AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1205480


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205480 MtrunA17_Chr4g0054731 98.518 742 4 3 1 740 1 737 0.0 1491
Msa1205480 MtrunA17_Chr4g0064071 81.452 248 9 1 294 541 28 238 1.84e-121 363
Msa1205480 MtrunA17_Chr4g0064071 48.718 78 32 2 172 241 1 78 3.43e-11 63.9
Msa1205480 MtrunA17_Chr2g0286891 42.297 357 193 4 392 735 519 875 3.41e-76 263
Msa1205480 MtrunA17_Chr2g0286891 40.000 195 86 6 80 265 118 290 7.54e-31 129
Msa1205480 MtrunA17_Chr1g0196471 27.246 345 232 4 393 733 395 724 2.09e-32 134
Msa1205480 MtrunA17_Chr1g0196471 32.418 182 79 6 74 237 53 208 8.13e-15 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205480 AT2G35330.1 57.351 755 263 15 1 740 28 738 0.0 746
Msa1205480 AT2G35330.2 57.351 755 263 15 1 740 1 711 0.0 746
Msa1205480 AT1G32530.1 54.050 753 291 17 1 740 1 711 0.0 657
Msa1205480 AT4G03000.1 36.034 358 206 6 393 734 458 808 6.99e-58 211
Msa1205480 AT4G03000.1 35.294 153 79 2 75 227 81 213 5.72e-18 89.4
Msa1205480 AT4G03000.2 36.034 358 206 6 393 734 458 808 6.99e-58 211
Msa1205480 AT4G03000.2 35.294 153 79 2 75 227 81 213 5.72e-18 89.4
Msa1205480 AT1G03365.1 35.088 342 209 2 393 734 488 816 8.70e-52 194
Msa1205480 AT1G03365.1 35.200 125 61 2 99 223 108 212 2.53e-14 77.4
Msa1205480 AT1G03365.2 35.088 342 209 2 393 734 488 816 8.70e-52 194
Msa1205480 AT1G03365.2 35.200 125 61 2 99 223 108 212 2.53e-14 77.4
Msa1205480 AT4G03000.3 38.333 180 111 0 393 572 458 637 2.46e-30 128
Msa1205480 AT4G03000.3 35.294 153 79 2 75 227 81 213 9.09e-18 88.2
Msa1205480 AT4G03000.4 38.333 180 111 0 393 572 458 637 2.97e-30 127
Msa1205480 AT4G03000.4 35.294 153 79 2 75 227 81 213 4.69e-18 89.0
Msa1205480 AT4G03000.6 38.333 180 111 0 393 572 458 637 2.97e-30 127
Msa1205480 AT4G03000.6 35.294 153 79 2 75 227 81 213 4.69e-18 89.0
Msa1205480 AT4G03000.5 38.333 180 111 0 393 572 458 637 3.16e-30 127
Msa1205480 AT4G03000.5 35.294 153 79 2 75 227 81 213 5.76e-18 89.0

Find 219 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCCCTTTCTTCAATTTC+TGG 0.004804 8_1:+61804017 None:intergenic
ATAAATTTGCACTTACTTAT+TGG 0.146821 8_1:-61801208 Msa1205480:three_prime_UTR
TTGGATTCTCCGGTTGTATC+TGG 0.155255 8_1:-61804331 Msa1205480:CDS
CAACCAGGTTCATCAGAATT+AGG 0.165784 8_1:+61805156 None:intergenic
CGACTCTGATGCACTTAATT+TGG 0.180809 8_1:+61803850 None:intergenic
CTTGAATCTTGATGAAAATT+TGG 0.183926 8_1:-61804221 Msa1205480:CDS
CAGATCGAACAGATGCTTTA+AGG 0.184682 8_1:+61801585 None:intergenic
TTTCATGAGGGGTGGGGATT+TGG 0.196073 8_1:-61804571 Msa1205480:CDS
CAACAGAGAATCCGTGTATT+TGG 0.202063 8_1:-61801299 Msa1205480:CDS
AAGAATAATGTTAGATTATT+AGG 0.205205 8_1:+61805489 None:intergenic
TATGTTGGTGTTGGTGTTAA+TGG 0.237164 8_1:-61804919 Msa1205480:CDS
TGCTAAGCTGCTTCTGGATT+TGG 0.237221 8_1:-61801492 Msa1205480:CDS
TAGGGTTTGGATTGGGAATA+GGG 0.243797 8_1:+61805175 None:intergenic
TAAATTTGCACTTACTTATT+GGG 0.244070 8_1:-61801207 Msa1205480:three_prime_UTR
ATCCTTAATTACAGGCTAAA+TGG 0.256016 8_1:-61801784 Msa1205480:intron
ATTTCATCAGATAAAGGATT+TGG 0.274722 8_1:-61804155 Msa1205480:CDS
CCACCCCTCATGAAACTTAC+AGG 0.278418 8_1:+61804579 None:intergenic
GACAATTGCTAAGCTGCTTC+TGG 0.282396 8_1:-61801498 Msa1205480:CDS
CTTTGATGGGTGAAGTATTT+TGG 0.282543 8_1:+61801549 None:intergenic
TTAGGGTTTGGATTGGGAAT+AGG 0.289527 8_1:+61805174 None:intergenic
TTTCCCTTTCTTCAATTTCT+GGG 0.295767 8_1:+61804018 None:intergenic
TCGTAGTGCTGTGTCGAATT+TGG 0.296261 8_1:-61804350 Msa1205480:CDS
AACAGAGAATCCGTGTATTT+GGG 0.305584 8_1:-61801298 Msa1205480:CDS
TTGAGGAATGGGCATTGTTA+TGG 0.316950 8_1:-61805009 Msa1205480:CDS
AACCAGGTTCATCAGAATTA+GGG 0.322926 8_1:+61805157 None:intergenic
AGGGGTGGGGATTTGGAAAT+GGG 0.324779 8_1:-61804564 Msa1205480:CDS
TGTTTCGAAGATTGTTGCTT+TGG 0.325390 8_1:-61805064 Msa1205480:CDS
CTCTTCAACAAGCACTTCAT+TGG 0.328174 8_1:+61804451 None:intergenic
GCATTTGGAGGAGTATTCTT+TGG 0.331101 8_1:-61804824 Msa1205480:CDS
TTTCGCTGATTTGAAGCATT+TGG 0.335418 8_1:-61804839 Msa1205480:CDS
TTAGCAATTGTCTCTCTTTG+AGG 0.339808 8_1:+61801509 None:intergenic
GGAGCTGCTGTTGTTGAATC+TGG 0.341405 8_1:-61804655 Msa1205480:CDS
GAGGGGTGGGGATTTGGAAA+TGG 0.347011 8_1:-61804565 Msa1205480:CDS
TGTACCCTCAAAGTCTTTGA+TGG 0.348726 8_1:+61801535 None:intergenic
TCCTATGCAATCTGGAGAAC+AGG 0.350120 8_1:+61801172 None:intergenic
GCATCACCTTTACTCAAATT+CGG 0.355254 8_1:+61804769 None:intergenic
TTTGAGGCCTGATTCCTCTA+TGG 0.355386 8_1:+61805251 None:intergenic
TTGGAGGAGTATTCTTTGGC+TGG 0.358204 8_1:-61804820 Msa1205480:CDS
CCCCTTCGCCTGCAATTGCT+TGG 0.358244 8_1:+61804390 None:intergenic
TAATTCTGATGAACCTGGTT+GGG 0.358852 8_1:-61805154 Msa1205480:CDS
TGCTCGTGAGGGTGAGAATA+TGG 0.360974 8_1:-61804878 Msa1205480:CDS
GGCTTATCAGAAAGCATTGC+AGG 0.365464 8_1:-61804104 Msa1205480:CDS
ATTTCCGATGAATCGGAATC+AGG 0.366412 8_1:+61805294 None:intergenic
ATCTGATTCAGCTGCTTCCT+TGG 0.367941 8_1:+61801703 None:intergenic
GAGTATATTTCATCAGATAA+AGG 0.368409 8_1:-61804161 Msa1205480:CDS
TTTGAAAGAGAAGATATTAG+AGG 0.370810 8_1:-61803726 Msa1205480:CDS
CATCTCCGAGAGTCTCTTCA+TGG 0.375871 8_1:+61803976 None:intergenic
AAGGGGAAGGCCAATGTTCC+TGG 0.377379 8_1:-61804373 Msa1205480:CDS
AGCCCATTCTTTCCGCTCCT+TGG 0.380485 8_1:+61804123 None:intergenic
ACGATCAACGGCGACGGCGG+CGG 0.380961 8_1:-61805325 Msa1205480:CDS
TGGATTCTCCGGTTGTATCT+GGG 0.386567 8_1:-61804330 Msa1205480:CDS
GGTTCATCAGAATTAGGGTT+TGG 0.391570 8_1:+61805162 None:intergenic
TCAATCTCCCTCTGCAAAAC+CGG 0.392850 8_1:+61804502 None:intergenic
GTTTCGAAGATTGTTGCTTT+GGG 0.398776 8_1:-61805063 Msa1205480:CDS
GAAATTGAAGAAAGGGAAAC+AGG 0.404324 8_1:-61804014 Msa1205480:CDS
GAGAAAGATCAAACCTCTTC+GGG 0.407254 8_1:+61804476 None:intergenic
CTACTGCACTGAGGAGCAAT+TGG 0.419591 8_1:-61805130 Msa1205480:CDS
ATCTTTGATTTCCGATGAAT+CGG 0.419767 8_1:+61805287 None:intergenic
TGATGAAAATTTGGAGTTTG+TGG 0.423422 8_1:-61804212 Msa1205480:CDS
