:86698-86717 Msa1335560:CDS 35.0%
ATTGACATGGTTGAAGCAAA+AGG + tig0000496:86731-86750 Msa1335560:CDS 35.0%
GCGACATCCATTGAATATTA+AGG + tig0000496:86799-86818 Msa1335560:CDS 35.0%
TTGTGTAAAACAGGCTCATA+TGG + tig0000496:86913-86932 Msa1335560:three_prime_UTR 35.0%
GCTAGACAACATTCTTCAAA+AGG - tig0000496:86945-86964 None:intergenic 35.0%
AAGATCAAAAACCTTCCACC+AGG + tig0000496:84208-84227 Msa1335560:CDS 40.0%
ATGGCCAAATCTTCTCTCTT+TGG + tig0000496:84314-84333 Msa1335560:CDS 40.0%
CGAACCAAAGAGAGAAGATT+TGG - tig0000496:84321-84340 None:intergenic 40.0%
GGTAAAACATTCTTGGGTCA+TGG - tig0000496:84377-84396 None:intergenic 40.0%
AACCGACCTCATTTCTTAAC+TGG + tig0000496:84418-84437 Msa1335560:CDS 40.0%
AATCACCTTATGGTGACCAT+TGG + tig0000496:84476-84495 Msa1335560:CDS 40.0%
CATAGGTCTAAGTTCCACTT+CGG - tig0000496:84632-84651 None:intergenic 40.0%
! CTATAATGAGAATGGTGTCG+GGG + tig0000496:84674-84693 Msa1335560:CDS 40.0%
TTGTGATGTGAGTGATGTTG+AGG + tig0000496:84717-84736 Msa1335560:CDS 40.0%
CTGAGTAGATAGTTGTACTG+TGG - tig0000496:85366-85385 None:intergenic 40.0%
AGGGCTGAGTATATTTCCAT+TGG + tig0000496:85998-86017 Msa1335560:intron 40.0%
AAGGATGTGCCAAAATTAGG+TGG + tig0000496:86037-86056 Msa1335560:intron 40.0%
!!! CACTTGCTTTTTGGGTACAA+AGG + tig0000496:86077-86096 Msa1335560:intron 40.0%
CATCATCCGTGACATTAGAA+TGG + tig0000496:86249-86268 Msa1335560:CDS 40.0%
CATAGCCCATTCTAATGTCA+CGG - tig0000496:86258-86277 None:intergenic 40.0%
! AATGAGTTGGACACTCACAT+AGG + tig0000496:86320-86339 Msa1335560:CDS 40.0%
! CTCTCTGGCTTAAAACATGT+AGG - tig0000496:86560-86579 None:intergenic 40.0%
!! CTACATGTTTTAAGCCAGAG+AGG + tig0000496:86558-86577 Msa1335560:CDS 40.0%
!! TTTCATTTGGGTTGGGTAGA+AGG + tig0000496:86612-86631 Msa1335560:CDS 40.0%
!! TTCATTTGGGTTGGGTAGAA+GGG + tig0000496:86613-86632 Msa1335560:CDS 40.0%
GGTTGAAGCAAAAGGAATCA+CGG + tig0000496:86739-86758 Msa1335560:CDS 40.0%
!! GTGGTTGTTTGAGTTGGTGA+AGG - tig0000496:84261-84280 None:intergenic 45.0%
ATAAGGTGTGGAATGTGTGG+TGG - tig0000496:84285-84304 None:intergenic 45.0%
GTGATAAGGTGTGGAATGTG+TGG - tig0000496:84288-84307 None:intergenic 45.0%
ACGGTAGCACAATCACCTTA+TGG + tig0000496:84466-84485 Msa1335560:CDS 45.0%
GTGTCGGGGAAAAGATACTA+TGG + tig0000496:84688-84707 Msa1335560:CDS 45.0%
GATGTAGAGAAGGAGCAGAA+AGG - tig0000496:85927-85946 None:intergenic 45.0%