GATTACCCCACGAATGCAAA+TGG 0.426274 8_1:-61804541 Msa1205480:CDS
CTTGAAGAAACTTCTAGCTT+GGG 0.427350 8_1:-61803786 Msa1205480:CDS
ATCAACGGCGACGGCGGCGG+CGG 0.431145 8_1:-61805322 Msa1205480:CDS
AACAAAACTCCTATGCAATC+TGG 0.431643 8_1:+61801164 None:intergenic
AGCAAACACCAAGCAATTGC+AGG 0.433045 8_1:-61804398 Msa1205480:CDS
GCTAAATGCAGTGATGAGTA+TGG 0.433887 8_1:-61801365 Msa1205480:CDS
CAAATTTATGTAAAATTCAC+GGG 0.434649 8_1:+61801222 None:intergenic
GTTAATGGTGCTGTTTGTGC+TGG 0.435518 8_1:-61804904 Msa1205480:CDS
ACTTGAAGAAACTTCTAGCT+TGG 0.439554 8_1:-61803787 Msa1205480:CDS
CAATATCCCATTTGCATTCG+TGG 0.442568 8_1:+61804534 None:intergenic
CTTGTTTGAAAATAAGAAGT+TGG 0.443742 8_1:-61801050 Msa1205480:three_prime_UTR
CAGCTGAATCAGATAATAAG+AGG 0.444046 8_1:-61801694 Msa1205480:CDS
GGAGAAAGATCAAACCTCTT+CGG 0.445672 8_1:+61804475 None:intergenic
TCGAAATCCATAGAGGAATC+AGG 0.447314 8_1:-61805258 Msa1205480:CDS
GGAGTATTCTTTGGCTGGGA+TGG 0.447957 8_1:-61804815 Msa1205480:CDS
CGCTGATTTGAAGCATTTGG+AGG 0.451062 8_1:-61804836 Msa1205480:CDS
CAAATACACGGATTCTCTGT+TGG 0.455039 8_1:+61801300 None:intergenic
GCCACGATCAACGGCGACGG+CGG 0.457825 8_1:-61805328 Msa1205480:CDS
TCAGAATTAGGGTTTGGATT+GGG 0.457934 8_1:+61805168 None:intergenic
TTCACCCATCAAAGACTTTG+AGG 0.458864 8_1:-61801540 Msa1205480:CDS
TGACTGAGCTCAAAACATTA+CGG 0.460683 8_1:-61804057 Msa1205480:CDS
GTTGAATCTGGTGGTGGTGG+TGG 0.462730 8_1:-61804643 Msa1205480:CDS
GTACTAAACCGGTTGCTCAT+AGG 0.464174 8_1:-61804612 Msa1205480:CDS
TGCTTCAAATCAGCGAAAAC+CGG 0.464549 8_1:+61804844 None:intergenic
ATCAGAATTAGGGTTTGGAT+TGG 0.465804 8_1:+61805167 None:intergenic
AGGAATGGGCATTGTTATGG+TGG 0.467079 8_1:-61805006 Msa1205480:CDS
GCAAATTTATGTAAAATTCA+CGG 0.467411 8_1:+61801221 None:intergenic
TGCATTTAGCACACATGACT+TGG 0.467599 8_1:+61801378 None:intergenic
GATGGTGTGTTTGTTGCAAC+AGG 0.467679 8_1:-61804797 Msa1205480:CDS
ACTATAGAGATTCCTGTGCC+TGG 0.471233 8_1:-61804700 Msa1205480:CDS
GGTCAAGTGGACCGTGCAAA+TGG 0.472634 8_1:-61803929 Msa1205480:CDS
AGGCCAAGGAGCGGAAAGAA+TGG 0.476091 8_1:-61804126 Msa1205480:CDS
CTCTGATGCACTTAATTTGG+AGG 0.476899 8_1:+61803853 None:intergenic
TCACCCATCAAAGACTTTGA+GGG 0.477605 8_1:-61801539 Msa1205480:CDS
GATCGTATTTGAAGGGTTTG+AGG 0.479171 8_1:+61805235 None:intergenic
TTCAACAAGCACTTCATTGG+CGG 0.480061 8_1:+61804454 None:intergenic
GGAGTGCGAGTGCGGGTGCG+AGG 0.480751 8_1:-61804678 Msa1205480:CDS
GAGTGCGAGTGCGGGTGCGA+GGG 0.482418 8_1:-61804677 Msa1205480:CDS
CATTATTCCTAAAATTTCGA+TGG 0.482890 8_1:+61805521 None:intergenic
AATATCCCATTTGCATTCGT+GGG 0.483953 8_1:+61804535 None:intergenic
TGTGTTTGTTGCAACAGGTT+AGG 0.484982 8_1:-61804792 Msa1205480:CDS
TGGGATATTGTCTTGTGCTC+CGG 0.488650 8_1:-61804521 Msa1205480:CDS
ATAGATATATTTCAGTGACT+TGG 0.489594 8_1:-61801255 Msa1205480:three_prime_UTR
TAAATGGAAGGAGGAGTTGA+AGG 0.491096 8_1:-61801768 Msa1205480:CDS
TTGATACGTGTGGACACTCT+CGG 0.491280 8_1:-61804294 Msa1205480:CDS
AATGTTGCCATGTTTGCTGC+TGG 0.494753 8_1:-61804427 Msa1205480:CDS
AGACCCAGAAATTGAAGAAA+GGG 0.496589 8_1:-61804021 Msa1205480:CDS
TTGAATCGAAATGGGTTGTA+CGG 0.497511 8_1:-61805382 Msa1205480:exon
GGAAAAGACCTATGAGCAAC+CGG 0.500424 8_1:+61804604 None:intergenic
GAATATGGATGAGCTTGAAC+CGG 0.501233 8_1:-61804863 Msa1205480:CDS
ACAGAAAGCTAAGCTGCAAA+AGG 0.502215 8_1:-61803759 Msa1205480:CDS
TTAGATCATCCTTGTGGCGC+TGG 0.503533 8_1:+61801633 None:intergenic
GCCGCCGTCGCCGTTGATCG+TGG 0.505363 8_1:+61805327 None:intergenic
TGGAGGAGTATTCTTTGGCT+GGG 0.506088 8_1:-61804819 Msa1205480:CDS
GCACCGAGTTCACAGCCTCT+TGG 0.507080 8_1:+61804260 None:intergenic
AGAAACACATCAGAGCTAAT+CGG 0.508916 8_1:-61805353 Msa1205480:CDS
AATTCTGATGAACCTGGTTG+GGG 0.509977 8_1:-61805153 Msa1205480:CDS
GGCCAAGGAGCGGAAAGAAT+GGG 0.512400 8_1:-61804125 Msa1205480:CDS
AGTAATAATGGTGCTTATGT+TGG 0.514987 8_1:-61804934 Msa1205480:CDS
TGCTGAAATCAGAGCAGAGA+TGG 0.515753 8_1:-61803879 Msa1205480:CDS
GTACCCTCAAAGTCTTTGAT+GGG 0.516395 8_1:+61801536 None:intergenic
CCACCCTGTAAGTTTCATGA+GGG 0.516547 8_1:-61804583 Msa1205480:CDS
GTGCCTGGGAGTGCGAGTGC+GGG 0.517029 8_1:-61804685 Msa1205480:CDS
TTCTCTGTTGGATTTGAACT+CGG 0.517905 8_1:+61801312 None:intergenic
TAATCGGCGGCCACGATCAA+CGG 0.520002 8_1:-61805337 Msa1205480:CDS
GAGACCCAGAAATTGAAGAA+AGG 0.520671 8_1:-61804022 Msa1205480:CDS
TAGATATATTTCAGTGACTT+GGG 0.520965 8_1:-61801254 Msa1205480:three_prime_UTR
ACCAAGCAATTGCAGGCGAA+GGG 0.521306 8_1:-61804391 Msa1205480:CDS
CTGTAAGTTTCATGAGGGGT+GGG 0.524003 8_1:-61804578 Msa1205480:CDS
TCCACCCTGTAAGTTTCATG+AGG 0.526508 8_1:-61804584 Msa1205480:CDS
GGGGTGGGGATTTGGAAATG+GGG 0.527002 8_1:-61804563 Msa1205480:CDS
AATGGTGCTTATGTTGGTGT+TGG 0.527750 8_1:-61804928 Msa1205480:CDS
GTTTCAGCCCCAGATACAAC+CGG 0.528436 8_1:+61804322 None:intergenic
AAATTTGGAGTTTGTGGCTG+AGG 0.529000 8_1:-61804206 Msa1205480:CDS
ACGAGAAAGATCGTATTTGA+AGG 0.529377 8_1:+61805227 None:intergenic
TGGTAAGGCTCGTACTAAAC+CGG 0.530336 8_1:-61804623 Msa1205480:CDS
TGTGTCGAATTTGGATTCTC+CGG 0.531438 8_1:-61804341 Msa1205480:CDS
CATGAAGAGACTCTCGGAGA+TGG 0.532852 8_1:-61803975 Msa1205480:CDS
TGATACGTGTGGACACTCTC+GGG 0.533853 8_1:-61804293 Msa1205480:CDS
CAAATACGATCTTTCTCGTG+TGG 0.533870 8_1:-61805223 Msa1205480:CDS
TTCTCACAGCTCCATTTGCA+CGG 0.534333 8_1:+61803918 None:intergenic
CGAGAAAGATCGTATTTGAA+GGG 0.534571 8_1:+61805228 None:intergenic
AGTGCGAGTGCGGGTGCGAG+GGG 0.535788 8_1:-61804676 Msa1205480:CDS
CACCAAGCAATTGCAGGCGA+AGG 0.537169 8_1:-61804392 Msa1205480:CDS
GCAATTGCAGGCGAAGGGGA+AGG 0.538678 8_1:-61804386 Msa1205480:CDS
TGGGCATTGTTATGGTGGGA+TGG 0.538707 8_1:-61805001 Msa1205480:CDS
CTGCACTGAGGAGCAATTGG+AGG 0.540784 8_1:-61805127 Msa1205480:CDS
TTTGGGTTATGATGAAGATA+CGG 0.544122 8_1:-61805046 Msa1205480:CDS
GAAGGCTCAAGAAGATGCCT+TGG 0.547605 8_1:-61801750 Msa1205480:CDS
GATGGAGAATGCTTTGAGAA+AGG 0.547829 8_1:-61803957 Msa1205480:CDS
GCTGTTGTTGAATCTGGTGG+TGG 0.548584 8_1:-61804649 Msa1205480:CDS
TGTGCCTGGGAGTGCGAGTG+CGG 0.548643 8_1:-61804686 Msa1205480:CDS
GGATTCTCCGGTTGTATCTG+GGG 0.550596 8_1:-61804329 Msa1205480:CDS
GTTAGGCCGAATTTGAGTAA+AGG 0.551522 8_1:-61804775 Msa1205480:CDS
TGTAAGTTTCATGAGGGGTG+GGG 0.551649 8_1:-61804577 Msa1205480:CDS
GTTGTTGAATCTGGTGGTGG+TGG 0.554384 8_1:-61804646 Msa1205480:CDS
TAATGAGTGATCTTCATGTT+GGG 0.554772 8_1:-61804732 Msa1205480:CDS
AGAATGCATTATATGTATGA+AGG 0.554862 8_1:-61801435 Msa1205480:CDS
TGTATCTGGGGCTGAAACCA+CGG 0.555470 8_1:-61804317 Msa1205480:CDS
ATTACCCCACGAATGCAAAT+GGG 0.556457 8_1:-61804540 Msa1205480:CDS
TCTAAAACCAGCAGCAAACA+TGG 0.556498 8_1:+61804420 None:intergenic
CTATAGAGATTCCTGTGCCT+GGG 0.558646 8_1:-61804699 Msa1205480:CDS
TGAAGAGGAGCGCCGTTCCA+AGG 0.558816 8_1:-61801720 Msa1205480:CDS
CTAATGAGTGATCTTCATGT+TGG 0.560824 8_1:-61804733 Msa1205480:CDS
CACATGACTTGGTGAGCACA+CGG 0.563461 8_1:+61801389 None:intergenic
CCTGTAAGTTTCATGAGGGG+TGG 0.564269 8_1:-61804579 Msa1205480:CDS
TGCCTTGGCACTCGTTGAAG+AGG 0.564467 8_1:-61801735 Msa1205480:CDS
CACCCTGTAAGTTTCATGAG+GGG 0.565523 8_1:-61804582 Msa1205480:CDS
CTCCTCTTCAACGAGTGCCA+AGG 0.565852 8_1:+61801733 None:intergenic
CCCTGTTCTCCAGATTGCAT+AGG 0.567898 8_1:-61801173 Msa1205480:three_prime_UTR
GGAATGGGCATTGTTATGGT+GGG 0.568206 8_1:-61805005 Msa1205480:CDS
AAAACCTGATTCCGATTCAT+CGG 0.572359 8_1:-61805298 Msa1205480:CDS
TGAAGATACGGCGTTGAAAG+CGG 0.573429 8_1:-61805034 Msa1205480:CDS
GCACTCGCACTCCCAGGCAC+AGG 0.573638 8_1:+61804688 None:intergenic
TAACCAAGAGGCTGTGAACT+CGG 0.574321 8_1:-61804263 Msa1205480:CDS
ATTCAGCTGCTTCCTTGGAA+CGG 0.574952 8_1:+61801708 None:intergenic
TTAATTACAGGCTAAATGGA+AGG 0.576922 8_1:-61801780 Msa1205480:intron
CTAATTCTGATGAACCTGGT+TGG 0.578658 8_1:-61805155 Msa1205480:CDS
GCTGCTGTTGTTGAATCTGG+TGG 0.582460 8_1:-61804652 Msa1205480:CDS
AACATTACGGATGGATAGAG+AGG 0.582992 8_1:-61804044 Msa1205480:CDS
GAGAAAGGCTAGTGGTCAAG+TGG 0.583903 8_1:-61803942 Msa1205480:CDS
CACCCCTCATGAAACTTACA+GGG 0.584927 8_1:+61804580 None:intergenic
AGTGATGAGTATGGGAAGAA+TGG 0.586588 8_1:-61801356 Msa1205480:CDS
AGCACTACGACCAGGAACAT+TGG 0.589300 8_1:+61804363 None:intergenic
TGCGATTTCGAAATCCATAG+AGG 0.591102 8_1:-61805265 Msa1205480:CDS
GCACCCGCACTCGCACTCCC+AGG 0.592742 8_1:+61804682 None:intergenic
CCTATGCAATCTGGAGAACA+GGG 0.597317 8_1:+61801173 None:intergenic
AGCTGAATCAGATAATAAGA+GGG 0.599087 8_1:-61801693 Msa1205480:CDS
TCAGTGCAGTAGCCCCAACC+AGG 0.599669 8_1:+61805141 None:intergenic
GCGGCCACGATCAACGGCGA+CGG 0.600531 8_1:-61805331 Msa1205480:CDS
TGAGCTCAAAACATTACGGA+TGG 0.602903 8_1:-61804053 Msa1205480:CDS
TTCGACACAGCACTACGACC+AGG 0.603889 8_1:+61804355 None:intergenic
GAAAGGGAAACAGGCACTTG+AGG 0.609973 8_1:-61804005 Msa1205480:CDS
CAAATTAAGTGCATCAGAGT+CGG 0.614461 8_1:-61803849 Msa1205480:CDS
CCAAGCAATTGCAGGCGAAG+GGG 0.618090 8_1:-61804390 Msa1205480:CDS
ACGAGCATGCCCCAAATACA+CGG 0.623089 8_1:+61801288 None:intergenic
CACAACCATGAAGAGACTCT+CGG 0.624070 8_1:-61803981 Msa1205480:CDS
AACCCTAATTCTGATGAACC+TGG 0.627095 8_1:-61805159 Msa1205480:CDS
ACAGAGAATCCGTGTATTTG+GGG 0.627894 8_1:-61801297 Msa1205480:CDS
TGGATTTGAACTCGGCAGCA+AGG 0.632471 8_1:+61801320 None:intergenic
TGAAATCAGAGCAGAGATGG+AGG 0.635617 8_1:-61803876 Msa1205480:CDS
GTCTGCTTAGATCATCCTTG+TGG 0.636940 8_1:+61801627 None:intergenic
CTAAATGCAGTGATGAGTAT+GGG 0.638809 8_1:-61801364 Msa1205480:CDS
ATTAGATTTCCAGCGCCACA+AGG 0.640698 8_1:-61801642 Msa1205480:CDS
GTTTGTGGCTGAGGATCAGA+AGG 0.647016 8_1:-61804197 Msa1205480:CDS
TGAGTATGGGAAGAATGGTA+AGG 0.648957 8_1:-61801351 Msa1205480:CDS
ATATCCCATTTGCATTCGTG+GGG 0.649876 8_1:+61804536 None:intergenic
ATTACAGGCTAAATGGAAGG+AGG 0.652771 8_1:-61801777 Msa1205480:intron
GAAACCACGGTTGATACGTG+TGG 0.654330 8_1:-61804304 Msa1205480:CDS
GGGAGATTGAATTCCCGAAG+AGG 0.662042 8_1:-61804489 Msa1205480:CDS
CCCTCATGAAACTTACAGGG+TGG 0.674174 8_1:+61804583 None:intergenic
AACACATCAGAGCTAATCGG+CGG 0.691522 8_1:-61805350 Msa1205480:CDS
AGCACACGGCAAGAAAACAA+CGG 0.693474 8_1:+61801403 None:intergenic
GCTGAATCAGATAATAAGAG+GGG 0.694209 8_1:-61801692 Msa1205480:CDS
CTGAATCAGATAATAAGAGG+GGG 0.702623 8_1:-61801691 Msa1205480:CDS
TCGGGTTGTTGATAACCAAG+AGG 0.705979 8_1:-61804275 Msa1205480:CDS
TGAGTAAAGGTGATGCAATG+TGG 0.707299 8_1:-61804762 Msa1205480:CDS
AAATTTATGTAAAATTCACG+GGG 0.709300 8_1:+61801223 None:intergenic
AATGCTTTGAGAAAGGCTAG+TGG 0.716247 8_1:-61803950 Msa1205480:CDS
TGGTTGGGGCTACTGCACTG+AGG 0.758065 8_1:-61805139 Msa1205480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATAAATAAAATAATAA+GGG + chr8_1:61802917-61802936 None:intergenic 0.0%
!! TATATATAAATAAAATAATA+AGG + chr8_1:61802918-61802937 None:intergenic 0.0%
!! AAGAATAATGTTAGATTATT+AGG + chr8_1:61801071-61801090 None:intergenic 15.0%
!! ATTTGTAATATACACATAAT+TGG - chr8_1:61803757-61803776 Msa1205480:CDS 15.0%
!! GAATATCAAAATATTTAGAA+GGG + chr8_1:61804302-61804321 None:intergenic 15.0%
!! AGAATATCAAAATATTTAGA+AGG + chr8_1:61804303-61804322 None:intergenic 15.0%
!!! AGGTATTTTCTTATTAATAA+AGG - chr8_1:61804444-61804463 Msa1205480:CDS 15.0%
!!! CAAATTATTGTTTTTCTTTT+TGG + chr8_1:61804726-61804745 None:intergenic 15.0%
!!! TTCAATTTTTTGAATCGAAA+TGG - chr8_1:61801166-61801185 Msa1205480:three_prime_UTR 20.0%
!!! TCAATTTTTTGAATCGAAAT+GGG - chr8_1:61801167-61801186 Msa1205480:three_prime_UTR 20.0%
!!! TGAAACAAGTAATTTTCTTT+GGG + chr8_1:61803205-61803224 None:intergenic 20.0%
!!! TTGAAACAAGTAATTTTCTT+TGG + chr8_1:61803206-61803225 None:intergenic 20.0%
!! TAATTGGTATTTGATACTAA+AGG - chr8_1:61803773-61803792 Msa1205480:CDS 20.0%
!! TGTTAGATACAAAAACAAAT+AGG + chr8_1:61803923-61803942 None:intergenic 20.0%
!!! TATTTGTTTTTGTATCTAAC+AGG - chr8_1:61803922-61803941 Msa1205480:CDS 20.0%
!!! CACATGACTTATTTTTAAAT+TGG - chr8_1:61804196-61804215 Msa1205480:CDS 20.0%
!!! ATATCACTTTTTAGTGTATT+TGG - chr8_1:61804328-61804347 Msa1205480:CDS 20.0%