CCTTCTTTCTCAAACCTCTC+TGG - tig0000496:86575-86594 None:intergenic 45.0%
CCAGAGAGGTTTGAGAAAGA+AGG + tig0000496:86572-86591 Msa1335560:CDS 45.0%
GAGGTTTGAGAAAGAAGGTG+AGG + tig0000496:86577-86596 Msa1335560:CDS 45.0%
AGTCAATCCCACAGTCCTTT+GGG - tig0000496:86660-86679 None:intergenic 45.0%
AAGTCAATCCCACAGTCCTT+TGG - tig0000496:86661-86680 None:intergenic 45.0%
! AAGGACTGTGGGATTGACTT+TGG + tig0000496:86661-86680 Msa1335560:CDS 45.0%
! AGGACTGTGGGATTGACTTT+GGG + tig0000496:86662-86681 Msa1335560:CDS 45.0%
TGAAGCAAAAGGAATCACGG+TGG + tig0000496:86742-86761 Msa1335560:CDS 45.0%
GAAGCAAAAGGAATCACGGT+GGG + tig0000496:86743-86762 Msa1335560:CDS 45.0%
ATAGGAAGACATTGTGGGCC+TGG - tig0000496:84229-84248 None:intergenic 50.0%
GGTGGAGTGGTTGTTTGAGT+TGG - tig0000496:84267-84286 None:intergenic 50.0%
TTGCGCCAATGGTCACCATA+AGG - tig0000496:84484-84503 None:intergenic 50.0%
TACGTCGAAGATTGCGCCAA+TGG - tig0000496:84495-84514 None:intergenic 50.0%
TTAGGTGGAGCTAACAACGC+TGG + tig0000496:84781-84800 Msa1335560:CDS 50.0%
AGCTGCTGCATGTAGTCGAA+GGG - tig0000496:86414-86433 None:intergenic 50.0%
CTTTGGGCTAAGCTTTCTCC+AGG - tig0000496:86644-86663 None:intergenic 50.0%
CTGGAGAAAGCTTAGCCCAA+AGG + tig0000496:86642-86661 Msa1335560:CDS 50.0%
AAGCTTAGCCCAAAGGACTG+TGG + tig0000496:86649-86668 Msa1335560:CDS 50.0%
AGCTTAGCCCAAAGGACTGT+GGG + tig0000496:86650-86669 Msa1335560:CDS 50.0%
! GTGTGGAATGTGTGGTGGAG+TGG - tig0000496:84280-84299 None:intergenic 55.0%
GAGCTGCTGCATGTAGTCGA+AGG - tig0000496:86415-86434 None:intergenic 55.0%
TTGGGTAGAAGGGCTTGTCC+TGG + tig0000496:86623-86642 Msa1335560:CDS 55.0%
GACATTGTGGGCCTGGTGGA+AGG - tig0000496:84222-84241 None:intergenic 60.0%
GGAAGACATTGTGGGCCTGG+TGG - tig0000496:84226-84245 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0000496 gene 84050 87003 84050 ID=Msa1335560;Name=Msa1335560
tig0000496 mRNA 84050 87003 84050 ID=Msa1335560-mRNA-1;Parent=Msa1335560;Name=Msa1335560-mRNA-1;_AED=0.01;_eAED=0.01;_QI=80|1|1|1|1|1|2|171|498
tig0000496 exon 84050 85017 84050 ID=Msa1335560-mRNA-1:exon:241;Parent=Msa1335560-mRNA-1
tig0000496 exon 86224 87003 86224 ID=Msa1335560-mRNA-1:exon:242;Parent=Msa1335560-mRNA-1
tig0000496 five_prime_UTR 84050 84129 84050 ID=Msa1335560-mRNA-1:five_prime_utr;Parent=Msa1335560-mRNA-1
tig0000496 CDS 84130 85017 84130 ID=Msa1335560-mRNA-1:cds;Parent=Msa1335560-mRNA-1