!! TTTATTAATCAGTACCATTA+GGG + chr8_1:61804502-61804521 None:intergenic 20.0%
!! ATTTATTAATCAGTACCATT+AGG + chr8_1:61804503-61804522 None:intergenic 20.0%
!! ATTTGAAAGATACGTATTAT+TGG + chr8_1:61804674-61804693 None:intergenic 20.0%
!! TAAGGATTATGCAAAATAAA+TGG + chr8_1:61804760-61804779 None:intergenic 20.0%
!! AAATTTATGTAAAATTCACG+GGG + chr8_1:61805337-61805356 None:intergenic 20.0%
!! CAAATTTATGTAAAATTCAC+GGG + chr8_1:61805338-61805357 None:intergenic 20.0%
!! GCAAATTTATGTAAAATTCA+CGG + chr8_1:61805339-61805358 None:intergenic 20.0%
!! ATAAATTTGCACTTACTTAT+TGG - chr8_1:61805349-61805368 Msa1205480:CDS 20.0%
!! TAAATTTGCACTTACTTATT+GGG - chr8_1:61805350-61805369 Msa1205480:CDS 20.0%
!! AAGAAATCCATCGAAATTTT+AGG - chr8_1:61801029-61801048 Msa1205480:three_prime_UTR 25.0%
! CATTATTCCTAAAATTTCGA+TGG + chr8_1:61801039-61801058 None:intergenic 25.0%
!! GAATATTTTGCATAATTCGT+TGG - chr8_1:61801589-61801608 Msa1205480:CDS 25.0%
!! GCGTTTTTGAATAGTAATAA+TGG - chr8_1:61801611-61801630 Msa1205480:CDS 25.0%
! CTTGAATCTTGATGAAAATT+TGG - chr8_1:61802336-61802355 Msa1205480:intron 25.0%
! GAGTATATTTCATCAGATAA+AGG - chr8_1:61802396-61802415 Msa1205480:intron 25.0%
! ATTTCATCAGATAAAGGATT+TGG - chr8_1:61802402-61802421 Msa1205480:intron 25.0%
! TTTGAAAGAGAAGATATTAG+AGG - chr8_1:61802831-61802850 Msa1205480:intron 25.0%
! CATAGAATGAGTTTATTGAT+CGG - chr8_1:61803002-61803021 Msa1205480:intron 25.0%
! TGAACTTTACATGTAGTTTA+CGG - chr8_1:61803110-61803129 Msa1205480:intron 25.0%
!! AATTGATCGTTTTGTCATAA+AGG - chr8_1:61803283-61803302 Msa1205480:intron 25.0%
!! ATTGATCGTTTTGTCATAAA+GGG - chr8_1:61803284-61803303 Msa1205480:intron 25.0%
! TCATTGAATGCATATCTAAT+TGG - chr8_1:61803315-61803334 Msa1205480:intron 25.0%
! CATTGAATGCATATCTAATT+GGG - chr8_1:61803316-61803335 Msa1205480:intron 25.0%
!!! AGTATTGACAAACAAAGATA+CGG + chr8_1:61803593-61803612 None:intergenic 25.0%
!! AACTCAAGTATTTAAAGTTC+AGG + chr8_1:61804268-61804287 None:intergenic 25.0%
! TATCAAAATATTTAGAAGGG+AGG + chr8_1:61804299-61804318 None:intergenic 25.0%
!! TATTTCATGGGTGTTTATTT+TGG - chr8_1:61804359-61804378 Msa1205480:CDS 25.0%
!!! AGCAAACAAGTTTTTTCATA+TGG + chr8_1:61804388-61804407 None:intergenic 25.0%
! ATACCTGTAGAATATAAGTT+AGG + chr8_1:61804430-61804449 None:intergenic 25.0%
! AGTCAACAAAAAGAAAATTC+AGG + chr8_1:61804609-61804628 None:intergenic 25.0%
! TTTGCATAATCCTTAATTAC+AGG - chr8_1:61804765-61804784 Msa1205480:CDS 25.0%
! AGAATGCATTATATGTATGA+AGG - chr8_1:61805122-61805141 Msa1205480:CDS 25.0%
! ATAGATATATTTCAGTGACT+TGG - chr8_1:61805302-61805321 Msa1205480:CDS 25.0%
! TAGATATATTTCAGTGACTT+GGG - chr8_1:61805303-61805322 Msa1205480:CDS 25.0%
!!! CAACTTCTTATTTTCAAACA+AGG + chr8_1:61805509-61805528 None:intergenic 25.0%
! CTTGTTTGAAAATAAGAAGT+TGG - chr8_1:61805507-61805526 Msa1205480:five_prime_UTR 25.0%
! ATCTTTGATTTCCGATGAAT+CGG + chr8_1:61801273-61801292 None:intergenic 30.0%
! GGAGATTTTGTTGAAGAATT+TGG - chr8_1:61801451-61801470 Msa1205480:CDS 30.0%
! TTTGGGTTATGATGAAGATA+CGG - chr8_1:61801511-61801530 Msa1205480:CDS 30.0%
AGTAATAATGGTGCTTATGT+TGG - chr8_1:61801623-61801642 Msa1205480:CDS 30.0%
TAATGAGTGATCTTCATGTT+GGG - chr8_1:61801825-61801844 Msa1205480:intron 30.0%
! TGATGAAAATTTGGAGTTTG+TGG - chr8_1:61802345-61802364 Msa1205480:intron 30.0%
GATAAAGGATTTGGAAAAAC+AGG - chr8_1:61802411-61802430 Msa1205480:intron 30.0%
TTTCCCTTTCTTCAATTTCT+GGG + chr8_1:61802542-61802561 None:intergenic 30.0%
!! TATTTTCTGTTCCTTTTTCG+TGG + chr8_1:61802965-61802984 None:intergenic 30.0%
AAAATGAGTCACACAGATTA+TGG + chr8_1:61803069-61803088 None:intergenic 30.0%
TTTGCACATTGAATTCCATT+TGG - chr8_1:61803086-61803105 Msa1205480:intron 30.0%
ACATGTAAAGTTCAACCAAA+TGG + chr8_1:61803104-61803123 None:intergenic 30.0%
TTCAAAATCAGACATCAACA+TGG - chr8_1:61803221-61803240 Msa1205480:intron 30.0%
AAATTACCAGTATGCATCAA+AGG + chr8_1:61803430-61803449 None:intergenic 30.0%
GCACACTAATTCAAATTCTA+TGG - chr8_1:61803546-61803565 Msa1205480:intron 30.0%
! TTAGCAGCTGTATCATATTT+TGG + chr8_1:61803681-61803700 None:intergenic 30.0%
ATTCACATTGCATCTATCTT+TGG + chr8_1:61803728-61803747 None:intergenic 30.0%
TCCATGCAATTGTAATCTTA+TGG - chr8_1:61803897-61803916 Msa1205480:CDS 30.0%
! TTTTTGTATCTAACAGGTAG+AGG - chr8_1:61803928-61803947 Msa1205480:CDS 30.0%
AGCGGAAATAAGAGAATTTA+AGG - chr8_1:61804126-61804145 Msa1205480:CDS 30.0%
! TATTTAAAGTTCAGGTCCTA+CGG + chr8_1:61804260-61804279 None:intergenic 30.0%
GATCCTAACTTATATTCTAC+AGG - chr8_1:61804424-61804443 Msa1205480:CDS 30.0%
ATCATTGCTAACAAAATCAC+AGG + chr8_1:61804639-61804658 None:intergenic 30.0%
ATCCTTAATTACAGGCTAAA+TGG - chr8_1:61804773-61804792 Msa1205480:CDS 30.0%
TTCCATTTAGCCTGTAATTA+AGG + chr8_1:61804778-61804797 None:intergenic 30.0%
TTAATTACAGGCTAAATGGA+AGG - chr8_1:61804777-61804796 Msa1205480:CDS 30.0%
AGCTGAATCAGATAATAAGA+GGG - chr8_1:61804864-61804883 Msa1205480:CDS 30.0%
!! CTTATTTTCAAACAAGGCAA+CGG + chr8_1:61805503-61805522 None:intergenic 30.0%
!! TTGAATCGAAATGGGTTGTA+CGG - chr8_1:61801175-61801194 Msa1205480:three_prime_UTR 35.0%
AGAAACACATCAGAGCTAAT+CGG - chr8_1:61801204-61801223 Msa1205480:three_prime_UTR 35.0%
AAAACCTGATTCCGATTCAT+CGG - chr8_1:61801259-61801278 Msa1205480:three_prime_UTR 35.0%
CGAGAAAGATCGTATTTGAA+GGG + chr8_1:61801332-61801351 None:intergenic 35.0%
ACGAGAAAGATCGTATTTGA+AGG + chr8_1:61801333-61801352 None:intergenic 35.0%
TCAGAATTAGGGTTTGGATT+GGG + chr8_1:61801392-61801411 None:intergenic 35.0%
ATCAGAATTAGGGTTTGGAT+TGG + chr8_1:61801393-61801412 None:intergenic 35.0%
AACCAGGTTCATCAGAATTA+GGG + chr8_1:61801403-61801422 None:intergenic 35.0%
TAATTCTGATGAACCTGGTT+GGG - chr8_1:61801403-61801422 Msa1205480:CDS 35.0%
! TGTTTCGAAGATTGTTGCTT+TGG - chr8_1:61801493-61801512 Msa1205480:CDS 35.0%
!! GTTTCGAAGATTGTTGCTTT+GGG - chr8_1:61801494-61801513 Msa1205480:CDS 35.0%
!! TATGTTGGTGTTGGTGTTAA+TGG - chr8_1:61801638-61801657 Msa1205480:CDS 35.0%
!! TTTCGCTGATTTGAAGCATT+TGG - chr8_1:61801718-61801737 Msa1205480:CDS 35.0%
GCATCACCTTTACTCAAATT+CGG + chr8_1:61801791-61801810 None:intergenic 35.0%
CTAATGAGTGATCTTCATGT+TGG - chr8_1:61801824-61801843 Msa1205480:intron 35.0%
AATATCCCATTTGCATTCGT+GGG + chr8_1:61802025-61802044 None:intergenic 35.0%
TGACTGAGCTCAAAACATTA+CGG - chr8_1:61802500-61802519 Msa1205480:intron 35.0%
AGACCCAGAAATTGAAGAAA+GGG - chr8_1:61802536-61802555 Msa1205480:intron 35.0%
GTTTCCCTTTCTTCAATTTC+TGG + chr8_1:61802543-61802562 None:intergenic 35.0%
GAAATTGAAGAAAGGGAAAC+AGG - chr8_1:61802543-61802562 Msa1205480:intron 35.0%
CAAATTAAGTGCATCAGAGT+CGG - chr8_1:61802708-61802727 Msa1205480:intron 35.0%
! ACTTGAAGAAACTTCTAGCT+TGG - chr8_1:61802770-61802789 Msa1205480:intron 35.0%
!! CTTGAAGAAACTTCTAGCTT+GGG - chr8_1:61802771-61802790 Msa1205480:intron 35.0%
AAACTGTGTCACACTAGTAT+AGG + chr8_1:61803247-61803266 None:intergenic 35.0%
AAGGCACGAAAAAGAAGAAA+AGG + chr8_1:61803411-61803430 None:intergenic 35.0%
AACTGAGCCATTGTTTCATA+CGG - chr8_1:61803484-61803503 Msa1205480:intron 35.0%
TTATGTGCCGTATGAAACAA+TGG + chr8_1:61803494-61803513 None:intergenic 35.0%
TTGAAGTTTGTGTCAAGACA+TGG - chr8_1:61803514-61803533 Msa1205480:intron 35.0%
TGAAGTTTGTGTCAAGACAT+GGG - chr8_1:61803515-61803534 Msa1205480:intron 35.0%
! TGCATCTATCTTTGGTGTAA+TGG + chr8_1:61803720-61803739 None:intergenic 35.0%
CTCAAGTACTTCTTGATTCT+CGG - chr8_1:61803842-61803861 Msa1205480:CDS 35.0%
AGATTACAATTGCATGGAAG+AGG + chr8_1:61803895-61803914 None:intergenic 35.0%
GCCATAAGATTACAATTGCA+TGG + chr8_1:61803901-61803920 None:intergenic 35.0%
ATTTCCCTTATAGGGAAACT+AGG + chr8_1:61804063-61804082 None:intergenic 35.0%
TTTCCCTATAAGGGAAATAG+CGG - chr8_1:61804065-61804084 Msa1205480:CDS 35.0%
TTTGGTTGCTGCATATTTCA+TGG - chr8_1:61804346-61804365 Msa1205480:CDS 35.0%
TTGGTTGCTGCATATTTCAT+GGG - chr8_1:61804347-61804366 Msa1205480:CDS 35.0%
CAGCTGAATCAGATAATAAG+AGG - chr8_1:61804863-61804882 Msa1205480:CDS 35.0%
GCTGAATCAGATAATAAGAG+GGG - chr8_1:61804865-61804884 Msa1205480:CDS 35.0%
CTGAATCAGATAATAAGAGG+GGG - chr8_1:61804866-61804885 Msa1205480:CDS 35.0%
!! CTTTGATGGGTGAAGTATTT+TGG + chr8_1:61805011-61805030 None:intergenic 35.0%
TTAGCAATTGTCTCTCTTTG+AGG + chr8_1:61805051-61805070 None:intergenic 35.0%
CTAAATGCAGTGATGAGTAT+GGG - chr8_1:61805193-61805212 Msa1205480:CDS 35.0%
TTCTCTGTTGGATTTGAACT+CGG + chr8_1:61805248-61805267 None:intergenic 35.0%
AACAGAGAATCCGTGTATTT+GGG - chr8_1:61805259-61805278 Msa1205480:CDS 35.0%
AACAAAACTCCTATGCAATC+TGG + chr8_1:61805396-61805415 None:intergenic 35.0%
ATTTCCGATGAATCGGAATC+AGG + chr8_1:61801266-61801285 None:intergenic 40.0%
TGCGATTTCGAAATCCATAG+AGG - chr8_1:61801292-61801311 Msa1205480:CDS 40.0%
TCGAAATCCATAGAGGAATC+AGG - chr8_1:61801299-61801318 Msa1205480:CDS 40.0%
GATCGTATTTGAAGGGTTTG+AGG + chr8_1:61801325-61801344 None:intergenic 40.0%
CAAATACGATCTTTCTCGTG+TGG - chr8_1:61801334-61801353 Msa1205480:CDS 40.0%
! TAGGGTTTGGATTGGGAATA+GGG + chr8_1:61801385-61801404 None:intergenic 40.0%
! TTAGGGTTTGGATTGGGAAT+AGG + chr8_1:61801386-61801405 None:intergenic 40.0%
GGTTCATCAGAATTAGGGTT+TGG + chr8_1:61801398-61801417 None:intergenic 40.0%
AACCCTAATTCTGATGAACC+TGG - chr8_1:61801398-61801417 Msa1205480:CDS 40.0%
CAACCAGGTTCATCAGAATT+AGG + chr8_1:61801404-61801423 None:intergenic 40.0%
CTAATTCTGATGAACCTGGT+TGG - chr8_1:61801402-61801421 Msa1205480:CDS 40.0%
AATTCTGATGAACCTGGTTG+GGG - chr8_1:61801404-61801423 Msa1205480:CDS 40.0%
!!! TTGAAAGCGGTTTTGAGGAA+TGG - chr8_1:61801536-61801555 Msa1205480:CDS 40.0%
!!! TGAAAGCGGTTTTGAGGAAT+GGG - chr8_1:61801537-61801556 Msa1205480:CDS 40.0%
! TTGAGGAATGGGCATTGTTA+TGG - chr8_1:61801548-61801567 Msa1205480:CDS 40.0%
AATGGTGCTTATGTTGGTGT+TGG - chr8_1:61801629-61801648 Msa1205480:CDS 40.0%
GAATATGGATGAGCTTGAAC+CGG - chr8_1:61801694-61801713 Msa1205480:CDS 40.0%
TGCTTCAAATCAGCGAAAAC+CGG + chr8_1:61801716-61801735 None:intergenic 40.0%
!! GCATTTGGAGGAGTATTCTT+TGG - chr8_1:61801733-61801752 Msa1205480:CDS 40.0%
! TGTGTTTGTTGCAACAGGTT+AGG - chr8_1:61801765-61801784 Msa1205480:CDS 40.0%
GTTAGGCCGAATTTGAGTAA+AGG - chr8_1:61801782-61801801 Msa1205480:intron 40.0%
TGAGTAAAGGTGATGCAATG+TGG - chr8_1:61801795-61801814 Msa1205480:intron 40.0%
ATTACCCCACGAATGCAAAT+GGG - chr8_1:61802017-61802036 Msa1205480:intron 40.0%
ATATCCCATTTGCATTCGTG+GGG + chr8_1:61802024-61802043 None:intergenic 40.0%
CAATATCCCATTTGCATTCG+TGG + chr8_1:61802026-61802045 None:intergenic 40.0%
GAGAAAGATCAAACCTCTTC+GGG + chr8_1:61802084-61802103 None:intergenic 40.0%
GGAGAAAGATCAAACCTCTT+CGG + chr8_1:61802085-61802104 None:intergenic 40.0%
TTCAACAAGCACTTCATTGG+CGG + chr8_1:61802106-61802125 None:intergenic 40.0%
CTCTTCAACAAGCACTTCAT+TGG + chr8_1:61802109-61802128 None:intergenic 40.0%
! TCTAAAACCAGCAGCAAACA+TGG + chr8_1:61802140-61802159 None:intergenic 40.0%
TGTGTCGAATTTGGATTCTC+CGG - chr8_1:61802216-61802235 Msa1205480:intron 40.0%
! AAATTTGGAGTTTGTGGCTG+AGG - chr8_1:61802351-61802370 Msa1205480:intron 40.0%
TGAGCTCAAAACATTACGGA+TGG - chr8_1:61802504-61802523 Msa1205480:intron 40.0%
AACATTACGGATGGATAGAG+AGG - chr8_1:61802513-61802532 Msa1205480:intron 40.0%
GAGACCCAGAAATTGAAGAA+AGG - chr8_1:61802535-61802554 Msa1205480:intron 40.0%
!! GATGGAGAATGCTTTGAGAA+AGG - chr8_1:61802600-61802619 Msa1205480:intron 40.0%
!! AATGCTTTGAGAAAGGCTAG+TGG - chr8_1:61802607-61802626 Msa1205480:intron 40.0%
! CTCTGATGCACTTAATTTGG+AGG + chr8_1:61802707-61802726 None:intergenic 40.0%
CGACTCTGATGCACTTAATT+TGG + chr8_1:61802710-61802729 None:intergenic 40.0%
ACAGAAAGCTAAGCTGCAAA+AGG - chr8_1:61802798-61802817 Msa1205480:intron 40.0%
GTTTACGGCTTGAAACAAGT+AGG - chr8_1:61803125-61803144 Msa1205480:intron 40.0%
ACAAGTAGGAGTTTAAGTCC+TGG - chr8_1:61803139-61803158 Msa1205480:intron 40.0%
CAAGTAGGAGTTTAAGTCCT+GGG - chr8_1:61803140-61803159 Msa1205480:intron 40.0%