tig0000496 CDS 86224 86832 86224 ID=Msa1335560-mRNA-1:cds;Parent=Msa1335560-mRNA-1
tig0000496 three_prime_UTR 86833 87003 86833 ID=Msa1335560-mRNA-1:three_prime_utr;Parent=Msa1335560-mRNA-1
Gene Sequence

>Msa1335560

ATGAGTACTTTCTATCTCTCACTCATCTCTCTCTTTTTCCTTATCATCACTTTGAAGCTCTTCTTCAACACATCAAGAAAGATCAAAAACCTTCCACCAGGCCCACAATGTCTTCCTATAATTGGAAACCTTCACCAACTCAAACAACCACTCCACCACACATTCCACACCTTATCACAAAAATATGGCCAAATCTTCTCTCTTTGGTTCGGTTCTCGTCTCGTTGTTGTTGTTTCATCATTAACCATGACCCAAGAATGTTTTACCAAAAACGACATAGTTTTAGCAAACCGACCTCATTTCTTAACTGGAAAATATATTGGCTACAACAATACTACGGTAGCACAATCACCTTATGGTGACCATTGGCGCAATCTTCGACGTATATTATCGATTGAAGTACTCTCATCTCATCGTTTAAATTCCTTCTTGGAAATACGAAGAGATGAGATTATGAGACTAATACAAAAGCTAGCACAAAAATCATACAATGATTTCACCGAAGTGGAACTTAGACCTATGTTTTCGGAAATGACATTTAATACTATAATGAGAATGGTGTCGGGGAAAAGATACTATGGAAATGATTGTGATGTGAGTGATGTTGAGGAAGCAAGATTGTTTAGAGAGATAATTAAAGAGGTTGTTAGTTTAGGTGGAGCTAACAACGCTGGTGATTTTTTAGGTTTTTTAAGGTGGTTTGATTTTGATGGTTTGGAAAAGAGGCTTAAGAAGATTAGTAAGAGAACCGATGCTTTTTTACAAGGGCTTATTGATGAACATCGTTTTGGAAAGAGGAATAGTAACACTATGATTGATCATCTCTTAACACAGCAACAATCACAACCTGAATATTATACGGATCAAATCATCAAAGGACTTATGGTGGTTATGTTACTTGCGGGAACAGACACATCATCCGTGACATTAGAATGGGCTATGTCCAGTTTACTAAACCATCCAGAAATAATGAAGATGGCAAAAAATGAGTTGGACACTCACATAGGACAAGAACGTTTAGTAGATGAGCCTGACATTTCAAAACTTCCTTATCTTCAAAGCATTGTCTATGAAACCCTTCGACTACATGCAGCAGCTCCATTATTAGTACCTCATTTGTCTTCAGAAGATTTTACCTTAGGAGGATATAATATCCCACAAAACACAATTTTGATGGTGAATGCTTGGGTCATTCATAGAGATCCAAATTTATGGAGTGATCCTACATGTTTTAAGCCAGAGAGGTTTGAGAAAGAAGGTGAGGTAAATAAACTACTTTCATTTGGGTTGGGTAGAAGGGCTTGTCCTGGAGAAAGCTTAGCCCAAAGGACTGTGGGATTGACTTTGGGTTTGTTGATTCAGTGTTTTGAGTGGAAACGAATAGGTGAAGAAAAAATTGACATGGTTGAAGCAAAAGGAATCACGGTGGGAAAAAAGATTTCCTTAAAAGCAATGTGTAAAGTGCGACATCCATTGAATATTAAGGATGTTTTTTAG
Protein sequence

>Msa1335560

MSTFYLSLISLFFLIITLKLFFNTSRKIKNLPPGPQCLPIIGNLHQLKQPLHHTFHTLSQKYGQIFSLWFGSRLVVVVSSLTMTQECFTKNDIVLANRPHFLTGKYIGYNNTTVAQSPYGDHWRNLRRILSIEVLSSHRLNSFLEIRRDEIMRLIQKLAQKSYNDFTEVELRPMFSEMTFNTIMRMVSGKRYYGNDCDVSDVEEARLFREIIKEVVSLGGANNAGDFLGFLRWFDFDGLEKRLKKISKRTDAFLQGLIDEHRFGKRNSNTMIDHLLTQQQSQPEYYTDQIIKGLMVVMLLAGTDTSSVTLEWAMSSLLNHPEIMKMAKNELDTHIGQERLVDEPDISKLPYLQSIVYETLRLHAAAPLLVPHLSSEDFTLGGYNIPQNTILMVNAWVIHRDPNLWSDPTCFKPERFEKEGEVNKLLSFGLGRRACPGESLAQRTVGLTLGLLIQCFEWKRIGEEKIDMVEAKGITVGKKISLKAMCKVRHPLNIKDVF*