ACTAATCCCTGTTTGGGAAT+TGG + chr8_1:61803171-61803190 None:intergenic 40.0%
! ATTTTCTTTGGGTGAGACTG+TGG + chr8_1:61803194-61803213 None:intergenic 40.0%
TGAACCATGTATGCATAGCT+TGG - chr8_1:61803455-61803474 Msa1205480:intron 40.0%
GAAGTTTGTGTCAAGACATG+GGG - chr8_1:61803516-61803535 Msa1205480:intron 40.0%
AAGTTTGTGTCAAGACATGG+GGG - chr8_1:61803517-61803536 Msa1205480:intron 40.0%
CATTCTGCCATGAACTATTC+TGG + chr8_1:61803640-61803659 None:intergenic 40.0%
GAATAGTTCATGGCAGAATG+TGG - chr8_1:61803640-61803659 Msa1205480:intron 40.0%
ACTGTCCTAGTTTCCCTATA+AGG - chr8_1:61804055-61804074 Msa1205480:CDS 40.0%
CTGTCCTAGTTTCCCTATAA+GGG - chr8_1:61804056-61804075 Msa1205480:CDS 40.0%
ATTGCTACTATGTTCACCGT+AGG - chr8_1:61804241-61804260 Msa1205480:CDS 40.0%
AGTGCTAATCAATGCCCTAA+TGG - chr8_1:61804485-61804504 Msa1205480:CDS 40.0%
ATTACAGGCTAAATGGAAGG+AGG - chr8_1:61804780-61804799 Msa1205480:CDS 40.0%
TAAATGGAAGGAGGAGTTGA+AGG - chr8_1:61804789-61804808 Msa1205480:CDS 40.0%
AGATAATAAGAGGGGGTTTG+AGG - chr8_1:61804873-61804892 Msa1205480:CDS 40.0%
CAGATCGAACAGATGCTTTA+AGG + chr8_1:61804975-61804994 None:intergenic 40.0%
TTCACCCATCAAAGACTTTG+AGG - chr8_1:61805017-61805036 Msa1205480:CDS 40.0%
TCACCCATCAAAGACTTTGA+GGG - chr8_1:61805018-61805037 Msa1205480:CDS 40.0%
GTACCCTCAAAGTCTTTGAT+GGG + chr8_1:61805024-61805043 None:intergenic 40.0%
TGTACCCTCAAAGTCTTTGA+TGG + chr8_1:61805025-61805044 None:intergenic 40.0%
TGCATTTAGCACACATGACT+TGG + chr8_1:61805182-61805201 None:intergenic 40.0%
GCTAAATGCAGTGATGAGTA+TGG - chr8_1:61805192-61805211 Msa1205480:CDS 40.0%
AGTGATGAGTATGGGAAGAA+TGG - chr8_1:61805201-61805220 Msa1205480:CDS 40.0%
TGAGTATGGGAAGAATGGTA+AGG - chr8_1:61805206-61805225 Msa1205480:CDS 40.0%
CAAATACACGGATTCTCTGT+TGG + chr8_1:61805260-61805279 None:intergenic 40.0%
CAACAGAGAATCCGTGTATT+TGG - chr8_1:61805258-61805277 Msa1205480:CDS 40.0%
ACAGAGAATCCGTGTATTTG+GGG - chr8_1:61805260-61805279 Msa1205480:CDS 40.0%
!!! TGCATAGGAGTTTTGTTCGT+AGG - chr8_1:61805399-61805418 Msa1205480:five_prime_UTR 40.0%
AACACATCAGAGCTAATCGG+CGG - chr8_1:61801207-61801226 Msa1205480:three_prime_UTR 45.0%
! TTTGAGGCCTGATTCCTCTA+TGG + chr8_1:61801309-61801328 None:intergenic 45.0%
! TGAAGATACGGCGTTGAAAG+CGG - chr8_1:61801523-61801542 Msa1205480:CDS 45.0%
! AGGAATGGGCATTGTTATGG+TGG - chr8_1:61801551-61801570 Msa1205480:CDS 45.0%
! GGAATGGGCATTGTTATGGT+GGG - chr8_1:61801552-61801571 Msa1205480:CDS 45.0%
!! GTTAATGGTGCTGTTTGTGC+TGG - chr8_1:61801653-61801672 Msa1205480:CDS 45.0%
!! CGCTGATTTGAAGCATTTGG+AGG - chr8_1:61801721-61801740 Msa1205480:CDS 45.0%
!! TTGGAGGAGTATTCTTTGGC+TGG - chr8_1:61801737-61801756 Msa1205480:CDS 45.0%
!! TGGAGGAGTATTCTTTGGCT+GGG - chr8_1:61801738-61801757 Msa1205480:CDS 45.0%
! GATGGTGTGTTTGTTGCAAC+AGG - chr8_1:61801760-61801779 Msa1205480:CDS 45.0%
ACTATAGAGATTCCTGTGCC+TGG - chr8_1:61801857-61801876 Msa1205480:intron 45.0%
CTATAGAGATTCCTGTGCCT+GGG - chr8_1:61801858-61801877 Msa1205480:intron 45.0%
TGGTAAGGCTCGTACTAAAC+CGG - chr8_1:61801934-61801953 Msa1205480:intron 45.0%
GTACTAAACCGGTTGCTCAT+AGG - chr8_1:61801945-61801964 Msa1205480:intron 45.0%
GGAAAAGACCTATGAGCAAC+CGG + chr8_1:61801956-61801975 None:intergenic 45.0%
TCCACCCTGTAAGTTTCATG+AGG - chr8_1:61801973-61801992 Msa1205480:intron 45.0%
CCACCCTGTAAGTTTCATGA+GGG - chr8_1:61801974-61801993 Msa1205480:intron 45.0%
CACCCTGTAAGTTTCATGAG+GGG - chr8_1:61801975-61801994 Msa1205480:intron 45.0%
CACCCCTCATGAAACTTACA+GGG + chr8_1:61801980-61801999 None:intergenic 45.0%
CTGTAAGTTTCATGAGGGGT+GGG - chr8_1:61801979-61801998 Msa1205480:intron 45.0%
TGTAAGTTTCATGAGGGGTG+GGG - chr8_1:61801980-61801999 Msa1205480:intron 45.0%
GATTACCCCACGAATGCAAA+TGG - chr8_1:61802016-61802035 Msa1205480:intron 45.0%
TGGGATATTGTCTTGTGCTC+CGG - chr8_1:61802036-61802055 Msa1205480:intron 45.0%
TCAATCTCCCTCTGCAAAAC+CGG + chr8_1:61802058-61802077 None:intergenic 45.0%
! AATGTTGCCATGTTTGCTGC+TGG - chr8_1:61802130-61802149 Msa1205480:intron 45.0%
AGCAAACACCAAGCAATTGC+AGG - chr8_1:61802159-61802178 Msa1205480:intron 45.0%
TCGTAGTGCTGTGTCGAATT+TGG - chr8_1:61802207-61802226 Msa1205480:intron 45.0%
TTGGATTCTCCGGTTGTATC+TGG - chr8_1:61802226-61802245 Msa1205480:intron 45.0%
TGGATTCTCCGGTTGTATCT+GGG - chr8_1:61802227-61802246 Msa1205480:intron 45.0%
TTGATACGTGTGGACACTCT+CGG - chr8_1:61802263-61802282 Msa1205480:intron 45.0%
!! TCGGGTTGTTGATAACCAAG+AGG - chr8_1:61802282-61802301 Msa1205480:intron 45.0%
TAACCAAGAGGCTGTGAACT+CGG - chr8_1:61802294-61802313 Msa1205480:intron 45.0%
GGATTTGGAAAAACAGGCCA+AGG - chr8_1:61802417-61802436 Msa1205480:intron 45.0%
!! GGCTTATCAGAAAGCATTGC+AGG - chr8_1:61802453-61802472 Msa1205480:intron 45.0%
CACAACCATGAAGAGACTCT+CGG - chr8_1:61802576-61802595 Msa1205480:intron 45.0%
TTCTCACAGCTCCATTTGCA+CGG + chr8_1:61802642-61802661 None:intergenic 45.0%
TGCTGAAATCAGAGCAGAGA+TGG - chr8_1:61802678-61802697 Msa1205480:intron 45.0%
TGAAATCAGAGCAGAGATGG+AGG - chr8_1:61802681-61802700 Msa1205480:intron 45.0%
! AGAGAACCTCGGCTTCTTTT+TGG + chr8_1:61802888-61802907 None:intergenic 45.0%
!! CCTTTTTCGTGGTTTGTGTG+TGG + chr8_1:61802954-61802973 None:intergenic 45.0%
CCACACACAAACCACGAAAA+AGG - chr8_1:61802951-61802970 Msa1205480:intron 45.0%
! CTGTGGACTAATCCCTGTTT+GGG + chr8_1:61803177-61803196 None:intergenic 45.0%
! ACTGTGGACTAATCCCTGTT+TGG + chr8_1:61803178-61803197 None:intergenic 45.0%
TTCGTGCCTTTGATGCATAC+TGG - chr8_1:61803421-61803440 Msa1205480:intron 45.0%
GTCTCCAAGCTATGCATACA+TGG + chr8_1:61803462-61803481 None:intergenic 45.0%
! TGTCAAGACATGGGGGTATA+CGG - chr8_1:61803524-61803543 Msa1205480:intron 45.0%
GCACACACCAGAATAGTTCA+TGG - chr8_1:61803630-61803649 Msa1205480:intron 45.0%
! ATGTGTCTTGACTCGAGTAC+TGG + chr8_1:61803802-61803821 None:intergenic 45.0%
CTTGATTCTCGGCTTCTTCT+TGG - chr8_1:61803853-61803872 Msa1205480:CDS 45.0%
AATTCTTTAGCCAATGCCCC+TGG - chr8_1:61804550-61804569 Msa1205480:CDS 45.0%
ATTCTTTAGCCAATGCCCCT+GGG - chr8_1:61804551-61804570 Msa1205480:CDS 45.0%
ATTCAGCTGCTTCCTTGGAA+CGG + chr8_1:61804852-61804871 None:intergenic 45.0%
ATCTGATTCAGCTGCTTCCT+TGG + chr8_1:61804857-61804876 None:intergenic 45.0%
ATTAGATTTCCAGCGCCACA+AGG - chr8_1:61804915-61804934 Msa1205480:CDS 45.0%
GTCTGCTTAGATCATCCTTG+TGG + chr8_1:61804933-61804952 None:intergenic 45.0%
GACAATTGCTAAGCTGCTTC+TGG - chr8_1:61805059-61805078 Msa1205480:CDS 45.0%
TGCTAAGCTGCTTCTGGATT+TGG - chr8_1:61805065-61805084 Msa1205480:CDS 45.0%
AGCACACGGCAAGAAAACAA+CGG + chr8_1:61805157-61805176 None:intergenic 45.0%
CCTATGCAATCTGGAGAACA+GGG + chr8_1:61805387-61805406 None:intergenic 45.0%
TCCTATGCAATCTGGAGAAC+AGG + chr8_1:61805388-61805407 None:intergenic 45.0%
!! TATATAAATAAAATAATAAG+GGG + chr8_1:61802916-61802935 None:intergenic 5.0%
CTACTGCACTGAGGAGCAAT+TGG - chr8_1:61801427-61801446 Msa1205480:CDS 50.0%
! TGGGCATTGTTATGGTGGGA+TGG - chr8_1:61801556-61801575 Msa1205480:CDS 50.0%
!!! TTGTGCTGGTTTTGCTCGTG+AGG - chr8_1:61801667-61801686 Msa1205480:CDS 50.0%
!!! TGTGCTGGTTTTGCTCGTGA+GGG - chr8_1:61801668-61801687 Msa1205480:CDS 50.0%
TGCTCGTGAGGGTGAGAATA+TGG - chr8_1:61801679-61801698 Msa1205480:CDS 50.0%
! GGAGTATTCTTTGGCTGGGA+TGG - chr8_1:61801742-61801761 Msa1205480:CDS 50.0%
GGAGCTGCTGTTGTTGAATC+TGG - chr8_1:61801902-61801921 Msa1205480:intron 50.0%
GCTGCTGTTGTTGAATCTGG+TGG - chr8_1:61801905-61801924 Msa1205480:intron 50.0%
GCTGTTGTTGAATCTGGTGG+TGG - chr8_1:61801908-61801927 Msa1205480:intron 50.0%
!! GTTGTTGAATCTGGTGGTGG+TGG - chr8_1:61801911-61801930 Msa1205480:intron 50.0%
CCCTCATGAAACTTACAGGG+TGG + chr8_1:61801977-61801996 None:intergenic 50.0%
CCACCCCTCATGAAACTTAC+AGG + chr8_1:61801981-61802000 None:intergenic 50.0%
CCTGTAAGTTTCATGAGGGG+TGG - chr8_1:61801978-61801997 Msa1205480:intron 50.0%
TTTCATGAGGGGTGGGGATT+TGG - chr8_1:61801986-61802005 Msa1205480:intron 50.0%
AGGGGTGGGGATTTGGAAAT+GGG - chr8_1:61801993-61802012 Msa1205480:intron 50.0%
! TTGTGCTCCGGTTTTGCAGA+GGG - chr8_1:61802048-61802067 Msa1205480:intron 50.0%
GGGAGATTGAATTCCCGAAG+AGG - chr8_1:61802068-61802087 Msa1205480:intron 50.0%
ACCAAGCAATTGCAGGCGAA+GGG - chr8_1:61802166-61802185 Msa1205480:intron 50.0%
AGCACTACGACCAGGAACAT+TGG + chr8_1:61802197-61802216 None:intergenic 50.0%
GGATTCTCCGGTTGTATCTG+GGG - chr8_1:61802228-61802247 Msa1205480:intron 50.0%
GTTTCAGCCCCAGATACAAC+CGG + chr8_1:61802238-61802257 None:intergenic 50.0%
! TGTATCTGGGGCTGAAACCA+CGG - chr8_1:61802240-61802259 Msa1205480:intron 50.0%
! GAAACCACGGTTGATACGTG+TGG - chr8_1:61802253-61802272 Msa1205480:intron 50.0%
TGATACGTGTGGACACTCTC+GGG - chr8_1:61802264-61802283 Msa1205480:intron 50.0%
GTTTGTGGCTGAGGATCAGA+AGG - chr8_1:61802360-61802379 Msa1205480:intron 50.0%
TGGAAAAACAGGCCAAGGAG+CGG - chr8_1:61802422-61802441 Msa1205480:intron 50.0%
GAAAGGGAAACAGGCACTTG+AGG - chr8_1:61802552-61802571 Msa1205480:intron 50.0%
CATCTCCGAGAGTCTCTTCA+TGG + chr8_1:61802584-61802603 None:intergenic 50.0%
CATGAAGAGACTCTCGGAGA+TGG - chr8_1:61802582-61802601 Msa1205480:intron 50.0%
GAGAAAGGCTAGTGGTCAAG+TGG - chr8_1:61802615-61802634 Msa1205480:intron 50.0%
GCCAAGCCAATTCCCAAACA+GGG - chr8_1:61803162-61803181 Msa1205480:intron 50.0%
TCCCTGTTTGGGAATTGGCT+TGG + chr8_1:61803166-61803185 None:intergenic 50.0%
! CGGCCGCTATTTCCCTTATA+GGG + chr8_1:61804071-61804090 None:intergenic 50.0%
AGCACATGTAGCGGCAATAG+CGG - chr8_1:61804108-61804127 Msa1205480:CDS 50.0%
TCTTGCTAACCAATGCCCAG+GGG + chr8_1:61804569-61804588 None:intergenic 50.0%
GTCTTGCTAACCAATGCCCA+GGG + chr8_1:61804570-61804589 None:intergenic 50.0%
AGTCTTGCTAACCAATGCCC+AGG + chr8_1:61804571-61804590 None:intergenic 50.0%
GAAGGCTCAAGAAGATGCCT+TGG - chr8_1:61804807-61804826 Msa1205480:CDS 50.0%
TTAGATCATCCTTGTGGCGC+TGG + chr8_1:61804927-61804946 None:intergenic 50.0%
!! CACATGACTTGGTGAGCACA+CGG + chr8_1:61805171-61805190 None:intergenic 50.0%
TGGATTTGAACTCGGCAGCA+AGG + chr8_1:61805240-61805259 None:intergenic 50.0%
ACGAGCATGCCCCAAATACA+CGG + chr8_1:61805272-61805291 None:intergenic 50.0%
CCCTGTTCTCCAGATTGCAT+AGG - chr8_1:61805384-61805403 Msa1205480:exon 50.0%
TAATCGGCGGCCACGATCAA+CGG - chr8_1:61801220-61801239 Msa1205480:three_prime_UTR 55.0%
CTGCACTGAGGAGCAATTGG+AGG - chr8_1:61801430-61801449 Msa1205480:CDS 55.0%
!! CGGCGTTGAAAGCGGTTTTG+AGG - chr8_1:61801531-61801550 Msa1205480:CDS 55.0%
!! GTTGAATCTGGTGGTGGTGG+TGG - chr8_1:61801914-61801933 Msa1205480:intron 55.0%
!! ATCTGGTGGTGGTGGTGGTA+AGG - chr8_1:61801919-61801938 Msa1205480:intron 55.0%
GAGGGGTGGGGATTTGGAAA+TGG - chr8_1:61801992-61802011 Msa1205480:intron 55.0%
GGGGTGGGGATTTGGAAATG+GGG - chr8_1:61801994-61802013 Msa1205480:intron 55.0%
! CTTGTGCTCCGGTTTTGCAG+AGG - chr8_1:61802047-61802066 Msa1205480:intron 55.0%
CACCAAGCAATTGCAGGCGA+AGG - chr8_1:61802165-61802184 Msa1205480:intron 55.0%
CCAAGCAATTGCAGGCGAAG+GGG - chr8_1:61802167-61802186 Msa1205480:intron 55.0%
AAGGGGAAGGCCAATGTTCC+TGG - chr8_1:61802184-61802203 Msa1205480:intron 55.0%
TTCGACACAGCACTACGACC+AGG + chr8_1:61802205-61802224 None:intergenic 55.0%
GTGTCCACACGTATCAACCG+TGG + chr8_1:61802260-61802279 None:intergenic 55.0%
AGGCCAAGGAGCGGAAAGAA+TGG - chr8_1:61802431-61802450 Msa1205480:intron 55.0%
GGCCAAGGAGCGGAAAGAAT+GGG - chr8_1:61802432-61802451 Msa1205480:intron 55.0%
AGCCCATTCTTTCCGCTCCT+TGG + chr8_1:61802437-61802456 None:intergenic 55.0%
GGTCAAGTGGACCGTGCAAA+TGG - chr8_1:61802628-61802647 Msa1205480:intron 55.0%
AAGGGGCGAAGAGAGAACCT+CGG + chr8_1:61802899-61802918 None:intergenic 55.0%
!! TTTGGGAATTGGCTTGGCCC+AGG + chr8_1:61803160-61803179 None:intergenic 55.0%
GGCCAAGCCAATTCCCAAAC+AGG - chr8_1:61803161-61803180 Msa1205480:intron 55.0%
! GCGGCCGCTATTTCCCTTAT+AGG + chr8_1:61804072-61804091 None:intergenic 55.0%
! GCTAGCCTGAGCTGGAATAG+CGG + chr8_1:61804091-61804110 None:intergenic 55.0%
! CTACATGTGCTAGCCTGAGC+TGG + chr8_1:61804099-61804118 None:intergenic 55.0%
GCTCAGGCTAGCACATGTAG+CGG - chr8_1:61804099-61804118 Msa1205480:CDS 55.0%
! TAACCAATGCCCAGGGGCAT+TGG + chr8_1:61804563-61804582 None:intergenic 55.0%
TGCCTTGGCACTCGTTGAAG+AGG - chr8_1:61804822-61804841 Msa1205480:CDS 55.0%
CTCCTCTTCAACGAGTGCCA+AGG + chr8_1:61804827-61804846 None:intergenic 55.0%
TCAGTGCAGTAGCCCCAACC+AGG + chr8_1:61801419-61801438 None:intergenic 60.0%
TGGTTGGGGCTACTGCACTG+AGG - chr8_1:61801418-61801437 Msa1205480:CDS 60.0%
CCCCTTCGCCTGCAATTGCT+TGG + chr8_1:61802170-61802189 None:intergenic 60.0%
GCAATTGCAGGCGAAGGGGA+AGG - chr8_1:61802171-61802190 Msa1205480:intron 60.0%
GCACCGAGTTCACAGCCTCT+TGG + chr8_1:61802300-61802319 None:intergenic 60.0%
GCAGCGCCAAAAAGAAGCCG+AGG - chr8_1:61802879-61802898 Msa1205480:intron 60.0%
TAGCCAATGCCCCTGGGCAT+TGG - chr8_1:61804557-61804576 Msa1205480:CDS 60.0%
!! TGAAGAGGAGCGCCGTTCCA+AGG - chr8_1:61804837-61804856 Msa1205480:CDS 60.0%
! TGTGCCTGGGAGTGCGAGTG+CGG - chr8_1:61801871-61801890 Msa1205480:intron 65.0%
AGCGGCCGCTATTCCAGCTC+AGG - chr8_1:61804083-61804102 Msa1205480:CDS 65.0%
GCGGCCACGATCAACGGCGA+CGG - chr8_1:61801226-61801245 Msa1205480:three_prime_UTR 70.0%
GCCACGATCAACGGCGACGG+CGG - chr8_1:61801229-61801248 Msa1205480:three_prime_UTR 70.0%
ACGATCAACGGCGACGGCGG+CGG - chr8_1:61801232-61801251 Msa1205480:three_prime_UTR 70.0%
GCACTCGCACTCCCAGGCAC+AGG + chr8_1:61801872-61801891 None:intergenic 70.0%
! GTGCCTGGGAGTGCGAGTGC+GGG - chr8_1:61801872-61801891 Msa1205480:intron 70.0%
GAGTGCGAGTGCGGGTGCGA+GGG - chr8_1:61801880-61801899 Msa1205480:intron 70.0%
AGTGCGAGTGCGGGTGCGAG+GGG - chr8_1:61801881-61801900 Msa1205480:intron 70.0%
GCCGCCGTCGCCGTTGATCG+TGG + chr8_1:61801233-61801252 None:intergenic 75.0%
ATCAACGGCGACGGCGGCGG+CGG - chr8_1:61801235-61801254 Msa1205480:three_prime_UTR 75.0%
GCACCCGCACTCGCACTCCC+AGG + chr8_1:61801878-61801897 None:intergenic 75.0%
GGAGTGCGAGTGCGGGTGCG+AGG - chr8_1:61801879-61801898 Msa1205480:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 61801027 61805552 61801027 ID=Msa1205480;Name=Msa1205480
chr8_1 mRNA 61801027 61805552 61801027 ID=Msa1205480-mRNA-1;Parent=Msa1205480;Name=Msa1205480-mRNA-1;_AED=0.05;_eAED=0.05;_QI=158|1|1|1|1|1|2|259|740
chr8_1 exon 61801027 61801792 61801027 ID=Msa1205480-mRNA-1:exon:20055;Parent=Msa1205480-mRNA-1
chr8_1 exon 61803679 61805552 61803679 ID=Msa1205480-mRNA-1:exon:20054;Parent=Msa1205480-mRNA-1
chr8_1 five_prime_UTR 61805395 61805552 61805395 ID=Msa1205480-mRNA-1:five_prime_utr;Parent=Msa1205480-mRNA-1
chr8_1 CDS 61803679 61805394 61803679 ID=Msa1205480-mRNA-1:cds;Parent=Msa1205480-mRNA-1
chr8_1 CDS 61801286 61801792 61801286 ID=Msa1205480-mRNA-1:cds;Parent=Msa1205480-mRNA-1
chr8_1 three_prime_UTR 61801027 61801285 61801027 ID=Msa1205480-mRNA-1:three_prime_utr;Parent=Msa1205480-mRNA-1
Gene Sequence

>Msa1205480

ATGGGTTGTACGGTGAGAGAGAAACACATCAGAGCTAATCGGCGGCCACGATCAACGGCGACGGCGGCGGCGGCAAAACCTGATTCCGATTCATCGGAAATCAAAGATGCGATTTCGAAATCCATAGAGGAATCAGGCCTCAAACCCTTCAAATACGATCTTTCTCGTGTGGATTCTTTGAATTCTCACTGTCTGATCCCTATTCCCAATCCAAACCCTAATTCTGATGAACCTGGTTGGGGCTACTGCACTGAGGAGCAATTGGAGGAGATTTTGTTGAAGAATTTGGAGTTTGTTTACAATGAAGCTGTTTCGAAGATTGTTGCTTTGGGTTATGATGAAGATACGGCGTTGAAAGCGGTTTTGAGGAATGGGCATTGTTATGGTGGGATGGATGTTTTGACGAATATTTTGCATAATTCGTTGGCGTTTTTGAATAGTAATAATGGTGCTTATGTTGGTGTTGGTGTTAATGGTGCTGTTTGTGCTGGTTTTGCTCGTGAGGGTGAGAATATGGATGAGCTTGAACCGGTTTTCGCTGATTTGAAGCATTTGGAGGAGTATTCTTTGGCTGGGATGGTGTGTTTGTTGCAACAGGTTAGGCCGAATTTGAGTAAAGGTGATGCAATGTGGTGTTTGCTAATGAGTGATCTTCATGTTGGGAAAGCTAGTACTATAGAGATTCCTGTGCCTGGGAGTGCGAGTGCGGGTGCGAGGGGAGCTGCTGTTGTTGAATCTGGTGGTGGTGGTGGTAAGGCTCGTACTAAACCGGTTGCTCATAGGTCTTTTCCACCCTGTAAGTTTCATGAGGGGTGGGGATTTGGAAATGGGGATTACCCCACGAATGCAAATGGGATATTGTCTTGTGCTCCGGTTTTGCAGAGGGAGATTGAATTCCCGAAGAGGTTTGATCTTTCTCCGCCAATGAAGTGCTTGTTGAAGAGAAATGTTGCCATGTTTGCTGCTGGTTTTAGAGCAAACACCAAGCAATTGCAGGCGAAGGGGAAGGCCAATGTTCCTGGTCGTAGTGCTGTGTCGAATTTGGATTCTCCGGTTGTATCTGGGGCTGAAACCACGGTTGATACGTGTGGACACTCTCGGGTTGTTGATAACCAAGAGGCTGTGAACTCGGTGCTGAGTAAATTTCGTGACTTGAATCTTGATGAAAATTTGGAGTTTGTGGCTGAGGATCAGAAGGATGAAGTGATAGTGAGTATATTTCATCAGATAAAGGATTTGGAAAAACAGGCCAAGGAGCGGAAAGAATGGGCTTATCAGAAAGCATTGCAGGCTGCGAAGAAGCTAAGCAGTGATTTGACTGAGCTCAAAACATTACGGATGGATAGAGAGGAGACCCAGAAATTGAAGAAAGGGAAACAGGCACTTGAGGACACAACCATGAAGAGACTCTCGGAGATGGAGAATGCTTTGAGAAAGGCTAGTGGTCAAGTGGACCGTGCAAATGGAGCTGTGAGAAGATTAGAGACTGAGAATGCTGAAATCAGAGCAGAGATGGAGGCCTCCAAATTAAGTGCATCAGAGTCGGTGACAGCTTGCTTAGAAGTTGCAAAAAAAGAGAAAAAGTACTTGAAGAAACTTCTAGCTTGGGAAAAACAGAAAGCTAAGCTGCAAAAGGAGATTTCTGATTTGAAAGAGAAGATATTAGAGGATCGAGAAGTGTCAGCTCAGAATAAGCAGCGCCAAAAAGAAGCCGAGGCTAAATGGAAGGAGGAGTTGAAGGCTCAAGAAGATGCCTTGGCACTCGTTGAAGAGGAGCGCCGTTCCAAGGAAGCAGCTGAATCAGATAATAAGAGGGGGTTTGAGGCTTTGCGTCTGAAAATAGAATTAGATTTCCAGCGCCACAAGGATGATCTAAGCAGACTTGAGAATGATCTTTCGCGCCTTAAAGCATCTGTTCGATCTGCTGCATTGCATCACCAAAATACTTCACCCATCAAAGACTTTGAGGGTACAAAGCCTCAAAGAGAGACAATTGCTAAGCTGCTTCTGGATTTGGATGATTTATCAGAAAGTGAAGCTAATAACAACAGAGAATGCATTATATGTATGAAGGATGAAGTCTCCGTTGTTTTCTTGCCGTGTGCTCACCAAGTCATGTGTGCTAAATGCAGTGATGAGTATGGGAAGAATGGTAAGGCTGCTTGTCCTTGCTGCCGAGTTCAAATCCAACAGAGAATCCGTGTATTTGGGGCATGCTCGTAG

Protein sequence

>Msa1205480

MGCTVREKHIRANRRPRSTATAAAAKPDSDSSEIKDAISKSIEESGLKPFKYDLSRVDSLNSHCLIPIPNPNPNSDEPGWGYCTEEQLEEILLKNLEFVYNEAVSKIVALGYDEDTALKAVLRNGHCYGGMDVLTNILHNSLAFLNSNNGAYVGVGVNGAVCAGFAREGENMDELEPVFADLKHLEEYSLAGMVCLLQQVRPNLSKGDAMWCLLMSDLHVGKASTIEIPVPGSASAGARGAAVVESGGGGGKARTKPVAHRSFPPCKFHEGWGFGNGDYPTNANGILSCAPVLQREIEFPKRFDLSPPMKCLLKRNVAMFAAGFRANTKQLQAKGKANVPGRSAVSNLDSPVVSGAETTVDTCGHSRVVDNQEAVNSVLSKFRDLNLDENLEFVAEDQKDEVIVSIFHQIKDLEKQAKERKEWAYQKALQAAKKLSSDLTELKTLRMDREETQKLKKGKQALEDTTMKRLSEMENALRKASGQVDRANGAVRRLETENAEIRAEMEASKLSASESVTACLEVAKKEKKYLKKLLAWEKQKAKLQKEISDLKEKILEDREVSAQNKQRQKEAEAKWKEELKAQEDALALVEEERRSKEAAESDNKRGFEALRLKIELDFQRHKDDLSRLENDLSRLKASVRSAALHHQNTSPIKDFEGTKPQRETIAKLLLDLDDLSESEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKNGKAACPCCRVQIQQRIRVFGACS*